Clone Name	bags31d10
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_473377.1| Oryza sativa (japonica cultivar-group), predic...	373	e-100
2	dbj|AK101961.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
3	dbj|AK102135.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
4	emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4,...	291	9e-76
5	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	291	9e-76
6	emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4,...	291	9e-76
7	gb|AY150521.1| Vitis vinifera putative heterogeneous nuclear rib...	60	6e-06
8	gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, comple...	44	0.36
9	gb|AF030570.1|AF030570 Fusarium venenatum strain BBA64537 RAPD b...	44	0.36
10	gb|AF030569.1|AF030569 Fusarium venenatum strain BBA64478 RAPD b...	44	0.36
11	gb|AF030568.1|AF030568 Fusarium venenatum strain ATCC20334 RAPD ...	44	0.36
12	gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome	42	1.4
13	ref|XM_648552.1| Entamoeba histolytica HM-1:IMSS MmpL efflux pum...	42	1.4
14	emb|Z84488.1|HS93H18 Human DNA sequence from clone RP1-93H18 on ...	42	1.4
15	gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, com...	42	1.4
16	dbj|AK025564.1| Homo sapiens cDNA: FLJ21911 fis, clone HEP03855	42	1.4
17	ref|NM_119310.3| Arabidopsis thaliana REM1 (REPRODUCTIVE MERISTE...	40	5.7
18	gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genom...	40	5.7
19	ref|XM_654338.1| Aspergillus nidulans FGSC A4 hypothetical prote...	40	5.7
20	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	5.7
21	gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosom...	40	5.7
22	gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, comple...	40	5.7
23	ref|XM_721940.1| Plasmodium yoelii yoelii str. 17XNL DNA repair ...	40	5.7
24	ref|XM_722098.1| Plasmodium yoelii yoelii str. 17XNL DEAD-box RN...	40	5.7
25	ref|XM_740049.1| Plasmodium chabaudi chabaudi DNA repair protein...	40	5.7
26	ref|XM_664872.1| Plasmodium berghei strain ANKA hypothetical pro...	40	5.7
27	gb|AC004984.1| Homo sapiens PAC clone RP5-1164K10 from 7, comple...	40	5.7
28	ref|XM_672983.1| Plasmodium berghei strain ANKA DNA repair prote...	40	5.7
29	emb|AL513167.18| Human DNA sequence from clone RP11-79E21 on chr...	40	5.7
30	emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chr...	40	5.7
31	emb|AL354977.10| Human DNA sequence from clone RP11-509J21 on ch...	40	5.7
32	emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC ...	40	5.7
33	emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ...	40	5.7
34	emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, B...	40	5.7
35	gb|BC036936.1| Homo sapiens, clone IMAGE:5242357, mRNA	40	5.7
36	gb|AC010271.8| Homo sapiens chromosome 19 clone CTC-492K19, comp...	40	5.7
37	dbj|AK123900.1| Homo sapiens cDNA FLJ41906 fis, clone PEBLM2006135	40	5.7
38	gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl...	40	5.7
39	gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Ca...	40	5.7
40	gb|AF336344.1| Arabidopsis thaliana reproductive meristem protei...	40	5.7
41	gb|AC023943.6| Homo sapiens chromosome , clone RP11-1G18, comple...	40	5.7
42	emb|BX248091.12| Zebrafish DNA sequence from clone DKEY-257I9, c...	40	5.7
43	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.7
44	gb|BT005002.1| Arabidopsis thaliana clone U20619 unknown protein...	40	5.7
45	gb|BT003891.1| Arabidopsis thaliana clone RAFL15-10-H22 (R20619)...	40	5.7
46	gb|AC116015.16| Homo sapiens chromosome 11, clone RP11-356D19, c...	40	5.7
47	emb|BX842619.1| Neurospora crassa DNA linkage group V cosmid clo...	40	5.7
48	dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	5.7
49	gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complet...	40	5.7
50	dbj|AB043094.1| Drosophila erecta Amy-d gene, 5' flanking region	40	5.7
51	dbj|AB017637.1| Erwinia chrysanthemi pir gene, complete cds	40	5.7

---

>ref|XM_473377.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2325

 Score =  373 bits (188), Expect = e-100
 Identities = 321/366 (87%)
 Strand = Plus / Plus

                                                                       
Query: 54  atatgaaaatgcagatgaagaccatgatgtggacgtggaggacgaagaccatcatgaaat 113
           |||||||||||| || ||||| ||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 480 atatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaat 539

                                                                       
Query: 114 ggtgaaagcacatngcaagaggaaggagtttgaagtttttgttggtgggctagataaaga 173
           ||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 540 ggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaaga 599

                                                                       
Query: 174 tgcaacagaaagtgacctgaggaaggtgttcagtgaagtcggcgagatcactgaagttcg 233
           |||||||||||| || || |||||||| ||  ||||||| ||||||||||||||||||||
Sbjct: 600 tgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcg 659

                                                                       
Query: 234 tttgatgatgaaccctgttaccaagaagaataaaggctttgccttcctgcgatttgagac 293
           ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||
Sbjct: 660 tttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgac 719

                                                                       
Query: 294 cgtggagcaagcaaagcgtgctgtctcagacctgaaaaatncgatggtgcgaggtaaaca 353
            || || ||||||| ||| || || ||||| || || ||| |   |||| |||| |||||
Sbjct: 720 tgtagaacaagcaaggcgggcggtgtcagagctaaagaatccttcggtgagaggcaaaca 779

                                                                       
Query: 354 atgcggtgttgctcctagtcgtgacaacgacacactttttgttggcaatatctgcaagac 413
           ||| |||||||||||||||| ||||||||| || |||||||| |||||||||||||||||
Sbjct: 780 atgtggtgttgctcctagtcatgacaacgatactctttttgtgggcaatatctgcaagac 839

                 
Query: 414 atggac 419
           ||||||
Sbjct: 840 atggac 845

---

>dbj|AK101961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076A11, full
           insert sequence
          Length = 3596

 Score =  373 bits (188), Expect = e-100
 Identities = 321/366 (87%)
 Strand = Plus / Plus

                                                                       
Query: 54  atatgaaaatgcagatgaagaccatgatgtggacgtggaggacgaagaccatcatgaaat 113
           |||||||||||| || ||||| ||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 616 atatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaat 675

                                                                       
Query: 114 ggtgaaagcacatngcaagaggaaggagtttgaagtttttgttggtgggctagataaaga 173
           ||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 676 ggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaaga 735

                                                                       
Query: 174 tgcaacagaaagtgacctgaggaaggtgttcagtgaagtcggcgagatcactgaagttcg 233
           |||||||||||| || || |||||||| ||  ||||||| ||||||||||||||||||||
Sbjct: 736 tgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcg 795

                                                                       
Query: 234 tttgatgatgaaccctgttaccaagaagaataaaggctttgccttcctgcgatttgagac 293
           ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||
Sbjct: 796 tttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgac 855

                                                                       
Query: 294 cgtggagcaagcaaagcgtgctgtctcagacctgaaaaatncgatggtgcgaggtaaaca 353
            || || ||||||| ||| || || ||||| || || ||| |   |||| |||| |||||
Sbjct: 856 tgtagaacaagcaaggcgggcggtgtcagagctaaagaatccttcggtgagaggcaaaca 915

                                                                       
Query: 354 atgcggtgttgctcctagtcgtgacaacgacacactttttgttggcaatatctgcaagac 413
           ||| |||||||||||||||| ||||||||| || |||||||| |||||||||||||||||
Sbjct: 916 atgtggtgttgctcctagtcatgacaacgatactctttttgtgggcaatatctgcaagac 975

                 
Query: 414 atggac 419
           ||||||
Sbjct: 976 atggac 981

---

>dbj|AK102135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085H02, full
           insert sequence
          Length = 2835

 Score =  373 bits (188), Expect = e-100
 Identities = 321/366 (87%)
 Strand = Plus / Plus

                                                                       
Query: 54  atatgaaaatgcagatgaagaccatgatgtggacgtggaggacgaagaccatcatgaaat 113
           |||||||||||| || ||||| ||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 632 atatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaat 691

                                                                       
Query: 114 ggtgaaagcacatngcaagaggaaggagtttgaagtttttgttggtgggctagataaaga 173
           ||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 692 ggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaaga 751

                                                                       
Query: 174 tgcaacagaaagtgacctgaggaaggtgttcagtgaagtcggcgagatcactgaagttcg 233
           |||||||||||| || || |||||||| ||  ||||||| ||||||||||||||||||||
Sbjct: 752 tgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcg 811

                                                                       
Query: 234 tttgatgatgaaccctgttaccaagaagaataaaggctttgccttcctgcgatttgagac 293
           ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||
Sbjct: 812 tttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgac 871

                                                                       
Query: 294 cgtggagcaagcaaagcgtgctgtctcagacctgaaaaatncgatggtgcgaggtaaaca 353
            || || ||||||| ||| || || ||||| || || ||| |   |||| |||| |||||
Sbjct: 872 tgtagaacaagcaaggcgggcggtgtcagagctaaagaatccttcggtgagaggcaaaca 931

                                                                       
Query: 354 atgcggtgttgctcctagtcgtgacaacgacacactttttgttggcaatatctgcaagac 413
           ||| |||||||||||||||| ||||||||| || |||||||| |||||||||||||||||
Sbjct: 932 atgtggtgttgctcctagtcatgacaacgatactctttttgtgggcaatatctgcaagac 991

                 
Query: 414 atggac 419
           ||||||
Sbjct: 992 atggac 997

---

>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08,
              complete sequence
          Length = 140449

 Score =  291 bits (147), Expect = 9e-76
 Identities = 227/254 (89%)
 Strand = Plus / Plus

                                                                          
Query: 54     atatgaaaatgcagatgaagaccatgatgtggacgtggaggacgaagaccatcatgaaat 113
              |||||||||||| || ||||| ||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 117585 atatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaat 117644

                                                                          
Query: 114    ggtgaaagcacatngcaagaggaaggagtttgaagtttttgttggtgggctagataaaga 173
              ||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 117645 ggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaaga 117704

                                                                          
Query: 174    tgcaacagaaagtgacctgaggaaggtgttcagtgaagtcggcgagatcactgaagttcg 233
              |||||||||||| || || |||||||| ||  ||||||| ||||||||||||||||||||
Sbjct: 117705 tgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcg 117764

                                                                          
Query: 234    tttgatgatgaaccctgttaccaagaagaataaaggctttgccttcctgcgatttgagac 293
              ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||
Sbjct: 117765 tttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgac 117824

                            
Query: 294    cgtggagcaagcaa 307
               || || |||||||
Sbjct: 117825 tgtagaacaagcaa 117838



 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                          
Query: 339    ggtgcgaggtaaacaatgcggtgttgctcctagtcgtgacaacgacacactttttgttgg 398
              |||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||| ||
Sbjct: 117952 ggtgagaggcaaacaatgtggtgttgctcctagtcatgacaacgatactctttttgtggg 118011

                                   
Query: 399    caatatctgcaagacatggac 419
              |||||||||||||||||||||
Sbjct: 118012 caatatctgcaagacatggac 118032

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  291 bits (147), Expect = 9e-76
 Identities = 227/254 (89%)
 Strand = Plus / Plus

                                                                            
Query: 54       atatgaaaatgcagatgaagaccatgatgtggacgtggaggacgaagaccatcatgaaat 113
                |||||||||||| || ||||| ||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 27174942 atatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaat 27175001

                                                                            
Query: 114      ggtgaaagcacatngcaagaggaaggagtttgaagtttttgttggtgggctagataaaga 173
                ||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 27175002 ggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaaga 27175061

                                                                            
Query: 174      tgcaacagaaagtgacctgaggaaggtgttcagtgaagtcggcgagatcactgaagttcg 233
                |||||||||||| || || |||||||| ||  ||||||| ||||||||||||||||||||
Sbjct: 27175062 tgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcg 27175121

                                                                            
Query: 234      tttgatgatgaaccctgttaccaagaagaataaaggctttgccttcctgcgatttgagac 293
                ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||
Sbjct: 27175122 tttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgac 27175181

                              
Query: 294      cgtggagcaagcaa 307
                 || || |||||||
Sbjct: 27175182 tgtagaacaagcaa 27175195



 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                            
Query: 339      ggtgcgaggtaaacaatgcggtgttgctcctagtcgtgacaacgacacactttttgttgg 398
                |||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||| ||
Sbjct: 27175309 ggtgagaggcaaacaatgtggtgttgctcctagtcatgacaacgatactctttttgtggg 27175368

                                     
Query: 399      caatatctgcaagacatggac 419
                |||||||||||||||||||||
Sbjct: 27175369 caatatctgcaagacatggac 27175389

---

>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03,
            complete sequence
          Length = 136656

 Score =  291 bits (147), Expect = 9e-76
 Identities = 227/254 (89%)
 Strand = Plus / Plus

                                                                        
Query: 54   atatgaaaatgcagatgaagaccatgatgtggacgtggaggacgaagaccatcatgaaat 113
            |||||||||||| || ||||| ||| ||||||| |||||||| ||||| |||||||||||
Sbjct: 6032 atatgaaaatgccgaagaagagcataatgtggatgtggaggatgaagagcatcatgaaat 6091

                                                                        
Query: 114  ggtgaaagcacatngcaagaggaaggagtttgaagtttttgttggtgggctagataaaga 173
            ||||||||  ||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6092 ggtgaaagagcatcgcaagcggaaggagtttgaagtttttgttggtgggcttgataaaga 6151

                                                                        
Query: 174  tgcaacagaaagtgacctgaggaaggtgttcagtgaagtcggcgagatcactgaagttcg 233
            |||||||||||| || || |||||||| ||  ||||||| ||||||||||||||||||||
Sbjct: 6152 tgcaacagaaagcgatcttaggaaggtttttggtgaagttggcgagatcactgaagttcg 6211

                                                                        
Query: 234  tttgatgatgaaccctgttaccaagaagaataaaggctttgccttcctgcgatttgagac 293
            ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| || |||
Sbjct: 6212 tttgatgatgaaccctgttacaaagaaaaataaaggctttgcctttctgcgatatgcgac 6271

                          
Query: 294  cgtggagcaagcaa 307
             || || |||||||
Sbjct: 6272 tgtagaacaagcaa 6285



 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                        
Query: 339  ggtgcgaggtaaacaatgcggtgttgctcctagtcgtgacaacgacacactttttgttgg 398
            |||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||| ||
Sbjct: 6399 ggtgagaggcaaacaatgtggtgttgctcctagtcatgacaacgatactctttttgtggg 6458

                                 
Query: 399  caatatctgcaagacatggac 419
            |||||||||||||||||||||
Sbjct: 6459 caatatctgcaagacatggac 6479

---

>gb|AY150521.1| Vitis vinifera putative heterogeneous nuclear ribonucleoprotein
           mRNA, partial cds
          Length = 1026

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                         
Query: 134 ggaaggagtttgaagtttttgttggtgggctagataaagatgcaac 179
           |||||||||||||||| |||||||| || ||||| |||||||||||
Sbjct: 83  ggaaggagtttgaagtatttgttgggggtctagacaaagatgcaac 128

---

>gb|AC139351.4| Mus musculus BAC clone RP24-156K15 from 8, complete sequence
          Length = 190998

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 44    agggcgaggaatatgaaaatgc 65
             ||||||||||||||||||||||
Sbjct: 94762 agggcgaggaatatgaaaatgc 94741

---

>gb|AF030570.1|AF030570 Fusarium venenatum strain BBA64537 RAPD band generated using Operon
            primer OPW-15
          Length = 2053

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 34   gatgatgatgagggcgaggaatatgaaaatgcagatgaagac 75
            ||||||||||| | ||||||| ||||| ||| ||||||||||
Sbjct: 1765 gatgatgatgatgacgaggaagatgaagatgaagatgaagac 1724

---

>gb|AF030569.1|AF030569 Fusarium venenatum strain BBA64478 RAPD band generated using Operon
            primer OPW-15
          Length = 2053

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 34   gatgatgatgagggcgaggaatatgaaaatgcagatgaagac 75
            ||||||||||| | ||||||| ||||| ||| ||||||||||
Sbjct: 1765 gatgatgatgatgacgaggaagatgaagatgaagatgaagac 1724

---

>gb|AF030568.1|AF030568 Fusarium venenatum strain ATCC20334 RAPD band generated using Operon
            primer OPW-15
          Length = 2053

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 34   gatgatgatgagggcgaggaatatgaaaatgcagatgaagac 75
            ||||||||||| | ||||||| ||||| ||| ||||||||||
Sbjct: 1765 gatgatgatgatgacgaggaagatgaagatgaagatgaagac 1724

---

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 26     atggcggggatgatgatgagggcga 50
              ||||||||||||| |||||||||||
Sbjct: 382801 atggcggggatgacgatgagggcga 382777

---

>ref|XM_648552.1| Entamoeba histolytica HM-1:IMSS MmpL efflux pump (76.t00008)  partial
            mRNA
          Length = 2523

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   gaatatgaaaatgcagatgaa 72
            |||||||||||||||||||||
Sbjct: 2392 gaatatgaaaatgcagatgaa 2412

---

>emb|Z84488.1|HS93H18 Human DNA sequence from clone RP1-93H18 on chromosome 6q21 Contains the
             3' end of a novel gene, the SART2 gene for squamous cell
             carcinoma antigen recognised by T cell, a chromobox
             homolog 3 (HP1 gamma homolog, Drosophila) (CBX3)
             pseudogene, a keratin 18 (KRT18) pseudogene, a novel gene,
             part of a novel gene and two CpG islands, complete
             sequence
          Length = 160378

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   accatcatgaaatggtgaaag 121
             |||||||||||||||||||||
Sbjct: 94272 accatcatgaaatggtgaaag 94292

---

>gb|AC008758.7| Homo sapiens chromosome 19 clone CTD-3105H18, complete sequence
          Length = 224573

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 128    gcaagaggaaggagtttgaag 148
              |||||||||||||||||||||
Sbjct: 135511 gcaagaggaaggagtttgaag 135531



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   gcaagaggaaggagtttgaag 148
             |||||||||||||||||||||
Sbjct: 96000 gcaagaggaaggagtttgaag 96020

---

>dbj|AK025564.1| Homo sapiens cDNA: FLJ21911 fis, clone HEP03855
          Length = 2233

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 128  gcaagaggaaggagtttgaag 148
            |||||||||||||||||||||
Sbjct: 1143 gcaagaggaaggagtttgaag 1123

---

>ref|NM_119310.3| Arabidopsis thaliana REM1 (REPRODUCTIVE MERISTEM 1); DNA binding /
           transcription factor AT4G31610 (REM1) mRNA, complete cds
          Length = 1999

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gatgatgatgagggcgagga 53
           ||||||||||||||||||||
Sbjct: 595 gatgatgatgagggcgagga 614

---

>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete
             sequence
          Length = 150155

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   agtttgaagtttttgttggt 159
             ||||||||||||||||||||
Sbjct: 93296 agtttgaagtttttgttggt 93315

---

>ref|XM_654338.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1826.2), mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  tgatgatgagggcgaggaat 55
           ||||||||||||||||||||
Sbjct: 279 tgatgatgagggcgaggaat 260

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 140      agtttgaagtttttgttggt 159
                ||||||||||||||||||||
Sbjct: 27211099 agtttgaagtttttgttggt 27211080

---

>gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosome 5, complete sequence
          Length = 168528

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   taaagatgcaacagaaagtg 187
             ||||||||||||||||||||
Sbjct: 93188 taaagatgcaacagaaagtg 93169

---

>gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, complete sequence
          Length = 204913

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     aatatgaaaatgcagatgaa 72
              ||||||||||||||||||||
Sbjct: 168907 aatatgaaaatgcagatgaa 168888

---

>ref|XM_721940.1| Plasmodium yoelii yoelii str. 17XNL DNA repair protein RAD54
            (PY00810) partial mRNA
          Length = 3494

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  agataaagatgcaacagaaa 184
            ||||||||||||||||||||
Sbjct: 1388 agataaagatgcaacagaaa 1407

---

>ref|XM_722098.1| Plasmodium yoelii yoelii str. 17XNL DEAD-box RNA helicase (PY06529)
           partial mRNA
          Length = 1847

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 agataaagatgcaacagaaa 184
           ||||||||||||||||||||
Sbjct: 270 agataaagatgcaacagaaa 289

---

>ref|XM_740049.1| Plasmodium chabaudi chabaudi DNA repair protein rad54 (PC001249.02.0)
            partial mRNA
          Length = 3099

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  agataaagatgcaacagaaa 184
            ||||||||||||||||||||
Sbjct: 1020 agataaagatgcaacagaaa 1039

---

>ref|XM_664872.1| Plasmodium berghei strain ANKA hypothetical protein (PB301416.00.0)
           partial mRNA
          Length = 621

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 agataaagatgcaacagaaa 184
           ||||||||||||||||||||
Sbjct: 222 agataaagatgcaacagaaa 241

---

>gb|AC004984.1| Homo sapiens PAC clone RP5-1164K10 from 7, complete sequence
          Length = 149765

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   agtttgaagtttttgttggt 159
             ||||||||||||||||||||
Sbjct: 71745 agtttgaagtttttgttggt 71726

---

>ref|XM_672983.1| Plasmodium berghei strain ANKA DNA repair protein rad54,
            (PB001043.01.0) partial mRNA
          Length = 2580

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  agataaagatgcaacagaaa 184
            ||||||||||||||||||||
Sbjct: 1020 agataaagatgcaacagaaa 1039

---

>emb|AL513167.18| Human DNA sequence from clone RP11-79E21 on chromosome 9, complete
             sequence
          Length = 69767

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   gataaagatgcaacagaaag 185
             ||||||||||||||||||||
Sbjct: 16448 gataaagatgcaacagaaag 16429

---

>emb|AL513166.7| Human DNA sequence from clone RP11-261J10 on chromosome 1, complete
              sequence
          Length = 170817

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     tatgaaaatgcagatgaaga 74
              ||||||||||||||||||||
Sbjct: 158411 tatgaaaatgcagatgaaga 158392

---

>emb|AL354977.10| Human DNA sequence from clone RP11-509J21 on chromosome 9 Contains the 3'
              end of a novel gene and three novel genes, complete
              sequence
          Length = 163447

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    ctgaggaaggtgttcagtga 209
              ||||||||||||||||||||
Sbjct: 154646 ctgaggaaggtgttcagtga 154665

---

>emb|BX294018.1|NCB8P8 Neurospora crassa DNA linkage group V BAC clone B8P8
          Length = 75910

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    atggcggggatgatgatgag 45
             ||||||||||||||||||||
Sbjct: 68749 atggcggggatgatgatgag 68768

---

>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gatgatgatgagggcgagga 53
             ||||||||||||||||||||
Sbjct: 84124 gatgatgatgagggcgagga 84143

---

>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
             project)
          Length = 90902

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gatgatgatgagggcgagga 53
             ||||||||||||||||||||
Sbjct: 69147 gatgatgatgagggcgagga 69128

---

>gb|BC036936.1| Homo sapiens, clone IMAGE:5242357, mRNA
          Length = 1645

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 ccatcatgaaatggtgaaag 121
           ||||||||||||||||||||
Sbjct: 161 ccatcatgaaatggtgaaag 142

---

>gb|AC010271.8| Homo sapiens chromosome 19 clone CTC-492K19, complete sequence
          Length = 160643

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 128    gcaagaggaaggagtttgaagttt 151
              |||| |||||||||||||||||||
Sbjct: 140405 gcaaaaggaaggagtttgaagttt 140382

---

>dbj|AK123900.1| Homo sapiens cDNA FLJ41906 fis, clone PEBLM2006135
          Length = 2232

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 ccatcatgaaatggtgaaag 121
           ||||||||||||||||||||
Sbjct: 139 ccatcatgaaatggtgaaag 120

---

>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tttgaagtttttgttggtgg 161
             ||||||||||||||||||||
Sbjct: 73181 tttgaagtttttgttggtgg 73200

---

>gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172984

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   ccatcatgaaatggtgaaag 121
             ||||||||||||||||||||
Sbjct: 94259 ccatcatgaaatggtgaaag 94240

---

>gb|AF336344.1| Arabidopsis thaliana reproductive meristem protein 1 (REM1) mRNA,
           complete cds
          Length = 1837

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gatgatgatgagggcgagga 53
           ||||||||||||||||||||
Sbjct: 445 gatgatgatgagggcgagga 464

---

>gb|AC023943.6| Homo sapiens chromosome , clone RP11-1G18, complete sequence
          Length = 153061

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   caagaagaataaaggctttg 274
             ||||||||||||||||||||
Sbjct: 90251 caagaagaataaaggctttg 90270

---

>emb|BX248091.12| Zebrafish DNA sequence from clone DKEY-257I9, complete sequence
          Length = 165075

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    acacactttttgttggcaat 402
              ||||||||||||||||||||
Sbjct: 134047 acacactttttgttggcaat 134028

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 140      agtttgaagtttttgttggt 159
                ||||||||||||||||||||
Sbjct: 27302422 agtttgaagtttttgttggt 27302403

---

>gb|BT005002.1| Arabidopsis thaliana clone U20619 unknown protein (At4g31610) mRNA,
           complete cds
          Length = 1585

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gatgatgatgagggcgagga 53
           ||||||||||||||||||||
Sbjct: 394 gatgatgatgagggcgagga 413

---

>gb|BT003891.1| Arabidopsis thaliana clone RAFL15-10-H22 (R20619) unknown protein
           (At4g31610) mRNA, complete cds
          Length = 2015

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 34  gatgatgatgagggcgagga 53
           ||||||||||||||||||||
Sbjct: 595 gatgatgatgagggcgagga 614

---

>gb|AC116015.16| Homo sapiens chromosome 11, clone RP11-356D19, complete sequence
          Length = 180634

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    caagaagaataaaggctttg 274
              ||||||||||||||||||||
Sbjct: 115707 caagaagaataaaggctttg 115688

---

>emb|BX842619.1| Neurospora crassa DNA linkage group V cosmid clone G11A3
          Length = 37992

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    atggcggggatgatgatgag 45
             ||||||||||||||||||||
Sbjct: 35706 atggcggggatgatgatgag 35687

---

>dbj|AK064988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001D07, full
            insert sequence
          Length = 3566

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 140  agtttgaagtttttgttggt 159
            ||||||||||||||||||||
Sbjct: 2769 agtttgaagtttttgttggt 2750

---

>gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complete sequence
          Length = 218524

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   taaagatgcaacagaaagtg 187
             ||||||||||||||||||||
Sbjct: 24072 taaagatgcaacagaaagtg 24053

---

>dbj|AB043094.1| Drosophila erecta Amy-d gene, 5' flanking region
          Length = 498

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 cactttttgttggcaatatc 405
           ||||||||||||||||||||
Sbjct: 25  cactttttgttggcaatatc 44

---

>dbj|AB017637.1| Erwinia chrysanthemi pir gene, complete cds
          Length = 1437

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  ggacgaagaccatcatgaaa 112
           ||||||||||||||||||||
Sbjct: 345 ggacgaagaccatcatgaaa 326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,175,918
Number of Sequences: 3902068
Number of extensions: 4175918
Number of successful extensions: 79945
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79790
Number of HSP's gapped (non-prelim): 152
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---