ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PIT1_SCHPO (O14132) Sporulation protein kinase pit1 (EC 2.7.11.1) 30 2.7
2KTR2_YEAST (P33550) Probable mannosyltransferase KTR2 (EC 2.4.1.... 29 6.1
3VP91_NPVEP (Q91GH8) Capsid-associated protein Vp91 precursor 29 6.1
45NTD_BOVIN (Q05927) 5'-nucleotidase precursor (EC 3.1.3.5) (Ecto... 29 7.9

>PIT1_SCHPO (O14132) Sporulation protein kinase pit1 (EC 2.7.11.1)|
          Length = 650

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 28  ESCQSIGDASGGSFSSSELNGQPLNDALLDMESSSFGFLSQIPRNFSFSDL 180
           E  Q+ GD  GG +  +EL    L  +L  M    FG L   P N +F+ +
Sbjct: 262 EQSQNTGDKGGGIWDRAELLANKLGISLPKMAPLDFGDLFSPPWNLAFASM 312



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>KTR2_YEAST (P33550) Probable mannosyltransferase KTR2 (EC 2.4.1.131)|
          Length = 425

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
 Frame = +1

Query: 112 LDMESSSFGFLSQ---IPRNFSFSDLTEGFN-----QNTEVLD-NYSRSPFLSSEPNNFS 264
           +DMES++FGF+S    I ++F   D   G+N      N E+ D N+ RS         + 
Sbjct: 274 IDMESNAFGFVSNFDFIGKSFGVIDSNSGYNLCHFWTNFEIGDLNFFRSE-KYIRFFEYL 332

Query: 265 DSTGGEHTER 294
           DS GG + ER
Sbjct: 333 DSKGGFYYER 342



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>VP91_NPVEP (Q91GH8) Capsid-associated protein Vp91 precursor|
          Length = 826

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 100 NDALLDMESSSFGFLSQIPRNFSFSDLTEGFNQN 201
           ND  +DM++S  G    IP+  +  DL + F QN
Sbjct: 423 NDYNIDMQTSIIGLTDMIPKLLAGDDLDDTFGQN 456



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>5NTD_BOVIN (Q05927) 5'-nucleotidase precursor (EC 3.1.3.5)|
           (Ecto-5'-nucleotidase) (5'-NT) (CD73 antigen)
          Length = 574

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
 Frame = +2

Query: 251 QITSQILQVENIQSVYDFCLN--------HVSCCACRLSSYPP 355
           Q T + LQV  I  VYD   N         V C  CR+ SY P
Sbjct: 444 QRTGEFLQVGGIHVVYDISRNPGDRVVKLEVLCTQCRVPSYEP 486


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,394,798
Number of Sequences: 219361
Number of extensions: 1567329
Number of successful extensions: 4198
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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