>YAB9_SCHPO (Q09809) Hypothetical protein C2G11.09 in chromosome I|
          Length = 796

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 19/66 (28%), Positives = 28/66 (42%)
 Frame = +1

Query: 295 PTVKTGFLGCFGSKVDAVEHYTSXXXXXXXXXXXXXXXXVKDPKLVVPAAFVSFRSRWGA 474
           P +KT F G FG K+DA++ Y++                          AF++F S   A
Sbjct: 345 PLIKTHFFGIFGQKIDAIDFYSAKLYKISQQIENARSFDYP----TTGQAFITFESMATA 400

Query: 475 AVCAQT 492
            + AQT
Sbjct: 401 QIVAQT 406

>ARAB_STAES (Q8CRC6) Ribulokinase (EC 2.7.1.16)|
          Length = 536

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 115 DESIGELAEHFFLVNHPDHYLTHQVVYNANKLANLVKEKKKMQNWLDFY 261
           DE    L  H  L  +P  Y+     + A   AN + +  K +NWLD+Y
Sbjct: 98  DEQFEPLHRHEDLKTNPHAYVKLWKHHGAQDEANYMIQMSKNKNWLDYY 146

>ARAB_STAEQ (Q5HLQ6) Ribulokinase (EC 2.7.1.16)|
          Length = 536

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 115 DESIGELAEHFFLVNHPDHYLTHQVVYNANKLANLVKEKKKMQNWLDFY 261
           DE    L  H  L  +P  Y+     + A   AN + +  K +NWLD+Y
Sbjct: 98  DEQFEPLHRHEDLKTNPHAYVKLWKHHGAQDEANYMIQMSKNKNWLDYY 146

>PRTA_PHOLL (Q7N8R3) Secreted alkaline metalloproteinase (EC 3.4.24.-)|
          Length = 480

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 109 DPDESIGELAEHFFLVNHPDHYLTHQVVYNANKLANLVKEKKKMQNWLDFYQLKY-ERNA 285
           D D+S     ++ FL + PD+   H   ++A   A     K  +Q+W D   + + E   
Sbjct: 62  DDDKSKAFQLKYSFLESKPDNMPWHISEFSAFNEAQKAAAKLSIQSWADVANINFVETTD 121

Query: 286 SKRPTVKTGF 315
           +K   V  GF
Sbjct: 122 AKEANVTFGF 131

>SEM3A_RAT (Q63548) Semaphorin-3A precursor (Semaphorin III) (Sema III)|
          Length = 772

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 22/90 (24%), Positives = 40/90 (44%)
 Frame = +1

Query: 43  RFLASEKRRPDQFTVLVRNIPPDPDESIGELAEHFFLVNHPDHYLTHQVVYNANKLANLV 222
           R+  + KRR  +  +  RN   DP     +L  H    NH  H L  +++Y     +  +
Sbjct: 544 RYFPTAKRRTRRQDI--RN--GDPLTHCSDLQHHD---NHHGHSLEERIIYGVENSSTFL 596

Query: 223 KEKKKMQNWLDFYQLKYERNASKRPTVKTG 312
           +   K Q  L ++Q +  RN  ++  ++ G
Sbjct: 597 ECSPKSQRALVYWQFQ-RRNEDRKEEIRVG 625


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,371,284
Number of Sequences: 219361
Number of extensions: 922801
Number of successful extensions: 2650
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2650
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)