ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags31a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DET1_LYCES (Q9ZNU6) Light-mediated development protein DET1 (Dee... 116 6e-60
2DET1_ARATH (P48732) Light-mediated development protein DET1 (DEE... 94 3e-48
3DET1_MOUSE (Q9D0A0) DET1 homolog (De-etiolated-1 homolog) 37 0.053
4DET1_HUMAN (Q7L5Y6) DET1 homolog (De-etiolated-1 homolog) 37 0.053
5ADAM7_HUMAN (Q9H2U9) ADAM 7 precursor (A disintegrin and metallo... 28 1.4
6ZNF18_MOUSE (Q810A1) Zinc finger protein 18 (Zinc finger protein... 31 2.2
7FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor 31 2.9
8ADAM7_MACFA (Q28475) ADAM 7 precursor (A disintegrin and metallo... 25 2.9
9SMYD5_HUMAN (Q6GMV2) SET and MYND domain-containing protein 5 (P... 30 3.8
10SMYD5_MOUSE (Q3TYX3) SET and MYND domain-containing protein 5 (P... 30 3.8
11BINB2_BACSH (P18568) Larvicidal toxin 51 kDa protein (Strain 2297) 30 4.9
12BINB1_BACSH (P10565) Larvicidal toxin 51 kDa protein (Strains 15... 30 4.9
13ZNF18_RAT (Q642B9) Zinc finger protein 18 (Zinc finger protein 535) 30 6.4
14NAS14_CAEEL (Q19269) Zinc metalloproteinase nas-14 precursor (EC... 30 6.4
15NOEJ_RHISN (P55357) Mannose-1-phosphate guanylyltransferase [GDP... 29 8.4

>DET1_LYCES (Q9ZNU6) Light-mediated development protein DET1 (Deetiolated1|
           homolog) (tDET1) (High pigmentation protein 2) (Protein
           dark green)
          Length = 523

 Score =  116 bits (291), Expect(4) = 6e-60
 Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +1

Query: 142 LIVYRPIWLTFSCHEE-CDSHDLPANAERFDSFFKQLYSISLASSNEYICKDFFLYMECH 318
           L+VYRP WLTFSC EE CD+HDLP  A +F+SFF QLYS++LASS E ICKDFFLYME +
Sbjct: 71  LVVYRPTWLTFSCKEEDCDTHDLPLKARKFESFFTQLYSVTLASSGELICKDFFLYMESN 130

Query: 319 QYGLFATSTAQSND 360
           Q+GLFATSTAQ +D
Sbjct: 131 QFGLFATSTAQIHD 144



 Score = 83.6 bits (205), Expect(4) = 6e-60
 Identities = 38/52 (73%), Positives = 47/52 (90%)
 Frame = +2

Query: 371 TEGAIHGVPSIEKITFYLVRLEDGAILDEKAFCNDFINLAHSIGAYLYEDLV 526
           T GAI GVPS+EKITF+L+RL DGAILDE+ F ND++NLAHSIGA+LY+DL+
Sbjct: 148 TGGAIQGVPSVEKITFHLLRLVDGAILDERVFHNDYVNLAHSIGAFLYDDLL 199



 Score = 70.5 bits (171), Expect(4) = 6e-60
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +3

Query: 30  NLVPSYTIYDINCPDYSFRKFTDDGKYLVAFSRNHQ 137
           N+VPSYTIYD+ CPD+SFRKFTDDG Y V+FSRNHQ
Sbjct: 34  NVVPSYTIYDVECPDHSFRKFTDDGLYFVSFSRNHQ 69



 Score = 21.6 bits (44), Expect(4) = 6e-60
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 531 IVSLRYQTIH 560
           IVSLRYQ IH
Sbjct: 201 IVSLRYQRIH 210



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>DET1_ARATH (P48732) Light-mediated development protein DET1 (DEETIOLATED1|
           protein)
          Length = 541

 Score = 93.6 bits (231), Expect(3) = 3e-48
 Identities = 46/75 (61%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = +1

Query: 142 LIVYRPIWLTFSCHEECDSH--DLPANAERFDSFFKQLYSISLASSNEYICKDFFLYMEC 315
           LIVYRP WLT+S  ++  +    LP  A +FDSFF QLYS++LASSNE ICKDFFLY + 
Sbjct: 71  LIVYRPSWLTYSTTDDSTTTLPPLPRRASKFDSFFTQLYSVNLASSNELICKDFFLYHQT 130

Query: 316 HQYGLFATSTAQSND 360
            ++GLFATSTAQ +D
Sbjct: 131 RRFGLFATSTAQIHD 145



 Score = 75.9 bits (185), Expect(3) = 3e-48
 Identities = 34/62 (54%), Positives = 50/62 (80%)
 Frame = +2

Query: 341 QLHKVMTSSVTEGAIHGVPSIEKITFYLVRLEDGAILDEKAFCNDFINLAHSIGAYLYED 520
           Q+H   +SS +  A+ GVPSI+KITF L+RL+DG +LDE+ F +DF+NLAH++G +LY+D
Sbjct: 142 QIHD--SSSPSNDAVPGVPSIDKITFVLLRLDDGVVLDERVFLHDFVNLAHNMGVFLYDD 199

Query: 521 LV 526
           L+
Sbjct: 200 LL 201



 Score = 63.2 bits (152), Expect(3) = 3e-48
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = +3

Query: 30  NLVPSYTIYDINCPDYSFRKFTDDGKYLVAFSRNHQ 137
           NLVPSYT+YD+  PD+ FRKFT+DG +L++FSRNHQ
Sbjct: 34  NLVPSYTLYDVESPDHCFRKFTEDGLFLISFSRNHQ 69



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>DET1_MOUSE (Q9D0A0) DET1 homolog (De-etiolated-1 homolog)|
          Length = 550

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 27  RNLVPSYTIYDINCPDYSFRKFTDDGKYLVAFSRNHQXFD 146
           +N+ P++T+ ++  P    RKF+ DG+Y +AFS +    +
Sbjct: 44  QNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSSDQTSLE 83



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = +2

Query: 401 IEKITFYLVRLEDGAILDEKAFCNDFINLAHSIGAYLYEDLV 526
           +E  + +++ L  G + D + F  D + L+H+ G YLY++++
Sbjct: 188 LEDYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNIL 229



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>DET1_HUMAN (Q7L5Y6) DET1 homolog (De-etiolated-1 homolog)|
          Length = 550

 Score = 36.6 bits (83), Expect = 0.053
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 27  RNLVPSYTIYDINCPDYSFRKFTDDGKYLVAFSRNHQXFD 146
           +N+ P++T+ ++  P    RKF+ DG+Y +AFS +    +
Sbjct: 44  QNVFPNFTVVNVEKPPCFLRKFSPDGRYFIAFSSDQTSLE 83



 Score = 31.2 bits (69), Expect = 2.2
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = +2

Query: 401 IEKITFYLVRLEDGAILDEKAFCNDFINLAHSIGAYLYEDLV 526
           +E  + +++ L  G + D + F  D + L+H+ G YLY++++
Sbjct: 188 LEDYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNIL 229



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>ADAM7_HUMAN (Q9H2U9) ADAM 7 precursor (A disintegrin and metalloproteinase|
           domain 7) (Sperm maturation-related glycoprotein GP-83)
          Length = 754

 Score = 28.5 bits (62), Expect(2) = 1.4
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +1

Query: 286 CKDFFLYMECHQYGLFATSTAQSNDFKCH*G--CNSWCTIN*ENNFLSCKARRWCN 447
           CK  FLY +    GL A+ T      KC  G  CN+   +N E  ++S      CN
Sbjct: 589 CKTIFLYHDSTDIGLVASGT------KCGEGMVCNNGECLNMEKVYISTNCPSQCN 638



 Score = 21.9 bits (45), Expect(2) = 1.4
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 462 LSATILSIWLIVLVLTCMRIWFCIVSLRYQ 551
           L  T ++I ++VLVL  + I   I+ +RY+
Sbjct: 664 LHVTNITILVVVLVLVIVGIGVLILLVRYR 693



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>ZNF18_MOUSE (Q810A1) Zinc finger protein 18 (Zinc finger protein 535)|
          Length = 556

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 301 GKSPYRCTHCWMQVRWS 251
           G+ PY+CTHC  Q  WS
Sbjct: 523 GEKPYKCTHCGKQFSWS 539



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>FRAS1_MOUSE (Q80T14) Extracellular matrix protein FRAS1 precursor|
          Length = 4010

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = -1

Query: 361 SHYFVQLT--LQISHIDGTPCKGKSPYRCTHCWMQVRWSRAA*RNCQISLHWPEDHEN 194
           +H++++ T   ++ H     C+GKSP+ CT C      + A    C +S   PE H N
Sbjct: 700 THFYLESTGLCEVCHPSCLTCEGKSPHNCTGC----ESTHALLAGCCVS-QCPETHFN 752



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>ADAM7_MACFA (Q28475) ADAM 7 precursor (A disintegrin and metalloproteinase|
           domain 7) (Epididymal apical protein I) (EAP I)
          Length = 776

 Score = 24.6 bits (52), Expect(2) = 2.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 462 LSATILSIWLIVLVLTCMRIWFCIVSLRYQ 551
           L+ T ++I ++VLVL  + I   I+ +RYQ
Sbjct: 664 LNVTNVAILIVVLVLVIVGIGVLILLIRYQ 693



 Score = 24.6 bits (52), Expect(2) = 2.9
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +1

Query: 286 CKDFFLYMECHQYGLFATSTAQSNDFKCH*G--CNSWCTIN*ENNFLSCKARRWCN 447
           CK  FLY +    GL A+ T      KC  G  CN+   +N E  + S      C+
Sbjct: 589 CKTIFLYHDSTDIGLVASGT------KCGDGMVCNNGECLNMEKVYNSTNCPSQCH 638



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>SMYD5_HUMAN (Q6GMV2) SET and MYND domain-containing protein 5 (Protein NN8-4AG)|
          Length = 418

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +1

Query: 190 CDSHDL-PANAERFDSFFKQLYSISLASSNEYICKDFFLYMECHQYGLFATSTAQSNDFK 366
           CD+ +L P + E+ D+F  QLY    A++ E        ++ C   GLF   +       
Sbjct: 268 CDTLELKPQDREQLDAFIDQLYKDIEAATGE--------FLNCEGSGLFVLQSC------ 313

Query: 367 CH*GCNSWCTIN*ENNF 417
               CN  C  N E +F
Sbjct: 314 ----CNHSCVPNAETSF 326



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>SMYD5_MOUSE (Q3TYX3) SET and MYND domain-containing protein 5 (Protein NN8-4AG)|
          Length = 416

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +1

Query: 190 CDSHDL-PANAERFDSFFKQLYSISLASSNEYICKDFFLYMECHQYGLFATSTAQSNDFK 366
           CD+ +L P + E+ D+F  QLY    A++ E        ++ C   GLF   +       
Sbjct: 267 CDALELTPQDREQLDTFIDQLYKDIEAATGE--------FLNCEGSGLFVLQSC------ 312

Query: 367 CH*GCNSWCTIN*ENNF 417
               CN  C  N E +F
Sbjct: 313 ----CNHSCVPNAETSF 325



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>BINB2_BACSH (P18568) Larvicidal toxin 51 kDa protein (Strain 2297)|
          Length = 448

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 51  IYDINCPDYSFRKFTDDGKYLVAFSRNHQXFDCVPSNLVN 170
           +YD   P +  R   DDG+Y++A   + + FD  P+ L N
Sbjct: 75  MYDNKDPRFLIRFLLDDGRYIIADRDDGEVFDEAPTYLDN 114



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>BINB1_BACSH (P10565) Larvicidal toxin 51 kDa protein (Strains 1593/2362)|
          Length = 448

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 51  IYDINCPDYSFRKFTDDGKYLVAFSRNHQXFDCVPSNLVN 170
           +YD   P +  R   DDG+Y++A   + + FD  P+ L N
Sbjct: 75  MYDNKDPRFLIRFLLDDGRYIIADRDDGEVFDEAPTYLDN 114



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>ZNF18_RAT (Q642B9) Zinc finger protein 18 (Zinc finger protein 535)|
          Length = 556

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 301 GKSPYRCTHCWMQVRWS 251
           G+ PY+CTHC  +  WS
Sbjct: 523 GEKPYKCTHCGKRFSWS 539



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>NAS14_CAEEL (Q19269) Zinc metalloproteinase nas-14 precursor (EC 3.4.24.21)|
           (Nematode astacin 14)
          Length = 503

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 341 QLHKVMTSSVTEGAIHGVPSIEKITFYLVRLEDGAILDE 457
           ++  +  S + EG I GVP IEK +  L RL D  +LDE
Sbjct: 66  EIESMQNSLLFEGDIMGVPEIEK-SDILKRLRDDPLLDE 103



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>NOEJ_RHISN (P55357) Mannose-1-phosphate guanylyltransferase [GDP] (EC|
           2.7.7.22) (GDP-mannose pyrophosphorylase) (GMP)
          Length = 512

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 344 LHKVMTSSVTEGAIHGVPSIEKITFYLVRLEDGAILDEKAFCNDFINLA 490
           LH+  +  + EGAIH + +  KI   LV ++ GA L E    +D I +A
Sbjct: 453 LHENQSIYIPEGAIHRLGNPGKIMLELVEIQTGAYLGE----DDIIRVA 497


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,115,799
Number of Sequences: 219361
Number of extensions: 1446261
Number of successful extensions: 4013
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4011
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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