ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30n01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478733.1| Oryza sativa (japonica cultivar-group), mRNA 325 9e-86
2dbj|AK059018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 9e-86
3gb|AY104122.1| Zea mays PCO092329 mRNA sequence 319 5e-84
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
5dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
6dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic D... 127 4e-26
7ref|XM_994055.1| PREDICTED: Mus musculus nuclear protein in the ... 44 0.48
8ref|XM_146900.6| PREDICTED: Mus musculus nuclear protein in the ... 44 0.48
9ref|XM_917387.2| PREDICTED: Mus musculus nuclear protein in the ... 44 0.48
10dbj|AK033012.1| Mus musculus 12 days embryo female mullerian duc... 44 0.48
11gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome... 44 0.48
12dbj|AK080294.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 44 0.48
13gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome... 44 0.48
14ref|XM_508739.1| PREDICTED: Pan troglodytes similar to NPAT (LOC... 42 1.9
15ref|NM_002519.1| Homo sapiens nuclear protein, ataxia-telangiect... 42 1.9
16ref|XM_604956.2| PREDICTED: Bos taurus similar to nuclear protei... 42 1.9
17gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosom... 42 1.9
18ref|XM_546538.2| PREDICTED: Canis familiaris similar to nuclear ... 42 1.9
19gb|BC050561.2| Homo sapiens nuclear protein, ataxia-telangiectas... 42 1.9
20gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, comp... 42 1.9
21gb|BC094769.1| Homo sapiens nuclear protein, ataxia-telangiectas... 42 1.9
22emb|X97186.1|HSE14 H.sapiens mRNA for E14 protein 42 1.9
23emb|CR859703.1| Pongo pygmaeus mRNA; cDNA DKFZp469B186 (from clo... 42 1.9
24dbj|D89854.2| Homo sapiens NPAT gene, complete cds, with ATM gene 42 1.9
25gb|BC040356.1| Homo sapiens, Similar to nuclear protein, ataxia-... 42 1.9
26dbj|AP002433.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.9
27dbj|AP001925.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.9
28gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome... 42 1.9
29gb|U58852.1|HSU58852 Human NPAT mRNA, complete cds 42 1.9
30dbj|D83243.1|HUMNPATA Human NPAT mRNA, complete cds 42 1.9
31gb|AC115937.14| Mus musculus chromosome 5, clone RP24-547J21, co... 40 7.5
32gb|AC007568.1| Homo sapiens BAC clone CTB-180P8 from 7q31.2, com... 40 7.5
33emb|CR689782.2|CNS0FV6Q Tetraodon nigroviridis full-length cDNA 40 7.5
34gb|U46671.1| Caenorhabditis elegans cosmid C14E2, complete sequence 40 7.5
35gb|AC144512.1| Pan troglodytes BAC clone RP43-51G12 from 7, comp... 40 7.5
36gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome... 40 7.5
37emb|Z82195.2|HS274L7 Human DNA sequence from clone RP1-274L7 on ... 40 7.5
38gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 7.5
39emb|AL078591.18|HSDJ198I9 Human DNA sequence from clone RP1-198I... 40 7.5
40emb|AL080250.11|HSJ234P15 Human DNA sequence from clone RP1-234P... 40 7.5
41emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; se... 40 7.5
42emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chro... 40 7.5
43gb|DQ388145.1| Homo sapiens isolate cftr13838_B cystic fibrosis ... 40 7.5
44gb|DQ388144.1| Homo sapiens isolate cftr13838_A cystic fibrosis ... 40 7.5
45gb|DQ388143.1| Homo sapiens isolate cftr11589_B cystic fibrosis ... 40 7.5
46gb|DQ388142.1| Homo sapiens isolate cftr11589_A cystic fibrosis ... 40 7.5
47gb|DQ388141.1| Homo sapiens isolate cftr11521_B cystic fibrosis ... 40 7.5
48gb|DQ388140.1| Homo sapiens isolate cftr11521_A cystic fibrosis ... 40 7.5
49gb|DQ388139.1| Homo sapiens isolate cftr11376_B cystic fibrosis ... 40 7.5
50gb|DQ388138.1| Homo sapiens isolate cftr11376_A cystic fibrosis ... 40 7.5
51gb|DQ388135.1| Homo sapiens isolate cftr11321_B cystic fibrosis ... 40 7.5
52gb|DQ388134.1| Homo sapiens isolate cftr11321_A cystic fibrosis ... 40 7.5
53gb|DQ388137.1| Homo sapiens isolate cftr11373_B cystic fibrosis ... 40 7.5
54gb|DQ388136.1| Homo sapiens isolate cftr11373_A cystic fibrosis ... 40 7.5
55gb|DQ388133.1| Homo sapiens isolate cftr10976_B cystic fibrosis ... 40 7.5
56gb|DQ388132.1| Homo sapiens isolate cftr10976_A cystic fibrosis ... 40 7.5
57gb|DQ388131.1| Homo sapiens isolate cftr10543_B cystic fibrosis ... 40 7.5
58gb|DQ388130.1| Homo sapiens isolate cftr10543_A cystic fibrosis ... 40 7.5
59gb|DQ388129.1| Homo sapiens isolate cftr10540_B cystic fibrosis ... 40 7.5
60gb|DQ388128.1| Homo sapiens isolate cftr10540_A cystic fibrosis ... 40 7.5
61gb|DQ356264.1| Homo sapiens isolate cftr14672_B cystic fibrosis ... 40 7.5
62gb|DQ356263.1| Homo sapiens isolate cftr14672_A cystic fibrosis ... 40 7.5
63gb|DQ356262.1| Homo sapiens isolate cftr14663_B cystic fibrosis ... 40 7.5
64gb|DQ356261.1| Homo sapiens isolate cftr14663_A cystic fibrosis ... 40 7.5
65gb|DQ356260.1| Homo sapiens isolate cftr10975_B cystic fibrosis ... 40 7.5
66gb|DQ356259.1| Homo sapiens isolate cftr10975_A cystic fibrosis ... 40 7.5
67gb|DQ356258.1| Homo sapiens isolate cftr10471_B cystic fibrosis ... 40 7.5
68gb|DQ356257.1| Homo sapiens isolate cftr10471_A cystic fibrosis ... 40 7.5
69gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold 40 7.5
70gb|DQ354391.1| Homo sapiens isolate cftr01814_B cystic fibrosis ... 40 7.5
71gb|DQ354390.1| Homo sapiens isolate cftr01814_A cystic fibrosis ... 40 7.5
72gb|DQ354389.1| Homo sapiens isolate cftr14683_B cystic fibrosis ... 40 7.5
73gb|DQ354388.1| Homo sapiens isolate cftr14683_A cystic fibrosis ... 40 7.5
74gb|AC165377.4| Nomascus leucogenys leucogenys clone CH271-412A17... 40 7.5
75gb|AC010251.3|AC010251 Homo sapiens chromosome 5 clone CTC-426D1... 40 7.5
76dbj|AB112586.1| Streptomyces sp. WA46 genes for salicylate degra... 40 7.5
77gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 7.5
78emb|Z46935.2|CEM106 Caenorhabditis elegans Cosmid M106, complete... 40 7.5
79gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, com... 40 7.5
80emb|CT030169.4| Mouse DNA sequence from clone RP24-292J1 on chro... 40 7.5
81gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete seq... 40 7.5
82emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on ch... 40 7.5 
>ref|XM_478733.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1480

 Score =  325 bits (164), Expect = 9e-86
 Identities = 299/344 (86%)
 Strand = Plus / Plus

                                                                       
Query: 7   ccaccctcacctgcaaagacacctgatgctgatggagctgacaagactgaagaggaagag 66
           |||||||||||||  ||| ||||||||||||| || |||||||| ||||| || ||||||
Sbjct: 317 ccaccctcacctgtgaaggcacctgatgctgacggggctgacaaaactgacgatgaagag 376

                                                                       
Query: 67  aaccctatgatggagactgttagaagtaaatgcatcactcagctgctgctacttggggct 126
           || |||||||||||||||||||| |||||||| ||||||||  | |||||||||||||| 
Sbjct: 377 aatcctatgatggagactgttaggagtaaatgtatcactcaattactgctacttggggcc 436

                                                                       
Query: 127 attgacagtatacagaagaggtattggagcaaactacaagccacacaacagatcgcaatt 186
           |||||||| |||||||||||||| |||||||  ||| || ||||||| ||||  ||||| 
Sbjct: 437 attgacagcatacagaagaggtactggagcaggctaaaaaccacacagcagactgcaata 496

                                                                       
Query: 187 atggatatcctgctctcgctcctagaatttgcttcttcatataactcaccatcgaacctt 246
           ||||||||  |||| || |||||||||||||||||||| ||||||||| | || || |||
Sbjct: 497 atggatattttgctatcactcctagaatttgcttcttcctataactcaacttcaaatctt 556

                                                                       
Query: 247 cggacaaggatgcaccatataccgccagaaaggccaccactaaatcttcttcgccaggag 306
           || || ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| 
Sbjct: 557 cgaaccaggatgcaccatatacccccagaaaggcctccactgaatcttcttcgccaggaa 616

                                                       
Query: 307 ctagctggaactactatttatttagagattctacacaaatcaac 350
           |||||||||||| |||| ||||| |||||||| || ||||||||
Sbjct: 617 ctagctggaactgctatctatttggagattcttcagaaatcaac 660



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                       
Query: 413 aacaagaaaagctcaagagcctagcggaagggaagctcgtttcattttgtgggaatattt 472
           |||| ||||||||||||||||| || ||||||||||| ||||| ||||||||| | || |
Sbjct: 723 aacatgaaaagctcaagagcctcgcagaagggaagcttgtttcgttttgtgggcagatct 782

                                                                       
Query: 473 tgaaagaagcgtctgatctccagcctagcaacggggaaactgctagtgcggacatacatc 532
           ||||||| || |||||||||||||| ||||  |||||| |||| ||||| |||||||| |
Sbjct: 783 tgaaagatgcttctgatctccagccaagcactggggaagctgcaagtgcagacatacacc 842

                  
Query: 533 gtgtact 539
           |||||||
Sbjct: 843 gtgtact 849
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>dbj|AK059018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B01, full
           insert sequence
          Length = 1480

 Score =  325 bits (164), Expect = 9e-86
 Identities = 299/344 (86%)
 Strand = Plus / Plus

                                                                       
Query: 7   ccaccctcacctgcaaagacacctgatgctgatggagctgacaagactgaagaggaagag 66
           |||||||||||||  ||| ||||||||||||| || |||||||| ||||| || ||||||
Sbjct: 317 ccaccctcacctgtgaaggcacctgatgctgacggggctgacaaaactgacgatgaagag 376

                                                                       
Query: 67  aaccctatgatggagactgttagaagtaaatgcatcactcagctgctgctacttggggct 126
           || |||||||||||||||||||| |||||||| ||||||||  | |||||||||||||| 
Sbjct: 377 aatcctatgatggagactgttaggagtaaatgtatcactcaattactgctacttggggcc 436

                                                                       
Query: 127 attgacagtatacagaagaggtattggagcaaactacaagccacacaacagatcgcaatt 186
           |||||||| |||||||||||||| |||||||  ||| || ||||||| ||||  ||||| 
Sbjct: 437 attgacagcatacagaagaggtactggagcaggctaaaaaccacacagcagactgcaata 496

                                                                       
Query: 187 atggatatcctgctctcgctcctagaatttgcttcttcatataactcaccatcgaacctt 246
           ||||||||  |||| || |||||||||||||||||||| ||||||||| | || || |||
Sbjct: 497 atggatattttgctatcactcctagaatttgcttcttcctataactcaacttcaaatctt 556

                                                                       
Query: 247 cggacaaggatgcaccatataccgccagaaaggccaccactaaatcttcttcgccaggag 306
           || || ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| 
Sbjct: 557 cgaaccaggatgcaccatatacccccagaaaggcctccactgaatcttcttcgccaggaa 616

                                                       
Query: 307 ctagctggaactactatttatttagagattctacacaaatcaac 350
           |||||||||||| |||| ||||| |||||||| || ||||||||
Sbjct: 617 ctagctggaactgctatctatttggagattcttcagaaatcaac 660



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Plus

                                                                       
Query: 413 aacaagaaaagctcaagagcctagcggaagggaagctcgtttcattttgtgggaatattt 472
           |||| ||||||||||||||||| || ||||||||||| ||||| ||||||||| | || |
Sbjct: 723 aacatgaaaagctcaagagcctcgcagaagggaagcttgtttcgttttgtgggcagatct 782

                                                                       
Query: 473 tgaaagaagcgtctgatctccagcctagcaacggggaaactgctagtgcggacatacatc 532
           ||||||| || |||||||||||||| ||||  |||||| |||| ||||| |||||||| |
Sbjct: 783 tgaaagatgcttctgatctccagccaagcactggggaagctgcaagtgcagacatacacc 842

                  
Query: 533 gtgtact 539
           |||||||
Sbjct: 843 gtgtact 849
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>gb|AY104122.1| Zea mays PCO092329 mRNA sequence
          Length = 1616

 Score =  319 bits (161), Expect = 5e-84
 Identities = 442/535 (82%), Gaps = 3/535 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    tgctccaccctcacctgcaaagacacctgatgctgatggagctgacaagactgaagagga 62
            |||||||||||||||||  ||| | ||||||| ||| |   |||||||| ||||||||||
Sbjct: 478  tgctccaccctcacctgtgaaggcccctgatgatgagg---ctgacaaggctgaagagga 534

                                                                        
Query: 63   agagaaccctatgatggagactgttagaagtaaatgcatcactcagctgctgctacttgg 122
            ||| | |||||||||||| ||||| || || ||||| || || ||| | ||||| |||||
Sbjct: 535  agaaagccctatgatggaaactgtcaggagcaaatgtattacacagttactgctgcttgg 594

                                                                        
Query: 123  ggctattgacagtatacagaagaggtattggagcaaactacaagccacacaacagatcgc 182
            ||| |||||||| |||||||||| |||||||||||  ||| |||| ||||| ||||| ||
Sbjct: 595  ggcaattgacagcatacagaagaagtattggagcaggctaaaagctacacagcagatagc 654

                                                                        
Query: 183  aattatggatatcctgctctcgctcctagaatttgcttcttcatataactcaccatcgaa 242
            ||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 655  aataatggatatcttgctctcactcctagaatttgcttcttcatataactcaccttcaaa 714

                                                                        
Query: 243  ccttcggacaaggatgcaccatataccgccagaaaggccaccactaaatcttcttcgcca 302
             |||||||| ||||||||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 715  tcttcggacgaggatgcaccatatacctccagaaagacctccactgaatcttctccgtca 774

                                                                        
Query: 303  ggagctagctggaactactatttatttagagattctacacaaatcaacagtgcacaatgg 362
             || ||||||||||| || ||||||||||| || || || |||||||||||| |  | | 
Sbjct: 775  agaactagctggaacaacgatttatttagatatcctccataaatcaacagtggagcagga 834

                                                                        
Query: 363  tgcaaatggctcatctgaggaaacaaatggatctggtgtggagtctaatcaacaagaaaa 422
            || ||| | |||   ||||||||||||||| |    |||||| ||| || | || |||||
Sbjct: 835  tgaaaaggactccattgaggaaacaaatggtttaaatgtggaatctgatgaccaggaaaa 894

                                                                        
Query: 423  gctcaagagcctagcggaagggaagctcgtttcattttgtgggaatattttgaaagaagc 482
            | |||||  |||||| ||||||||||| ||||| ||||| ||  |  |||||||||| ||
Sbjct: 895  gatcaagtacctagcagaagggaagctggtttctttttgcggacaggttttgaaagaggc 954

                                                                   
Query: 483  gtctgatctccagcctagcaacggggaaactgctagtgcggacatacatcgtgta 537
            ||||||| | ||||||||||  |||||  |||| ||||| |||||||||||||||
Sbjct: 955  gtctgatttacagcctagcactggggaggctgccagtgcagacatacatcgtgta 1009
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 4e-26
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                            
Query: 26       cacctgatgctgatggagctgacaagactgaagaggaagagaaccctatgatggagactg 85
                ||||||||||||| || |||||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 22582682 cacctgatgctgacggggctgacaaaactgacgatgaagagaatcctatgatggagactg 22582623

                                                                        
Query: 86       ttagaagtaaatgcatcactcagctgctgctacttggggctattgacagtatacag 141
                |||| |||||||| ||||||||  | |||||||||||||| |||||||| ||||||
Sbjct: 22582622 ttaggagtaaatgtatcactcaattactgctacttggggccattgacagcatacag 22582567



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                            
Query: 413      aacaagaaaagctcaagagcctagcggaagggaagctcgtttcattttgtgggaatattt 472
                |||| ||||||||||||||||| || ||||||||||| ||||| ||||||||| | || |
Sbjct: 22582134 aacatgaaaagctcaagagcctcgcagaagggaagcttgtttcgttttgtgggcagatct 22582075

                                                                            
Query: 473      tgaaagaagcgtctgatctccagcctagcaacggggaaactgctagtgcggacatacatc 532
                ||||||| || |||||||||||||| ||||  |||||| |||| ||||| |||||||| |
Sbjct: 22582074 tgaaagatgcttctgatctccagccaagcactggggaagctgcaagtgcagacatacacc 22582015

                       
Query: 533      gtgtact 539
                |||||||
Sbjct: 22582014 gtgtact 22582008



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                            
Query: 139      cagaagaggtattggagcaaactacaagccacacaacagatcgcaattatggatatcctg 198
                ||||||||||| |||||||  ||| || ||||||| ||||  ||||| ||||||||  ||
Sbjct: 22582480 cagaagaggtactggagcaggctaaaaaccacacagcagactgcaataatggatattttg 22582421

                                                                            
Query: 199      ctctcgctcctagaatttgcttcttcatataactcaccatcgaaccttcggacaaggatg 258
                || || |||||||||||||||||||| ||||||||| | || || ||||| || ||||||
Sbjct: 22582420 ctatcactcctagaatttgcttcttcctataactcaacttcaaatcttcgaaccaggatg 22582361

                                     
Query: 259      caccatataccgccagaaagg 279
                ||||||||||| |||||||||
Sbjct: 22582360 caccatatacccccagaaagg 22582340



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                            
Query: 277      aggccaccactaaatcttcttcgccaggagctagctggaactactatttatttagagatt 336
                ||||| ||||| ||||||||||||||||| |||||||||||| |||| ||||| ||||||
Sbjct: 22582270 aggcctccactgaatcttcttcgccaggaactagctggaactgctatctatttggagatt 22582211

                              
Query: 337      ctacacaaatcaac 350
                || || ||||||||
Sbjct: 22582210 cttcagaaatcaac 22582197
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:OJ1773_H01
          Length = 146543

 Score =  127 bits (64), Expect = 4e-26
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                       
Query: 26  cacctgatgctgatggagctgacaagactgaagaggaagagaaccctatgatggagactg 85
           ||||||||||||| || |||||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 580 cacctgatgctgacggggctgacaaaactgacgatgaagagaatcctatgatggagactg 521

                                                                   
Query: 86  ttagaagtaaatgcatcactcagctgctgctacttggggctattgacagtatacag 141
           |||| |||||||| ||||||||  | |||||||||||||| |||||||| ||||||
Sbjct: 520 ttaggagtaaatgtatcactcaattactgctacttggggccattgacagcatacag 465



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                       
Query: 139 cagaagaggtattggagcaaactacaagccacacaacagatcgcaattatggatatcctg 198
           ||||||||||| |||||||  ||| || ||||||| ||||  ||||| ||||||||  ||
Sbjct: 378 cagaagaggtactggagcaggctaaaaaccacacagcagactgcaataatggatattttg 319

                                                                       
Query: 199 ctctcgctcctagaatttgcttcttcatataactcaccatcgaaccttcggacaaggatg 258
           || || |||||||||||||||||||| ||||||||| | || || ||||| || ||||||
Sbjct: 318 ctatcactcctagaatttgcttcttcctataactcaacttcaaatcttcgaaccaggatg 259

                                
Query: 259 caccatataccgccagaaagg 279
           ||||||||||| |||||||||
Sbjct: 258 caccatatacccccagaaagg 238



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                       
Query: 277 aggccaccactaaatcttcttcgccaggagctagctggaactactatttatttagagatt 336
           ||||| ||||| ||||||||||||||||| |||||||||||| |||| ||||| ||||||
Sbjct: 168 aggcctccactgaatcttcttcgccaggaactagctggaactgctatctatttggagatt 109

                         
Query: 337 ctacacaaatcaac 350
           || || ||||||||
Sbjct: 108 cttcagaaatcaac 95



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 413 aacaagaaaagctcaagagcctagcggaaggg 444
           |||| ||||||||||||||||| || ||||||
Sbjct: 32  aacatgaaaagctcaagagcctcgcagaaggg 1
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>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_E08
          Length = 119926

 Score =  127 bits (64), Expect = 4e-26
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                         
Query: 26    cacctgatgctgatggagctgacaagactgaagaggaagagaaccctatgatggagactg 85
             ||||||||||||| || |||||||| ||||| || |||||||| ||||||||||||||||
Sbjct: 63064 cacctgatgctgacggggctgacaaaactgacgatgaagagaatcctatgatggagactg 63005

                                                                     
Query: 86    ttagaagtaaatgcatcactcagctgctgctacttggggctattgacagtatacag 141
             |||| |||||||| ||||||||  | |||||||||||||| |||||||| ||||||
Sbjct: 63004 ttaggagtaaatgtatcactcaattactgctacttggggccattgacagcatacag 62949



 Score =  117 bits (59), Expect = 4e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                         
Query: 413   aacaagaaaagctcaagagcctagcggaagggaagctcgtttcattttgtgggaatattt 472
             |||| ||||||||||||||||| || ||||||||||| ||||| ||||||||| | || |
Sbjct: 62516 aacatgaaaagctcaagagcctcgcagaagggaagcttgtttcgttttgtgggcagatct 62457

                                                                         
Query: 473   tgaaagaagcgtctgatctccagcctagcaacggggaaactgctagtgcggacatacatc 532
             ||||||| || |||||||||||||| ||||  |||||| |||| ||||| |||||||| |
Sbjct: 62456 tgaaagatgcttctgatctccagccaagcactggggaagctgcaagtgcagacatacacc 62397

                    
Query: 533   gtgtact 539
             |||||||
Sbjct: 62396 gtgtact 62390



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                         
Query: 139   cagaagaggtattggagcaaactacaagccacacaacagatcgcaattatggatatcctg 198
             ||||||||||| |||||||  ||| || ||||||| ||||  ||||| ||||||||  ||
Sbjct: 62862 cagaagaggtactggagcaggctaaaaaccacacagcagactgcaataatggatattttg 62803

                                                                         
Query: 199   ctctcgctcctagaatttgcttcttcatataactcaccatcgaaccttcggacaaggatg 258
             || || |||||||||||||||||||| ||||||||| | || || ||||| || ||||||
Sbjct: 62802 ctatcactcctagaatttgcttcttcctataactcaacttcaaatcttcgaaccaggatg 62743

                                  
Query: 259   caccatataccgccagaaagg 279
             ||||||||||| |||||||||
Sbjct: 62742 caccatatacccccagaaagg 62722



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 277   aggccaccactaaatcttcttcgccaggagctagctggaactactatttatttagagatt 336
             ||||| ||||| ||||||||||||||||| |||||||||||| |||| ||||| ||||||
Sbjct: 62652 aggcctccactgaatcttcttcgccaggaactagctggaactgctatctatttggagatt 62593

                           
Query: 337   ctacacaaatcaac 350
             || || ||||||||
Sbjct: 62592 cttcagaaatcaac 62579
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>ref|XM_994055.1| PREDICTED: Mus musculus nuclear protein in the AT region (Npat), mRNA
          Length = 4266

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 374  catctgaggaaacaaatggatc 395
            ||||||||||||||||||||||
Sbjct: 2344 catctgaggaaacaaatggatc 2323
to top
>ref|XM_146900.6| PREDICTED: Mus musculus nuclear protein in the AT region (Npat), mRNA
          Length = 7347

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 374  catctgaggaaacaaatggatc 395
            ||||||||||||||||||||||
Sbjct: 2353 catctgaggaaacaaatggatc 2332
to top
>ref|XM_917387.2| PREDICTED: Mus musculus nuclear protein in the AT region (Npat), mRNA
          Length = 7347

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 374  catctgaggaaacaaatggatc 395
            ||||||||||||||||||||||
Sbjct: 2353 catctgaggaaacaaatggatc 2332
to top
>dbj|AK033012.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820401K01 product:similar to NPAT (E14
            AND A-T PROTEINS) [Homo sapiens], full insert sequence
          Length = 3329

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 374  catctgaggaaacaaatggatc 395
            ||||||||||||||||||||||
Sbjct: 2333 catctgaggaaacaaatggatc 2312
to top
>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete
            sequence
          Length = 163817

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 374  catctgaggaaacaaatggatc 395
            ||||||||||||||||||||||
Sbjct: 6340 catctgaggaaacaaatggatc 6319
to top
>dbj|AK080294.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630038B17 product:similar to NPAT (E14
            AND A-T PROTEINS) [Homo sapiens], full insert sequence
          Length = 4684

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 374  catctgaggaaacaaatggatc 395
            ||||||||||||||||||||||
Sbjct: 2353 catctgaggaaacaaatggatc 2332
to top
>gb|AC156640.2| Mus musculus BAC clone RP23-313M2 from chromosome 9, complete sequence
          Length = 175708

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 374   catctgaggaaacaaatggatc 395
             ||||||||||||||||||||||
Sbjct: 47988 catctgaggaaacaaatggatc 48009
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>ref|XM_508739.1| PREDICTED: Pan troglodytes similar to NPAT (LOC451529), mRNA
          Length = 4236

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2094 atctgaggaaacaaatggatc 2074
to top
>ref|NM_002519.1| Homo sapiens nuclear protein, ataxia-telangiectasia locus (NPAT),
            mRNA
          Length = 5895

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2293 atctgaggaaacaaatggatc 2273
to top
>ref|XM_604956.2| PREDICTED: Bos taurus similar to nuclear protein,
            ataxia-telangiectasia locus (LOC526583), partial mRNA
          Length = 3583

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2829 atctgaggaaacaaatggatc 2809
to top
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete
             sequence
          Length = 205684

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    ctcacctgcaaagacacctga 32
             |||||||||||||||||||||
Sbjct: 32356 ctcacctgcaaagacacctga 32336
to top
>ref|XM_546538.2| PREDICTED: Canis familiaris similar to nuclear protein,
            ataxia-telangiectasia locus (LOC489420), mRNA
          Length = 4727

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2301 atctgaggaaacaaatggatc 2281
to top
>gb|BC050561.2| Homo sapiens nuclear protein, ataxia-telangiectasia locus, mRNA (cDNA
            clone IMAGE:5553400), partial cds
          Length = 3746

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2346 atctgaggaaacaaatggatc 2326
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>gb|AC142329.1| Pan troglodytes BAC clone RP43-25D8 from 11, complete sequence
          Length = 188643

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 375    atctgaggaaacaaatggatc 395
              |||||||||||||||||||||
Sbjct: 112272 atctgaggaaacaaatggatc 112292
to top
>gb|BC094769.1| Homo sapiens nuclear protein, ataxia-telangiectasia locus, mRNA (cDNA
            clone IMAGE:30519841), with apparent retained intron
          Length = 3961

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2366 atctgaggaaacaaatggatc 2346
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>emb|X97186.1|HSE14 H.sapiens mRNA for E14 protein
          Length = 5895

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2293 atctgaggaaacaaatggatc 2273
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>emb|CR859703.1| Pongo pygmaeus mRNA; cDNA DKFZp469B186 (from clone DKFZp469B186)
          Length = 3757

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2383 atctgaggaaacaaatggatc 2363
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>dbj|D89854.2| Homo sapiens NPAT gene, complete cds, with ATM gene
          Length = 10733

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 6438 atctgaggaaacaaatggatc 6418
to top
>gb|BC040356.1| Homo sapiens, Similar to nuclear protein, ataxia-telangiectasia
            locus, clone IMAGE:4510421, mRNA, partial cds
          Length = 4212

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2352 atctgaggaaacaaatggatc 2332
to top
>dbj|AP002433.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-144G7, complete
              sequence
          Length = 165164

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 375    atctgaggaaacaaatggatc 395
              |||||||||||||||||||||
Sbjct: 157303 atctgaggaaacaaatggatc 157323
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>dbj|AP001925.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-241D13, complete
            sequence
          Length = 180163

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 6768 atctgaggaaacaaatggatc 6788
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>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence
          Length = 208117

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     ctcacctgcaaagacacctga 32
              |||||||||||||||||||||
Sbjct: 199634 ctcacctgcaaagacacctga 199614
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>gb|U58852.1|HSU58852 Human NPAT mRNA, complete cds
          Length = 3840

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2259 atctgaggaaacaaatggatc 2239
to top
>dbj|D83243.1|HUMNPATA Human NPAT mRNA, complete cds
          Length = 5900

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  atctgaggaaacaaatggatc 395
            |||||||||||||||||||||
Sbjct: 2325 atctgaggaaacaaatggatc 2305
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>gb|AC115937.14| Mus musculus chromosome 5, clone RP24-547J21, complete sequence
          Length = 215400

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    cagctgctgctacttggggc 125
              ||||||||||||||||||||
Sbjct: 196871 cagctgctgctacttggggc 196852
to top
>gb|AC007568.1| Homo sapiens BAC clone CTB-180P8 from 7q31.2, complete sequence
          Length = 137277

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    acaagactgaagaggaagag 66
             ||||||||||||||||||||
Sbjct: 40996 acaagactgaagaggaagag 41015
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>emb|CR689782.2|CNS0FV6Q Tetraodon nigroviridis full-length cDNA
          Length = 950

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  tggagctgacaagactgaag 58
           ||||||||||||||||||||
Sbjct: 118 tggagctgacaagactgaag 137
to top
>gb|U46671.1| Caenorhabditis elegans cosmid C14E2, complete sequence
          Length = 38775

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gtatacagaagaggtattgg 153
             ||||||||||||||||||||
Sbjct: 37275 gtatacagaagaggtattgg 37256



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gtatacagaagaggtattgg 153
             ||||||||||||||||||||
Sbjct: 37152 gtatacagaagaggtattgg 37133
to top
>gb|AC144512.1| Pan troglodytes BAC clone RP43-51G12 from 7, complete sequence
          Length = 161807

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 113678 acaagactgaagaggaagag 113659
to top
>gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome 14, complete sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aaagacacctgatgctgatg 40
             ||||||||||||||||||||
Sbjct: 34640 aaagacacctgatgctgatg 34621
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>emb|Z82195.2|HS274L7 Human DNA sequence from clone RP1-274L7 on chromosome X Contains a novel
              gene and a novel gene similar to uncharacterized
              hypothalamus protein HT011, complete sequence
          Length = 119566

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     actgttagaagtaaatgcat 101
              ||||||||||||||||||||
Sbjct: 117884 actgttagaagtaaatgcat 117903
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    agccacacaacagatcgcaa 184
              ||||||||||||||||||||
Sbjct: 498812 agccacacaacagatcgcaa 498831
to top
>emb|AL078591.18|HSDJ198I9 Human DNA sequence from clone RP1-198I9 on chromosome 6q12-13 Contains
              the 3' end of a novel gene (KIAA1411, FLJ20176, FLJ11049),
              complete sequence
          Length = 144649

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 451    gtttcattttgtgggaatattttg 474
              |||||||||||| |||||||||||
Sbjct: 126411 gtttcattttgtaggaatattttg 126388
to top
>emb|AL080250.11|HSJ234P15 Human DNA sequence from clone RP1-234P15 on chromosome 6q13-14.3
             contains the 5' end of the COL12A1 gene for collagen type
             XII alpha 1, the COX7A2 gene for  cytochrome c oxidase
             subunit VIIa polypeptide 2 (liver), two novel genes and
             three  CpG islands, complete sequence
          Length = 125641

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   tagctggaactactatttat 327
             ||||||||||||||||||||
Sbjct: 44569 tagctggaactactatttat 44550
to top
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5
          Length = 348986

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    tctgaggaaacaaatggatc 395
              ||||||||||||||||||||
Sbjct: 257371 tctgaggaaacaaatggatc 257390
to top
>emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chromosome 4 Contains a
             novel pseudogene, complete sequence
          Length = 195873

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   tgaggaaacaaatggatctg 397
             ||||||||||||||||||||
Sbjct: 46428 tgaggaaacaaatggatctg 46447
to top
>gb|DQ388145.1| Homo sapiens isolate cftr13838_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) gene, complete cds; and CTTNBP2 (CTTNBP2)
              gene, partial cds
          Length = 422127

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344876 acaagactgaagaggaagag 344895
to top
>gb|DQ388144.1| Homo sapiens isolate cftr13838_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 423518

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 346265 acaagactgaagaggaagag 346284
to top
>gb|DQ388143.1| Homo sapiens isolate cftr11589_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 460130

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 346728 acaagactgaagaggaagag 346747
to top
>gb|DQ388142.1| Homo sapiens isolate cftr11589_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 461372

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 347392 acaagactgaagaggaagag 347411
to top
>gb|DQ388141.1| Homo sapiens isolate cftr11521_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 459743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 349263 acaagactgaagaggaagag 349282
to top
>gb|DQ388140.1| Homo sapiens isolate cftr11521_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 468331

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 355107 acaagactgaagaggaagag 355126
to top
>gb|DQ388139.1| Homo sapiens isolate cftr11376_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 480116

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 361063 acaagactgaagaggaagag 361082
to top
>gb|DQ388138.1| Homo sapiens isolate cftr11376_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 450881

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 351683 acaagactgaagaggaagag 351702
to top
>gb|DQ388135.1| Homo sapiens isolate cftr11321_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 429415

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 345485 acaagactgaagaggaagag 345504
to top
>gb|DQ388134.1| Homo sapiens isolate cftr11321_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 434687

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 350750 acaagactgaagaggaagag 350769
to top
>gb|DQ388137.1| Homo sapiens isolate cftr11373_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 411333

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344399 acaagactgaagaggaagag 344418
to top
>gb|DQ388136.1| Homo sapiens isolate cftr11373_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2)
              gene, complete cds
          Length = 446786

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344441 acaagactgaagaggaagag 344460
to top
>gb|DQ388133.1| Homo sapiens isolate cftr10976_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 462987

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 348356 acaagactgaagaggaagag 348375
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>gb|DQ388132.1| Homo sapiens isolate cftr10976_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 456610

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 347530 acaagactgaagaggaagag 347549
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>gb|DQ388131.1| Homo sapiens isolate cftr10543_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 443905

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344718 acaagactgaagaggaagag 344737
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>gb|DQ388130.1| Homo sapiens isolate cftr10543_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 459213

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344720 acaagactgaagaggaagag 344739
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>gb|DQ388129.1| Homo sapiens isolate cftr10540_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 458144

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344444 acaagactgaagaggaagag 344463
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>gb|DQ388128.1| Homo sapiens isolate cftr10540_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 451649

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 344462 acaagactgaagaggaagag 344481
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>gb|DQ356264.1| Homo sapiens isolate cftr14672_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 425451

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 348243 acaagactgaagaggaagag 348262
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>gb|DQ356263.1| Homo sapiens isolate cftr14672_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 458173

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 353698 acaagactgaagaggaagag 353717
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>gb|DQ356262.1| Homo sapiens isolate cftr14663_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 451123

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 346724 acaagactgaagaggaagag 346743
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>gb|DQ356261.1| Homo sapiens isolate cftr14663_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2)
              gene, complete cds
          Length = 449665

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 348966 acaagactgaagaggaagag 348985
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>gb|DQ356260.1| Homo sapiens isolate cftr10975_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 447228

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 348377 acaagactgaagaggaagag 348396
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>gb|DQ356259.1| Homo sapiens isolate cftr10975_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 450685

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 347516 acaagactgaagaggaagag 347535
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>gb|DQ356258.1| Homo sapiens isolate cftr10471_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) gene, partial cds; and CTTNBP2 (CTTNBP2)
              gene, complete cds
          Length = 461061

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 332784 acaagactgaagaggaagag 332803
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>gb|DQ356257.1| Homo sapiens isolate cftr10471_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member 7 (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 495329

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 357197 acaagactgaagaggaagag 357216
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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      acaagactgaagaggaagag 66
               ||||||||||||||||||||
Sbjct: 1580845 acaagactgaagaggaagag 1580864
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>gb|DQ354391.1| Homo sapiens isolate cftr01814_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 439798

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 359757 acaagactgaagaggaagag 359776
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>gb|DQ354390.1| Homo sapiens isolate cftr01814_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 437219

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 351009 acaagactgaagaggaagag 351028
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>gb|DQ354389.1| Homo sapiens isolate cftr14683_B cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 430078

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 346104 acaagactgaagaggaagag 346123
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>gb|DQ354388.1| Homo sapiens isolate cftr14683_A cystic fibrosis transmembrane
              conductance regulator ATP-binding cassette sub-family C
              member (CFTR) and CTTNBP2 (CTTNBP2) genes, complete cds
          Length = 461441

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 346248 acaagactgaagaggaagag 346267
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>gb|AC165377.4| Nomascus leucogenys leucogenys clone CH271-412A17, complete sequence
          Length = 195646

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     acaagactgaagaggaagag 66
              ||||||||||||||||||||
Sbjct: 137421 acaagactgaagaggaagag 137440
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>gb|AC010251.3|AC010251 Homo sapiens chromosome 5 clone CTC-426D19, complete sequence
          Length = 175191

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    tcaacaagaaaagctcaaga 430
              ||||||||||||||||||||
Sbjct: 120543 tcaacaagaaaagctcaaga 120562
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>dbj|AB112586.1| Streptomyces sp. WA46 genes for salicylate degradation related
             proteins, complete cds
          Length = 27521

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ccaccctcacctgcaaagac 26
             ||||||||||||||||||||
Sbjct: 16188 ccaccctcacctgcaaagac 16169
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     ctgatgctgatggagctgac 48
              ||||||||||||||||||||
Sbjct: 388818 ctgatgctgatggagctgac 388837
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>emb|Z46935.2|CEM106 Caenorhabditis elegans Cosmid M106, complete sequence
          Length = 39973

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  gtatacagaagaggtattgg 153
            ||||||||||||||||||||
Sbjct: 1371 gtatacagaagaggtattgg 1390



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  gtatacagaagaggtattgg 153
            ||||||||||||||||||||
Sbjct: 1248 gtatacagaagaggtattgg 1267
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>gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, complete sequence
          Length = 263382

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   cagctgctgctacttggggc 125
             ||||||||||||||||||||
Sbjct: 50144 cagctgctgctacttggggc 50125
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>emb|CT030169.4| Mouse DNA sequence from clone RP24-292J1 on chromosome 12, complete
              sequence
          Length = 178789

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    tgaggaaacaaatggatctg 397
              ||||||||||||||||||||
Sbjct: 153636 tgaggaaacaaatggatctg 153655
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>gb|AC006631.1| Caenorhabditis elegans cosmid F27B3, complete sequence
          Length = 30767

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gtatacagaagaggtattgg 153
             ||||||||||||||||||||
Sbjct: 13510 gtatacagaagaggtattgg 13529



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gtatacagaagaggtattgg 153
             ||||||||||||||||||||
Sbjct: 12663 gtatacagaagaggtattgg 12682



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 134  gtatacagaagaggtattgg 153
            ||||||||||||||||||||
Sbjct: 9318 gtatacagaagaggtattgg 9337
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>emb|AL683888.10| Mouse DNA sequence from clone RP23-462C12 on chromosome X, complete
             sequence
          Length = 200089

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 453   ttcattttgtgggaatattttgaa 476
             |||||| |||||||||||||||||
Sbjct: 53003 ttcattgtgtgggaatattttgaa 53026


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,564,060
Number of Sequences: 3902068
Number of extensions: 5564060
Number of successful extensions: 127766
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127382
Number of HSP's gapped (non-prelim): 382
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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