>MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 601

 Score = 72.8 bits (177), Expect(2) = 9e-14
 Identities = 33/74 (44%), Positives = 47/74 (63%)
 Frame = +2

Query: 38  DAIRKGILFPSISSIRHITXXXXXXXXXXXXDEDLAEGCSDMDPRDLRSMSESDTVDYVA 217
           D I +GIL+PSI  IR IT             EDLAEG  D+  ++L+ MS+ +T+++V 
Sbjct: 528 DEINRGILYPSIDDIRDITAEVGAAVLRAAVAEDLAEGHGDVGVKELQHMSKEETIEHVR 587

Query: 218 RKMWYPVYSPLVND 259
           + MWYPVY PLV++
Sbjct: 588 QNMWYPVYGPLVHE 601



 Score = 22.7 bits (47), Expect(2) = 9e-14
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +1

Query: 1   AAAECLASYIT 33
           AAAECLASY++
Sbjct: 516 AAAECLASYMS 526

>MAOM_SOLTU (P37221) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 626

 Score = 63.2 bits (152), Expect(2) = 2e-11
 Identities = 31/75 (41%), Positives = 42/75 (56%)
 Frame = +2

Query: 38  DAIRKGILFPSISSIRHITXXXXXXXXXXXXDEDLAEGCSDMDPRDLRSMSESDTVDYVA 217
           + + KGI++PSIS IR IT            +EDLAEG  +MD R+LR + E+   ++V 
Sbjct: 551 EEVLKGIIYPSISRIRDITKEVAAAVVKEAIEEDLAEGYREMDSRELRKLDEAQISEFVE 610

Query: 218 RKMWYPVYSPLVNDK 262
             MW P Y  LV  K
Sbjct: 611 NNMWSPDYPTLVYKK 625



 Score = 24.3 bits (51), Expect(2) = 2e-11
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +1

Query: 1   AAAECLASYIT 33
           AAAECLA+YIT
Sbjct: 539 AAAECLAAYIT 549

>MAOM_AMAHP (P37224) NAD-dependent malic enzyme 65 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 623

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = +2

Query: 38  DAIRKGILFPSISSIRHITXXXXXXXXXXXXDEDLAEGCSDMDPRDLRSMSESDTVDYVA 217
           + +  G+++PSIS IR IT            +EDLAEG  DMD R+L+ ++E   ++Y+ 
Sbjct: 548 EEVINGVIYPSISRIRDITKEVAAAVIKEAVEEDLAEGYRDMDARELQKLNEEQILEYIE 607

Query: 218 RKMWYPVYSPLVNDK 262
           + MW P Y  LV  K
Sbjct: 608 KNMWNPEYPTLVYKK 622

>DNBI_SHV21 (P24910) Major DNA-binding protein|
          Length = 1128

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 325 NTLLFRFSCSTWEHFSRYCCHVYWLCCCLICL 420
           N + FR +  T  H   YCC+V+W   C + L
Sbjct: 584 NNINFRETIKTVHHVLHYCCNVFWQAPCAMFL 615

>POU1_DUGJA (P31370) POU domain protein 1 (DjPOU1)|
          Length = 559

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 175 VPRIHVRASLGQIFINSSTGDCSADTCGDVPDT*N*RKEDSFSNC 41
           V R+ +R    QI IN     C A++ G VPDT   ++ D+ S C
Sbjct: 468 VKRLKIRKEPDQISINDENTSCRAESSGIVPDTHYRQECDNHSIC 512

>ALG8_ARATH (O80505) Probable dolichyl pyrophosphate Glc1Man9GlcNAc2|
           alpha-1,3-glucosyltransferase (EC 2.4.1.-)
           (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
           glucosyltransferase)
          Length = 383

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 20/84 (23%), Positives = 35/84 (41%)
 Frame = +3

Query: 93  PHVSALQSPVLLLMKIWPRDALTWILGTSGACQSRIRWITWLGRCGTLFTAHL*MTSSVR 272
           P ++ L +  ++L+ I P     W    SG      RW+ +   CG LF  H+   +S+ 
Sbjct: 275 PQITPLTTFAMVLLAISPCLIKAWKKPHSGLVA---RWVAYAYTCGFLFGWHVHEKASLH 331

Query: 273 RSTPEETYQAHTFVLISEYFAISV 344
            + P       +      YF +S+
Sbjct: 332 FTIPLAIVAVQSLEDAKHYFLVSI 355

>MATK_CARAN (Q9GF55) Maturase K (Intron maturase)|
          Length = 504

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 304 IHLF*LVNTLLFRFSCSTWEHFSRYCCHVYWLC 402
           IHL  LV TL +R   ++  HF R+C + Y+ C
Sbjct: 159 IHLEILVQTLRYRVKDASSLHFLRFCVYEYFNC 191

>K0406_MOUSE (Q91V83) Protein KIAA0406 homolog|
          Length = 1085

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 134 EDLAEGCSDMDPRDLRSMSESDTVDYVARKMWY 232
           ED+   C  M P +LR + +S   +Y +++ WY
Sbjct: 539 EDIHNKCPSMGPEELREIVKSILEEYTSQENWY 571

>MAOC_MAIZE (P16243) NADP-dependent malic enzyme, chloroplast precursor (EC|
           1.1.1.40) (NADP-ME)
          Length = 636

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 22/76 (28%), Positives = 28/76 (36%)
 Frame = +2

Query: 14  ALLHTSQXDAIRKGILFPSISSIRHITXXXXXXXXXXXXDEDLAEGCSDMDPRDLRSMSE 193
           AL   +  D   KG +FP  +SIR I+            +  LA           R    
Sbjct: 567 ALADQATQDNFEKGSIFPPFTSIRKISAHIAAAVAGKAYELGLA----------TRLPPP 616

Query: 194 SDTVDYVARKMWYPVY 241
           SD V Y    M+ PVY
Sbjct: 617 SDLVKYAENCMYTPVY 632

>MAVS_RAT (Q66HG9) Mitochondrial antiviral signaling protein (Interferon-beta|
           promoter stimulator protein 1) (IPS-1) (Virus-induced
           signaling adapter)
          Length = 507

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = +3

Query: 48  EKESSFLQFQVSGTSPHVSALQSPVLLLMKIWPRDALTWILGTSGACQSRIRWITWLGRC 227
           E E S  + QV   SP V  L SP  L  +  P +           C S + W  WLG  
Sbjct: 437 ENEYSSFRIQVD-KSPSVDLLGSPEPLATQQSPEE--------EEPCASSVSWAKWLGAT 487

Query: 228 GTLFTAHL 251
             L  A L
Sbjct: 488 SALLAAFL 495

>MATK_CAPHA (Q5VH41) Maturase K (Intron maturase)|
          Length = 504

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 304 IHLF*LVNTLLFRFSCSTWEHFSRYCCHVYW 396
           IHL  LV TL +R   ++  H  R+C + YW
Sbjct: 159 IHLEILVQTLRYRVKDASSLHLLRFCLYEYW 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,303,661
Number of Sequences: 219361
Number of extensions: 1388150
Number of successful extensions: 3551
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3551
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)