| Clone Name | bags30l18 |
|---|---|
| Clone Library Name | barley_pub |
>MORC4_MOUSE (Q8BMD7) MORC family CW-type zinc finger 4 (Zinc finger CW-type| coiled-coil domain protein 2) Length = 928 Score = 73.9 bits (180), Expect = 1e-13 Identities = 47/128 (36%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Frame = +1 Query: 1 TMRLGADVIVFTQNQKNWTPTRSIGLLSYTFLMETGCDDVLVPTVDYHYDLTTSSYTQLL 180 +MRLG D +VFT+N T ++GLLS T+L V+VP V + + +++ Sbjct: 129 SMRLGKDALVFTKNGN----TLAVGLLSQTYLECIQAQAVIVPIVPF-----SQQNKKMI 179 Query: 181 RHNQKLXSSNLAILLKWSPFGSEAELLKQFDDM-GEHGTKIIVFNLWFNDDGDMELDFNS 357 L S L +L +S F E +LL QFD + G+ GT+++++N+ N DG ELDF++ Sbjct: 180 VTEDSLPS--LEAILNYSIFNCEKDLLSQFDAIPGKKGTRVLIWNIRRNKDGKSELDFDT 237 Query: 358 DKKDILIT 381 D+ DIL++ Sbjct: 238 DQYDILVS 245
>MORC4_HUMAN (Q8TE76) MORC family CW-type zinc finger 4 (Zinc finger CW-type| coiled-coil domain protein 2) Length = 937 Score = 71.2 bits (173), Expect = 9e-13 Identities = 46/133 (34%), Positives = 77/133 (57%), Gaps = 6/133 (4%) Frame = +1 Query: 1 TMRLGADVIVFTQNQKNWTPTRSIGLLSYTFLMETGCDDVLVPTVDYHYDLTTSSYTQLL 180 +MRLG D +VFT+N T ++GLLS T+L V+VP V ++ Sbjct: 129 SMRLGKDALVFTKNGG----TLTVGLLSQTYLECVQAQAVIVPIVPFN------------ 172 Query: 181 RHNQKLXSS-----NLAILLKWSPFGSEAELLKQFDDM-GEHGTKIIVFNLWFNDDGDME 342 + N+K+ + +L +L +S F E +LL QFD + G+ GT+++++N+ N +G E Sbjct: 173 QQNKKMIITEDSLPSLEAILNYSIFNRENDLLAQFDAIPGKKGTRVLIWNIRRNKNGKSE 232 Query: 343 LDFNSDKKDILIT 381 LDF++D+ DIL++ Sbjct: 233 LDFDTDQYDILVS 245
>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type| coiled-coil domain protein 1) Length = 970 Score = 66.2 bits (160), Expect = 3e-11 Identities = 42/125 (33%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Frame = +1 Query: 1 TMRLGADVIVFTQNQKNWTPTRSIGLLSYTFLMETGCDDVLVPTVDYHYDLTTSSYTQLL 180 +MR+G D I+FT+ + T LS TF E G D+V+VP ++ + + + Sbjct: 46 SMRIGKDFILFTKKEDTMTCL----FLSRTFHEEEGIDEVIVPLPTWN-----ARTREPV 96 Query: 181 RHNQKLXSSNLAILLKWSPFGSEAELLKQFDDM-GEHGTKIIVFNLWFNDDGDMELDFNS 357 N + + ++ K+SPF +E E++ QF + G+ GT +I+FNL D+G+ ELD S Sbjct: 97 TDNVEKFAIETELIYKYSPFRTEEEVMTQFMKIPGDSGTLVIIFNLKLMDNGEPELDIIS 156 Query: 358 DKKDI 372 + +DI Sbjct: 157 NPRDI 161
>MORC3_HUMAN (Q14149) MORC family CW-type zinc finger 3 (Zinc finger CW-type| coiled-coil domain protein 3) Length = 939 Score = 64.3 bits (155), Expect = 1e-10 Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Frame = +1 Query: 1 TMRLGADVIVFTQNQKNWTPTRSIGLLSYTFLMETGCDDVLVPTVDYHYDLTTSSYTQLL 180 +MRLG D IVFT+N + + S+GLLS T+L + V+VP V + + + Q++ Sbjct: 108 SMRLGKDAIVFTKNGE----SMSVGLLSQTYLEVIKAEHVVVPIVAF------NKHRQMI 157 Query: 181 RHNQKLXSSNLAILLKWSPFGSEAELLKQFDD-MGEHGTKIIVFNLWFNDDGDMELDFNS 357 N ++LA +L+ S F +E +LL + D +G+ GT+II++NL + E DF Sbjct: 158 --NLAESKASLAAILEHSLFSTEQKLLAELDAIIGKKGTRIIIWNLRSYKNA-TEFDFEK 214 Query: 358 DKKDILI 378 DK DI I Sbjct: 215 DKYDIRI 221
>DMD_MOUSE (P11531) Dystrophin| Length = 3678 Score = 32.3 bits (72), Expect = 0.48 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -3 Query: 408 VSFDLLLCPSN-----EDILLIGVEIKLHVPIIIEPEVEYNYLCPVLSHIIELFKQLS 250 + F L P+N E+ +I E+K+H+P + VE + LSH + L+K LS Sbjct: 1458 MKFRLFQKPANFEQRLEESKMILDEVKMHLPALETKSVEQEVIQSQLSHCVNLYKSLS 1515
>DMD_CANFA (O97592) Dystrophin| Length = 3680 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -3 Query: 408 VSFDLLLCPSN-----EDILLIGVEIKLHVPIIIEPEVEYNYLCPVLSHIIELFKQLS 250 + F L P+N ++ +I E+K+H+P + VE + L+H + L+K LS Sbjct: 1458 MKFRLFQKPANFEQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYKSLS 1515
>DMD_HUMAN (P11532) Dystrophin| Length = 3685 Score = 29.6 bits (65), Expect = 3.1 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -3 Query: 408 VSFDLLLCPSN-----EDILLIGVEIKLHVPIIIEPEVEYNYLCPVLSHIIELFKQLS 250 + F L P+N ++ +I E+K+H+P + VE + L+H + L+K LS Sbjct: 1456 MKFRLFQKPANFEQRLQESKMILDEVKMHLPALETKSVEQEVVQSQLNHCVNLYKSLS 1513
>PPCK_AZOSE (Q5P2P8) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 614 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Frame = +3 Query: 150 SYNFFVYSAVTS*SETLXF*FG-------DPFEMVPF 239 ++NF VY A T SET FG DPF M+PF Sbjct: 442 NWNFGVYMAATLGSETTAAAFGAQGVVRRDPFAMLPF 478
>KTR7_YEAST (P40504) Probable mannosyltransferase KTR7 (EC 2.4.1.131)| Length = 517 Score = 28.9 bits (63), Expect = 5.3 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 6/79 (7%) Frame = +1 Query: 127 PTVDYHYDLTTSSYTQLLRHNQKLXSSNLAILLKWSP---FGSEAELLKQFDDMGEH-GT 294 P VD+ D++ + ++ +HN+K + L L W+ F + +K+ + E+ GT Sbjct: 217 PDVDFFCDISYDPFFEMAKHNKKYGFTVLITELYWTVPNLFRTTKSFIKKTAGLKENLGT 276 Query: 295 --KIIVFNLWFNDDGDMEL 345 K+ FN D D E+ Sbjct: 277 LWKLFTFNYNILDTDDEEI 295
>DMD_PIG (Q5GN48) Dystrophin| Length = 3674 Score = 28.9 bits (63), Expect = 5.3 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -3 Query: 408 VSFDLLLCPSN-----EDILLIGVEIKLHVPIIIEPEVEYNYLCPVLSHIIELFKQLS 250 + F L P+N ++ +I E+K+H+P + VE + L+H + L+K LS Sbjct: 1452 MKFRLFQKPANFEQRLQESKMILDEVKMHLPALEIKSVEQEVVQSQLNHCVNLYKSLS 1509
>SENP3_HUMAN (Q9H4L4) Sentrin-specific protease 3 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP3) (SUMO-1-specific protease 3) Length = 574 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -2 Query: 205 KXRVSDYDVTAEYTKKL*DRNGSLLLAPIH---HRSLFPSEMCKKEDQYF 65 K R YD +TK + N LLL PIH H SL ++ ++ YF Sbjct: 432 KLRTKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYF 481
>YK54_YEAST (P36154) Hypothetical 18.4 kDa protein in SIS2-MTD1 intergenic| region Length = 155 Score = 28.5 bits (62), Expect = 6.9 Identities = 13/45 (28%), Positives = 23/45 (51%) Frame = +1 Query: 286 HGTKIIVFNLWFNDDGDMELDFNSDKKDILITGAQKKVKTNKHXK 420 HG+K + + F+ D D LD +DKK + G + + + + K Sbjct: 97 HGSKTVNLVINFDHDDDWTLDIENDKKKLFEYGIENETEISLFNK 141
>SENP3_MOUSE (Q9EP97) Sentrin-specific protease 3 (EC 3.4.22.-)| (Sentrin/SUMO-specific protease SENP3) (SUMO-1-specific protease 3) (Smt3-specific isopeptidase 1) (Smt3ip1) Length = 568 Score = 28.5 bits (62), Expect = 6.9 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -2 Query: 205 KXRVSDYDVTAEYTKKL*DRNGSLLLAPIH---HRSLFPSEMCKKEDQYF 65 K R YD +TK + N LLL PIH H SL ++ ++ YF Sbjct: 426 KLRTKGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISVDVRRRTITYF 475
>PCXA_PSEPU (P00436) Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)| (3,4-PCD) Length = 200 Score = 28.1 bits (61), Expect = 9.0 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -3 Query: 378 NEDILLIGVEIKLHVPIIIEPEVEYNYLCPVLSHIIELFKQLSFATKR 235 N + G+ I LH + + E + N CPVL+ I + ++ + KR Sbjct: 127 NISLFARGINIHLHTRLYFDDEAQANAKCPVLNLIEQPQRRETLIAKR 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,146,042 Number of Sequences: 219361 Number of extensions: 1080882 Number of successful extensions: 2932 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2925 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2336739400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)