>RL3_PLARO (P72233) 50S ribosomal protein L3 (Fragment)|
          Length = 140

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +1

Query: 28  PRSTNQASTDFMRRRV*RKPSVELERRSDDAPNSNIFAVEFPTDDDAGEDVQVVGKTSNQ 207
           PR  N+   D++R+          E R+DDA    I         +AG+ V V GK+  +
Sbjct: 61  PRKVNKPLGDYLRKHEITPRRYFTEIRTDDASEYTIGQEVLADTFEAGQFVDVTGKSKGK 120

Query: 208 G 210
           G
Sbjct: 121 G 121

>PST3_SCHPO (O74755) Paired amphipathic helix protein pst3 (SIN3 homolog 3)|
          Length = 1154

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +1

Query: 16  GIPFPRS---TNQASTDFMRRRV*RKPSVELERRSDDAPNSNIFAVEFPTDDDAGED 177
           GIP PR    TN AS +    +  R    ++  R + A NSN   V F TD+   ED
Sbjct: 758 GIPLPREALETNLASENIESVKKHRDGLSKIFIRPESADNSNNTNVSFQTDETQTED 814

>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 935

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 121 PNSNIFAVEFPTDDD 165
           PN+N + VEFPTDDD
Sbjct: 467 PNANQYKVEFPTDDD 481

>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)|
           (Fibrinogen receptor A)
          Length = 989

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 121 PNSNIFAVEFPTDDD 165
           PN+N + VEFPTDDD
Sbjct: 467 PNANQYKVEFPTDDD 481

>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin|
            phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
            sialoprotein (DSP)]
          Length = 1253

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 19/85 (22%), Positives = 29/85 (34%)
 Frame = +1

Query: 88   SVELERRSDDAPNSNIFAVEFPTDDDAGEDVQVVGKTSNQGDHNGSXXXXXXXXXXXXRS 267
            S +    S+ + NSN       +D     D      +SN GD + S             S
Sbjct: 923  SSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSGDSSNSSDSSDSNSSDSSDS 982

Query: 268  QGDSDNAAHDTGGDLDDNIDNEAHS 342
               SD++      D  D+ D+   S
Sbjct: 983  SNSSDSSDSSDSSDSSDSSDSSNSS 1007

>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/87 (24%), Positives = 33/87 (37%)
 Frame = +1

Query: 82  KPSVELERRSDDAPNSNIFAVEFPTDDDAGEDVQVVGKTSNQGDHNGSXXXXXXXXXXXX 261
           K  + ++ +SDD  +      E   DDD  ED +    +S  GD + S            
Sbjct: 605 KSKLVIQSKSDDDEDDEDDEDEEDDDDDDDEDKE---DSSEDGDSSDSSSDEDSEEGEEN 661

Query: 262 RSQGDSDNAAHDTGGDLDDNIDNEAHS 342
             + D ++   D   D DDN    + S
Sbjct: 662 EDEEDEEDDDEDNEEDDDDNESGSSSS 688


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.131    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,162,951
Number of Sequences: 219361
Number of extensions: 730181
Number of successful extensions: 1649
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)