| Clone Name | bags31c05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X62724.1|HVRNPL171 H.vulgare mRNA for ribosomal protein L17-1 Length = 785 Score = 809 bits (408), Expect = 0.0 Identities = 443/450 (98%), Gaps = 5/450 (1%) Strand = Plus / Plus Query: 1 ccatgggccgcgacctgcgtgttcatttcaaggaacactagggaaacagcgtttgccctg 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 98 ccatgggccgcgacctgcgtgttcatttcaag-aacactagggaaacagcgtttgccctg 156 Query: 61 gagggaagatgccgctgnaacaaggctaagaggtaccttgngggatgtgttggcacacaa 120 |||||||||||||| |||||||||||||||||||||| || |||||||||||||||| Sbjct: 157 a--ggaagatgccgctg-aacaaggctaagaggtaccttgagg-atgtgttggcacacaa 212 Query: 121 gcaagccatccccttccggaggtactgccgtggtgttggacgcacggcccaggttaagaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 gcaagccatccccttccggaggtactgccgtggtgttggacgcacggcccaggttaagaa 272 Query: 181 ccgtcagccaaatggtcagggacgctggcctgccaagtctgctaagttcgttctggatct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ccgtcagccaaatggtcagggacgctggcctgccaagtctgctaagttcgttctggatct 332 Query: 241 tctaaagaacgcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tctaaagaacgcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacat 392 Query: 301 ttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatgg 452 Query: 361 acgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 acgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagga 512 Query: 421 agagccggtgaagaaggaggctgagtccca 450 |||||||||||||||||||||||||||||| Sbjct: 513 agagccggtgaagaaggaggctgagtccca 542
>gb|AF264022.1| Poa secunda ribosomal protein L17-1 mRNA, complete cds Length = 808 Score = 555 bits (280), Expect = e-155 Identities = 411/450 (91%), Gaps = 5/450 (1%) Strand = Plus / Plus Query: 1 ccatgggccgcgacctgcgtgttcatttcaaggaacactagggaaacagcgtttgccctg 60 |||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 72 ccatgggccgggacctgcgtgttcatttcaag-aatactagggaaacagcgttcgccctc 130 Query: 61 gagggaagatgccgctgnaacaaggctaagaggtaccttgngggatgtgttggcacacaa 120 |||||||||| ||| |||||||||||||||||||| | || ||||| | |||||||| Sbjct: 131 a--ggaagatgccactg-aacaaggctaagaggtacctggagg-atgtgcttgcacacaa 186 Query: 121 gcaagccatccccttccggaggtactgccgtggtgttggacgcacggcccaggttaagaa 180 ||| |||||||||||||| ||||||||||||||||||||||| || || || | |||||| Sbjct: 187 gcaggccatccccttccgcaggtactgccgtggtgttggacgtaccgctcaagctaagaa 246 Query: 181 ccgtcagccaaatggtcagggacgctggcctgccaagtctgctaagttcgttctggatct 240 ||| ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 247 ccgccagccaaatggtcagggtcgctggcctgccaagtctgctcagtttgttctggatct 306 Query: 241 tctaaagaacgcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacat 300 ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 307 tctcaagaacgcagagagcaatgctgaggtgaaaggtctggatgttgatgctctctacat 366 Query: 301 ttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatgg 360 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 ctcacacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatgg 426 Query: 361 acgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagga 420 |||||| |||||||||||||| ||||| |||||||||||||| |||||||| |||||||| Sbjct: 427 acgcattaacccctacatgtctaacccgtgccacattgagctcatcttgtccgagaagga 486 Query: 421 agagccggtgaagaaggaggctgagtccca 450 ||||| |||||||| |||||||||||||| Sbjct: 487 ggagccagtgaagaaagaggctgagtccca 516
>ref|XM_450351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 325 bits (164), Expect = 7e-86 Identities = 317/367 (86%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 204 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 262 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 263 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 322 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 323 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 382 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 ||||||||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||| Sbjct: 383 atgctgaggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaacc 442 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct: 443 aggcccagaagcagaggcgccgtacctaccgtgctcatggacgcatcaacccttacatgt 502 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||||||||| ||| |||| ||||||||||| || |||||||| ||| Sbjct: 503 cctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaagaaagagc 562 Query: 441 ctgagtc 447 ||||||| Sbjct: 563 ctgagtc 569
>ref|XM_507427.1| PREDICTED Oryza sativa (japonica cultivar-group), P0523B07.46 mRNA Length = 914 Score = 325 bits (164), Expect = 7e-86 Identities = 317/367 (86%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 205 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 263 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 264 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 323 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 324 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 383 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 ||||||||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||| Sbjct: 384 atgctgaggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaacc 443 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct: 444 aggcccagaagcagaggcgccgtacctaccgtgctcatggacgcatcaacccttacatgt 503 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||||||||| ||| |||| ||||||||||| || |||||||| ||| Sbjct: 504 cctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaagaaagagc 563 Query: 441 ctgagtc 447 ||||||| Sbjct: 564 ctgagtc 570
>ref|XM_506642.2| PREDICTED Oryza sativa (japonica cultivar-group), P0523B07.46 mRNA Length = 936 Score = 325 bits (164), Expect = 7e-86 Identities = 317/367 (86%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 191 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 249 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 250 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 309 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 310 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 369 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 ||||||||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||| Sbjct: 370 atgctgaggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaacc 429 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct: 430 aggcccagaagcagaggcgccgtacctaccgtgctcatggacgcatcaacccttacatgt 489 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||||||||| ||| |||| ||||||||||| || |||||||| ||| Sbjct: 490 cctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaagaaagagc 549 Query: 441 ctgagtc 447 ||||||| Sbjct: 550 ctgagtc 556
>dbj|AK120273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E22, full insert sequence Length = 915 Score = 325 bits (164), Expect = 7e-86 Identities = 317/367 (86%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 205 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 263 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 264 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 323 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 324 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 383 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 ||||||||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||| Sbjct: 384 atgctgaggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaacc 443 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct: 444 aggcccagaagcagaggcgccgtacctaccgtgctcatggacgcatcaacccttacatgt 503 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||||||||| ||| |||| ||||||||||| || |||||||| ||| Sbjct: 504 cctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaagaaagagc 563 Query: 441 ctgagtc 447 ||||||| Sbjct: 564 ctgagtc 570
>dbj|AK105087.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A12, full insert sequence Length = 834 Score = 325 bits (164), Expect = 7e-86 Identities = 317/367 (86%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 225 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 283 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 284 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 343 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 344 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 403 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 ||||||||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||| Sbjct: 404 atgctgaggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaacc 463 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct: 464 aggcccagaagcagaggcgccgtacctaccgtgctcatggacgcatcaacccttacatgt 523 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||||||||| ||| |||| ||||||||||| || |||||||| ||| Sbjct: 524 cctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaagaaagagc 583 Query: 441 ctgagtc 447 ||||||| Sbjct: 584 ctgagtc 590
>dbj|AK072488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134I03, full insert sequence Length = 936 Score = 325 bits (164), Expect = 7e-86 Identities = 317/367 (86%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 191 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 249 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 250 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 309 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 310 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 369 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 ||||||||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||| Sbjct: 370 atgctgaggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaacc 429 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||||||| Sbjct: 430 aggcccagaagcagaggcgccgtacctaccgtgctcatggacgcatcaacccttacatgt 489 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||||||||| ||| |||| ||||||||||| || |||||||| ||| Sbjct: 490 cctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaagaaagagc 549 Query: 441 ctgagtc 447 ||||||| Sbjct: 550 ctgagtc 556
>gb|BT017485.1| Zea mays clone EL01N0412G01.c mRNA sequence Length = 640 Score = 319 bits (161), Expect = 4e-84 Identities = 299/345 (86%) Strand = Plus / Plus Query: 103 ggatgtgttggcacacaagcaagccatccccttccggaggtactgccgtggtgttggacg 162 ||||||| | || |||||||| |||||||| ||||| ||||| || |||||||||| || Sbjct: 152 ggatgtgatcgcccacaagcaggccatcccgttccgcaggtattgtggtggtgttgggcg 211 Query: 163 cacggcccaggttaagaaccgtcagccaaatggtcagggacgctggcctgccaagtctgc 222 || || |||| |||| || || |||||||||||||||||||||||||||||||||| Sbjct: 212 tactgctcaggctaagtctcgccactcaaatggtcagggacgctggcctgccaagtctgc 271 Query: 223 taagttcgttctggatcttctaaagaacgcagagagcaatgctgaggtgaaaggtcttga 282 ||| ||| |||| || ||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 272 taaattcattctagaccttctcaagaatgcagagagcaatgctgaggtgaaaggacttga 331 Query: 283 tgtggatgctctctacatttcgcacatccaagtgaaccaggcccagaagcagcggcgcag 342 ||||||| | ||||| | |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 332 tgtggataccctctatgtgtcgcacattcaagttaatcaggctcagaagcagcgacgcag 391 Query: 343 gacctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagct 402 ||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 392 gacataccgtgctcatggacgcatcaacccttacatgtcctccccatgccacatagagct 451 Query: 403 gatcttgtctgagaaggaagagccggtgaagaaggaggctgagtc 447 |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 452 catcttgtcggagaaggaagagccagtgaagaaagaggctgagtc 496
>gb|AY109488.1| Zea mays CL9529_1 mRNA sequence Length = 1024 Score = 311 bits (157), Expect = 1e-81 Identities = 298/345 (86%) Strand = Plus / Minus Query: 103 ggatgtgttggcacacaagcaagccatccccttccggaggtactgccgtggtgttggacg 162 ||||||| | || |||||||| |||||||| ||||| ||||| || | ||||||||||| Sbjct: 771 ggatgtgatcgcccacaagcaggccatcccgttccgcaggtattgtggcggtgttggacg 712 Query: 163 cacggcccaggttaagaaccgtcagccaaatggtcagggacgctggcctgccaagtctgc 222 || || |||| |||| || || |||||||||||||||||||||||| ||||||||| Sbjct: 711 tactgctcaggctaagtctcgccactcaaatggtcagggacgctggcctgtcaagtctgc 652 Query: 223 taagttcgttctggatcttctaaagaacgcagagagcaatgctgaggtgaaaggtcttga 282 ||| ||| |||| || ||||| ||||| |||||||||||||||||||||||||| ||||| Sbjct: 651 taaattcattctagaccttctcaagaatgcagagagcaatgctgaggtgaaaggacttga 592 Query: 283 tgtggatgctctctacatttcgcacatccaagtgaaccaggcccagaagcagcggcgcag 342 ||||||| | ||||| | |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct: 591 tgtggataccctctatgtgtcgcacattcaagttaatcaggctcagaagcagcgacgcag 532 Query: 343 gacctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagct 402 ||| |||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| Sbjct: 531 gacataccgtgctcatggacgcatcaacccttacatgtcctccccatgccacatcgagct 472 Query: 403 gatcttgtctgagaaggaagagccggtgaagaaggaggctgagtc 447 |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 471 catcttgtcggagaaggaagagccagtgaagaaagaggctgagtc 427
>emb|X62725.1|HVRNPL172 H.vulgare mRNA for ribosomal protein L17-2 Length = 854 Score = 280 bits (141), Expect = 4e-72 Identities = 309/364 (84%), Gaps = 1/364 (0%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||||||||||||||||| || |||| | || ||||||||||| || |||||||| | Sbjct: 168 caaggctaagaggtaccttgagg-atgttctcgctcacaagcaagcaattcccttccgta 226 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 | |||||| | ||||| || || || || || || |||||||| ||||||||||| |||| Sbjct: 227 gatactgcagaggtgtgggccgtactgcacaagtaaagaaccgccagccaaatgggcagg 286 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 | ||||||||||| ||||| || ||||||| |||||| | || ||||| || ||||| | Sbjct: 287 gtcgctggcctgcaaagtcggcccagttcgtgctggatttgctgaagaatgctgagagta 346 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 | ||||| || ||||| | ||||| || ||||||||||| |||||||| ||||||| Sbjct: 347 acgctgaagttaaaggcttggatgtcgacaacctctacatttcacacatccaggtgaacc 406 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 | ||||| |||||| ||||| |||| |||||||||||||||||||||||||| ||||||| Sbjct: 407 aagcccaaaagcagaggcgccggacgtaccgtgctcatggacgcatcaacccttacatgt 466 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 467 ccaacccctgccacattgagctgatcttgtcagagaaggaagagcctgtgaagaaggagg 526 Query: 441 ctga 444 |||| Sbjct: 527 ctga 530
>gb|AY103585.1| Zea mays PCO123564 mRNA sequence Length = 1953 Score = 278 bits (140), Expect = 1e-71 Identities = 311/367 (84%), Gaps = 1/367 (0%) Strand = Plus / Minus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| || |||||||||| || ||||| | || |||||||| |||||||| ||||| | Sbjct: 1604 caaggccaaaaggtaccttgagg-atgtgattgcccacaagcaggccatcccgttccgca 1546 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||| || | ||||||||||| || || |||| |||| ||||| ||||||| |||| Sbjct: 1545 ggtattgtggcggtgttggacgtaccgctcaggctaagtctcgtcactcaaatgggcagg 1486 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||| ||| ||||||| ||| |||| || ||||| ||||| || ||||||| Sbjct: 1485 gacgctggcctgtcaaatctgctagattcattctagaccttctcaagaatgctgagagca 1426 Query: 261 atgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacc 320 |||||||||| |||||||||||||| ||| | ||||| | || ||||| |||||||||| Sbjct: 1425 atgctgaggtaaaaggtcttgatgtcgataccctctatgtgtcacacattcaagtgaacc 1366 Query: 321 aggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgt 380 |||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 1365 aggctcagaagcagcggcgcaggacctaccgcgctcatgggcgcatcaacccttacatgt 1306 Query: 381 ccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 || ||| |||||||| || || |||||||| |||||||||||||| |||||||| |||| Sbjct: 1305 cctccccgtgccacatcgaactcatcttgtcagagaaggaagagcccgtgaagaaagagg 1246 Query: 441 ctgagtc 447 ||||||| Sbjct: 1245 ctgagtc 1239
>ref|NM_105410.2| Arabidopsis thaliana structural constituent of ribosome AT1G67430 mRNA, complete cds Length = 713 Score = 214 bits (108), Expect = 2e-52 Identities = 204/236 (86%) Strand = Plus / Plus Query: 191 aatggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaac 250 |||||||| ||||| ||||| |||||||||||| |||| ||||| ||| | || |||||| Sbjct: 267 aatggtcaaggacgttggccagccaagtctgctcagtttgttcttgatttgctcaagaac 326 Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatc 310 || |||||||||||||||||||||||| | ||||| ||||| |||| ||| || |||||| Sbjct: 327 gctgagagcaatgctgaggtgaaaggtttggatgttgatgccctcttcatatcacacatc 386 Query: 311 caagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaac 370 ||||||||||||||| ||||| || | ||||| ||||||||||| ||| | |||||| Sbjct: 387 caagtgaaccaggccgcaaagcaaaggagaaggacttaccgtgctcacggaagaatcaac 446 Query: 371 ccctacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagcc 426 || ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 447 ccttacatgtccaacccatgccacattgagttgattttgtcagagaaggaagagcc 502 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttc 136 |||||| ||||||||||||| ||||||| | || ||||||||||| || |||||| Sbjct: 158 caaggcgaagaggtaccttga-ggatgtgatagctcacaagcaagcaattcccttc 212
>gb|AY081524.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 564 Score = 214 bits (108), Expect = 2e-52 Identities = 204/236 (86%) Strand = Plus / Plus Query: 191 aatggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaac 250 |||||||| ||||| ||||| |||||||||||| |||| ||||| ||| | || |||||| Sbjct: 235 aatggtcaaggacgttggccagccaagtctgctcagtttgttcttgatttgctcaagaac 294 Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatc 310 || |||||||||||||||||||||||| | ||||| ||||| |||| ||| || |||||| Sbjct: 295 gctgagagcaatgctgaggtgaaaggtttggatgttgatgccctcttcatatcacacatc 354 Query: 311 caagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaac 370 ||||||||||||||| ||||| || | ||||| ||||||||||| ||| | |||||| Sbjct: 355 caagtgaaccaggccgcaaagcaaaggagaaggacttaccgtgctcacggaagaatcaac 414 Query: 371 ccctacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagcc 426 || ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 415 ccttacatgtccaacccatgccacattgagttgattttgtcagagaaggaagagcc 470 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttc 136 |||||| ||||||||||||| ||||||| | || ||||||||||| || |||||| Sbjct: 126 caaggcgaagaggtaccttga-ggatgtgatagctcacaagcaagcaattcccttc 180
>gb|AY042862.1| Arabidopsis thaliana ribosomal protein L17-like protein (T1F15.11) mRNA, complete cds Length = 711 Score = 214 bits (108), Expect = 2e-52 Identities = 204/236 (86%) Strand = Plus / Plus Query: 191 aatggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaac 250 |||||||| ||||| ||||| |||||||||||| |||| ||||| ||| | || |||||| Sbjct: 267 aatggtcaaggacgttggccagccaagtctgctcagtttgttcttgatttgctcaagaac 326 Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatc 310 || |||||||||||||||||||||||| | ||||| ||||| |||| ||| || |||||| Sbjct: 327 gctgagagcaatgctgaggtgaaaggtttggatgttgatgccctcttcatatcacacatc 386 Query: 311 caagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaac 370 ||||||||||||||| ||||| || | ||||| ||||||||||| ||| | |||||| Sbjct: 387 caagtgaaccaggccgcaaagcaaaggagaaggacttaccgtgctcacggaagaatcaac 446 Query: 371 ccctacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagcc 426 || ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 447 ccttacatgtccaacccatgccacattgagttgattttgtcagagaaggaagagcc 502 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttc 136 |||||| ||||||||||||| ||||||| | || ||||||||||| || |||||| Sbjct: 158 caaggcgaagaggtaccttga-ggatgtgatagctcacaagcaagcaattcccttc 212
>emb|BX817777.1|CNS0AE81 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 680 Score = 206 bits (104), Expect = 5e-50 Identities = 203/236 (86%) Strand = Plus / Plus Query: 191 aatggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaac 250 |||||||| ||||| ||||| |||||||||||| |||| ||||| ||| | || |||||| Sbjct: 255 aatggtcaaggacgttggccagccaagtctgctcagtttgttcttgatttgctcaagaac 314 Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatc 310 || |||||||||||||||||||||||| | ||||| ||||| |||| ||| || |||||| Sbjct: 315 gctgagagcaatgctgaggtgaaaggtttggatgttgatgccctcttcatatcacacatc 374 Query: 311 caagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaac 370 ||||| ||||||||| ||||| || | ||||| ||||||||||| ||| | |||||| Sbjct: 375 caagttaaccaggccgcaaagcaaaggagaaggacttaccgtgctcacggaagaatcaac 434 Query: 371 ccctacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagcc 426 || ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 435 ccttacatgtccaacccatgccacattgagttgattttgtcagagaaggaagagcc 490
>ref|NM_102503.2| Arabidopsis thaliana structural constituent of ribosome AT1G27400 mRNA, complete cds Length = 826 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 342 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 401 Query: 263 gctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccag 322 |||||||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 402 gctgaggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaaccaa 461 Query: 323 gcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgtcc 382 || || ||| || | ||||| || |||||||||||| | ||||| || |||||||| Sbjct: 462 gcagcaaaacagaggagaaggacatatcgtgctcatggaagaatcaatccttacatgtca 521 Query: 383 aacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaa 435 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||| Sbjct: 522 aacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaagaa 574
>gb|AY077651.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 531 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 247 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 306 Query: 263 gctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccag 322 |||||||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 307 gctgaggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaaccaa 366 Query: 323 gcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgtcc 382 || || ||| || | ||||| || |||||||||||| | ||||| || |||||||| Sbjct: 367 gcagcaaaacagaggagaaggacatatcgtgctcatggaagaatcaatccttacatgtca 426 Query: 383 aacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaa 435 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||| Sbjct: 427 aacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaagaa 479
>gb|AF428449.1|AF428449 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 712 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 282 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 341 Query: 263 gctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccag 322 |||||||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 342 gctgaggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaaccaa 401 Query: 323 gcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgtcc 382 || || ||| || | ||||| || |||||||||||| | ||||| || |||||||| Sbjct: 402 gcagcaaaacagaggagaaggacatatcgtgctcatggaagaatcaatccttacatgtca 461 Query: 383 aacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaa 435 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||| Sbjct: 462 aacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaagaa 514
>gb|AF428271.1|AF428271 Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 762 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 282 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 341 Query: 263 gctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccag 322 |||||||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 342 gctgaggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaaccaa 401 Query: 323 gcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgtcc 382 || || ||| || | ||||| || |||||||||||| | ||||| || |||||||| Sbjct: 402 gcagcaaaacagaggagaaggacatatcgtgctcatggaagaatcaatccttacatgtca 461 Query: 383 aacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaa 435 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||| Sbjct: 462 aacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaagaa 514
>gb|AY037249.1| Arabidopsis thaliana At1g27400/F17L21_20 mRNA, complete cds Length = 767 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 282 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 341 Query: 263 gctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccag 322 |||||||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 342 gctgaggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaaccaa 401 Query: 323 gcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgtcc 382 || || ||| || | ||||| || |||||||||||| | ||||| || |||||||| Sbjct: 402 gcagcaaaacagaggagaaggacatatcgtgctcatggaagaatcaatccttacatgtca 461 Query: 383 aacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaa 435 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||| Sbjct: 462 aacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaagaa 514
>gb|AY088522.1| Arabidopsis thaliana clone 749 mRNA, complete sequence Length = 747 Score = 168 bits (85), Expect = 1e-38 Identities = 196/233 (84%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 342 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 401 Query: 263 gctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccag 322 |||||||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 402 gctgaggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaaccaa 461 Query: 323 gcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctacatgtcc 382 || || ||| || | ||||| || |||||||||||| | ||||| || |||||||| Sbjct: 462 gcagcaaaacagaggagaaggacatatcgtgctcatggaagaatcaatccttacatgtca 521 Query: 383 aacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaagaa 435 |||||||||||||||||| |||| ||||| ||||| |||||||| |||||||| Sbjct: 522 aacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaagaa 574
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 165 bits (83), Expect = 2e-37 Identities = 164/190 (86%), Gaps = 1/190 (0%) Strand = Plus / Minus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 4337693 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 4337635 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 4337634 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 4337575 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 4337574 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 4337515 Query: 261 atgctgaggt 270 |||||||||| Sbjct: 4337514 atgctgaggt 4337505 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 267 aggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccaggccc 326 ||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||||||||| Sbjct: 4337427 aggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaaccaggccc 4337368 Query: 327 agaagcagcggcgcaggacctaccgtgctcatggacgcatcaacc 371 |||||||| ||||| | |||||||||||||||||||||||||||| Sbjct: 4337367 agaagcagaggcgccgtacctaccgtgctcatggacgcatcaacc 4337323 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaag 433 ||||||||| ||| |||||||||||||| ||| |||| ||||||||||| || |||||| Sbjct: 4337240 tacatgtcctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaag 4337181 Query: 434 aaggagg 440 || |||| Sbjct: 4337180 aaagagg 4337174
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 165 bits (83), Expect = 2e-37 Identities = 164/190 (86%), Gaps = 1/190 (0%) Strand = Plus / Minus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 40511 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 40453 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 40452 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 40393 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 40392 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 40333 Query: 261 atgctgaggt 270 |||||||||| Sbjct: 40332 atgctgaggt 40323 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 267 aggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccaggccc 326 ||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||||||||| Sbjct: 40245 aggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaaccaggccc 40186 Query: 327 agaagcagcggcgcaggacctaccgtgctcatggacgcatcaacc 371 |||||||| ||||| | |||||||||||||||||||||||||||| Sbjct: 40185 agaagcagaggcgccgtacctaccgtgctcatggacgcatcaacc 40141 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaag 433 ||||||||| ||| |||||||||||||| ||| |||| ||||||||||| || |||||| Sbjct: 40058 tacatgtcctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaag 39999 Query: 434 aaggagg 440 || |||| Sbjct: 39998 aaagagg 39992
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0523B07 Length = 170510 Score = 165 bits (83), Expect = 2e-37 Identities = 164/190 (86%), Gaps = 1/190 (0%) Strand = Plus / Minus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttccgga 140 |||||| ||||||||||||| || ||||| | || ||||||||||| ||||||||||| | Sbjct: 161452 caaggccaagaggtaccttgagg-atgtgattgcccacaagcaagctatccccttccgta 161394 Query: 141 ggtactgccgtggtgttggacgcacggcccaggttaagaaccgtcagccaaatggtcagg 200 |||||||| |||||||||| ||||| || || | |||| || || |||| ||||||| Sbjct: 161393 ggtactgcggtggtgttggccgcactgctcaagctaagtcacgccattcaaacggtcagg 161334 Query: 201 gacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagca 260 |||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 161333 gacgctggcctgccaagtctgctagattcattctggatcttcttaagaatgcagagagca 161274 Query: 261 atgctgaggt 270 |||||||||| Sbjct: 161273 atgctgaggt 161264 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Minus Query: 267 aggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccaggccc 326 ||||||||||||| ||||| ||| |||| || | || ||||| ||||| |||||||||| Sbjct: 161186 aggtgaaaggtctggatgttgatactctttatgtgtcccacattcaagttaaccaggccc 161127 Query: 327 agaagcagcggcgcaggacctaccgtgctcatggacgcatcaacc 371 |||||||| ||||| | |||||||||||||||||||||||||||| Sbjct: 161126 agaagcagaggcgccgtacctaccgtgctcatggacgcatcaacc 161082 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaag 433 ||||||||| ||| |||||||||||||| ||| |||| ||||||||||| || |||||| Sbjct: 160999 tacatgtcctccccgtgccacattgagcttatcctgtcagagaaggaagaaccagtgaag 160940 Query: 434 aaggagg 440 || |||| Sbjct: 160939 aaagagg 160933
>gb|AF034948.1|AF034948 Zea mays ribosomal protein L17 (rpl17) mRNA, complete cds Length = 746 Score = 153 bits (77), Expect = 6e-34 Identities = 128/145 (88%) Strand = Plus / Plus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| ||||| | |||||||||||||| | Sbjct: 384 tttcacacatccaggtgaaccaagcccagaagcagaggcgccgcacctaccgtgctcacg 443 Query: 360 gacgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagg 419 ||||||| ||||| ||||||||| ||| ||||||||||||||||| |||| ||||||| Sbjct: 444 gacgcattaacccttacatgtcctccccttgccacattgagctgattctgtcagagaagg 503 Query: 420 aagagccggtgaagaaggaggctga 444 ||||||| |||||||| |||||||| Sbjct: 504 aagagcctgtgaagaaagaggctga 528
>ref|XM_483472.1| Oryza sativa (japonica cultivar-group), mRNA Length = 755 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||| Sbjct: 413 tttcacacatccaggtgaaccaagcccagaagcagagacgccggacataccgtgctcatg 472 Query: 360 gacgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagg 419 |||||||||| || ||||||||| || |||||| | ||||| |||||||| ||||||| Sbjct: 473 gacgcatcaatccttacatgtcctcaccctgccacgtcgagcttatcttgtcagagaagg 532 Query: 420 aagagccggtgaagaaggaggctga 444 ||||| | |||||||| ||| |||| Sbjct: 533 aagaggccgtgaagaaagagcctga 557
>dbj|AK120448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100M19, full insert sequence Length = 839 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||| Sbjct: 470 tttcacacatccaggtgaaccaagcccagaagcagagacgccggacataccgtgctcatg 529 Query: 360 gacgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagg 419 |||||||||| || ||||||||| || |||||| | ||||| |||||||| ||||||| Sbjct: 530 gacgcatcaatccttacatgtcctcaccctgccacgtcgagcttatcttgtcagagaagg 589 Query: 420 aagagccggtgaagaaggaggctga 444 ||||| | |||||||| ||| |||| Sbjct: 590 aagaggccgtgaagaaagagcctga 614
>dbj|AK062052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B07, full insert sequence Length = 755 Score = 121 bits (61), Expect = 2e-24 Identities = 124/145 (85%) Strand = Plus / Plus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||| Sbjct: 413 tttcacacatccaggtgaaccaagcccagaagcagagacgccggacataccgtgctcatg 472 Query: 360 gacgcatcaacccctacatgtccaacccatgccacattgagctgatcttgtctgagaagg 419 |||||||||| || ||||||||| || |||||| | ||||| |||||||| ||||||| Sbjct: 473 gacgcatcaatccttacatgtcctcaccctgccacgtcgagcttatcttgtcagagaagg 532 Query: 420 aagagccggtgaagaaggaggctga 444 ||||| | |||||||| ||| |||| Sbjct: 533 aagaggccgtgaagaaagagcctga 557
>gb|AF076975.1|AF076975 Populus alba unknown mRNA, partial cds Length = 578 Score = 121 bits (61), Expect = 2e-24 Identities = 112/129 (86%) Strand = Plus / Plus Query: 206 tggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaatgct 265 ||||||||||||||||| |||||| | |||||| | || ||||| || |||||||||||| Sbjct: 130 tggcctgccaagtctgccaagttcatcctggatttactcaagaatgccgagagcaatgct 189 Query: 266 gaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccaggcc 325 ||||| || ||| | ||||||||||| ||||||||||| |||||||| ||||| ||||| Sbjct: 190 gaggtcaagggtttggatgtggatgcactctacatttctcacatccaggtgaatcaggca 249 Query: 326 cagaagcag 334 ||||||||| Sbjct: 250 cagaagcag 258
>gb|AF307336.1|AF307336 Petunia x hybrida ribosomal protein (PETRP) mRNA, complete cds Length = 819 Score = 107 bits (54), Expect = 3e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 254 gagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaa 313 |||||||||||||| || |||||| | ||||||||| | || || || ||||||||| Sbjct: 329 gagagcaatgctgaagttaaaggtttggatgtggattcactttatataagtcacatccaa 388 Query: 314 gtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccc 373 || ||||| || ||||| ||| ||||| |||| ||||||||||||||| | ||||| ||| Sbjct: 389 gtaaaccaagcacagaaacagaggcgccggacataccgtgctcatggaagaatcaatccc 448 Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaaga 423 |||||||| || || ||||| |||||| |||| |||||||| |||||||| Sbjct: 449 tacatgtctaatccctgccatattgagttgatattgtctgaaaaggaaga 498
>emb|AJ876806.1| Acanthamoeba polyphaga mRNA for putative ribosomal L17-like protein Length = 545 Score = 103 bits (52), Expect = 5e-19 Identities = 127/152 (83%) Strand = Plus / Plus Query: 245 aagaacgcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcg 304 |||||||| |||||||| |||||||| || |||||||||||||| || |||||| ||||| Sbjct: 272 aagaacgccgagagcaacgctgaggtcaagggtcttgatgtggacgccctctacgtttcg 331 Query: 305 cacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgc 364 | || || ||| |||||||||||||| || | ||||||||||| || || || | Sbjct: 332 tgggttcaggtcaacaaggcccagaagcagaggaggaggacctaccgcgcccacggtagg 391 Query: 365 atcaacccctacatgtccaacccatgccacat 396 ||||||||||||||||||||||| |||||||| Sbjct: 392 atcaacccctacatgtccaacccctgccacat 423
>gb|AY496096.1| Capsicum annuum ribosomal protein PETRP mRNA, complete cds Length = 765 Score = 95.6 bits (48), Expect = 1e-16 Identities = 189/236 (80%) Strand = Plus / Plus Query: 189 caaatggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaaga 248 |||||||||| ||||| ||||||| ||| ||||| ||| |||||||| | || || | Sbjct: 277 caaatggtcaaggacgttggcctgtcaaatctgcagggtttattctggatttactcaaaa 336 Query: 249 acgcagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcaca 308 | || ||||||||||||||||| ||||| | ||||||||| | || | ||| || |||| Sbjct: 337 atgctgagagcaatgctgaggttaaaggcttggatgtggattcacttttcatatctcaca 396 Query: 309 tccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatca 368 ||||||| |||||||| || || ||| ||||| | || ||||| || || ||| | || | Sbjct: 397 tccaagtaaaccaggcacaaaaacagaggcgccgcacataccgagcacacggaagaatta 456 Query: 369 acccctacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagag 424 ||||||| ||||| |||| ||||| |||||| || | |||||||||||||||||| Sbjct: 457 acccctatatgtctcacccttgccatattgagttggtattgtctgagaaggaagag 512
>ref|XM_323004.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L17 [MIPS] (NCU03703.1) partial mRNA Length = 585 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| || |||||||||| |||||||| ||| | || ||||| ||||| || || Sbjct: 369 gcacatccaggtcaaccaggcccccaagcagcgccgccgcacttaccgcgctcacggtcg 428 Query: 364 catcaacccctacatgtccaacccatgccacattgagct 402 |||||||||||||||||||||||| |||||||| ||||| Sbjct: 429 catcaacccctacatgtccaacccctgccacatcgagct 467
>ref|XM_956386.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L17 [MIPS] (NCU03703.1) partial mRNA Length = 585 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| || |||||||||| |||||||| ||| | || ||||| ||||| || || Sbjct: 369 gcacatccaggtcaaccaggcccccaagcagcgccgccgcacttaccgcgctcacggtcg 428 Query: 364 catcaacccctacatgtccaacccatgccacattgagct 402 |||||||||||||||||||||||| |||||||| ||||| Sbjct: 429 catcaacccctacatgtccaacccctgccacatcgagct 467
>ref|XM_382047.1| Gibberella zeae PH-1 chromosome 1 RL17_NEUCR 60S ribosomal protein L17 (FG01871.1) partial mRNA Length = 558 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| || |||||||||| |||||||| || ||||| ||||||||||| || || Sbjct: 345 gcacatccaggtcaaccaggcccccaagcagcgacgaaggacataccgtgctcacggtcg 404 Query: 364 catcaacccctacatgtccaacccatgccacattgagct 402 |||||||| |||||||||||||| |||||||| ||||| Sbjct: 405 tatcaacccttacatgtccaacccctgccacatcgagct 443
>gb|DQ207869.1| Solanum tuberosum clone 086A10 ribosomal protein PETRP-like mRNA, complete cds Length = 729 Score = 85.7 bits (43), Expect = 1e-13 Identities = 139/171 (81%) Strand = Plus / Plus Query: 254 gagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaa 313 |||||||| ||||||||||||||| | ||||||||| | || || || || ||||||||| Sbjct: 328 gagagcaacgctgaggtgaaaggtttggatgtggattcactttatatatctcacatccaa 387 Query: 314 gtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccc 373 ||||| | || || || ||| | || | ||||||||||| |||||| | || |||||| Sbjct: 388 gtgaatgaagctcaaaaacagagacgtcgtacctaccgtgcacatggaagaattaacccc 447 Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagag 424 || ||||| |||| ||||| |||||| |||| || ||||||||||||||| Sbjct: 448 tatatgtctcacccctgccatattgagttgattttatctgagaaggaagag 498
>gb|DQ252494.1| Solanum tuberosum clone 063E12 ribosomal protein PETRP-like mRNA, complete cds Length = 760 Score = 85.7 bits (43), Expect = 1e-13 Identities = 139/171 (81%) Strand = Plus / Plus Query: 254 gagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaa 313 |||||||| ||||||||||||||| | ||||||||| | || || || || ||||||||| Sbjct: 339 gagagcaacgctgaggtgaaaggtttggatgtggattcactttatatatctcacatccaa 398 Query: 314 gtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccc 373 ||||| | || || || ||| |||| | ||||||||||| || ||| | || |||||| Sbjct: 399 gtgaatgaagctcaaaaacagaggcgtcgtacctaccgtgcacacggaagaattaacccc 458 Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagag 424 || ||||| |||| ||||| |||||| |||| || ||||||||||||||| Sbjct: 459 tatatgtctcacccctgccatattgagttgattttatctgagaaggaagag 509
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||| Sbjct: 26399529 tttcacacatccaggtgaaccaagcccagaagcagagacgccggacataccgtgctcatg 26399470 Query: 360 gacgcatcaa 369 |||||||||| Sbjct: 26399469 gacgcatcaa 26399460 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 389 tgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 |||||| | ||||| |||||||| |||||||||||| | |||||||| |||| Sbjct: 26399370 tgccacgtcgagcttatcttgtcagagaaggaagaggccgtgaagaaagagg 26399319
>gb|AC004393.2|T1F15 Arabidopsis thaliana chromosome 1 BAC T1F15 sequence, complete sequence Length = 60066 Score = 83.8 bits (42), Expect = 5e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 191 aatggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaac 250 |||||||| ||||| ||||| |||||||||||| |||| ||||| ||| | || |||||| Sbjct: 44320 aatggtcaaggacgttggccagccaagtctgctcagtttgttcttgatttgctcaagaac 44261 Query: 251 gcagagagcaatgctgaggtga 272 || ||||||||||||||||||| Sbjct: 44260 gctgagagcaatgctgaggtga 44239 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagcc 426 ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 43961 tacatgtccaacccatgccacattgagttgattttgtcagagaaggaagagcc 43909 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Minus Query: 267 aggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaaccaggccc 326 ||||||||||| | ||||| ||||| |||| ||| || ||||||||||||||||||||| Sbjct: 44152 aggtgaaaggtttggatgttgatgccctcttcatatcacacatccaagtgaaccaggccg 44093 Query: 327 agaagcagcggcgcaggacctaccgtgctcatggacgcatcaacc 371 ||||| || | ||||| ||||||||||| ||| | ||||||| Sbjct: 44092 caaagcaaaggagaaggacttaccgtgctcacggaagaatcaacc 44048 Score = 42.1 bits (21), Expect = 1.5 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 81 caaggctaagaggtaccttgngggatgtgttggcacacaagcaagccatccccttc 136 |||||| ||||||||||||| ||||||| | || ||||||||||| || |||||| Sbjct: 44429 caaggcgaagaggtaccttga-ggatgtgatagctcacaagcaagcaattcccttc 44375
>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1789_C07 Length = 138944 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||| Sbjct: 49081 tttcacacatccaggtgaaccaagcccagaagcagagacgccggacataccgtgctcatg 49022 Query: 360 gacgcatcaa 369 |||||||||| Sbjct: 49021 gacgcatcaa 49012 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 389 tgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 |||||| | ||||| |||||||| |||||||||||| | |||||||| |||| Sbjct: 48922 tgccacgtcgagcttatcttgtcagagaaggaagaggccgtgaagaaagagg 48871
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 300 tttcgcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatg 359 |||| |||||||| |||||||| |||||||||||| | ||| |||| ||||||||||||| Sbjct: 129110 tttcacacatccaggtgaaccaagcccagaagcagagacgccggacataccgtgctcatg 129051 Query: 360 gacgcatcaa 369 |||||||||| Sbjct: 129050 gacgcatcaa 129041 Score = 48.1 bits (24), Expect = 0.025 Identities = 45/52 (86%) Strand = Plus / Minus Query: 389 tgccacattgagctgatcttgtctgagaaggaagagccggtgaagaaggagg 440 |||||| | ||||| |||||||| |||||||||||| | |||||||| |||| Sbjct: 128951 tgccacgtcgagcttatcttgtcagagaaggaagaggccgtgaagaaagagg 128900
>gb|DQ235197.1| Solanum tuberosum clone 168G07 ribosomal protein PETRP-like mRNA, complete cds Length = 774 Score = 79.8 bits (40), Expect = 7e-12 Identities = 136/168 (80%) Strand = Plus / Plus Query: 257 agcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtg 316 ||||||||||||||||||||| | ||||||||| | || || || || |||||||||||| Sbjct: 336 agcaatgctgaggtgaaaggtttggatgtggattcactttatatatctcacatccaagtg 395 Query: 317 aaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgcatcaacccctac 376 || | || || || ||| |||| | ||||||||||| || ||| | || |||||||| Sbjct: 396 aatgaagctcaaaaacagaggcgtcgtacctaccgtgcacacggaagaattaacccctat 455 Query: 377 atgtccaacccatgccacattgagctgatcttgtctgagaaggaagag 424 ||||| |||| ||||| |||||| |||| || || |||||||||||| Sbjct: 456 atgtctcacccctgccatattgagttgattttatccgagaaggaagag 503
>gb|AY853172.1| Pectinaria gouldii ribosomal protein L17 mRNA, complete cds Length = 666 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 341 aggacctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgag 400 ||||||||| | |||||||| |||||||||||||||||| || |||||||||||||||| Sbjct: 410 aggacctacagggctcatggtcgcatcaacccctacatgagcagcccatgccacattgag 469 Query: 401 ctg 403 ||| Sbjct: 470 ctg 472 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 239 cttctaaagaacgcagagagcaatgctgag 268 ||||| |||||||| ||||||||||||||| Sbjct: 308 cttctgaagaacgctgagagcaatgctgag 337
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 374 tacatgtccaacccatgccacattgagctgatcttgtctgagaaggaagagccggtgaag 433 |||||||| |||||||||||||||||| |||| ||||| ||||| |||||||| |||||| Sbjct: 60399 tacatgtcaaacccatgccacattgagttgattttgtcagagaaagaagagcctgtgaag 60458 Query: 434 aaggagg 440 || |||| Sbjct: 60459 aaagagg 60465 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 203 cgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacgcagagagcaat 262 ||||||||||| || |||||| | |||||||| |||||||| ||||| || ||||||||| Sbjct: 60054 cgctggcctgctaaatctgctcaattcgttcttgatcttctcaagaatgctgagagcaat 60113 Query: 263 gctgaggt 270 |||||||| Sbjct: 60114 gctgaggt 60121 Score = 46.1 bits (23), Expect = 0.098 Identities = 47/55 (85%) Strand = Plus / Plus Query: 267 aggtgaaaggtcttgatgtggatgctctctacatttcgcacatccaagtgaacca 321 |||| |||||| | ||||| ||||| || | |||||| ||||||||||||||||| Sbjct: 60202 aggtcaaaggtttggatgtcgatgcccttttcatttctcacatccaagtgaacca 60256
>ref|XM_747718.1| Aspergillus fumigatus Af293 60s ribosomal protein yL17-b (Afu1g14410) partial mRNA Length = 585 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagct 402 |||||||||||||| || || ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 406 acctaccgtgctcacggtcgtatcaacccctacatgaccaacccctgccacatcgagct 464
>dbj|AB226154.1| Aspergillus oryzae cDNA, contig sequence: AoEST3012 Length = 1075 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagct 402 |||||||||||||| || || ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 443 acctaccgtgctcacggtcgtatcaacccctacatgaccaacccttgccacatcgagct 501
>gb|AY389972.1| Xenopus laevis ribosomal protein L17 mRNA, partial cds Length = 472 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 ||||||||||||||||| |||||||||||||||||| | |||||||||||| || || Sbjct: 359 acctaccgtgctcatggtcgcatcaacccctacatgagctccccatgccacatcgaaatg 418 Query: 404 atcttgtctgagaaggaa 421 ||| | ||||||||||| Sbjct: 419 atccttactgagaaggaa 436
>gb|BC043971.1| Xenopus laevis similar to ribosomal protein L17, mRNA (cDNA clone IMAGE:5571114), partial cds Length = 627 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 ||||||||||||||||| |||||||||||||||||| | |||||||||||| || || Sbjct: 396 acctaccgtgctcatggtcgcatcaacccctacatgagctccccatgccacatcgaaatg 455 Query: 404 atcttgtctgagaaggaa 421 ||| | ||||||||||| Sbjct: 456 atccttactgagaaggaa 473
>gb|AF401571.1| Ictalurus punctatus ribosomal protein L17 mRNA, complete cds Length = 600 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 ||||||||||| || ||||||||||||||||||||| | ||| |||||||||||| || Sbjct: 401 acctaccgtgcccacggacgcatcaacccctacatgagctccccctgccacattgagatg 460 Query: 404 atcttgtctgagaaggaa 421 ||| | ||||||||||| Sbjct: 461 atcctcactgagaaggaa 478
>gb|BC053781.1| Xenopus laevis cDNA clone IMAGE:6876276, containing frame-shift errors Length = 651 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacat 396 ||||||||||||||||| |||||||||||||||||| | |||||||||||| Sbjct: 415 acctaccgtgctcatggtcgcatcaacccctacatgagctccccatgccacat 467
>gb|BC055097.1| Danio rerio zgc:65996, mRNA (cDNA clone MGC:65996 IMAGE:6792826), complete cds Length = 636 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| |||||| |||||| ||| |||||| | |||||||| ||||| ||||| Sbjct: 353 gcacatccaggtgaacaaggccccaaagatgcggcgacgtacctaccgcgctcacggacg 412 Query: 364 catcaacccctacatg 379 |||||||||||||||| Sbjct: 413 catcaacccctacatg 428
>ref|XM_653288.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0776.2), mRNA Length = 555 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 |||||||||||||| || || |||||||| |||||| ||||||| |||||||| ||||| Sbjct: 385 acctaccgtgctcacggtcgtatcaacccttacatgaccaacccctgccacatcgagctc 444 Query: 404 atcttgtctgag 415 ||| || ||||| Sbjct: 445 atcctgactgag 456
>ref|NM_212760.1| Danio rerio zgc:65996 (zgc:65996), mRNA Length = 636 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| |||||| |||||| ||| |||||| | |||||||| ||||| ||||| Sbjct: 353 gcacatccaggtgaacaaggccccaaagatgcggcgacgtacctaccgcgctcacggacg 412 Query: 364 catcaacccctacatg 379 |||||||||||||||| Sbjct: 413 catcaacccctacatg 428
>ref|XM_866977.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), transcript variant 3 (LOC534195), mRNA Length = 643 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 380 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 439 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 440 gatcaacccctacatgagctctccatgccacattgagatgatc 482
>ref|XM_613874.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), transcript variant 1 (LOC534195), mRNA Length = 548 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 302 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 361 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 362 gatcaacccctacatgagctctccatgccacattgagatgatc 404
>ref|XM_879331.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), transcript variant 4 (LOC534195), mRNA Length = 515 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 269 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 328 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 329 gatcaacccctacatgagctctccatgccacattgagatgatc 371
>gb|BC102600.1| Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI), mRNA (cDNA clone MGC:128012 IMAGE:30957113), complete cds Length = 642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 386 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 445 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 446 gatcaacccctacatgagctctccatgccacattgagatgatc 488
>dbj|AB099057.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS13090 Length = 608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 368 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 427 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 428 gatcaacccctacatgagctctccatgccacattgagatgatc 470
>dbj|AB099047.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS12904 Length = 615 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 367 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 426 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 427 gatcaacccctacatgagctctccatgccacattgagatgatc 469
>dbj|AB099021.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS12459 Length = 509 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 281 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 340 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 341 gatcaacccctacatgagctctccatgccacattgagatgatc 383
>dbj|AB098996.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS11762 Length = 586 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 372 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 431 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 432 gatcaacccctacatgagctctccatgccacattgagatgatc 474
>dbj|AB098987.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS11689 Length = 567 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 352 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 411 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 412 gatcaacccctacatgagctctccatgccacattgagatgatc 454
>dbj|AB098888.1| Bos taurus mRNA for similar to ribosomal protein L17, partial cds, clone: ORCS10039 Length = 589 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 364 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 423 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 424 gatcaacccctacatgagctctccatgccacattgagatgatc 466
>ref|NM_001034459.1| Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (MGC128012), mRNA Length = 642 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 386 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 445 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 446 gatcaacccctacatgagctctccatgccacattgagatgatc 488
>gb|AF443188.1| Paracoccidioides brasiliensis sorbitol dehydrogenase (SOR1) gene; hydroxyacid dehydrogenase protein Ynl274c (YNL274c) gene; and 60S ribosomal protein Rpl17A (RPL17A) gene, partial cds Length = 6361 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 365 atcaacccctacatgtccaacccatgccacattgagct 402 ||||||||||||||||||| |||||||||||| ||||| Sbjct: 6323 atcaacccctacatgtccagcccatgccacatcgagct 6360
>emb|AL451014.1|NCB9B15 Neurospora crassa DNA linkage group V BAC clone B9B15 Length = 81650 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 365 atcaacccctacatgtccaacccatgccacattgagct 402 ||||||||||||||||||||||| |||||||| ||||| Sbjct: 76759 atcaacccctacatgtccaacccctgccacatcgagct 76796
>gb|DQ066273.1| Ixodes scapularis isolate is-all-clu554 ribosomal protein L17 mRNA, complete cds Length = 558 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 305 cacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacgc 364 ||||||||||| |||| ||||| ||| ||| | ||||||||||| || || |||||| Sbjct: 346 cacatccaagtcaaccgggcccccaagatgcgcaggaggacctaccgcgcccacggacgc 405 Query: 365 atcaacccctacatgtccaacccatgccacattgagctgatc 406 |||||||| |||||| || ||| |||||||||||| ||||| Sbjct: 406 atcaacccgtacatgagcagcccgtgccacattgaggtgatc 447
>gb|BC077192.1| Xenopus laevis MGC78885 protein, mRNA (cDNA clone MGC:78885 IMAGE:4174034), complete cds Length = 678 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatg 379 |||||||| |||||||| |||||||||||||||||| Sbjct: 408 acctaccgcgctcatggtcgcatcaacccctacatg 443
>gb|BC049299.1| Danio rerio cDNA clone IMAGE:5914772, **** WARNING: chimeric clone **** Length = 1854 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatg 379 |||||||| ||||| ||||||||||||||||||||| Sbjct: 1637 acctaccgcgctcacggacgcatcaacccctacatg 1672
>ref|XM_680042.1| PREDICTED: Danio rerio similar to Ribosomal protein L17 (LOC572750), mRNA Length = 631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatg 379 |||||||| ||||| ||||||||||||||||||||| Sbjct: 427 acctaccgcgctcacggacgcatcaacccctacatg 462
>emb|BX000991.8| Zebrafish DNA sequence from clone CH211-203L7 in linkage group 6, complete sequence Length = 170966 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 344 acctaccgtgctcatggacgcatcaacccctacatg 379 |||||||| ||||| ||||||||||||||||||||| Sbjct: 122008 acctaccgcgctcacggacgcatcaacccctacatg 121973 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 aagaacgcagagagcaatgctgag 268 ||||||||||| |||||||||||| Sbjct: 122255 aagaacgcagaaagcaatgctgag 122232
>emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 in linkage group 21, complete sequence Length = 169747 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 344 acctaccgtgctcatggacgcatcaacccctacatg 379 |||||||| ||||| ||||||||||||||||||||| Sbjct: 5535 acctaccgcgctcacggacgcatcaacccctacatg 5500 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 aagaacgcagagagcaatgctgag 268 ||||||||||| |||||||||||| Sbjct: 5782 aagaacgcagaaagcaatgctgag 5759
>gb|AY769286.1| Bombyx mori ribosomal protein L17 (RpL17) mRNA, complete cds Length = 620 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 ||||||||||| || |||||||||||||||||||| Sbjct: 403 taccgtgctcacggtcgcatcaacccctacatgtc 437
>ref|XM_599030.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (LOC520780), mRNA Length = 500 Score = 54.0 bits (27), Expect = 4e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| | | |||||||||||| ||| | ||||| || || Sbjct: 252 gcacatccaagtgaacaaagcccccaggatgcggcgcaggacttacagagctcacggtcg 311 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||||||| | ||||||||||||||| ||||| Sbjct: 312 gatcaacccctacatgagctctccatgccacattgagatgatc 354
>ref|XM_869475.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC617250), mRNA Length = 483 Score = 54.0 bits (27), Expect = 4e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 237 gcacatccaagtgaacaaagcccccaagacgcggcgcaggacttacagagctcacggtcg 296 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatc 406 |||| |||||||||| | ||| |||||||||||| ||||| Sbjct: 297 gatcagcccctacatgagctccccctgccacattgagatgatc 339
>gb|AY310814.1| Nicotiana benthamiana clone 12-173 unknown mRNA Length = 202 Score = 54.0 bits (27), Expect = 4e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 192 atggtcagggacgctggcctgccaagtctgctaagttcgttctggatcttctaaagaacg 251 ||||||| | ||||||||||| ||| ||||| || | |||| ||| | || ||||| | Sbjct: 28 atggtcaagaacgctggcctgtcaaatctgcaaaaattattcttgatttactcaagaatg 87 Query: 252 cagagagcaatgctgaggtgaaaggtcttgatgtggatgctctctacatttcgcacatcc 311 | ||||||||||||||||| ||||| | ||||||||| | || | ||| || ||||||| Sbjct: 88 ctgagagcaatgctgaggttaaaggcttggatgtggattcacttttcatatctcacatcc 147 Query: 312 aagtgaa 318 ||||||| Sbjct: 148 aagtgaa 154
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 365 atcaacccctacatgtccaacccatgccacattgagct 402 ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 202012 atcaacccctacatgaccaacccctgccacatcgagct 202049
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 365 atcaacccctacatgtccaacccatgccacattgagct 402 ||||||||||||||| ||||||| |||||||| ||||| Sbjct: 944475 atcaacccctacatgaccaacccttgccacatcgagct 944438
>emb|AL115613.1|CNS01CJP Botrytis cinerea strain T4 cDNA library Length = 720 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 369 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 428 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 429 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 474
>emb|AL114989.1|CNS01C2D Botrytis cinerea strain T4 cDNA library Length = 420 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 93 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 152 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 153 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 198
>emb|AL114758.1|CNS01BVY Botrytis cinerea strain T4 cDNA library Length = 840 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 355 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 414 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 415 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 460
>emb|AL114552.1|CNS01BQ8 Botrytis cinerea strain T4 cDNA library Length = 456 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 95 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 154 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 155 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 200
>emb|AL113871.1|CNS01B7B Botrytis cinerea strain T4 cDNA library Length = 600 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 266 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 325 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 326 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 371
>emb|AL113217.1|CNS01AP5 Botrytis cinerea strain T4 cDNA library Length = 516 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 181 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 240 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 241 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 286
>emb|AL113064.1|CNS01AKW Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 349 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 408 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 409 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 454
>emb|AL112375.1|CNS01A1R Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 375 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 434 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 435 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 480
>emb|AL112009.1|CNS019RL Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 396 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 455 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 456 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 501
>emb|AL111981.1|CNS019QT Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 267 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 326 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 327 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 372
>emb|AL111483.1|CNS019CZ Botrytis cinerea strain T4 cDNA library Length = 696 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 356 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 415 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 416 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 461
>emb|AL111750.1|CNS019KE Botrytis cinerea strain T4 cDNA library Length = 636 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 375 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 434 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 435 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 480
>emb|AL111381.1|CNS019A5 Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 361 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 420 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 421 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 466
>emb|AL110722.1|CNS018RV Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 364 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 423 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 424 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 469
>emb|AL110976.1|CNS018YX Botrytis cinerea strain T4 cDNA library Length = 660 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||| ||||| || | ||||| || || || || ||||||||||| || || Sbjct: 358 gcacatccaagttaaccaagcaccaaagcaacgtcgtagaacttaccgtgctcacggtcg 417 Query: 364 catcaacccctacatgtccaacccatgccacattgagctgatcttg 409 |||||||| |||||||| || || |||||||| || |||||||| Sbjct: 418 tatcaacccatacatgtcaaatccttgccacatcgaattgatcttg 463
>gb|AY130354.1| Branchiostoma lanceolatum ribosomal protein L17 mRNA, partial cds Length = 472 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 245 aagaacgcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 ||||||||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 260 aagaacgcagagagcaatgctgaattcaagggtctggatgtggattctct 309
>ref|XM_865349.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC614032), mRNA Length = 442 Score = 50.1 bits (25), Expect = 0.006 Identities = 61/73 (83%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 195 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 254 Query: 364 catcaacccctac 376 |||||||||||| Sbjct: 255 gatcaacccctac 267
>gb|AY389929.1| Latimeria chalumnae ribosomal protein L17 mRNA, partial cds Length = 472 Score = 50.1 bits (25), Expect = 0.006 Identities = 64/77 (83%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 |||||||||||||| || ||||||||||| |||||| | ||| ||||||||||| || Sbjct: 359 acctaccgtgctcacggccgcatcaacccttacatgagctccccttgccacattgaaatg 418 Query: 404 atcttgtctgagaagga 420 ||| | |||||||||| Sbjct: 419 atcctaactgagaagga 435 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 aagaacgcagagagcaatgctgag 268 ||||| |||||||||||||||||| Sbjct: 260 aagaatgcagagagcaatgctgag 283
>ref|XM_871477.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC619156), mRNA Length = 627 Score = 48.1 bits (24), Expect = 0.025 Identities = 60/72 (83%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| ||||||| |||| ||| | |||||||| || Sbjct: 374 gcacatccaagtgaacaaagcccccaagatgcggcgcgggacttacagagctcatggtcg 433 Query: 364 catcaaccccta 375 ||||||||||| Sbjct: 434 tatcaaccccta 445
>ref|XM_868142.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC616175), mRNA Length = 398 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| |||||||||||| ||| | ||||| | || Sbjct: 144 gcacatccaagtgaacaaagcccccaagatgcggcgcaggacttacagagctcacagtcg 203 Query: 364 catcaacccctacatg 379 ||||||||||||||| Sbjct: 204 gatcaacccctacatg 219
>ref|XM_424454.1| PREDICTED: Gallus gallus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC426845), mRNA Length = 726 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 |||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 413 gcagagagcaatgctgagctcaagggtctcgatgtggattctct 456
>ref|XM_427732.1| PREDICTED: Gallus gallus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC430175), partial mRNA Length = 530 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 |||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 76 gcagagagcaatgctgagcttaagggtctcgatgtggattctct 119
>ref|XM_869796.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC617520), mRNA Length = 570 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| | | |||||||||||| ||| | ||||| || || Sbjct: 252 gcacatccaagtgaacaaagcccccacgatgcggcgcaggacttacagagctcacggtcg 311 Query: 364 catcaacccctacatg 379 ||||||||||||||| Sbjct: 312 gatcaacccctacatg 327
>ref|XM_584664.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC507961), mRNA Length = 590 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| |||||| | |||| ||| |||||||||||| ||| | ||||| || || Sbjct: 361 gcacatccaggtgaacaaagcccccaagatgcggcgcaggacttacagagctcacggtcg 420 Query: 364 catcaacccctacatg 379 ||||||||||||||| Sbjct: 421 gatcaacccctacatg 436
>gb|AY389962.1| Gallus gallus ribosomal protein L17 mRNA, partial cds Length = 472 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 |||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 266 gcagagagcaatgctgagctcaagggtctcgatgtggattctct 309
>ref|NM_205014.1| Gallus gallus T-cell leukemia homeobox 3 (TLX3), mRNA Length = 1603 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 |||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 1276 gcagagagcaatgctgagctcaagggtctcgatgtggattctct 1319
>emb|CR352619.1| Gallus gallus finished cDNA, clone ChEST14e6 Length = 715 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 |||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 409 gcagagagcaatgctgagcttaagggtctcgatgtggattctct 452
>gb|AY130351.1| Scyliorhinus canicula ribosomal protein L17 mRNA, partial cds Length = 472 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 242 ctaaagaacgcagagagcaatgctgaggtgaaaggtcttgatgtggat 289 |||||||||||||| ||||||||||| | || ||||| ||||||||| Sbjct: 257 ctaaagaacgcagaaagcaatgctgaactcaagggtctggatgtggat 304
>gb|DQ223555.1| Ovis aries clone TO-DOWN-E18-5 ribosomal protein L17 mRNA, partial cds Length = 538 Score = 48.1 bits (24), Expect = 0.025 Identities = 63/76 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 |||||||||||||||| | |||| ||| ||| |||||||| ||| | ||||| || || Sbjct: 274 gcacatccaagtgaacaaagcccccaagatgcgacgcaggacttacagagctcacggtcg 333 Query: 364 catcaacccctacatg 379 ||||||||||||||| Sbjct: 334 gatcaacccctacatg 349
>gb|AF071875.1|AF071875 Gallus gallus homeodomain protein (Tlx-3) mRNA, complete cds Length = 1603 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 251 gcagagagcaatgctgaggtgaaaggtcttgatgtggatgctct 294 |||||||||||||||||| | || ||||| ||||||||| |||| Sbjct: 1276 gcagagagcaatgctgagctcaagggtctcgatgtggattctct 1319
>emb|X71382.1|PCRPL17 P.carnea mRNA for 60S ribosomal protein L17 Length = 577 Score = 46.1 bits (23), Expect = 0.098 Identities = 41/47 (87%) Strand = Plus / Plus Query: 350 cgtgctcatggacgcatcaacccctacatgtccaacccatgccacat 396 ||||||||||| |||||||| || |||||||| | ||||||||||| Sbjct: 401 cgtgctcatggtcgcatcaatccatacatgtcgagtccatgccacat 447
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 56305 taccgtgcccatggtcgcatcaatccctacatgtc 56271
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 160409 taccgtgcccatggtcgcatcaatccctacatgtc 160375
>ref|NM_167089.1| Drosophila melanogaster Ribosomal protein L17 CG3203-RC, transcript variant C (RpL17), mRNA Length = 919 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 506 taccgtgcccatggtcgcatcaatccctacatgtc 540
>ref|NM_167088.1| Drosophila melanogaster Ribosomal protein L17 CG3203-RB, transcript variant B (RpL17), mRNA Length = 873 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 460 taccgtgcccatggtcgcatcaatccctacatgtc 494
>ref|NM_167087.1| Drosophila melanogaster Ribosomal protein L17 CG3203-RA, transcript variant A (RpL17), mRNA Length = 837 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 424 taccgtgcccatggtcgcatcaatccctacatgtc 458
>ref|NM_132118.2| Drosophila melanogaster Ribosomal protein L17 CG3203-RD, transcript variant D (RpL17), mRNA Length = 1065 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 652 taccgtgcccatggtcgcatcaatccctacatgtc 686
>gb|AY060845.1| Drosophila melanogaster GM02242 full length cDNA Length = 885 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 652 taccgtgcccatggtcgcatcaatccctacatgtc 686
>emb|AL111872.1|CNS019NS Botrytis cinerea strain T4 cDNA library Length = 720 Score = 46.1 bits (23), Expect = 0.098 Identities = 53/63 (84%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctgatc 406 ||||||||||| || || |||||||| |||||||| || || |||||||| || ||||| Sbjct: 399 taccgtgctcacggtcgtatcaacccatacatgtcaaatccttgccacatcgaattgatc 458 Query: 407 ttg 409 ||| Sbjct: 459 ttg 461
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 46.1 bits (23), Expect = 0.098 Identities = 32/35 (91%) Strand = Plus / Minus Query: 347 taccgtgctcatggacgcatcaacccctacatgtc 381 |||||||| ||||| |||||||| ||||||||||| Sbjct: 202296 taccgtgcccatggtcgcatcaatccctacatgtc 202262
>gb|BC077000.1| Xenopus tropicalis MGC89639 protein, mRNA (cDNA clone MGC:89639 IMAGE:7025713), complete cds Length = 653 Score = 44.1 bits (22), Expect = 0.39 Identities = 64/78 (82%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 ||||||||||||||||| || ||||| ||||| ||| | |||||||||||| || || Sbjct: 422 acctaccgtgctcatggtcgtatcaatccctatatgagctccccatgccacatcgaattg 481 Query: 404 atcttgtctgagaaggaa 421 ||| | ||||||||||| Sbjct: 482 atccttactgagaaggaa 499
>emb|CT025372.2| Xenopus tropicalis finished cDNA, clone TNeu098j06 Length = 658 Score = 44.1 bits (22), Expect = 0.39 Identities = 64/78 (82%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 ||||||||||||||||| || ||||| ||||| ||| | |||||||||||| || || Sbjct: 399 acctaccgtgctcatggtcgtatcaatccctatatgagctccccatgccacatcgaattg 458 Query: 404 atcttgtctgagaaggaa 421 ||| | ||||||||||| Sbjct: 459 atccttactgagaaggaa 476
>emb|Z83836.2|HS111J24 Human DNA sequence from clone RP1-111J24 on chromosome 22 Contains GSSs, complete sequence Length = 119008 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 317 aaccaggcccagaagcagcggc 338 |||||||||||||||||||||| Sbjct: 44859 aaccaggcccagaagcagcggc 44838
>ref|NM_171832.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-17) (rpl-17) mRNA, complete cds Length = 543 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctgatc 406 |||||||| || ||| | |||||||| |||||||| |||||||||||| ||| | ||| Sbjct: 330 taccgtgcccacggaagaatcaacccatacatgtcttccccatgccacatcgaggtcatc 389 Query: 407 ttgtctgagaagga 420 ||| | |||||||| Sbjct: 390 ttggccgagaagga 403
>ref|NM_170799.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-17) (rpl-17) mRNA, complete cds Length = 621 Score = 44.1 bits (22), Expect = 0.39 Identities = 61/74 (82%) Strand = Plus / Plus Query: 347 taccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctgatc 406 |||||||| || ||| | |||||||| |||||||| |||||||||||| ||| | ||| Sbjct: 414 taccgtgcccacggaagaatcaacccatacatgtcttccccatgccacatcgaggtcatc 473 Query: 407 ttgtctgagaagga 420 ||| | |||||||| Sbjct: 474 ttggccgagaagga 487
>ref|NM_001005078.1| Xenopus tropicalis MGC89639 protein (MGC89639), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.39 Identities = 64/78 (82%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 ||||||||||||||||| || ||||| ||||| ||| | |||||||||||| || || Sbjct: 422 acctaccgtgctcatggtcgtatcaatccctatatgagctccccatgccacatcgaattg 481 Query: 404 atcttgtctgagaaggaa 421 ||| | ||||||||||| Sbjct: 482 atccttactgagaaggaa 499
>dbj|AK110522.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-167-H04, full insert sequence Length = 944 Score = 44.1 bits (22), Expect = 0.39 Identities = 64/78 (82%) Strand = Plus / Plus Query: 304 gcacatccaagtgaaccaggcccagaagcagcggcgcaggacctaccgtgctcatggacg 363 ||||||||| || |||||||| | |||||||| | |||| |||||||| || || || Sbjct: 403 gcacatccaggtcaaccaggctcccaagcagcgcaggcggacgtaccgtgcccacggtcg 462 Query: 364 catcaacccctacatgtc 381 ||||||||||||||||| Sbjct: 463 tatcaacccctacatgtc 480
>emb|AL392172.9| Human DNA sequence from clone RP11-452F19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ12806), the gene for a novel protein (FLJ32421), two novel genes, the 5' end of two variants of the DISP1 gene for dispatched homolog 1 (Drosophila) and a CpG island, complete sequence Length = 195849 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 aggtgaaaggtcttgatgtgg 287 ||||||||||||||||||||| Sbjct: 167528 aggtgaaaggtcttgatgtgg 167508
>ref|XM_786536.1| PREDICTED: Strongylocentrotus purpuratus similar to 60S ribosomal protein L17 (L23) (Amino acid starvation-induced protein) (ASI) (LOC586769), mRNA Length = 631 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ccatgccacattgagctgatc 406 ||||||||||||||||||||| Sbjct: 437 ccatgccacattgagctgatc 457
>dbj|AK171782.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830010M10 product:unclassifiable, full insert sequence Length = 6121 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 gttctggatcttctaaagaac 250 ||||||||||||||||||||| Sbjct: 5282 gttctggatcttctaaagaac 5302
>gb|AY909403.1| Siniperca chuatsi clone C176 ribosomal protein L17 mRNA, partial cds Length = 441 Score = 42.1 bits (21), Expect = 1.5 Identities = 63/77 (81%) Strand = Plus / Plus Query: 344 acctaccgtgctcatggacgcatcaacccctacatgtccaacccatgccacattgagctg 403 |||||||| || || || |||||||||||||||||| | ||| |||||||| ||| || Sbjct: 246 acctaccgcgcccacggccgcatcaacccctacatgagctccccctgccacatcgagatg 305 Query: 404 atcttgtctgagaagga 420 ||| || | |||||||| Sbjct: 306 atcctgaccgagaagga 322
>gb|AF220552.1|AF220552 Paralichthys olivaceus ribosomal protein L17 mRNA, complete cds Length = 601 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 248 aacgcagagagcaatgctgaggtgaaaggtcttgatgtgga 288 |||||||||||||| |||||| | || ||||| |||||||| Sbjct: 301 aacgcagagagcaacgctgagctcaagggtctggatgtgga 341
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete sequence Length = 226220 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 gttctggatcttctaaagaac 250 ||||||||||||||||||||| Sbjct: 23820 gttctggatcttctaaagaac 23800
>gb|AC169819.2| Rhesus Macaque BAC CH250-132C22 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 176070 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gttcatttcaaggaacacta 40 |||||||||||||||||||| Sbjct: 68707 gttcatttcaaggaacacta 68688
>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence Length = 165714 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tgagctgatcttgtctgaga 416 |||||||||||||||||||| Sbjct: 93333 tgagctgatcttgtctgaga 93352
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gccgcgacctgcgtgttcat 26 |||||||||||||||||||| Sbjct: 540362 gccgcgacctgcgtgttcat 540343
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 ggaagagccggtgaagaagg 437 |||||||||||||||||||| Sbjct: 2470335 ggaagagccggtgaagaagg 2470354
>gb|AY278946.1| Branchiostoma belcheri tsingtaunese ribosomal protein L17 mRNA, complete cds Length = 683 Score = 40.1 bits (20), Expect = 6.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 245 aagaacgcagagagcaatgctgaggtgaaaggtcttgatgtgga 288 ||||| ||||||||||||||||| | || ||||| |||||||| Sbjct: 324 aagaatgcagagagcaatgctgaattcaagggtctggatgtgga 367
>gb|AC002461.2| Homo sapiens BAC clone CTA-204I16 from 7, complete sequence Length = 197273 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 gttcatttcaaggaacacta 40 |||||||||||||||||||| Sbjct: 8934 gttcatttcaaggaacacta 8915
>gb|AC108751.10| Homo sapiens 3 BAC RP11-278L15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131894 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 ggtgaagaaggaggctgagt 446 |||||||||||||||||||| Sbjct: 88405 ggtgaagaaggaggctgagt 88424
>ref|NM_001003629.1| Danio rerio zgc:100933 (zgc:100933), mRNA Length = 1675 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ccatgccacattgagctgat 405 |||||||||||||||||||| Sbjct: 1015 ccatgccacattgagctgat 1034
>gb|AC161615.4| Pan troglodytes BAC clone CH251-549K12 from chromosome 7, complete sequence Length = 193692 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gttcatttcaaggaacacta 40 |||||||||||||||||||| Sbjct: 181819 gttcatttcaaggaacacta 181838
>gb|AC159039.2| Pan troglodytes BAC clone CH251-65A20 from chromosome unknown, complete sequence Length = 170427 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 gttcatttcaaggaacacta 40 |||||||||||||||||||| Sbjct: 50083 gttcatttcaaggaacacta 50102
>gb|BC078194.1| Danio rerio zgc:100933, mRNA (cDNA clone MGC:100933 IMAGE:7145844), complete cds Length = 1675 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 ccatgccacattgagctgat 405 |||||||||||||||||||| Sbjct: 1015 ccatgccacattgagctgat 1034
>dbj|AP000852.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-851M3, complete sequence Length = 166277 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 ttgagctgatcttgtctgag 415 |||||||||||||||||||| Sbjct: 153615 ttgagctgatcttgtctgag 153596 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,406,394 Number of Sequences: 3902068 Number of extensions: 3406394 Number of successful extensions: 54444 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54100 Number of HSP's gapped (non-prelim): 299 length of query: 450 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 428 effective length of database: 17,147,199,772 effective search space: 7339001502416 effective search space used: 7339001502416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)