ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30n09 |
|---|---|
| Clone Library Name | barley_pub |
>ZA15_ENCCU (Q8SUH6) Zinc finger C2H2 protein ECU10_0150| Length = 388 Score = 45.1 bits (105), Expect = 2e-04 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%) Frame = +2 Query: 308 REQEQHKIHFDVNE--WRCGFCKKSFRAEKFIDQHFANRHNN 427 +E+E + + VNE ++CGFC K+F +EKFI HF N+H N Sbjct: 283 KEEELNNMTTIVNENHYKCGFCGKAFESEKFIFNHFNNKHEN 324
>DZIP1_HUMAN (Q86YF9) Zinc finger protein DZIP1 (DAZ-interacting protein 1/2)| Length = 867 Score = 35.0 bits (79), Expect = 0.20 Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 3/95 (3%) Frame = +2 Query: 146 ILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYE---LPSKCRLRPENDMFREQ 316 +LH + T ++H ER R + E + K+ E L +C+ R + Sbjct: 131 LLHSQEFLTSQLHTLEERLRLS-HCDGEQSKKLLTKQAGEIKTLKEECKRRKK---MIST 186 Query: 317 EQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRH 421 +Q I N ++C FC K+F + F+ H RH Sbjct: 187 QQLMIEAKANYYQCHFCDKAFMNQAFLQSHIQRRH 221
>ZN157_HUMAN (P51786) Zinc finger protein 157 (HZF22)| Length = 506 Score = 33.5 bits (75), Expect = 0.57 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +2 Query: 317 EQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 + H+ H + CG C K+FRA+K ++QH Sbjct: 291 QHHRTHTGEKPYECGECGKNFRAKKSLNQH 320
>ZN624_HUMAN (Q9P2J8) Zinc finger protein 624| Length = 739 Score = 33.5 bits (75), Expect = 0.57 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 2/93 (2%) Frame = +2 Query: 134 SGSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCR--LRPENDMF 307 S S I+HQ + HT E +++ I +L E P KC R M Sbjct: 442 SSSLIIHQ-RIHTEEKPYLCNECGESFR-IKSHLTVHQRIHTGEKPYKCTDCERAFTKMV 499 Query: 308 REQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 +E KIH V ++C C KSFR + ++ H Sbjct: 500 NLKEHQKIHTGVKPYKCYDCGKSFRTKSYLIVH 532
>Z379_ENCCU (Q8SW43) Zinc finger C2H2 protein ECU03_0790| Length = 190 Score = 33.1 bits (74), Expect = 0.74 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 16/97 (16%) Frame = +2 Query: 323 HKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQGRCLADLC----------- 469 HK E++CG C K +R + D H + H + + + + + + C Sbjct: 76 HKHQKACLEYKCGICGKRYRKRSWFDVHVESHHVKVFNAPRSKHVCEYCKFEFNKKSNLS 135 Query: 470 ---GALHCDLTMEFKKP--KSKCNDAAAARNRHRCES 565 ++H L FK P K ++A+ R+R +C S Sbjct: 136 THVRSVHL-LMKPFKCPCGKEYAHNASLDRHRKKCAS 171
>ZN225_HUMAN (Q9UK10) Zinc finger protein 225| Length = 706 Score = 32.7 bits (73), Expect = 0.97 Identities = 27/99 (27%), Positives = 43/99 (43%) Frame = +2 Query: 110 SHQELHEASGSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCRLR 289 SHQ++H+ RI KP E C + SR + + L V+ E K + Sbjct: 217 SHQQIHQ----RIHTGEKPFKCE-QCGKGFSRRSGLYVHRKLHTGVKPHICEKCGKAFIH 271 Query: 290 PENDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 + QE +IH ++C C KSFR+ +++H Sbjct: 272 DS----QLQEHQRIHTGEKPFKCDICCKSFRSRANLNRH 306
>CTCF_MOUSE (Q61164) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 736 Score = 32.7 bits (73), Expect = 0.97 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = +2 Query: 233 LMPFVEKEKYELPSKCRLRPENDMFREQEQHKI-----HFDVNEWRCGFCKKSFRAEKFI 397 L+ + K E KC + D QE+H I H + C C K+FR ++ + Sbjct: 482 LIQHQKSHKNEKRFKC---DQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLL 538 Query: 398 DQHFANRHN 424 D HF H+ Sbjct: 539 DMHFKRYHD 547
>TOPI_DROME (Q9VH70) Testis-specific zinc finger protein topi (Protein| matotopetli) Length = 814 Score = 32.7 bits (73), Expect = 0.97 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +2 Query: 314 QEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQ 445 + +IH + C FC K+FR D+H RH++L NS+ Sbjct: 614 KNHQRIHTGEKPYSCLFCTKTFRQRGDRDKHIRARHSHLDANSR 657
>ZN713_HUMAN (Q8N859) Zinc finger protein 713| Length = 430 Score = 32.7 bits (73), Expect = 0.97 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 317 EQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 E H++H + CGFC K+F ++QH Sbjct: 346 EHHRLHTGEKPYECGFCGKAFSQRTHLNQH 375
>CTCF_RAT (Q9R1D1) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 737 Score = 32.7 bits (73), Expect = 0.97 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = +2 Query: 233 LMPFVEKEKYELPSKCRLRPENDMFREQEQHKI-----HFDVNEWRCGFCKKSFRAEKFI 397 L+ + K E KC + D QE+H I H + C C K+FR ++ + Sbjct: 482 LIQHQKSHKNEKRFKC---DQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLL 538 Query: 398 DQHFANRHN 424 D HF H+ Sbjct: 539 DMHFKRYHD 547
>ZN454_HUMAN (Q8N9F8) Zinc finger protein 454| Length = 522 Score = 32.7 bits (73), Expect = 0.97 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%) Frame = +2 Query: 263 ELPSKC----RLRPENDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 E P KC + +N F KIH +RCG C+K+FR + + QH Sbjct: 381 EKPYKCNECGKAFRDNSSFARHR--KIHTGEKPYRCGLCEKAFRDQSALAQH 430
>CTCF_HUMAN (P49711) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 727 Score = 32.7 bits (73), Expect = 0.97 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = +2 Query: 233 LMPFVEKEKYELPSKCRLRPENDMFREQEQHKI-----HFDVNEWRCGFCKKSFRAEKFI 397 L+ + K E KC + D QE+H I H + C C K+FR ++ + Sbjct: 482 LIQHQKSHKNEKRFKC---DQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLL 538 Query: 398 DQHFANRHN 424 D HF H+ Sbjct: 539 DMHFKRYHD 547
>CTCF_CHICK (Q08705) Transcriptional repressor CTCF (CCCTC-binding factor)| (CTCFL paralog) (11-zinc finger protein) Length = 728 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 5/69 (7%) Frame = +2 Query: 233 LMPFVEKEKYELPSKCRLRPENDMFREQEQHKI-----HFDVNEWRCGFCKKSFRAEKFI 397 L+ + K E KC + D QE+H + H + C C K+FR ++ + Sbjct: 482 LIQHQKSHKNEKRFKC---DQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLL 538 Query: 398 DQHFANRHN 424 D HF H+ Sbjct: 539 DMHFKRYHD 547
>PRDM5_MOUSE (Q9CXE0) PR domain zinc finger protein 5 (PR domain-containing| protein 5) Length = 599 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/128 (22%), Positives = 44/128 (34%), Gaps = 10/128 (7%) Frame = +2 Query: 290 PENDMFRE--QEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQGRCLAD 463 P ++ E Q H+ E++C C K F + + +HF ++ C AD Sbjct: 177 PSEEVLTEHLQSLHQKPTGEKEFKCENCGKKFPVRQALQRHFEQHRKACRGEARFVCKAD 236 Query: 464 LCGALHCDLTMEFKKPKSKCNDAAAARNRHR--------CESLADSCFPINQGHSASRLH 619 CG K+ KSK N H C C ++ ++H Sbjct: 237 SCG----------KRLKSKDALRRHQENVHTGDPKRKLICSVCNRKCTSVSSLQEHRKIH 286 Query: 620 EFFLHQFC 643 E F Q C Sbjct: 287 EIFDCQEC 294
>CATV_NPVLD (Q9YMP9) Viral cathepsin (EC 3.4.22.50) (V-cath) (Cysteine| proteinase) (CP) Length = 356 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +2 Query: 305 FREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQ 445 F +EQ+K+ N+ CG C +F ++ FA RHN L+D S+ Sbjct: 148 FDWREQNKVTSIKNQGACGACW-AFATLASVESQFAMRHNRLIDLSE 193
>ZBTB1_MOUSE (Q91VL9) Zinc finger and BTB domain-containing protein 1| Length = 713 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +2 Query: 302 MFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRH 421 +F EQ + H DV+ + CG C F K + H+ +H Sbjct: 670 IFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKH 709
>ZBTB1_HUMAN (Q9Y2K1) Zinc finger and BTB domain-containing protein 1| Length = 713 Score = 32.0 bits (71), Expect = 1.7 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +2 Query: 302 MFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRH 421 +F EQ + H DV+ + CG C F K + H+ +H Sbjct: 670 IFPNNEQLEQHMDVHLYTCGICGAKFNLRKDMRSHYNAKH 709
>VNS2_EHDV2 (P27280) Nonstructural protein NS2| Length = 376 Score = 32.0 bits (71), Expect = 1.7 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 10/118 (8%) Frame = +2 Query: 194 ERSRAAWKAIDEYLMPFVEKEKYELPSKCRLRPENDMFR---EQEQHKIHFDVNEWRCGF 364 +RS+ + + + + EK E P K + E M R +++Q+ VN+W C Sbjct: 148 QRSKYDIRELRQKIREEREKGAVEQPHKPAFKTERGMNRPDSDEDQNPAGGVVNDWTCET 207 Query: 365 CKKSFRAE-------KFIDQHFANRHNNLLDNSQGRCLADLCGALHCDLTMEFKKPKS 517 K+ AE + D ++H+N + +G+ L ++ + T E ++ KS Sbjct: 208 QKRDQEAERREALEIRLADNDRESKHSNWIVRGRGKILKEVKNSFR---TQEVERKKS 262
>SYV_BLOFL (Q7VQT2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 966 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 2/108 (1%) Frame = +2 Query: 329 IHFDVNEWRC--GFCKKSFRAEKFIDQHFANRHNNLLDNSQGRCLADLCGALHCDLTMEF 502 IH+D+++ FC K + KF+ H N H D+ + Sbjct: 640 IHWDMHKLESYHNFCNKLWNVSKFVITHTDN--------------------YHYDIDTKN 679 Query: 503 KKPKSKCNDAAAARNRHRCESLADSCFPINQGHSASRLHEFFLHQFCD 646 KK S + ++ + + + H+ + L+EF HQFCD Sbjct: 680 KKIFSLSDRWITSKLHQTIQKFSQALNDYRFDHTVNILYEFIWHQFCD 727
>PRD13_HUMAN (Q9H4Q3) PR domain zinc finger protein 13 (PR domain-containing| protein 13) Length = 717 Score = 31.6 bits (70), Expect = 2.2 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = +2 Query: 269 PSKCR--LRPENDMFREQEQHKIHFDVNE-WRCGFCKKSFRAEKFIDQHFANRH 421 P KC+ LRP D + ++H + N +RC FC K + +++H +RH Sbjct: 610 PLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRH 663
>ZN445_MOUSE (Q8R2V3) Zinc finger protein 445| Length = 986 Score = 31.6 bits (70), Expect = 2.2 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = +2 Query: 194 ERSRAAWKAIDEYLMPFVEKEKYELPSKCRLRPENDMFREQE--QHKIHFDVNEWRCGFC 367 E SR +W A E+ P +E +CR+ + +R KIH V ++C C Sbjct: 447 ETSRKSWHAHPEHRQPSYSEEGL---FQCRVCGKAFKWRSNRIRHEKIHTGVKPYQCSLC 503 Query: 368 KKSFR 382 +K+F+ Sbjct: 504 EKAFQ 508
>ZN336_HUMAN (Q9H116) Zinc finger protein 336 (Zinc finger and BTB| domain-containing protein 23) Length = 711 Score = 31.2 bits (69), Expect = 2.8 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = +2 Query: 290 PENDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQGRCLADLC 469 PE + E+E + + ++C C+K+F EK +H +RH + RC D C Sbjct: 297 PEEEEEEEEEDEEGEKKKSNFKCSICEKAFLYEKSFLKHSKHRH-GVATEVVYRC--DTC 353 Query: 470 G---ALHCDL 490 G A C+L Sbjct: 354 GQTFANRCNL 363
>EVI1_MOUSE (P14404) Ecotropic virus integration 1 site protein| Length = 1042 Score = 31.2 bits (69), Expect = 2.8 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Frame = +2 Query: 326 KIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQGRC-LADLCGALHCDLTMEF 502 + H +RC +C +SF + +H N HN +C L D C +L Sbjct: 744 RTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNK---EKPFKCHLCDRCFGQQTNLDRHL 800 Query: 503 KKPKSKCNDAAAARNRH 553 KK ++ A + H Sbjct: 801 KKHENGNMSGTATSSPH 817
>ZN511_HUMAN (Q8NB15) Zinc finger protein 511| Length = 262 Score = 31.2 bits (69), Expect = 2.8 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 5/58 (8%) Frame = +2 Query: 311 EQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLD-----NSQGRCLADLC 469 E H +H +V C FCK++F + +D H H++L +CL + C Sbjct: 98 EHHYHTLHGNV----CSFCKRAFPSGHLLDAHILEWHDSLFQILSERQDMYQCLVEGC 151
>YNC3_CAEEL (P34536) Putative zinc finger protein R05D3.3| Length = 421 Score = 31.2 bits (69), Expect = 2.8 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 308 REQEQH-KIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNL 430 R ++ H + H + ++C C + R E F+DQH +H + Sbjct: 219 RNRKNHIEAHLNYRPYKCSACSYARRREIFVDQHIRTQHKGV 260
>ZFP62_HUMAN (Q8NB50) Zinc finger protein 62 homolog (Zfp-62)| Length = 694 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +2 Query: 263 ELPSKCRLRPENDMFREQ-EQHK-IHFDVNEWRCGFCKKSFRAEKFIDQH 406 E P KC + + + R + HK IH ++C +C+KSF ++QH Sbjct: 268 EKPYKCDVCGKAYISRSSLKNHKGIHLGEKPYKCSYCEKSFNYSSALEQH 317
>ZFP62_MOUSE (Q8C827) Zinc finger protein 62 homolog (Zfp-62) (ZT3)| Length = 914 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +2 Query: 263 ELPSKCRLRPENDMFREQ-EQHK-IHFDVNEWRCGFCKKSFRAEKFIDQH 406 E P KC + + + R + HK IH ++C +C+KSF ++QH Sbjct: 464 EKPYKCDVCGKAYISRSSLKNHKGIHMGEKPYKCSYCEKSFNYSSALEQH 513
>SYC_BORGA (Q660S3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 480 Score = 30.8 bits (68), Expect = 3.7 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 8/87 (9%) Frame = +2 Query: 212 WKAIDEYLMPFVEKEK--YELPSKCRLRPENDMFREQEQHKIHFDVN------EWRCGFC 367 W+ I + FV K K + L ++ ++ E H I D N E R C Sbjct: 388 WEVIKSENLGFVSKLKLAFIFDEIISLNLREEILKKSENHNIVIDENMKILLEERRIAKC 447 Query: 368 KKSFRAEKFIDQHFANRHNNLLDNSQG 448 +K+F+ I FA + L+D +G Sbjct: 448 EKNFKRADEIRDFFAKKGFVLIDTKEG 474
>ZN306_HUMAN (Q9BRR0) Zinc finger protein 306 (Zinc finger protein 47 homolog)| (Zfp-47) (Zf47) (Zinc finger and SCAN domain-containing protein 13) Length = 538 Score = 30.8 bits (68), Expect = 3.7 Identities = 22/89 (24%), Positives = 34/89 (38%) Frame = +2 Query: 140 SRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKCRLRPENDMFREQE 319 S +L + HT + + AWK+ E + VE ++C R E Sbjct: 439 SHLLRHQRIHTGDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECE-RSFTQNTGLIE 497 Query: 320 QHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 KIH ++C C K F ++ QH Sbjct: 498 HQKIHTGEKPYQCNACGKGFTRISYLVQH 526
>NPD2_THETN (Q8R984) NAD-dependent deacetylase 2 (EC 3.5.1.-) (Regulatory| protein SIR2 homolog 2) Length = 250 Score = 30.8 bits (68), Expect = 3.7 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 5/81 (6%) Frame = +2 Query: 122 LHEASGSRILHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPSKC-----RL 286 LH+ +GS+ +++ +T E C R + +++ ++E + K E+P +C L Sbjct: 112 LHQKAGSKKVYEVHGNTREGSCLRCGEKVSFELLEE------KVAKEEIPPRCDRCGGML 165 Query: 287 RPENDMFREQEQHKIHFDVNE 349 RP+ +F + H + E Sbjct: 166 RPDVVLFGDPMPHAFDLALKE 186
>DMD_CHICK (P11533) Dystrophin| Length = 3660 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 149 LHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKYELPS 274 L++ KP TH V E A WKAI+ ++ EK + P+ Sbjct: 2385 LYKEKPATHPVKKKLEDLNADWKAINHLILQLKEKPTFGEPA 2426
>ZN189_HUMAN (O75820) Zinc finger protein 189| Length = 626 Score = 30.4 bits (67), Expect = 4.8 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +2 Query: 113 HQELHEASGSRILHQTKPHTHEVHCSRERSRAAWKA-IDEYLMPFVEKEKYELPSKCRLR 289 HQ +H KPH CS +WK+ + E+ ++ Y +KC+ Sbjct: 250 HQRIHTGE--------KPHK----CSDCGKAFSWKSHLIEHQRTHTGEKPYHC-TKCKKS 296 Query: 290 PENDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 + + Q +IH +CG C K+FR ++ QH Sbjct: 297 FSRNSLLVEHQ-RIHTGERPHKCGECGKAFRLSTYLIQH 334
>ZN384_HUMAN (Q8TF68) Zinc finger protein 384 (Nuclear matrix transcription| factor 4) (Nuclear matrix protein 4) (CAG repeat protein 1) (CAS-interacting zinc finger protein) Length = 576 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 320 QH-KIHFDVNEWRCGFCKKSFRAEKFIDQH 406 QH +IH + C FC+KSFR + QH Sbjct: 273 QHIRIHSGAKPYSCNFCEKSFRQLSHLQQH 302
>ZN384_RAT (Q9EQJ4) Zinc finger protein 384 (Nuclear matrix transcription| factor 4) (Nuclear matrix protein 4) (Cas-associated zinc finger protein) Length = 579 Score = 30.4 bits (67), Expect = 4.8 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +2 Query: 320 QH-KIHFDVNEWRCGFCKKSFRAEKFIDQH 406 QH +IH + C FC+KSFR + QH Sbjct: 274 QHIRIHSGAKPYSCNFCEKSFRQLSHLQQH 303
>ZN583_MOUSE (Q3V080) Zinc finger protein 583| Length = 568 Score = 30.0 bits (66), Expect = 6.3 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +2 Query: 263 ELPSKCR-LRPENDMFREQEQH-KIHFDVNEWRCGFCKKSFRAEKFIDQH 406 E P +C+ R + QH ++H + C C+K+F ++DQH Sbjct: 376 ERPYECKECRKSFSQYAHLSQHQRVHTGEKPYECKVCRKAFSQVAYLDQH 425
>KEN_DROME (O77459) Probable transcription factor Ken (Protein Ken and Barbie)| Length = 601 Score = 30.0 bits (66), Expect = 6.3 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 344 NEWRCGFCKKSFRAEKFIDQHFANRHNNLL 433 N + C FC F + + + +H + HNNLL Sbjct: 565 NRYSCCFCSMCFESVQELVRHLSGHHNNLL 594
>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)| Length = 1687 Score = 30.0 bits (66), Expect = 6.3 Identities = 26/108 (24%), Positives = 36/108 (33%), Gaps = 3/108 (2%) Frame = +2 Query: 332 HFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLLDNSQGRCLADLCGALHCD-LTMEFKK 508 H + C C+ F +E + QH RH + G G LHC + Sbjct: 1280 HQGTPAFACSQCEAQFSSETALKQHALRRHPEPAQPAPGSPAETTEGPLHCSRCGLLCPS 1339 Query: 509 PKSKCNDAAAARNRHRCESLADSCFPINQGHSASRLHEFFLH--QFCD 646 P S R C + ++ FP R + F H Q CD Sbjct: 1340 PASLRGHTRKQHPRLECGACQEA-FPSRLALDEHRRQQHFSHRCQLCD 1386
>KEN_DROYA (P60319) Probable transcription factor Ken (Protein Ken and Barbie)| (Fragment) Length = 205 Score = 30.0 bits (66), Expect = 6.3 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 344 NEWRCGFCKKSFRAEKFIDQHFANRHNNLL 433 N + C FC F + + + +H + HNNLL Sbjct: 171 NRYSCCFCSMCFESVQELVRHLSGHHNNLL 200
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 30.0 bits (66), Expect = 6.3 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = +2 Query: 296 NDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHN 424 ND F + + H V ++C C+KSF ++ H H+ Sbjct: 1235 NDTFDLKRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHS 1277
>DZIP1_MOUSE (Q8BMD2) Zinc finger protein DZIP1 (DAZ-interacting protein 1| homolog) Length = 852 Score = 30.0 bits (66), Expect = 6.3 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +2 Query: 266 LPSKCRLRPENDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRH 421 L +C+ R + +Q I + ++C FC K+F + F+ H RH Sbjct: 158 LKEECKRRKK---MLSTQQLMIEAKASYYQCHFCDKAFMNQAFLQSHIQRRH 206
>ZN255_HUMAN (Q9UID9) Zinc finger protein 255 (Bone marrow zinc finger 2)| (BMZF-2) Length = 623 Score = 30.0 bits (66), Expect = 6.3 Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 18/116 (15%) Frame = +2 Query: 113 HQELH--------EASGSRILHQTKPHTHE-VH-------CSRERSRAAWKAIDEYLMPF 244 HQ LH E G R ++ H+H+ VH C +W + + Sbjct: 474 HQRLHSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPYKCDECGKGFSWSSTR---LTH 530 Query: 245 VEKEKYELPSKCRLRPENDMFRE--QEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 + E P KC +N + + Q K+H ++C C K + +D H Sbjct: 531 QRRHSRETPLKCEQHGKNIVQNSFSEVQEKVHSVEKPYKCEDCGKGYNRRLNLDMH 586
>ZN578_HUMAN (Q96N58) Zinc finger protein 578| Length = 365 Score = 29.6 bits (65), Expect = 8.2 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 16/82 (19%) Frame = +2 Query: 263 ELPSKCRL--RPENDMFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH---------- 406 E P KC + N H++H ++C C K+F ++ H Sbjct: 283 EKPYKCNECGKTFNVQSHLSRHHRLHTGEKPYKCKVCDKAFMCHSYLANHTRIHSGEKPY 342 Query: 407 ----FANRHNNLLDNSQGRCLA 460 HN+L+D+S C++ Sbjct: 343 KCNECGKAHNHLIDSSIKPCMS 364
>ZN307_HUMAN (Q969J2) Zinc finger protein 307 (P373c6.1)| Length = 545 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +2 Query: 317 EQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 E HKIH ++C C K+FR + +H Sbjct: 421 EHHKIHTGEKPYQCNMCGKAFRRNSHLLRH 450
>ZN221_HUMAN (Q9UK13) Zinc finger protein 221| Length = 617 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 314 QEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 QE +IH ++C C KSFR +++H Sbjct: 298 QEHQRIHTGEKPFKCDICGKSFRVRSRLNRH 328
>ZNF6_HUMAN (Q9Y462) Zinc finger protein 6| Length = 771 Score = 29.6 bits (65), Expect = 8.2 Identities = 14/35 (40%), Positives = 15/35 (42%) Frame = +2 Query: 329 IHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLL 433 IH RC FCKK FR +QH H L Sbjct: 736 IHTKDYPHRCEFCKKGFRRPSEKNQHIMRHHKEAL 770
>ZN546_HUMAN (Q86UE3) Zinc finger protein 546| Length = 836 Score = 29.6 bits (65), Expect = 8.2 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +2 Query: 317 EQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 E +IH + C C K+FR ++ I QH Sbjct: 346 EHQRIHTGERPYECKVCGKTFRVQRHISQH 375
>ZN524_MOUSE (Q9D0B1) Zinc finger protein 524| Length = 321 Score = 29.6 bits (65), Expect = 8.2 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +2 Query: 269 PSKCRLRPENDMFREQEQ----HKIHFDVNEWRCGFCKKSFRAEKFIDQHFANRHNNLL 433 P +C L P FRE + H+IH ++C C+ F + +H+ +H L+ Sbjct: 164 PFRCVLCPRR--FREAGELAHHHRIHSGERPYQCPSCRVRFTEANTLRRHYKRKHPELV 220
>ZN75A_HUMAN (Q96N20) Zinc finger protein 75A| Length = 296 Score = 29.6 bits (65), Expect = 8.2 Identities = 20/95 (21%), Positives = 42/95 (44%), Gaps = 9/95 (9%) Frame = +2 Query: 149 LHQTKPHTHEVHCSRERSRAAWKAIDEYLMPFVEKEKY----ELPSKCR-----LRPEND 301 +H+ + + + + WK + L+ +++ K E P KC+ R +D Sbjct: 119 MHRVGKWHQDFPVKKRKKLSTWK---QELLKLMDRHKKDCAREKPFKCQECGKTFRVSSD 175 Query: 302 MFREQEQHKIHFDVNEWRCGFCKKSFRAEKFIDQH 406 + + Q +IH + ++C C K FR +++H Sbjct: 176 LIKHQ---RIHTEEKPYKCQQCDKRFRWSSDLNKH 207
>FGD4_MOUSE (Q91ZT5) FYVE, RhoGEF and PH domain-containing protein 4 (Actin| filement-binding protein frabin) (FGD1-related F-actin-binding protein) Length = 766 Score = 29.6 bits (65), Expect = 8.2 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 12/83 (14%) Frame = +2 Query: 389 KFIDQHFANRHNNLLDNSQGR--CLADLCGALHCDLTMEFKK-----PKSKCNDAAAARN 547 KF+ QH + N D +QG+ CLA+ A + E +K P+ AAA+ + Sbjct: 65 KFLPQHSPQKQENDPDQTQGQHGCLANGVVAAQNQMECEDEKETTLSPEMAIQTAAASPD 124 Query: 548 RH-----RCESLADSCFPINQGH 601 H R E++ DS I H Sbjct: 125 THVLNGERNETITDSASSIANSH 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,887,260 Number of Sequences: 219361 Number of extensions: 2105602 Number of successful extensions: 7912 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 6272 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7850 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
