ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30k03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK101024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
2dbj|AK058254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
3dbj|AK070828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 2e-52
4gb|AY105653.1| Zea mays PCO079171 mRNA sequence 204 2e-49
5gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
6gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 geno... 115 1e-22
7dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 115 1e-22
9gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
10gb|AC136447.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
11gb|BC029294.1| Homo sapiens ELL associated factor 1, mRNA (cDNA ... 42 1.8
12emb|Z23002.1|MIST59KD S.tuberosum mitochondrial gene for the 59k... 42 1.8
13dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G... 42 1.8
16gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p... 42 1.8
17dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
18dbj|AK068577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
20tpd|BR000069.1| TPA: TPA_exp: Ciona intestinalis Ci-ZF(C2H2)-66 ... 42 1.8
21ref|XM_454101.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E03377g ... 40 7.1
22emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 7.1
23gb|AF353511.1|AF353511 Porcine epidemic diarrhea virus strain CV... 40 7.1
24gb|BC113247.1| Bos taurus cDNA clone IMAGE:8083724 40 7.1
25gb|AC111139.19| Mus musculus chromosome 3, clone RP23-365L12, co... 40 7.1
26gb|AC149333.2| Phakopsora pachyrhizi clone JGIAFNA-25D11, comple... 40 7.1 
>dbj|AK101024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150D19, full
            insert sequence
          Length = 2454

 Score =  222 bits (112), Expect = 9e-55
 Identities = 218/252 (86%), Gaps = 1/252 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcagctgagtgccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctt 63
            ||||||||||||||||| ||||||||||||| | |||| |||||||||||| ||||||||
Sbjct: 1870 gcagctgagtgccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctt 1928

                                                                        
Query: 64   tccttcaatttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgc 123
            ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 1929 tccatcaatctcaagtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgc 1988

                                                                        
Query: 124  tgctgttgatgaagatttggccgagggatgctctgacatggatcctcgggacctcaggag 183
             ||||||||||||||| ||||||||||  | | |||  | ||  || ||||||||| |||
Sbjct: 1989 cgctgttgatgaagatctggccgaggggcgttgtgatgtagacgctagggacctcaagag 2048

                                                                        
Query: 184  catgtcagagtcggatacggtggattacgtggctcggaagatgtggtaccctgtttacag 243
            |||| | ||| |||| || || || |  |||||||||||||||||||||||| |||||||
Sbjct: 2049 catgactgaggcggacacagtcgactttgtggctcggaagatgtggtaccctatttacag 2108

                        
Query: 244  cccacttgtgaa 255
            ||| || |||||
Sbjct: 2109 ccccctcgtgaa 2120
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>dbj|AK058254.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-C11, full
           insert sequence
          Length = 769

 Score =  222 bits (112), Expect = 9e-55
 Identities = 218/252 (86%), Gaps = 1/252 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcagctgagtgccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctt 63
           ||||||||||||||||| ||||||||||||| | |||| |||||||||||| ||||||||
Sbjct: 235 gcagctgagtgccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctt 293

                                                                       
Query: 64  tccttcaatttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgc 123
           ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 294 tccatcaatctcaagtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgc 353

                                                                       
Query: 124 tgctgttgatgaagatttggccgagggatgctctgacatggatcctcgggacctcaggag 183
            ||||||||||||||| ||||||||||  | | |||  | ||  || ||||||||| |||
Sbjct: 354 cgctgttgatgaagatctggccgaggggcgttgtgatgtagacgctagggacctcaagag 413

                                                                       
Query: 184 catgtcagagtcggatacggtggattacgtggctcggaagatgtggtaccctgtttacag 243
           |||| | ||| |||| || || || |  |||||||||||||||||||||||| |||||||
Sbjct: 414 catgactgaggcggacacagtcgactttgtggctcggaagatgtggtaccctatttacag 473

                       
Query: 244 cccacttgtgaa 255
           ||| || |||||
Sbjct: 474 ccccctcgtgaa 485
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>dbj|AK070828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065M02, full
            insert sequence
          Length = 2357

 Score =  214 bits (108), Expect = 2e-52
 Identities = 217/252 (86%), Gaps = 1/252 (0%)
 Strand = Plus / Plus

                                                                        
Query: 4    gcagctgagtgccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctt 63
            ||||||||||||||||| ||||||||||||| | |||| |||||||||||| ||||||||
Sbjct: 1789 gcagctgagtgccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctt 1847

                                                                        
Query: 64   tccttcaatttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgc 123
            ||| ||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 1848 tccatcaatctcaagtatcgggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgc 1907

                                                                        
Query: 124  tgctgttgatgaagatttggccgagggatgctctgacatggatcctcgggacctcaggag 183
             ||||||||||||||| ||||||||||  | | |||  | ||  || ||||||||| |||
Sbjct: 1908 cgctgttgatgaagatctggccgaggggcgttgtgatgtagacgctagggacctcaagag 1967

                                                                        
Query: 184  catgtcagagtcggatacggtggattacgtggctcggaagatgtggtaccctgtttacag 243
            |||| | ||| |||| || || || |  |||||||||||||||||||||||| |||||||
Sbjct: 1968 catgactgaggcggacacagtcgactttgtggctcggaagatgtggtaccctatttacag 2027

                        
Query: 244  cccacttgtgaa 255
            ||| || |||||
Sbjct: 2028 ccccctcgtgaa 2039
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>gb|AY105653.1| Zea mays PCO079171 mRNA sequence
          Length = 862

 Score =  204 bits (103), Expect = 2e-49
 Identities = 215/251 (85%), Gaps = 1/251 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gcagctgagtgccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctt 63
           |||||||||||||| || ||||||||||||| | || | |||||||||||||||||||||
Sbjct: 235 gcagctgagtgcctggcatcatacatcacag-acgacgaaattcgaaaaggaatcctctt 293

                                                                       
Query: 64  tccttcaatttcaagtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgc 123
            |||||  | || ||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 294 cccttcggtctccagtattaggcacatcaccgcacgtgtcggcgcagcagtcgtccgtgc 353

                                                                       
Query: 124 tgctgttgatgaagatttggccgagggatgctctgacatggatcctcgggacctcaggag 183
            ||||||| ||||||  |||| ||||| |||| |||  ||| |||| |||| ||  ||||
Sbjct: 354 cgctgttgctgaagacctggctgaggggtgctgtgatgtgggtcctagggagcttgggag 413

                                                                       
Query: 184 catgtcagagtcggatacggtggattacgtggctcggaagatgtggtaccctgtttacag 243
            ||||||||||||||  | ||||| ||||| ||||||||||||||||||||| |||||||
Sbjct: 414 tatgtcagagtcggaagcagtggactacgtcgctcggaagatgtggtaccctatttacag 473

                      
Query: 244 cccacttgtga 254
           ||| |||||||
Sbjct: 474 ccctcttgtga 484
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>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNBa0062C05 map S21174S, complete sequence
          Length = 178867

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                        
Query: 77   agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 136
            |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 2058 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 2117

                          
Query: 137  gatttggccgaggg 150
            ||| ||||||||||
Sbjct: 2118 gatctggccgaggg 2131



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                        
Query: 14   gccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctttccttcaatt 73
            ||||||| ||||||||||||| | |||| |||||||||||| ||||||||||| ||||| 
Sbjct: 1889 gccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctttccatcaatc 1947

                 
Query: 74   tcaag 78
            |||||
Sbjct: 1948 tcaag 1952



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                        
Query: 212  gtggctcggaagatgtggtaccctgtttacagcccacttgtgaa 255
            |||||||||||||||||||||||| |||||||||| || |||||
Sbjct: 2282 gtggctcggaagatgtggtaccctatttacagccccctcgtgaa 2325
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>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete
             sequence
          Length = 130058

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                         
Query: 77    agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 136
             |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 67916 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 67975

                           
Query: 137   gatttggccgaggg 150
             ||| ||||||||||
Sbjct: 67976 gatctggccgaggg 67989



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                         
Query: 14    gccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctttccttcaatt 73
             ||||||| ||||||||||||| | |||| |||||||||||| ||||||||||| ||||| 
Sbjct: 67747 gccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctttccatcaatc 67805

                  
Query: 74    tcaag 78
             |||||
Sbjct: 67806 tcaag 67810



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 212   gtggctcggaagatgtggtaccctgtttacagcccacttgtgaa 255
             |||||||||||||||||||||||| |||||||||| || |||||
Sbjct: 68140 gtggctcggaagatgtggtaccctatttacagccccctcgtgaa 68183
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 77       agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 136
                |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 18706638 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 18706697

                              
Query: 137      gatttggccgaggg 150
                ||| ||||||||||
Sbjct: 18706698 gatctggccgaggg 18706711



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                            
Query: 14       gccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctttccttcaatt 73
                ||||||| ||||||||||||| | |||| |||||||||||| ||||||||||| ||||| 
Sbjct: 18706469 gccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctttccatcaatc 18706527

                     
Query: 74       tcaag 78
                |||||
Sbjct: 18706528 tcaag 18706532



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 212      gtggctcggaagatgtggtaccctgtttacagcccacttgtgaa 255
                |||||||||||||||||||||||| |||||||||| || |||||
Sbjct: 18706862 gtggctcggaagatgtggtaccctatttacagccccctcgtgaa 18706905
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  115 bits (58), Expect = 1e-22
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 77       agtatcaggcacatcaccgcacgtgtcggcgctgcagtcgcccgtgctgctgttgatgaa 136
                |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct: 18717491 agtatcaggcacatcaccgcacgtgtcggcgccgcagtcgtccgtgccgctgttgatgaa 18717550

                              
Query: 137      gatttggccgaggg 150
                ||| ||||||||||
Sbjct: 18717551 gatctggccgaggg 18717564



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                            
Query: 14       gccttgcttcatacatcacagnatgatgcaattcgaaaaggaatcctctttccttcaatt 73
                ||||||| ||||||||||||| | |||| |||||||||||| ||||||||||| ||||| 
Sbjct: 18717322 gccttgcgtcatacatcacag-acgatgaaattcgaaaaggcatcctctttccatcaatc 18717380

                     
Query: 74       tcaag 78
                |||||
Sbjct: 18717381 tcaag 18717385



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 212      gtggctcggaagatgtggtaccctgtttacagcccacttgtgaa 255
                |||||||||||||||||||||||| |||||||||| || |||||
Sbjct: 18717715 gtggctcggaagatgtggtaccctatttacagccccctcgtgaa 18717758
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>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14,
              complete sequence
          Length = 121894

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 446    tcagttttgagacccgttgag 466
              |||||||||||||||||||||
Sbjct: 110809 tcagttttgagacccgttgag 110789
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>gb|AC136447.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0056F11, complete sequence
          Length = 89986

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 446   tcagttttgagacccgttgag 466
             |||||||||||||||||||||
Sbjct: 85876 tcagttttgagacccgttgag 85896
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>gb|BC029294.1| Homo sapiens ELL associated factor 1, mRNA (cDNA clone
           IMAGE:5169496)
          Length = 822

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 156 ctgacatggatcctcgggacctcag 180
           |||| ||||||||||||||||||||
Sbjct: 210 ctgagatggatcctcgggacctcag 186
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>emb|Z23002.1|MIST59KD S.tuberosum mitochondrial gene for the 59kDa subunit of the
            NAD+-dependent malic enzyme
          Length = 2188

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 1    gctgcagctgagtgccttgcttcatacat 29
            ||||| ||||||||||||||||| |||||
Sbjct: 1610 gctgctgctgagtgccttgcttcttacat 1638
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 446      tcagttttgagacccgttgag 466
                |||||||||||||||||||||
Sbjct: 10921289 tcagttttgagacccgttgag 10921269
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 98       cgtgtcggcgctgcagtcgcc 118
                |||||||||||||||||||||
Sbjct: 24626933 cgtgtcggcgctgcagtcgcc 24626953
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>gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G9 map 3p, complete sequence
          Length = 172400

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 156    ctgacatggatcctcgggacctcag 180
              |||| ||||||||||||||||||||
Sbjct: 124305 ctgagatggatcctcgggacctcag 124329
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>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence
          Length = 173842

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 156   ctgacatggatcctcgggacctcag 180
             |||| ||||||||||||||||||||
Sbjct: 65786 ctgagatggatcctcgggacctcag 65810
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>dbj|AP000364.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0026F07
          Length = 137354

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     cgtgtcggcgctgcagtcgcc 118
              |||||||||||||||||||||
Sbjct: 135193 cgtgtcggcgctgcagtcgcc 135213
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>dbj|AK068577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I04, full
            insert sequence
          Length = 2939

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 446  tcagttttgagacccgttgag 466
            |||||||||||||||||||||
Sbjct: 2320 tcagttttgagacccgttgag 2300
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 446      tcagttttgagacccgttgag 466
                |||||||||||||||||||||
Sbjct: 11000478 tcagttttgagacccgttgag 11000458
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>tpd|BR000069.1| TPA: TPA_exp: Ciona intestinalis Ci-ZF(C2H2)-66 mRNA for zinc
           finger protein, complete cds
          Length = 1706

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 tgttgatgaagatttggccga 147
           |||||||||||||||||||||
Sbjct: 605 tgttgatgaagatttggccga 625
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>ref|XM_454101.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E03377g predicted mRNA
          Length = 864

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 tgctgttgatgaagatttgg 143
           ||||||||||||||||||||
Sbjct: 60  tgctgttgatgaagatttgg 79
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    tgctgttgatgaagatttgg 143
              ||||||||||||||||||||
Sbjct: 316775 tgctgttgatgaagatttgg 316794
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>gb|AF353511.1|AF353511 Porcine epidemic diarrhea virus strain CV777, complete genome
          Length = 28033

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   cctcatttgtttacgttgac 427
             ||||||||||||||||||||
Sbjct: 20643 cctcatttgtttacgttgac 20624
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>gb|BC113247.1| Bos taurus cDNA clone IMAGE:8083724
          Length = 2046

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tacatttgttctgattagtg 324
            ||||||||||||||||||||
Sbjct: 1475 tacatttgttctgattagtg 1494
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>gb|AC111139.19| Mus musculus chromosome 3, clone RP23-365L12, complete sequence
          Length = 188633

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    ttgaataaatgtctgatgtt 513
              ||||||||||||||||||||
Sbjct: 154319 ttgaataaatgtctgatgtt 154338
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>gb|AC149333.2| Phakopsora pachyrhizi clone JGIAFNA-25D11, complete sequence
          Length = 37057

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   gtgctgctgttgatgaagat 139
             ||||||||||||||||||||
Sbjct: 13582 gtgctgctgttgatgaagat 13563


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,893,519
Number of Sequences: 3902068
Number of extensions: 3893519
Number of successful extensions: 71356
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71203
Number of HSP's gapped (non-prelim): 145
length of query: 526
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 503
effective length of database: 17,143,297,704
effective search space: 8623078745112
effective search space used: 8623078745112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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