>MURD_RHOPA (Q6N409) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 469

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -2

Query: 304 AFVISCWCK*SEMVA*ACRWYVVADSRNVPYT*TALLV*GLRVPLT 167
           A VI+C      MV  A   ++ AD RN+P+T  A LV    VPLT
Sbjct: 33  AEVIACDDNLDRMVEAAQAGFITADLRNLPWTNFAALVLTPGVPLT 78

>EXEC1_ARATH (Q93YW0) EXECUTER1 protein, chloroplast precursor|
          Length = 684

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -2

Query: 508 NPRWHSTV--VYFSACRRLCLLLPWFVLLSRDD 416
           NPRW S +  V  SA +R   +L W+  L  DD
Sbjct: 64  NPRWDSAIQDVLKSAIKRFDSVLSWYATLDNDD 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,763,808
Number of Sequences: 219361
Number of extensions: 1605688
Number of successful extensions: 4382
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4380
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)