ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags31a10 |
|---|---|
| Clone Library Name | barley_pub |
>ATPO_IPOBA (P22778) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 244 Score = 64.7 bits (156), Expect = 5e-11 Identities = 33/64 (51%), Positives = 39/64 (60%) Frame = +1 Query: 169 ENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFIKDSSV 348 E KIKVP +YG +GNY EKVESE+ D+V A KKSP FSQF++D SV Sbjct: 53 EQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSV 112 Query: 349 PKAT 360 P T Sbjct: 113 PVDT 116
>ATPO_ARATH (Q96251) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 238 Score = 53.9 bits (128), Expect = 9e-08 Identities = 28/88 (31%), Positives = 48/88 (54%) Frame = +1 Query: 97 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 276 +++ S ++ R AT + N +KVP AL G GN+ EK+E+ Sbjct: 21 VSSVRSKSLFPALRTYATASAQTTAN-VKVPIALVGENGNFASWLYIAAVKMNSLEKIET 79 Query: 277 EIGDVVGAVKKSPMFSQFIKDSSVPKAT 360 ++ +++ A+K +P+F+QF KD SVP+ T Sbjct: 80 DLSEMIEAMKTAPIFAQFTKDPSVPRGT 107
>ATPO_BOVIN (P13621) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 32.7 bits (73), Expect = 0.22 Identities = 21/87 (24%), Positives = 38/87 (43%) Frame = +1 Query: 97 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 276 +AA + ++Q R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MAALAVSGLSQQVRCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 277 EIGDVVGAVKKSPMFSQFIKDSSVPKA 357 E+ VG + K P + + + V ++ Sbjct: 61 ELLR-VGQILKEPKMAASLLNPYVKRS 86
>ATPO_PEA (P17604) ATP synthase delta chain, mitochondrial (EC 3.6.3.14)| (Oligomycin sensitivity conferral protein) (OSCP) (Fragment) Length = 38 Score = 32.3 bits (72), Expect = 0.29 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 151 QVDKPAENKIKVPKALYGGTGNY 219 QV E KIKVP A++GG+GNY Sbjct: 2 QVPGZKETKIKVPIAMFGGSGNY 24
>ATPO_RAT (Q06647) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 32.0 bits (71), Expect = 0.38 Identities = 19/76 (25%), Positives = 34/76 (44%) Frame = +1 Query: 97 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 276 +AA ++ +++ R +T V +P ++ P +YG G Y ++VE Sbjct: 1 MAAPATSVLSRQVRSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEK 60 Query: 277 EIGDVVGAVKKSPMFS 324 E+ VG + K P S Sbjct: 61 ELLR-VGQLLKDPKVS 75
>ATPO_MOUSE (Q9DB20) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 31.6 bits (70), Expect = 0.50 Identities = 19/76 (25%), Positives = 34/76 (44%) Frame = +1 Query: 97 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 276 +AA ++ +++ R +T V +P ++ P +YG G Y ++VE Sbjct: 1 MAAPAASGLSRQVRSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEK 60 Query: 277 EIGDVVGAVKKSPMFS 324 E+ VG + K P S Sbjct: 61 ELLR-VGQLLKDPKVS 75
>ATPO_PONPY (Q5RD23) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 30.8 bits (68), Expect = 0.85 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Frame = +1 Query: 97 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 276 +A + +++ R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MATPAVSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 277 EIGDVVGAVKK----SPMFSQFIKDS 342 E+ V +K+ +P+ + ++K S Sbjct: 61 ELLRVAQILKEPKVAAPVLNPYVKRS 86
>ATPO_HUMAN (P48047) ATP synthase O subunit, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) Length = 213 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/71 (23%), Positives = 31/71 (43%) Frame = +1 Query: 97 LAATESAAVAQVSRGLATQVDKPAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVES 276 +AA + +++ R +T V +P ++ P +YG G Y E+VE Sbjct: 1 MAAPAVSGLSRQVRCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEK 60 Query: 277 EIGDVVGAVKK 309 E+ V +K+ Sbjct: 61 ELLRVAQILKE 71
>ATPO_SCHPO (O74479) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 216 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/49 (26%), Positives = 21/49 (42%) Frame = +1 Query: 187 PKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQFI 333 P LYG G+Y + VE + + G +++ P F Q+I Sbjct: 33 PVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYI 81
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3371 Score = 28.9 bits (63), Expect = 3.2 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = -3 Query: 243 CCKEQRTSVVAGATIQSFWNLYLVLRRLIHLR 148 C +E+R +VV IQS++ ++ LR+ IHLR Sbjct: 1393 CAQEERAAVV----IQSWYRMHRELRKYIHLR 1420
>YQAJ_BACSU (P45907) Hypothetical protein yqaJ| Length = 319 Score = 28.9 bits (63), Expect = 3.2 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = +1 Query: 160 KPAENKIK--VPKALYGGTGNYXXXXXXXXXXXXXXEKVESEIGDVVGAVKKSPMFSQF- 330 K EN+IK + A YG GNY +K++ + DV VKK F +F Sbjct: 255 KELENQIKHEMKDAEYGFIGNYQACWKPVVSNRIDTKKLKDQFPDVYEKVKKETHFRRFG 314 Query: 331 IKDSS 345 IK+ S Sbjct: 315 IKEVS 319
>POL_JSRV (P31623) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 870 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = -3 Query: 318 HRALLDCPYNIANLGFNFF--QRICVGCCKEQRTSVVAGATIQSFWNLYLVLRRLIHLRR 145 H+ALL P + FN F VG + T + G T NL+ ++++++H R+ Sbjct: 500 HQALLTVPTS-----FNLFTDSSYVVGALQMIETVPIIGTTSPEVLNLFTLIQQVLHCRQ 554 Query: 144 KP 139 P Sbjct: 555 HP 556
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%) Frame = +3 Query: 180 KGSKSSVW--WHRQLR*CVVPCSSQRKFVGKS*IR-DW 284 K S W W+R R C + C R F+G + I DW Sbjct: 1162 KDGNSCAWCPWYRFCRGCKIDCGEDRAFIGNAYIAVDW 1199
>ATPO_NEUCR (Q9P602) ATP synthase subunit 5, mitochondrial precursor (EC| 3.6.3.14) (Oligomycin sensitivity conferral protein) (OSCP) (ATP synthase chain 5) Length = 220 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 5/85 (5%) Frame = +1 Query: 118 AVAQVSRGLATQVDK-----PAENKIKVPKALYGGTGNYXXXXXXXXXXXXXXEKVESEI 282 A+ + +R L TQV A +K+K P L+G G Y E I Sbjct: 6 ALLRPARVLNTQVRTYAAAAAASSKVKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAI 65 Query: 283 GDVVGAVKKSPMFSQFIKDSSVPKA 357 + + K P + ++ ++ A Sbjct: 66 SSLGNLLAKDPKLASILETPTLSPA 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.127 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,048,084 Number of Sequences: 219361 Number of extensions: 527396 Number of successful extensions: 919 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 911 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 919 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
