ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30m04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
2dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
3dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
4gb|AY109171.1| Zea mays PCO144014 mRNA sequence 88 4e-14
5ref|NM_192520.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
6gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosom... 50 0.009
7gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, com... 46 0.14
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.55
9gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genom... 44 0.55
10gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genom... 44 0.55
11gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete ... 44 0.55
12ref|XM_963026.1| PREDICTED: Tribolium castaneum similar to CG126... 44 0.55
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
15dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
16dbj|AK121968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.55
17gb|AY529462.1| Mycoplasma capricolum subsp. capripneumoniae Mg2+... 42 2.2
18gb|AC125027.12| Mus musculus chromosome 8, clone RP24-68F20, com... 42 2.2
19gb|AC154498.2| Mus musculus BAC clone RP24-112F5 from chromosome... 42 2.2
20gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 2.2
21ref|XM_965549.1| PREDICTED: Tribolium castaneum hypothetical pro... 42 2.2
22emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 42 2.2
23gb|AC108747.5| Homo sapiens 3 BAC RP11-268E23 (Roswell Park Canc... 42 2.2
24gb|DQ384110.1| Rhizobium leguminosarum bv. trifolii strain TA1 p... 42 2.2
25gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, comple... 42 2.2
26gb|AC122209.5| Mus musculus BAC clone RP23-96B17 from chromosome... 42 2.2
27gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, comple... 42 2.2
28gb|AC008509.5|AC008509 Homo sapiens chromosome 5 clone CTC-449I1... 42 2.2
29gb|AC005690.8|AC005690 Homo sapiens chromosome 4 clone C0483I23,... 42 2.2
30dbj|AK063284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
31gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete se... 42 2.2
32emb|AL808113.7| Mouse DNA sequence from clone RP23-464N8 on chro... 42 2.2
33gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, co... 40 8.6
34gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, co... 40 8.6
35gb|AY496881.1| Actinobacillus pleuropneumoniae serotype 12 capsu... 40 8.6
36gb|AC137969.9| Mus musculus chromosome 7, clone RP23-267N11, com... 40 8.6
37ref|NM_001032475.1| Ciona intestinalis axonemal p83.9 (CiAxp83.9... 40 8.6
38gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome... 40 8.6
39gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome... 40 8.6
40gb|AY370674.1| Enterobacteria phage K1-5, complete genome 40 8.6
41emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chro... 40 8.6
42gb|AC124410.4| Mus musculus BAC clone RP24-266J11 from chromosom... 40 8.6
43gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosom... 40 8.6
44gb|AC122863.4| Mus musculus BAC clone RP23-142A14 from chromosom... 40 8.6
45gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosom... 40 8.6
46gb|AC122931.4| Mus musculus BAC clone RP23-15C15 from 9, complet... 40 8.6
47gb|AC131659.2| Mus musculus BAC clone RP23-241H7 from 3, complet... 40 8.6
48ref|XM_726360.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 8.6
49gb|AC006971.2| Homo sapiens PAC clone RP4-791C19 from 7, complet... 40 8.6
50gb|AC006651.2| Caenorhabditis elegans fosmid H06I04, complete se... 40 8.6
51emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 ... 40 8.6
52gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete se... 40 8.6
53gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete se... 40 8.6
54gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 8.6
55emb|AL365195.17| Human DNA sequence from clone RP11-451E16 on ch... 40 8.6
56gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, c... 40 8.6
57emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chrom... 40 8.6
58emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chr... 40 8.6
59emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chrom... 40 8.6
60ref|XM_780854.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.6
61gb|AC153011.4| Mus musculus BAC clone RP23-316O20 from chromosom... 40 8.6
62emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chr... 40 8.6
63gb|AC101941.11| Mus musculus chromosome 7, clone RP24-112F21, co... 40 8.6
64gb|AC138665.11| Mus musculus chromosome 3, clone RP24-161I8, com... 40 8.6
65gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, compl... 40 8.6
66gb|AC159475.9| Mus musculus 10 BAC RP23-55G19 (Roswell Park Canc... 40 8.6
67gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Can... 40 8.6
68gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete s... 40 8.6
69dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 8.6
70gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, co... 40 8.6
71gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Canc... 40 8.6
72gb|AC091911.3| Homo sapiens chromosome 5 clone RP11-211K15, comp... 40 8.6
73emb|CR361553.4| Mouse DNA sequence from clone RP24-456I14 on chr... 40 8.6
74gb|AC011689.6|AC011689 Homo sapiens chromosome , clone RP11-15J1... 40 8.6
75gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, comp... 40 8.6
76dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
77dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
78dbj|AB210690.1| Ciona intestinalis mRNA for transcription factor... 40 8.6
79gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosom... 40 8.6
80gb|AC131340.4| Mus musculus BAC clone RP23-472G22 from chromosom... 40 8.6
81gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, comple... 40 8.6
82gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, comple... 40 8.6
83gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park C... 40 8.6
84dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
85gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, comple... 40 8.6
86gb|AC016412.12| Homo sapiens chromosome 8, clone RP11-9B18, comp... 40 8.6
87dbj|AB083181.1| Ciona intestinalis CiAxp83.9 mRNA for axonemal p... 40 8.6
88dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
89dbj|AK174735.1| Ciona intestinalis cDNA, clone:ciht008k18, full ... 40 8.6
90dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
91dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
92gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complet... 40 8.6
93gb|AC174383.3| Mus musculus BAC clone RP23-244A20 from chromosom... 40 8.6
94gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequ... 40 8.6
95dbj|AK116639.1| Ciona intestinalis cDNA, clone:cits050e19, full ... 40 8.6
96emb|AM084415.1| Enterobacteria phage K1E, complete genome 40 8.6
97dbj|AP006702.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.6
98dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.6
99gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 40 8.6
100emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chro... 40 8.6
101gb|AC122116.9| Mus musculus chromosome 7, clone RP23-449M8, comp... 40 8.6
102emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chro... 40 8.6
103gb|AC171207.2| Mus musculus BAC clone RP23-339A3 from chromosome... 40 8.6
104gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, comp... 40 8.6
105gb|M73776.1|FLAN2NAE Influenza virus A/Mallard/New York/6874/78 ... 40 8.6 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  161 bits (81), Expect = 3e-36
 Identities = 234/285 (82%)
 Strand = Plus / Plus

                                                                            
Query: 183      aattgtacacaatcttgcatactcaatctgtaacttgcatgtgttggttaagcaaactac 242
                ||||||||| |||||| | || ||  ||||||||||||||   |||||||||||||| ||
Sbjct: 22723297 aattgtacaaaatctttcgtattctgtctgtaacttgcatacattggttaagcaaacaac 22723356

                                                                            
Query: 243      ttcatcgcataagttttggtctagccttggttcttgtgatcatggtgccttcctcgaggg 302
                 ||  | ||  ||||||||||||||||| |||||| ||||||  |||| ||||| |||||
Sbjct: 22723357 ctcgccacaccagttttggtctagccttagttcttctgatcacagtgcattccttgaggg 22723416

                                                                            
Query: 303      ttttgaattgcttggttcaagaaaagcaaagaacacgtttctcctctgcactgcctcttg 362
                |||||||||| ||||||||| ||||||||||||| | |||||| |||||||| |  | | 
Sbjct: 22723417 ttttgaattgtttggttcaacaaaagcaaagaacgcatttctcatctgcacttctgcatc 22723476

                                                                            
Query: 363      tagtgatatagctggatctggccttgacagctgtgaagaacttgcatctttctttgtttc 422
                || |||| ||  |||||||  ||||||  |  ||||||| ||| ||||||| || |||||
Sbjct: 22723477 tactgatgtaaatggatctaaccttgatggaggtgaagagcttacatctttgttagtttc 22723536

                                                             
Query: 423      ttctctcctgaagaaaatgggaaaaattgcaatgcagatggagga 467
                ||| ||||||||||  |||||||| ||||||||||||||| ||||
Sbjct: 22723537 ttcgctcctgaagaggatgggaaagattgcaatgcagatgcagga 22723581



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                          
Query: 582      tgaaggatttgctgggaaagtcatca 607
                ||||||||||||||||||||||||||
Sbjct: 22723787 tgaaggatttgctgggaaagtcatca 22723812



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 396      tgaagaacttgcatctttct 415
                ||||||||||||||||||||
Sbjct: 23782712 tgaagaacttgcatctttct 23782731
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>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0024F06
          Length = 129402

 Score =  161 bits (81), Expect = 3e-36
 Identities = 234/285 (82%)
 Strand = Plus / Plus

                                                                          
Query: 183    aattgtacacaatcttgcatactcaatctgtaacttgcatgtgttggttaagcaaactac 242
              ||||||||| |||||| | || ||  ||||||||||||||   |||||||||||||| ||
Sbjct: 100009 aattgtacaaaatctttcgtattctgtctgtaacttgcatacattggttaagcaaacaac 100068

                                                                          
Query: 243    ttcatcgcataagttttggtctagccttggttcttgtgatcatggtgccttcctcgaggg 302
               ||  | ||  ||||||||||||||||| |||||| ||||||  |||| ||||| |||||
Sbjct: 100069 ctcgccacaccagttttggtctagccttagttcttctgatcacagtgcattccttgaggg 100128

                                                                          
Query: 303    ttttgaattgcttggttcaagaaaagcaaagaacacgtttctcctctgcactgcctcttg 362
              |||||||||| ||||||||| ||||||||||||| | |||||| |||||||| |  | | 
Sbjct: 100129 ttttgaattgtttggttcaacaaaagcaaagaacgcatttctcatctgcacttctgcatc 100188

                                                                          
Query: 363    tagtgatatagctggatctggccttgacagctgtgaagaacttgcatctttctttgtttc 422
              || |||| ||  |||||||  ||||||  |  ||||||| ||| ||||||| || |||||
Sbjct: 100189 tactgatgtaaatggatctaaccttgatggaggtgaagagcttacatctttgttagtttc 100248

                                                           
Query: 423    ttctctcctgaagaaaatgggaaaaattgcaatgcagatggagga 467
              ||| ||||||||||  |||||||| ||||||||||||||| ||||
Sbjct: 100249 ttcgctcctgaagaggatgggaaagattgcaatgcagatgcagga 100293



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 582    tgaaggatttgctgggaaagtcatca 607
              ||||||||||||||||||||||||||
Sbjct: 100499 tgaaggatttgctgggaaagtcatca 100524
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0712E02
          Length = 158084

 Score =  161 bits (81), Expect = 3e-36
 Identities = 234/285 (82%)
 Strand = Plus / Plus

                                                                         
Query: 183   aattgtacacaatcttgcatactcaatctgtaacttgcatgtgttggttaagcaaactac 242
             ||||||||| |||||| | || ||  ||||||||||||||   |||||||||||||| ||
Sbjct: 40686 aattgtacaaaatctttcgtattctgtctgtaacttgcatacattggttaagcaaacaac 40745

                                                                         
Query: 243   ttcatcgcataagttttggtctagccttggttcttgtgatcatggtgccttcctcgaggg 302
              ||  | ||  ||||||||||||||||| |||||| ||||||  |||| ||||| |||||
Sbjct: 40746 ctcgccacaccagttttggtctagccttagttcttctgatcacagtgcattccttgaggg 40805

                                                                         
Query: 303   ttttgaattgcttggttcaagaaaagcaaagaacacgtttctcctctgcactgcctcttg 362
             |||||||||| ||||||||| ||||||||||||| | |||||| |||||||| |  | | 
Sbjct: 40806 ttttgaattgtttggttcaacaaaagcaaagaacgcatttctcatctgcacttctgcatc 40865

                                                                         
Query: 363   tagtgatatagctggatctggccttgacagctgtgaagaacttgcatctttctttgtttc 422
             || |||| ||  |||||||  ||||||  |  ||||||| ||| ||||||| || |||||
Sbjct: 40866 tactgatgtaaatggatctaaccttgatggaggtgaagagcttacatctttgttagtttc 40925

                                                          
Query: 423   ttctctcctgaagaaaatgggaaaaattgcaatgcagatggagga 467
             ||| ||||||||||  |||||||| ||||||||||||||| ||||
Sbjct: 40926 ttcgctcctgaagaggatgggaaagattgcaatgcagatgcagga 40970



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 582   tgaaggatttgctgggaaagtcatca 607
             ||||||||||||||||||||||||||
Sbjct: 41176 tgaaggatttgctgggaaagtcatca 41201
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>gb|AY109171.1| Zea mays PCO144014 mRNA sequence
          Length = 738

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                       
Query: 540 aacctatgctgttcacatgttggccccattgtacaaagttgctgaaggatttgctgggaa 599
           ||||||||||| |||| | |||||||||||||| |||||| |||||||||||||||||||
Sbjct: 227 aacctatgctgatcacctcttggccccattgtataaagtttctgaaggatttgctgggaa 286

                                   
Query: 600 agtcatcactgatgaagttaagca 623
           |||  | | ||||||||| |||||
Sbjct: 287 agttgttagtgatgaagtgaagca 310



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 160/199 (80%)
 Strand = Plus / Plus

                                                                       
Query: 312 gcttggttcaagaaaagcaaagaacacgtttctcctctgcactgcctcttgtagtgatat 371
           ||||||||||||||||||||| || |  |||||||| || ||| |  | | ||||||| |
Sbjct: 2   gcttggttcaagaaaagcaaaaaatatatttctcctttgtacttcaacatctagtgatgt 61

                                                                       
Query: 372 agctggatctggccttgacagctgtgaagaacttgcatctttctttgtttcttctctcct 431
           | |||||||| |||| |||| |   ||||| | | ||||||| || ||||| ||  ||||
Sbjct: 62  atctggatctagcctcgacaccaacgaagagcctacatctttgttagtttcgtcaatcct 121

                                                                       
Query: 432 gaagaaaatgggaaaaattgcaatgcagatggaggacacacatatgaagatcgtgttcag 491
            ||||| ||||||| |||||||||||| ||| |||| ||||| || |||| |||||||| 
Sbjct: 122 aaagaagatgggaagaattgcaatgcaaatgcaggatacacagataaagaacgtgttcaa 181

                              
Query: 492 ttgtttcagtatgatttca 510
           ||| |||| ||||||||||
Sbjct: 182 ttgcttcaatatgatttca 200
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>ref|NM_192520.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 6624

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 582  tgaaggatttgctgggaaagtcatca 607
            ||||||||||||||||||||||||||
Sbjct: 6174 tgaaggatttgctgggaaagtcatca 6199
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>gb|AC124174.4| Mus musculus BAC clone RP23-181O22 from chromosome 3, complete sequence
          Length = 197553

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 484   gtgttcagttgtttcagtatgattt 508
             |||||||||||||||||||||||||
Sbjct: 78461 gtgttcagttgtttcagtatgattt 78437
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>gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, complete sequence
          Length = 229553

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 517   ctaaaaactgaagctgaattttcaacctatg 547
             |||| ||||||||||||||||| ||||||||
Sbjct: 64756 ctaagaactgaagctgaattttgaacctatg 64786
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        tcggcacgaggtaattctagct 22
                ||||||||||||||||||||||
Sbjct: 25837827 tcggcacgaggtaattctagct 25837848
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>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence,
            complete sequence
          Length = 190834

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1    tcggcacgaggtaattctagct 22
            ||||||||||||||||||||||
Sbjct: 7069 tcggcacgaggtaattctagct 7048
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>gb|AC145387.2| Oryza sativa chromosome 3 BAC OSJNBb0031A14 genomic sequence,
            complete sequence
          Length = 44761

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    tcggcacgaggtaattctagct 22
            ||||||||||||||||||||||
Sbjct: 8770 tcggcacgaggtaattctagct 8791
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>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 569   tgtacaaagttgctgaaggatttgctgggaaagt 602
             |||| |||||| |||||||||||||||| |||||
Sbjct: 77277 tgtataaagtttctgaaggatttgctggaaaagt 77244
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>ref|XM_963026.1| PREDICTED: Tribolium castaneum similar to CG12608-PA (LOC656500),
           mRNA
          Length = 1110

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 168 tacggaaaataagaaaattgta 189
           ||||||||||||||||||||||
Sbjct: 963 tacggaaaataagaaaattgta 984
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1        tcggcacgaggtaattctagct 22
                ||||||||||||||||||||||
Sbjct: 25929136 tcggcacgaggtaattctagct 25929157
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 472     catatgaagatcgtgttcagttgtttcagtatga 505
               |||||||||||| |||| |||| |||||||||||
Sbjct: 8137373 catatgaagatcttgttaagttttttcagtatga 8137406
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>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0503B05
          Length = 156814

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 472    catatgaagatcgtgttcagttgtttcagtatga 505
              |||||||||||| |||| |||| |||||||||||
Sbjct: 125566 catatgaagatcttgttaagttttttcagtatga 125599
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>dbj|AK121968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108F20, full
            insert sequence
          Length = 3463

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 472  catatgaagatcgtgttcagttgtttcagtatga 505
            |||||||||||| |||| |||| |||||||||||
Sbjct: 1515 catatgaagatcttgttaagttttttcagtatga 1548
to top
>gb|AY529462.1| Mycoplasma capricolum subsp. capripneumoniae Mg2+ transport ATPase
            gene, partial cds; arcA pseudogene, complete sequence;
            ArcB gene, complete cds; arcD pseudogene, complete
            sequence; glucokinase gene, complete cds; and
            hypothetical protein gene, partial cds
          Length = 7109

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 518  taaaaactgaagctgaatttt 538
            |||||||||||||||||||||
Sbjct: 6372 taaaaactgaagctgaatttt 6352
to top
>gb|AC125027.12| Mus musculus chromosome 8, clone RP24-68F20, complete sequence
          Length = 194850

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    atttcactaaaactaaaaact 525
              |||||||||||||||||||||
Sbjct: 135587 atttcactaaaactaaaaact 135607
to top
>gb|AC154498.2| Mus musculus BAC clone RP24-112F5 from chromosome 17, complete sequence
          Length = 153547

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 404   ttgcatctttctttgtttctt 424
             |||||||||||||||||||||
Sbjct: 91677 ttgcatctttctttgtttctt 91697
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 580    gctgaaggatttgctgggaaa 600
              |||||||||||||||||||||
Sbjct: 834487 gctgaaggatttgctgggaaa 834507
to top
>ref|XM_965549.1| PREDICTED: Tribolium castaneum hypothetical protein LOC659224
           (LOC659224), mRNA
          Length = 909

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  gagaagaggaaacaagagaag 72
           |||||||||||||||||||||
Sbjct: 815 gagaagaggaaacaagagaag 835
to top
>emb|BX842644.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 3/4
          Length = 349402

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 518    taaaaactgaagctgaatttt 538
              |||||||||||||||||||||
Sbjct: 303309 taaaaactgaagctgaatttt 303329



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 518    taaaaactgaagctgaatttt 538
              |||||||||||||||||||||
Sbjct: 290007 taaaaactgaagctgaatttt 290027
to top
>gb|AC108747.5| Homo sapiens 3 BAC RP11-268E23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 46509

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 403   cttgcatctttctttgtttcttctc 427
             |||||||||||||||||||| ||||
Sbjct: 33756 cttgcatctttctttgtttcatctc 33780
to top
>gb|DQ384110.1| Rhizobium leguminosarum bv. trifolii strain TA1 polysaccharide
             biosynthesis region I
          Length = 32260

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 420   ttcttctctcctgaagaaaat 440
             |||||||||||||||||||||
Sbjct: 21092 ttcttctctcctgaagaaaat 21112
to top
>gb|AC008447.8| Homo sapiens chromosome 5 clone CTC-340K5, complete sequence
          Length = 159922

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 422   cttctctcctgaagaaaatgggaaa 446
             |||||||||||||||||| ||||||
Sbjct: 42733 cttctctcctgaagaaaaagggaaa 42757
to top
>gb|AC122209.5| Mus musculus BAC clone RP23-96B17 from chromosome 17, complete sequence
          Length = 185883

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 404   ttgcatctttctttgtttctt 424
             |||||||||||||||||||||
Sbjct: 34813 ttgcatctttctttgtttctt 34793
to top
>gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, complete sequence
          Length = 188829

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 409    tctttctttgtttcttctctc 429
              |||||||||||||||||||||
Sbjct: 163915 tctttctttgtttcttctctc 163935
to top
>gb|AC008509.5|AC008509 Homo sapiens chromosome 5 clone CTC-449I11, complete sequence
          Length = 189456

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 422   cttctctcctgaagaaaatgggaaa 446
             |||||||||||||||||| ||||||
Sbjct: 65836 cttctctcctgaagaaaaagggaaa 65812
to top
>gb|AC005690.8|AC005690 Homo sapiens chromosome 4 clone C0483I23, complete sequence
          Length = 193424

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 409    tctttctttgtttcttctctc 429
              |||||||||||||||||||||
Sbjct: 163907 tctttctttgtttcttctctc 163927
to top
>dbj|AK063284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D05, full
           insert sequence
          Length = 519

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 98  tccaaccaagcaggctattcctaat 122
           |||||||||||| ||||||||||||
Sbjct: 21  tccaaccaagcatgctattcctaat 45
to top
>gb|AC007967.3|AC007967 Homo sapiens clone NH0373F14, complete sequence
          Length = 187547

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 408   atctttctttgtttcttctct 428
             |||||||||||||||||||||
Sbjct: 31618 atctttctttgtttcttctct 31598
to top
>emb|AL808113.7| Mouse DNA sequence from clone RP23-464N8 on chromosome X, complete
            sequence
          Length = 129039

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 410  ctttctttgtttcttctctcc 430
            |||||||||||||||||||||
Sbjct: 3547 ctttctttgtttcttctctcc 3567
to top
>gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, complete sequence
          Length = 201984

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    tctttctttgtttcttctct 428
              ||||||||||||||||||||
Sbjct: 143959 tctttctttgtttcttctct 143940
to top
>gb|AC119932.7| Mus musculus chromosome 15, clone RP24-260C11, complete sequence
          Length = 170117

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 358    tcttgtagtgatatagctggatct 381
              |||| |||||||||||||||||||
Sbjct: 112308 tcttttagtgatatagctggatct 112285
to top
>gb|AY496881.1| Actinobacillus pleuropneumoniae serotype 12 capsular polysaccharide
            biosynthesis gene cluster, partial sequence; and unknown
            gene
          Length = 6810

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 180  gaaaattgtacacaatcttgcata 203
            ||||||||||||||||||| ||||
Sbjct: 2396 gaaaattgtacacaatcttccata 2373
to top
>gb|AC137969.9| Mus musculus chromosome 7, clone RP23-267N11, complete sequence
          Length = 176711

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    gtagtgatatagctggatct 381
              ||||||||||||||||||||
Sbjct: 161281 gtagtgatatagctggatct 161300
to top
>ref|NM_001032475.1| Ciona intestinalis axonemal p83.9 (CiAxp83.9), mRNA
          Length = 2372

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  catctttctttgtttcttct 426
            ||||||||||||||||||||
Sbjct: 1031 catctttctttgtttcttct 1012
to top
>gb|AC123038.3| Mus musculus BAC clone RP24-527G2 from chromosome 3, complete sequence
          Length = 144150

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   tctttctttgtttcttctct 428
             ||||||||||||||||||||
Sbjct: 76726 tctttctttgtttcttctct 76745
to top
>gb|AC122535.3| Mus musculus BAC clone RP24-539K4 from chromosome 7, complete sequence
          Length = 186561

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   catctttctttgtttcttct 426
             ||||||||||||||||||||
Sbjct: 53482 catctttctttgtttcttct 53463
to top
>gb|AY370674.1| Enterobacteria phage K1-5, complete genome
          Length = 44385

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   gaacacgtttctcctctgca 352
             ||||||||||||||||||||
Sbjct: 12097 gaacacgtttctcctctgca 12078
to top
>emb|CT010465.5| Mouse DNA sequence from clone RP23-273I1 on chromosome 13, complete
             sequence
          Length = 220594

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   tctttctttgtttcttctct 428
             ||||||||||||||||||||
Sbjct: 83187 tctttctttgtttcttctct 83168
to top
>gb|AC124410.4| Mus musculus BAC clone RP24-266J11 from chromosome 7, complete sequence
          Length = 162876

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   catctttctttgtttcttct 426
             ||||||||||||||||||||
Sbjct: 12331 catctttctttgtttcttct 12350
to top
>gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosome 3, complete sequence
          Length = 187545

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    tctttctttgtttcttctct 428
              ||||||||||||||||||||
Sbjct: 135108 tctttctttgtttcttctct 135127
to top
>gb|AC122863.4| Mus musculus BAC clone RP23-142A14 from chromosome 7, complete sequence
          Length = 226601

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aggtaattctagctctctgg 28
             ||||||||||||||||||||
Sbjct: 97302 aggtaattctagctctctgg 97321
to top
>gb|AC117275.3| Mus musculus BAC clone RP23-383F11 from chromosome 18, complete
             sequence
          Length = 209162

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 503   tgatttcactaaaactaaaaactgaagc 530
             |||||||| ||||| |||||||||||||
Sbjct: 40671 tgatttcattaaaattaaaaactgaagc 40644
to top
>gb|AC122931.4| Mus musculus BAC clone RP23-15C15 from 9, complete sequence
          Length = 192274

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 362 gtagtgatatagctggatct 381
           ||||||||||||||||||||
Sbjct: 288 gtagtgatatagctggatct 269
to top
>gb|AC131659.2| Mus musculus BAC clone RP23-241H7 from 3, complete sequence
          Length = 171521

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   agtgatatagctggatctgg 383
             ||||||||||||||||||||
Sbjct: 84666 agtgatatagctggatctgg 84685
to top
>ref|XM_726360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY03447)
           partial mRNA
          Length = 4578

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 435 gaaaatgggaaaaattgcaa 454
           ||||||||||||||||||||
Sbjct: 802 gaaaatgggaaaaattgcaa 821
to top
>gb|AC006971.2| Homo sapiens PAC clone RP4-791C19 from 7, complete sequence
          Length = 115861

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 409    tctttctttgtttcttctct 428
              ||||||||||||||||||||
Sbjct: 106684 tctttctttgtttcttctct 106665
to top
>gb|AC006651.2| Caenorhabditis elegans fosmid H06I04, complete sequence
          Length = 47880

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 436   aaaatgggaaaaattgcaat 455
             ||||||||||||||||||||
Sbjct: 29526 aaaatgggaaaaattgcaat 29545
to top
>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10,
             complete sequence
          Length = 121560

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   catctttctttgtttcttct 426
             ||||||||||||||||||||
Sbjct: 99559 catctttctttgtttcttct 99540
to top
>gb|AC137828.24| Medicago truncatula clone mth2-6c16, complete sequence
          Length = 128575

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   atgatttcactaaaactaaa 521
             ||||||||||||||||||||
Sbjct: 67257 atgatttcactaaaactaaa 67238
to top
>gb|AC138056.33| Medicago truncatula clone mth2-13i6, complete sequence
          Length = 157258

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 502   atgatttcactaaaactaaa 521
             ||||||||||||||||||||
Sbjct: 23709 atgatttcactaaaactaaa 23690
to top
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 409     tctttctttgtttcttctct 428
               ||||||||||||||||||||
Sbjct: 2348104 tctttctttgtttcttctct 2348085
to top
>emb|AL365195.17| Human DNA sequence from clone RP11-451E16 on chromosome 9, complete
           sequence
          Length = 88920

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 gtttctcctctgcactgcct 358
           ||||||||||||||||||||
Sbjct: 63  gtttctcctctgcactgcct 82
to top
>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence
          Length = 184349

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    tggttcaagaaaagcaaaga 334
              ||||||||||||||||||||
Sbjct: 137938 tggttcaagaaaagcaaaga 137919
to top
>emb|AL355475.7| Human DNA sequence from clone RP1-241M7 on chromosome 1q43-44, complete
             sequence
          Length = 84707

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   tctttctttgtttcttctct 428
             ||||||||||||||||||||
Sbjct: 73845 tctttctttgtttcttctct 73826
to top
>emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chromosome 9, complete
              sequence
          Length = 162700

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    gtttctcctctgcactgcct 358
              ||||||||||||||||||||
Sbjct: 160763 gtttctcctctgcactgcct 160782
to top
>emb|AL137843.4| Human DNA sequence from clone RP3-377O6 on chromosome Xq22.2-23
             Contains a thyroid autoantigen 70kDa (Ku antigen) (G22P1)
             pseudogene, complete sequence
          Length = 133402

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 438   aatgggaaaaattgcaatgcagat 461
             |||||| |||||||||||||||||
Sbjct: 44458 aatggggaaaattgcaatgcagat 44435
to top
>ref|XM_780854.1| PREDICTED: Strongylocentrotus purpuratus similar to PHD finger
           protein 10 (XAP135) (LOC580820), mRNA
          Length = 3198

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 catctttctttgtttcttct 426
           ||||||||||||||||||||
Sbjct: 946 catctttctttgtttcttct 927
to top
>gb|AC153011.4| Mus musculus BAC clone RP23-316O20 from chromosome 9, complete sequence
          Length = 190332

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   gtagtgatatagctggatct 381
             ||||||||||||||||||||
Sbjct: 87356 gtagtgatatagctggatct 87337
to top
>emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chromosome 11 Contains a
              pseudogene similar to part of eukaryotic translation
              initiation factor 3, subunit 5 (epsilon) Eif3s5, complete
              sequence
          Length = 160629

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    ttgcatctttctttgtttct 423
              ||||||||||||||||||||
Sbjct: 106213 ttgcatctttctttgtttct 106194
to top
>gb|AC101941.11| Mus musculus chromosome 7, clone RP24-112F21, complete sequence
          Length = 157117

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   gtagtgatatagctggatct 381
             ||||||||||||||||||||
Sbjct: 26188 gtagtgatatagctggatct 26207
to top
>gb|AC138665.11| Mus musculus chromosome 3, clone RP24-161I8, complete sequence
          Length = 168293

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   agtgatatagctggatctgg 383
             ||||||||||||||||||||
Sbjct: 84720 agtgatatagctggatctgg 84739
to top
>gb|AC113389.2| Homo sapiens chromosome 5 clone RP11-35A11, complete sequence
          Length = 170706

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 433    aagaaaatgggaaaaattgc 452
              ||||||||||||||||||||
Sbjct: 141709 aagaaaatgggaaaaattgc 141690
to top
>gb|AC159475.9| Mus musculus 10 BAC RP23-55G19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205117

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   tctttctttgtttcttctct 428
             ||||||||||||||||||||
Sbjct: 21762 tctttctttgtttcttctct 21781
to top
>gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175447

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   tctcctctgcactgcctctt 361
             ||||||||||||||||||||
Sbjct: 14550 tctcctctgcactgcctctt 14531
to top
>gb|AC153129.20| Medicago truncatula clone mth2-103o2, complete sequence
          Length = 111951

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    gaaacaagagaagttggatg 79
             ||||||||||||||||||||
Sbjct: 98801 gaaacaagagaagttggatg 98782
to top
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 409     tctttctttgtttcttctct 428
               ||||||||||||||||||||
Sbjct: 2095159 tctttctttgtttcttctct 2095140
to top
>gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, complete sequence
          Length = 174588

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 50  tagagaagaggaaacaagagaagt 73
           ||||||||||||||| ||||||||
Sbjct: 346 tagagaagaggaaaccagagaagt 323
to top
>gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 159386

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   cttctctcctgaagaaaatg 441
             ||||||||||||||||||||
Sbjct: 89372 cttctctcctgaagaaaatg 89391
to top
>gb|AC091911.3| Homo sapiens chromosome 5 clone RP11-211K15, complete sequence
          Length = 167553

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 433  aagaaaatgggaaaaattgc 452
            ||||||||||||||||||||
Sbjct: 2865 aagaaaatgggaaaaattgc 2846
to top
>emb|CR361553.4| Mouse DNA sequence from clone RP24-456I14 on chromosome X, complete
             sequence
          Length = 52670

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   gtagtgatatagctggatct 381
             ||||||||||||||||||||
Sbjct: 49099 gtagtgatatagctggatct 49118
to top
>gb|AC011689.6|AC011689 Homo sapiens chromosome , clone RP11-15J13, complete sequence
          Length = 49910

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 50   tagagaagaggaaacaagagaagt 73
            ||||||||||||||| ||||||||
Sbjct: 1656 tagagaagaggaaaccagagaagt 1679
to top
>gb|AC157364.6| Mus musculus chromosome 3, clone RP23-324P1, complete sequence
          Length = 198706

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 518    taaaaactgaagctgaattt 537
              ||||||||||||||||||||
Sbjct: 126395 taaaaactgaagctgaattt 126376
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 396      tgaagaacttgcatctttct 415
                ||||||||||||||||||||
Sbjct: 11240715 tgaagaacttgcatctttct 11240734
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 169      acggaaaataagaaaattgt 188
                ||||||||||||||||||||
Sbjct: 24731626 acggaaaataagaaaattgt 24731645
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>dbj|AB210690.1| Ciona intestinalis mRNA for transcription factor protein, complete
           cds, clone: cidg815m14
          Length = 1114

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 439 atgggaaaaattgcaatgca 458
           ||||||||||||||||||||
Sbjct: 760 atgggaaaaattgcaatgca 779
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>gb|AC159105.2| Mus musculus BAC clone RP23-248P15 from chromosome 13, complete sequence
          Length = 182994

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    tctttctttgtttcttctct 428
              ||||||||||||||||||||
Sbjct: 124651 tctttctttgtttcttctct 124670
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>gb|AC131340.4| Mus musculus BAC clone RP23-472G22 from chromosome 6, complete sequence
          Length = 194040

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   tctttctttgtttcttctct 428
             ||||||||||||||||||||
Sbjct: 77164 tctttctttgtttcttctct 77145
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>gb|AC010739.3| Homo sapiens BAC clone RP11-478M12 from 2, complete sequence
          Length = 180226

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   tttctttgtttcttctctcc 430
             ||||||||||||||||||||
Sbjct: 49204 tttctttgtttcttctctcc 49185
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>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence
          Length = 198278

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 391   agctgtgaagaacttgcatc 410
             ||||||||||||||||||||
Sbjct: 69446 agctgtgaagaacttgcatc 69465
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>gb|AC006560.8| Homo sapiens 12 BAC RPCI11-792F18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 202478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   tctttctttgtttcttctct 428
             ||||||||||||||||||||
Sbjct: 10017 tctttctttgtttcttctct 10036
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F01
          Length = 163671

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    tgaagaacttgcatctttct 415
              ||||||||||||||||||||
Sbjct: 160416 tgaagaacttgcatctttct 160435
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>gb|AC064853.6| Homo sapiens BAC clone RP11-185H21 from 2, complete sequence
          Length = 137247

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   gttcaagaaaagcaaagaac 336
             ||||||||||||||||||||
Sbjct: 21213 gttcaagaaaagcaaagaac 21232
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>gb|AC016412.12| Homo sapiens chromosome 8, clone RP11-9B18, complete sequence
          Length = 131000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   tctttgtttcttctctcctg 432
             ||||||||||||||||||||
Sbjct: 57143 tctttgtttcttctctcctg 57124
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>dbj|AB083181.1| Ciona intestinalis CiAxp83.9 mRNA for axonemal p83.9, complete cds
          Length = 2372

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  catctttctttgtttcttct 426
            ||||||||||||||||||||
Sbjct: 1031 catctttctttgtttcttct 1012
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   tgaagaacttgcatctttct 415
             ||||||||||||||||||||
Sbjct: 63297 tgaagaacttgcatctttct 63316
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>dbj|AK174735.1| Ciona intestinalis cDNA, clone:ciht008k18, full insert sequence
          Length = 1099

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 439 atgggaaaaattgcaatgca 458
           ||||||||||||||||||||
Sbjct: 751 atgggaaaaattgcaatgca 770
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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0040H10
          Length = 132919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   acggaaaataagaaaattgt 188
             ||||||||||||||||||||
Sbjct: 87563 acggaaaataagaaaattgt 87582
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>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0042H24
          Length = 186313

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   tgaagaacttgcatctttct 415
             ||||||||||||||||||||
Sbjct: 75887 tgaagaacttgcatctttct 75906
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>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence
          Length = 222792

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    tttcactaaaactaaaaact 525
              ||||||||||||||||||||
Sbjct: 162729 tttcactaaaactaaaaact 162710
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>gb|AC174383.3| Mus musculus BAC clone RP23-244A20 from chromosome 18, complete sequence
          Length = 216950

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 503    tgatttcactaaaactaaaaactgaagc 530
              |||||||| ||||| |||||||||||||
Sbjct: 149550 tgatttcattaaaattaaaaactgaagc 149523
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>gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequence
          Length = 161035

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    agagaagaggaaacaagaga 70
             ||||||||||||||||||||
Sbjct: 94854 agagaagaggaaacaagaga 94873
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>dbj|AK116639.1| Ciona intestinalis cDNA, clone:cits050e19, full insert sequence
          Length = 2352

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 407  catctttctttgtttcttct 426
            ||||||||||||||||||||
Sbjct: 1009 catctttctttgtttcttct 990
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>emb|AM084415.1| Enterobacteria phage K1E, complete genome
          Length = 45251

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 333   gaacacgtttctcctctgca 352
             ||||||||||||||||||||
Sbjct: 13436 gaacacgtttctcctctgca 13417
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>dbj|AP006702.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588a,
            complete sequence
          Length = 24912

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 512  taaaactaaaaactgaagct 531
            ||||||||||||||||||||
Sbjct: 9099 taaaactaaaaactgaagct 9080
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>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   taaaactaaaaactgaagct 531
             ||||||||||||||||||||
Sbjct: 95916 taaaactaaaaactgaagct 95897
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 51      agagaagaggaaacaagaga 70
               ||||||||||||||||||||
Sbjct: 1435322 agagaagaggaaacaagaga 1435341
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>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete
             sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   agaaaatgggaaaaattgca 453
             ||||||||||||||||||||
Sbjct: 37721 agaaaatgggaaaaattgca 37702
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>gb|AC122116.9| Mus musculus chromosome 7, clone RP23-449M8, complete sequence
          Length = 173990

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 478    aagatcgtgttcagttgtttcagt 501
              ||||||||| ||||||||||||||
Sbjct: 141976 aagatcgtgctcagttgtttcagt 141953
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>emb|AL691503.6| Mouse DNA sequence from clone RP23-47N17 on chromosome X, complete
              sequence
          Length = 219711

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    tctttctttgtttcttctct 428
              ||||||||||||||||||||
Sbjct: 125605 tctttctttgtttcttctct 125624
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>gb|AC171207.2| Mus musculus BAC clone RP23-339A3 from chromosome 3, complete sequence
          Length = 190395

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 364   agtgatatagctggatctgg 383
             ||||||||||||||||||||
Sbjct: 52488 agtgatatagctggatctgg 52507
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>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 478  aagatcgtgttcagttgtttcagt 501
            ||||||||| ||||||||||||||
Sbjct: 6827 aagatcgtgctcagttgtttcagt 6804
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>gb|M73776.1|FLAN2NAE Influenza virus A/Mallard/New York/6874/78 (H3N2), hemagglutin (seg
           4) RNA
          Length = 1765

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 576 agttgctgaaggatttgctg 595
           ||||||||||||||||||||
Sbjct: 366 agttgctgaaggatttgctg 347


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,789,047
Number of Sequences: 3902068
Number of extensions: 7789047
Number of successful extensions: 179857
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 179065
Number of HSP's gapped (non-prelim): 788
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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