ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30k01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 521 bits (263), Expect = e-145 Identities = 283/288 (98%), Gaps = 3/288 (1%) Strand = Plus / Plus Query: 1 cttccccgnngtgctccagnaagtgggtgggcgtcgagttcaaggagcccgtctggttca 60 |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 372 cttccccgaggtgctccag-aagtgggtgggcgtcgagttcaaggagcccgtctggttca 430 Query: 61 aggccggctctcagatcttctctgagggtggtctcgattaccttgggaaccccaaccttg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 aggccggctctcagatcttctctgagggtggtctcgattaccttgggaaccccaaccttg 490 Query: 121 tccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatgggtcttgttg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 tccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatgggtcttgttg 550 Query: 181 aagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctctaccccggcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 aagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctctaccccggcg 610 Query: 241 gccagtacttcgacccgctcggccttgccgacgacnccctgttacctt 288 |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 611 gccagtacttcgacccgctcggccttgccgacga--ccctgttacctt 656
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 389 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 448 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 449 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 508 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 509 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 568 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 628 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 629 ggcctcgccgacgac 643
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 413 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 472 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 473 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 532 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 533 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 592 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 652 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 653 ggcctcgccgacgac 667
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 413 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 472 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 473 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 532 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 533 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 592 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 652 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 653 ggcctcgccgacgac 667
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 415 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 474 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 475 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 534 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 535 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 594 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 654 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 655 ggcctcgccgacgac 669
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 420 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 479 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 480 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 539 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 540 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 599 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 659 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 660 ggcctcgccgacgac 674
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 453 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 512 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 513 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 572 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 573 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 632 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 692 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 693 ggcctcgccgacgac 707
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 22434426 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 22434485 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 22434486 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 22434545 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 22434546 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 22434605 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 22434606 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 22434665 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 22434666 ggcctcgccgacgac 22434680
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 95493 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 95552 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 95553 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 95612 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 95613 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 95672 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 95673 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 95732 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 95733 ggcctcgccgacgac 95747
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 389 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 448 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 449 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 508 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 509 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 568 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 628 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 629 ggcctcgccgacgac 643
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 413 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 472 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 473 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 532 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 533 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 592 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 652 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 653 ggcctcgccgacgac 667
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 413 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 472 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 473 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 532 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 533 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 592 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 652 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 653 ggcctcgccgacgac 667
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 414 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 473 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 474 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 533 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 534 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 593 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 653 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 654 ggcctcgccgacgac 668
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 420 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 479 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 480 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 539 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 540 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 599 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 659 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 660 ggcctcgccgacgac 674
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 244 bits (123), Expect = 1e-61 Identities = 222/255 (87%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||||| |||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 418 aagtgggtgcgcgtcgacttcaaggagcccgtgtggttcaaggccggcgcccagatcttc 477 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 478 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 537 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||||||| | |||||||| || || || || | |||||||||||| Sbjct: 538 gccgtgctgggattccaggtcgtcctcatgggcctcgtcgagggctaccgcatcaacggc 597 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccgctc 260 ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 ctccccggcgtcggcgacggcaacgacctctaccccggcggccagtacttcgacccgctc 657 Query: 261 ggccttgccgacgac 275 ||||| ||||||||| Sbjct: 658 ggcctcgccgacgac 672
>dbj|AP006706.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590a, complete sequence Length = 16141 Score = 143 bits (72), Expect = 4e-31 Identities = 144/168 (85%) Strand = Plus / Minus Query: 108 aaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctc 167 ||||||||||| |||||||| || |||||||| || ||||| |||||||| || |||||| Sbjct: 11527 aaccccaacctcgtccacgcacaaagcatcctcgcagtgctaggcttccaagttcttctc 11468 Query: 168 atgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgac 227 ||||||||||| ||||| |||||||||||||| || || ||||| || |||||| || Sbjct: 11467 atgggtcttgtcgaaggcttccgcatcaacggccttcccggagtcggagaaggcaacaac 11408 Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 |||||||| || ||||||||||| ||||| |||||||| ||||||||| Sbjct: 11407 ctctaccctggtggccagtactttgaccctctcggcctcgccgacgac 11360
>gb|AF022738.1|AF022738 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1105 Score = 129 bits (65), Expect = 5e-27 Identities = 196/237 (82%), Gaps = 2/237 (0%) Strand = Plus / Plus Query: 21 aagtgggtgggcgtcgagttcaaggagcccgtctggttcaaggccggctctcagatcttc 80 ||||||||| ||||| | |||||||| ||||| ||||||||||||||| | || |||||| Sbjct: 394 aagtgggtgcgcgtccacttcaagga-cccgtgtggttcaaggccggcgcccaaatcttc 452 Query: 81 tctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcctt 140 || || || || ||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 453 tccgacggcggcctcgactacctcggcaaccccaacctggtgcacgcccagagcatcctc 512 Query: 141 gccgtgcttggcttccaggtccttctcatgggtcttgttgaagggttccgcatcaacggt 200 |||||||| || ||||| || || ||||||||||| || |||| | |||||||||||| Sbjct: 513 gccgtgctgggattccaagt-ctcctcatgggtctcgtccaaggctaccgcatcaacggc 571 Query: 201 ctcgatggtgtcggcgagggcaacgacctctaccccggcggccagtacttcgacccg 257 ||| || ||| | ||| ||||||| |||| ||||||||| |||| |||||||||| Sbjct: 572 ctccccggcgtctgggagagcaacgagctctgccccggcgggcagtgcttcgacccg 628
>ref|NM_124807.2| Arabidopsis thaliana LHCB3 (LIGHT-HARVESTING CHLOROPHYLL BINDING PROTEIN 3) AT5G54270 (LHCB3) mRNA, complete cds Length = 1078 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 477 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 536 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 537 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 596 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 597 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 656 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 657 taccccggtgggcaatactttgacccg 683
>ref|NM_124808.3| Arabidopsis thaliana ATM2 (ARABIDOPSIS THALIANA MYOSIN 4) AT5G54280 (ATM2) mRNA, complete cds Length = 4559 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Minus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 3949 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 3890 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 3889 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 3830 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 3829 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 3770 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 3769 taccccggtgggcaatactttgacccg 3743
>gb|AF361858.1| Arabidopsis thaliana AT5g54270/MDK4_9 mRNA, complete cds Length = 952 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 449 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 508 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 509 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 568 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 569 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 628 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 629 taccccggtgggcaatactttgacccg 655
>gb|AY057735.1| Arabidopsis thaliana AT5g54270/MDK4_9 mRNA, complete cds Length = 798 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 382 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 441 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 442 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 501 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 502 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 561 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 562 taccccggtgggcaatactttgacccg 588
>gb|AF372917.1|AF372917 Arabidopsis thaliana AT5g54270/MDK4_9 mRNA, complete cds Length = 936 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 455 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 514 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 515 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 574 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 575 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 634 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 635 taccccggtgggcaatactttgacccg 661
>emb|BX831139.1|CNS09ZGL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZD02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 920 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 431 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 490 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 491 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 550 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 551 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 610 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 611 taccccggtgggcaatactttgacccg 637
>gb|AF134126.1| Arabidopsis thaliana chromosome V Lhcb3 protein (Lhcb3) mRNA, complete cds Length = 939 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 445 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 504 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 505 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 564 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 565 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 624 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 625 taccccggtgggcaatactttgacccg 651
>dbj|AB010695.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDK4 Length = 78596 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 41729 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 41788 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 41789 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 41848 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 41849 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 41908 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 41909 taccccggtgggcaatactttgacccg 41935
>gb|AF143691.1|AF143691 Arabidopsis thaliana type III chlorophyll a/b binding protein (LHCB3*1) mRNA, complete cds Length = 942 Score = 125 bits (63), Expect = 8e-26 Identities = 171/207 (82%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 406 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 465 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | |||||| Sbjct: 466 ccaaacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatg 525 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctc 230 ||| | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 526 ggtttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttg 585 Query: 231 taccccggcggccagtacttcgacccg 257 |||||||| || || ||||| |||||| Sbjct: 586 taccccggtgggcaatactttgacccg 612
>gb|AF139465.2|AF139465 Vigna radiata LHCII type III chlorophyll a/b binding protein (CipLhcb3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1047 Score = 115 bits (58), Expect = 8e-23 Identities = 187/230 (81%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 ||||||||||| || |||||||| || || | ||||| ||||| || ||||| || || Sbjct: 443 ttcaaggagccagtgtggttcaaagctggggcccagatattctcagaaggtgggcttgac 502 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 || | || ||||| ||||||||||| || || |||||| | || ||||| |||||||| Sbjct: 503 tatttgggcaacccaaaccttgtccatgcccaaagcatcttggcagtgctgggcttccaa 562 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgag 218 || |||| ||||| ||||||||||||||||||||||| || |||||||| || || ||| Sbjct: 563 gttgttctgatgggccttgttgaagggttccgcatcaatgggctcgatggagtaggagag 622 Query: 219 ggcaacgacctctaccccggcggccagtacttcgacccgctcggccttgc 268 |||||| |||| || || || ||||||||||| ||||| || |||||||| Sbjct: 623 ggcaacaacctatatccaggaggccagtactttgacccactgggccttgc 672
>emb|BX830083.1|CNS0A1XR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 957 Score = 109 bits (55), Expect = 5e-21 Identities = 151/183 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||| ||||| || || |||||||| || || ||| | || ||| | || ||||| Sbjct: 437 tggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaaccca 496 Query: 114 aaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatgggt 173 ||||| ||||| || |||||||| | ||||| ||||||||||| ||| | ||||||||| Sbjct: 497 aacctagtccatgctcagagcattttagccgtccttggcttccaagtcatcctcatgggt 556 Query: 174 cttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctctac 233 | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| | ||| Sbjct: 557 ttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgacttgtac 616 Query: 234 ccc 236 ||| Sbjct: 617 ccc 619
>gb|AC126013.12| Medicago truncatula clone mth2-32e10, complete sequence Length = 116778 Score = 105 bits (53), Expect = 8e-20 Identities = 179/221 (80%) Strand = Plus / Minus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||| || || || || |||||||| || |||||||| || || | |||||||| Sbjct: 92453 tggttcaaagcaggatcacaaatcttctcggaaggtggtcttgactatttagggaaccca 92394 Query: 114 aaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatgggt 173 |||||||| || || || |||||| | || || || || ||||| || |||| |||||| Sbjct: 92393 aaccttgttcatgcacaaagcatcttagcagtactaggtttccaagttgttctaatgggt 92334 Query: 174 cttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctctac 233 ||||||||||| || |||||||||||||| ||||||||| ||||||||| |||||||| Sbjct: 92333 cttgttgaaggctttcgcatcaacggtcttcctggtgtcggagagggcaacaacctctac 92274 Query: 234 cccggcggccagtacttcgacccgctcggccttgccgacga 274 || || ||||| ||||| ||||| || || || |||||||| Sbjct: 92273 cctggtggccaatactttgaccctcttggtctagccgacga 92233
>gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete sequence Length = 139970 Score = 105 bits (53), Expect = 8e-20 Identities = 179/221 (80%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||| || || || || |||||||| || |||||||| || || | |||||||| Sbjct: 90069 tggttcaaagcaggatcacaaatcttctcggaaggtggtcttgactatttagggaaccca 90128 Query: 114 aaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatgggt 173 |||||||| || || || |||||| | || || || || ||||| || |||| |||||| Sbjct: 90129 aaccttgttcatgcacaaagcatcttagcagtactaggtttccaagttgttctaatgggt 90188 Query: 174 cttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgacctctac 233 ||||||||||| || |||||||||||||| ||||||||| ||||||||| |||||||| Sbjct: 90189 cttgttgaaggctttcgcatcaacggtcttcctggtgtcggagagggcaacaacctctac 90248 Query: 234 cccggcggccagtacttcgacccgctcggccttgccgacga 274 || || ||||| ||||| ||||| || || || |||||||| Sbjct: 90249 cctggtggccaatactttgaccctcttggtctagccgacga 90289
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 103 bits (52), Expect = 3e-19 Identities = 85/96 (88%) Strand = Plus / Plus Query: 44 ggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattacct 103 |||| |||||||||||||||| ||| | ||||||||||| ||||| || ||||| ||||| Sbjct: 1114 ggaggccgtctggttcaaggcgggcgcccagatcttctccgagggcggcctcgactacct 1173 Query: 104 tgggaaccccaaccttgtccacgcgcagagcatcct 139 || ||||||||||| |||||||||||||||||||| Sbjct: 1174 gggcaaccccaacctggtccacgcgcagagcatcct 1209
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 99.6 bits (50), Expect = 5e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 79382 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 79323 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 79322 aacctggtgcacgcgcagagcatcct 79297 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Minus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 79191 cttcgacccgctcggcctcgccgacgac 79164
>gb|DQ455591.1| Phaseolus vulgaris chloroplast chlorophyll a/b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 404 Score = 99.6 bits (50), Expect = 5e-18 Identities = 167/206 (81%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 |||||||||||||| |||||||| || || | ||||| ||||| || ||||| || || Sbjct: 199 ttcaaggagcccgtatggttcaaagctggggcccagatattctcagaaggtgggcttgac 258 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 || | |||||||| ||||||||||| || || |||||| | || ||||| |||||||| Sbjct: 259 tatttggggaacccaaaccttgtccatgcccaaagcatcttggcagtgctgggcttccaa 318 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgag 218 || |||| ||||| ||||||| ||||||||||||||| || || ||||| || || ||| Sbjct: 319 gtagttctgatgggccttgttgtagggttccgcatcaatgggcttgatggagtaggagag 378 Query: 219 ggcaacgacctctaccccggcggcca 244 |||||| |||| ||||| || ||||| Sbjct: 379 ggcaacaacctttaccctgggggcca 404
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 99.6 bits (50), Expect = 5e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 21808434 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 21808493 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 21808494 aacctggtgcacgcgcagagcatcct 21808519 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 21808625 cttcgacccgctcggcctcgccgacgac 21808652
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 99.6 bits (50), Expect = 5e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 21801463 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 21801522 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 21801523 aacctggtgcacgcgcagagcatcct 21801548 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 21801654 cttcgacccgctcggcctcgccgacgac 21801681
>gb|AF207690.1|AF207690 Daucus carota cultivar Kurodagosun chlorophyll a/b-binding protein (cab3) mRNA, complete cds Length = 1183 Score = 99.6 bits (50), Expect = 5e-18 Identities = 185/230 (80%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 ||||||||||| || |||||||||||||| ||||| |||||| | || |||||||| || Sbjct: 552 ttcaaggagccagtgtggttcaaggccggatctcaaatcttcaccgaaggtggtctagac 611 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 ||||| || ||||| |||||||| || || |||||||| ||||| ||||| || ||||| Sbjct: 612 tacctgggcaacccaaaccttgtacatgctcagagcattcttgcggtgctcggattccaa 671 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgag 218 || | || ||||| || || || | ||||||||||| || || || || || ||| Sbjct: 672 gttgtcctaatgggactcgtagagagtttccgcatcaatggccttccaggggttggagag 731 Query: 219 ggcaacgacctctaccccggcggccagtacttcgacccgctcggccttgc 268 ||||| ||||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 732 ggcaatgacctctacccaggaggccaatacttcgaccctcttggccttgc 781
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 99.6 bits (50), Expect = 5e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 433 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 492 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 493 aacctggtgcacgcgcagagcatcct 518 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 624 cttcgacccgctcggcctcgccgacgac 651
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 99.6 bits (50), Expect = 5e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 422 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 481 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 482 aacctggtgcacgcgcagagcatcct 507 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 613 cttcgacccgctcggcctcgccgacgac 640
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 99.6 bits (50), Expect = 5e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 414 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 473 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 474 aacctggtgcacgcgcagagcatcct 499 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 605 cttcgacccgctcggcctcgccgacgac 632
>gb|DQ226734.1| Boechera divaricarpa isolate SLW-A-E08 mRNA sequence Length = 399 Score = 97.6 bits (49), Expect = 2e-17 Identities = 145/177 (81%) Strand = Plus / Minus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| ||||| || || |||||||| || || ||| | || ||| | || ||| Sbjct: 181 gtctggttcaaagccggttcacaaatcttctccgaaggcggtttggactacttaggcaac 122 Query: 111 cccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctcatg 170 || ||||| ||||| || |||||||| | ||||| |||| |||||| ||| | |||||| Sbjct: 121 ccaaacctagtccatgctcagagcattttagccgtccttgccttccaagtcgtcctcatg 62 Query: 171 ggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgac 227 || | |||||||| ||||||||||||||||| |||||||| ||||| ||||||||| Sbjct: 61 ggcttggttgaaggtttccgcatcaacggtcttgatggtgttggcgaaggcaacgac 5
>emb|X61608.1|BNLHCB3A B.napus gene for LHCII Type III chlorophyll a/b-binding protein, partial Length = 2036 Score = 97.6 bits (49), Expect = 2e-17 Identities = 178/221 (80%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 ||||| ||||| ||||||||||| ||||| || || ||||||||||| || ||| | || Sbjct: 1799 ttcaaagagccggtctggttcaaagccggttcacaaatcttctctgaaggcggtttggac 1858 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 ||| | || || || ||||| |||||||| || ||||| | ||||| ||||||||||| Sbjct: 1859 tacttaggcaatccaaacctagtccacgcccaaagcattttagccgtccttggcttccaa 1918 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgag 218 || | || ||||| | |||||||| ||||||||||||||||| |||||||| || || Sbjct: 1919 gttatcctaatgggattagttgaaggtttccgcatcaacggtcttgatggtgttggtgaa 1978 Query: 219 ggcaacgacctctaccccggcggccagtacttcgacccgct 259 ||||| ||| | ||||| ||||| || ||||| |||||||| Sbjct: 1979 ggcaatgacttgtacccgggcgggcaatactttgacccgct 2019
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 97.6 bits (49), Expect = 2e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| || ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 439 tggttcaaggccgggtcccagatcttctcggagggagggctcgactacctggggaacccc 498 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 ||||| |||||||| || ||||||||||| Sbjct: 499 aacctggtccacgcccaaagcatccttgc 527
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 95.6 bits (48), Expect = 7e-17 Identities = 75/84 (89%) Strand = Plus / Plus Query: 56 gttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaaccccaa 115 ||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 10 gttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaaccccaa 69 Query: 116 ccttgtccacgcgcagagcatcct 139 ||| || ||||||||||||||||| Sbjct: 70 cctggtgcacgcgcagagcatcct 93 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||||||||| ||||||||| Sbjct: 199 cttcgacccgctcggcctcgccgacgac 226
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 93.7 bits (47), Expect = 3e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||||||||||||||||||||| ||||||||| ||||| || ||||| ||||| |||| Sbjct: 294 ccgtctggttcaaggccggctcccagatcttcagcgagggcgggctcgactacctcggga 353 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| || ||||||||||||||||| Sbjct: 354 accccagcctggtgcacgcgcagagcatcct 384
>gb|DQ418483.1| Zingiber officinale chloroplast chlorophyll a/b-binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 393 Score = 91.7 bits (46), Expect = 1e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| || ||||||||||| ||||| || ||||||||||| || |||||| Sbjct: 120 tggttcaaggccgggtcgcagatcttctccgagggcggactcgattacctcggcaacccc 179 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 180 agcctgatccacgcgcagagcatcct 205
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 85.7 bits (43), Expect = 7e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||||||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 449 ccgtgtggttcaaggccggctcccagatcttcagcgagggcggcctcgactacctcggca 508 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| |||||||||||||||||||| Sbjct: 509 accccagcctggtccacgcgcagagcatcct 539 Score = 42.1 bits (21), Expect = 0.95 Identities = 43/48 (89%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || ||||||||| || ||||||||||||||| Sbjct: 628 ctctaccccggcggc-ag--cttcgaccccctgggccttgccgacgac 672
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 85.7 bits (43), Expect = 7e-14 Identities = 79/91 (86%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||||||||||| ||| ||||||||||| ||| |||||||| ||||| |||||||| | Sbjct: 381 ccgtctggttcatggctggctctcagattttcagcgagggtggcctcgactaccttggca 440 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| |||||||| ||||||||||| Sbjct: 441 accccagcctcgtccacgcccagagcatcct 471
>emb|X61610.1|BNLHCB3C B.napus gene for LHCII Type III chlorophyll a/b binding protein Length = 880 Score = 83.8 bits (42), Expect = 3e-13 Identities = 183/230 (79%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 ||||| ||||| ||||||||||| ||||| || || |||||||| || || ||| | || Sbjct: 309 ttcaaagagccggtctggttcaaagccggttcacaaatcttctcggaaggcggtttggac 368 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 ||| | || ||||| ||||| || ||||| |||||||| | || || ||||||||||| Sbjct: 369 tacttaggaaacccaaacctagtacacgctcagagcattttagcggtacttggcttccaa 428 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgag 218 || | || ||||| | |||||||| |||||||||||||||| |||||||| ||||| Sbjct: 429 gttatcctaatgggattagttgaaggcctccgcatcaacggtcttgatggtgttggcgaa 488 Query: 219 ggcaacgacctctaccccggcggccagtacttcgacccgctcggccttgc 268 ||||| ||| | ||||| || || || ||||| |||||||| || ||||| Sbjct: 489 ggcaatgacttgtacccgggtgggcaatactttgacccgctgggacttgc 538
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 83.8 bits (42), Expect = 3e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || || || ||||| ||||||||| Sbjct: 418 tggttcaaggccggcgcgcagatcttctcggagggcgggctggactacctggggaacccc 477 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||| ||||||||||| Sbjct: 478 aacctggtgcacgcacagagcatcct 503
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 83.8 bits (42), Expect = 3e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || || || ||||| ||||||||| Sbjct: 66 tggttcaaggccggcgcgcagatcttctcggagggcgggctggactacctggggaacccc 125 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||| ||||||||||| Sbjct: 126 aacctggtgcacgcacagagcatcct 151 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||| ||||| ||||||||| Sbjct: 257 cttcgacccgctgggcctcgccgacgac 284
>emb|X58230.1|NTCAB36 Tobacco CAB36 gene for chlorophyll a/b binding protein Length = 1986 Score = 79.8 bits (40), Expect = 4e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| |||||||| ||||| || || ||||| || |||||||| ||||| Sbjct: 1122 tggttcaaggccggatctcagatattctcagaaggcggtcttgactaccttggtaaccca 1181 Query: 114 aaccttgtccacgcgcagagcatccttgccgt 145 |||||| |||| || |||||||| |||||||| Sbjct: 1182 aaccttatccatgcacagagcattcttgccgt 1213
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 77.8 bits (39), Expect = 2e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||||||||| ||||||||| ||||| || || || ||||| |||| Sbjct: 447 ccgtgtggttcaaggccggctcccagatcttcagcgagggcgggctggactacctcggga 506 Query: 109 accccaaccttgtccacgcgcagagcatccttgcc 143 |||| | ||| ||||||||||||||||||||||| Sbjct: 507 acccgagcctcatccacgcgcagagcatccttgcc 541 Score = 42.1 bits (21), Expect = 0.95 Identities = 43/48 (89%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||| ||||| ||||||||| Sbjct: 626 ctctaccccggcggc-ag--cttcgacccgctgggcctcgccgacgac 670
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||||||||||||||||||||| ||||||||| ||||| || || || ||||| || | Sbjct: 1265 ccgtctggttcaaggccggctcccagatcttcagcgagggcgggctggactacctcggca 1324 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 1325 accccagcctgatccacgcgcagagcatcct 1355
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||||||||| |||||||| ||||||||||||||| ||||| || | Sbjct: 395 ccgtttggttcaaggccggctcccagatctttagtgagggtggtctcgactacctcggca 454 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| || ||||| || |||||||| Sbjct: 455 accccagcctagtgcacgcacaaagcatcct 485
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 75.8 bits (38), Expect = 7e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || || || ||||| || ||||| Sbjct: 168 tggttcaaggccggcgcgcagatcttctcggagggcgggctggactacctgggcaacccg 227 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||| || ||||||||||||||||| Sbjct: 228 aacctggtgcacgcgcagagcatcct 253
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 75.8 bits (38), Expect = 7e-11 Identities = 74/86 (86%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| ||||||||||||||| || ||||| ||||| |||||||| |||||| Sbjct: 591 tggttcaaggctggctctcagatcttcagcgatggtggcctcgactaccttggcaacccc 650 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| |||||||| |||||| |||| Sbjct: 651 agcctcgtccacgcccagagcctcct 676
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 73.8 bits (37), Expect = 3e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 55 ggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccca 114 |||||||||||||||| ||||||||| |||||||| || || ||||| |||||||| | Sbjct: 1401 ggttcaaggccggctcccagatcttcagcgagggtggactggactacctcgggaacccga 1460 Query: 115 accttgtccacgcgcagagcatcct 139 ||| ||||||||||||||||||| Sbjct: 1461 gcctcatccacgcgcagagcatcct 1485 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||| ||||| ||||||||| Sbjct: 1591 cttcgacccgctgggcctcgccgacgac 1618
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 73.8 bits (37), Expect = 3e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||||| || |||||| |||||||| ||||| ||||| || ||| Sbjct: 406 gtctggttcaaggccggctcgcaaatcttcagcgagggtggcctcgactacctcggcaac 465 Query: 111 cccaaccttgtccacgcgcagagcatccttgcc 143 || | ||| ||||| || ||||||||||||||| Sbjct: 466 ccaagcctcgtccatgctcagagcatccttgcc 498
>gb|M17558.1|TOMCAB4A Tomato Cab-4 gene encoding chlorophyll a/b-binding protein, complete cds Length = 895 Score = 73.8 bits (37), Expect = 3e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct: 446 tggttcaaggctggatctcagattttctccgaaggtgggcttgactaccttggaaaccca 505 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 ||||||||||| || |||||||| ||||| Sbjct: 506 aaccttgtccatgctcagagcattcttgc 534
>gb|AF039598.1| Prunus persica light harvesting chlorophyll A/B binding protein (Lhcb-Pp2) mRNA, complete cds Length = 955 Score = 71.9 bits (36), Expect = 1e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||| |||||||| |||||||| || || || ||||| ||||| Sbjct: 388 tggttcaaggctggatctcaaatcttctccgagggtggccttgactatcttggcaaccca 447 Query: 114 aaccttgtccacgcgcagagcatc 137 ||||||||||| || ||||||||| Sbjct: 448 aaccttgtccatgcccagagcatc 471
>emb|X61915.1|PTCABP P.thunbergii cab gene Length = 5419 Score = 69.9 bits (35), Expect = 4e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| | ||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 2659 tggttcaaggccggggcgcagatattctcagagggaggccttgactacctggggaacccc 2718 Query: 114 aaccttgtccacgcgcagagcat 136 ||||| |||||||||||||||| Sbjct: 2719 aacctgatccacgcgcagagcat 2741
>gb|M37489.1|PINCABII2 Pinus sylvestris chlorophyll a/b-binding protein (Cab) mRNA, partial cds Length = 583 Score = 69.9 bits (35), Expect = 4e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| | ||||| ||||| ||||| || || || ||||| ||||||||| Sbjct: 45 tggttcaaggccggggcgcagatattctcagagggaggccttgactacctggggaacccc 104 Query: 114 aaccttgtccacgcgcagagcat 136 ||||| |||||||||||||||| Sbjct: 105 aacctgatccacgcgcagagcat 127
>dbj|AB115772.1| Physcomitrella patens subsp. patens PpLhcb2 gene for light-harvesting chlorophyll a/b-binding protein 2, complete cds Length = 3125 Score = 67.9 bits (34), Expect = 2e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| |||| |||||| ||||||||||| |||||| | || |||||| Sbjct: 2614 tggttcaaggccggagctcaaatcttcagcgagggtggtcttgattacttgggcaacccc 2673 Query: 114 aaccttgtccacgcgcagagcatcct 139 | |||||| ||||| ||||||||||| Sbjct: 2674 agccttgtgcacgctcagagcatcct 2699
>emb|X04966.1|PHCAB37 Petunia Cab gene for chlorophyll a/b binding protein Length = 1470 Score = 67.9 bits (34), Expect = 2e-08 Identities = 76/90 (84%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||| || ||||| || |||||||| || |||||||| ||||| Sbjct: 736 tggttcaaggctggatctcaaattttctcagaaggtggtcttgactaccttggcaaccca 795 Query: 114 aaccttgtccacgcgcagagcatccttgcc 143 |||||| |||| || |||||||| |||||| Sbjct: 796 aaccttatccatgctcagagcattcttgcc 825
>gb|L07120.1|COTIIABINB Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, exons 1-3 Length = 1820 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 |||||||| || || ||||||||||| || |||| || ||||| || ||||| | ||| Sbjct: 1131 ttcaaggaaccagtatggttcaaggcaggagctcaaattttctcagaaggtggcttggat 1190 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 ||| | || ||||| ||||| ||||| || || |||||||||||||| || || ||||| Sbjct: 1191 tacttaggcaaccctaacctagtccatgctcaaagcatccttgccgttctcggattccaa 1250 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaa 196 ||||| || ||||| || || ||||| ||||||||||| Sbjct: 1251 gtcctcctaatgggactcgtcgaaggattccgcatcaa 1288
>ref|NM_126537.2| Arabidopsis thaliana LHCB2.2; chlorophyll binding AT2G05070 (LHCB2.2) mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 443 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 502 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 503 accctaacttgatccacgcgcaaagcatc 531
>ref|NM_001036246.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT2G05060 transcript variant AT2G05060.2 mRNA, complete cds Length = 2130 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 1697 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 1638 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 1637 accctaacttgatccacgcgcaaagcatc 1609
>gb|AY093372.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070) mRNA, complete cds Length = 881 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 383 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 442 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 443 accctaacttgatccacgcgcaaagcatc 471
>gb|AC007211.6| Arabidopsis thaliana chromosome 2 BAC F1O13 genomic sequence, complete sequence Length = 103889 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 81420 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 81361 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 81360 accctaacttgatccacgcgcaaagcatc 81332
>gb|AY066036.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 798 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 383 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 442 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 443 accctaacttgatccacgcgcaaagcatc 471
>gb|AY062563.1| Arabidopsis thaliana putative chlorophyll a/b binding protein (At2g05070; F1O13.20) mRNA, complete cds Length = 958 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 443 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 502 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 503 accctaacttgatccacgcgcaaagcatc 531
>gb|AY054218.1| Arabidopsis thaliana At2g05070/F1O13.20 mRNA, complete cds Length = 929 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 441 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 500 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 501 accctaacttgatccacgcgcaaagcatc 529
>emb|BX819347.1|CNS0A9RX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 424 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 483 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 484 accctaacttgatccacgcgcaaagcatc 512
>emb|BX820206.1|CNS0A9D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 906 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 432 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 491 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 492 accctaacttgatccacgcgcaaagcatc 520
>emb|BX820202.1|CNS0A9FS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 426 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 485 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 486 accctaacttgatccacgcgcaaagcatc 514
>emb|BX819668.1|CNS0A9CZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 431 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 490 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 491 accctaacttgatccacgcgcaaagcatc 519
>emb|BX819509.1|CNS0A82Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 926 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 419 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 478 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 479 accctaacttgatccacgcgcaaagcatc 507
>gb|AF134123.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.2) mRNA, complete cds Length = 943 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 433 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 492 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 493 accctaacttgatccacgcgcaaagcatc 521
>gb|AF134122.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.1) mRNA, complete cds Length = 974 Score = 65.9 bits (33), Expect = 7e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 441 ccgtgtggttcaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 500 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 501 accctaacttgatccacgcgcaaagcatc 529
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 63.9 bits (32), Expect = 3e-07 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| |||||||||||||| | ||||| ||| | ||||| || ||||| ||||| |||| Sbjct: 460 ccgtgtggttcaaggccggg-cgcagatattcgcggagggaggcctcgactacctgggga 518 Query: 109 accccaaccttgtccacgcgcagagcat 136 |||||||||| |||||||||||||||| Sbjct: 519 accccaacctgatccacgcgcagagcat 546
>emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chlorophyll a/b binding protein of photosystem II Length = 772 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||| |||||||| | ||||| ||||| ||||| || ||||| ||||| || | Sbjct: 292 ccgtgtggtttaaggccggggcgcagatattctcggagggaggcctcgactacctgggaa 351 Query: 109 accccaaccttgtccacgcgcagagcat 136 |||||||||| |||||||||||||||| Sbjct: 352 accccaacctgatccacgcgcagagcat 379
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 63.9 bits (32), Expect = 3e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||||||| | ||||||||||| ||||| || ||||| ||||| ||||||||| Sbjct: 429 tggttcaaggccggcgcgcagatcttctccgagggggggctcgactacctggggaacccc 488
>gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 873 Score = 63.9 bits (32), Expect = 3e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| |||||||||||||| ||||||| ||||| ||||| || ||||| ||||| |||| Sbjct: 326 ccgtgtggttcaaggccggggctcagatattctcagagggaggcctcgactacctgggga 385 Query: 109 accccaaccttgtccacgcgcagagcat 136 ||||||| || | ||||| |||||||| Sbjct: 386 accccaatctgattcacgcacagagcat 413
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 383 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 442 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 443 accccagcctgatccacgcgcagagcatcct 473 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 562 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 606
>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 (LHCP) mRNA, partial cds Length = 712 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| |||||||||||| ||||| || || || ||||| || ||||| Sbjct: 349 tggttcaaggccggatctcagatcttcagcgagggcgggctggactacctgggaaaccct 408 Query: 114 aaccttgtccacgcgcagagcat 136 | |||||||||||| |||||||| Sbjct: 409 agccttgtccacgcacagagcat 431
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 832 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 891 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 892 acccgagcctgatccacgcgcagagcatcct 922 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 1028 cttcgacccgctcggcctcgccga 1051
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||||||||| || || || ||||| || ||| Sbjct: 388 gtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggcaac 447 Query: 111 ccc 113 ||| Sbjct: 448 ccc 450
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||||||||| || || || ||||| || ||| Sbjct: 375 gtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggcaac 434 Query: 111 ccc 113 ||| Sbjct: 435 ccc 437
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||||||||| || || || ||||| || ||| Sbjct: 379 gtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggcaac 438 Query: 111 ccc 113 ||| Sbjct: 439 ccc 441
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 14291 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 14232 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 14231 accccagcctgatccacgcgcagagcatcct 14201 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Minus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 14112 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 14068
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 10793367 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 10793426 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 10793427 acccgagcctgatccacgcgcagagcatcct 10793457 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 10793563 cttcgacccgctcggcctcgccga 10793586
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 30024720 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 30024779 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 30024780 accccagcctgatccacgcgcagagcatcct 30024810 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct: 23603919 tggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccg 23603978 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 23603979 agcctgatccacgcgcagagcatcct 23604004 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 30024899 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 30024943 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 23604093 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 23604137
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 20710 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 20769 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 20770 accccagcctgatccacgcgcagagcatcct 20800 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 20889 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 20933
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 17090 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 17149 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 17150 acccgagcctgatccacgcgcagagcatcct 17180 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 17286 cttcgacccgctcggcctcgccga 17309
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 129985 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 130044 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 130045 acccgagcctgatccacgcgcagagcatcct 130075 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 130181 cttcgacccgctcggcctcgccga 130204
>emb|X61609.1|BNLHCB3B B.napus gene for LHC II Type III chlorophyll a/b binding protein Length = 2390 Score = 61.9 bits (31), Expect = 1e-06 Identities = 160/203 (78%) Strand = Plus / Plus Query: 39 ttcaaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgat 98 ||||| ||||| ||||||||||| ||||| || || |||||||| || || ||| | || Sbjct: 1830 ttcaaagagccggtctggttcaaagccggttcacaaatcttctcggaaggcggtttggac 1889 Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccag 158 ||| | || ||||| ||||| || ||||| |||||||| | || || ||||||||||| Sbjct: 1890 tacttaggaaacccaaacctagtacacgctcagagcattttagcggtacttggcttccaa 1949 Query: 159 gtccttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgag 218 || | || ||||| | |||||||| |||||||||||| | | |||||||| ||||| Sbjct: 1950 gttatcctaatgggattagttgaaggtttccgcatcaacaggtttgatggtgttggcgaa 2009 Query: 219 ggcaacgacctctaccccggcgg 241 ||||| ||| | ||||| ||||| Sbjct: 2010 ggcaatgacttgtacccgggcgg 2032
>emb|X13407.1|PTCAB Pinus thunbergii cab mRNA for light-harvesting chlorophyll a/b binding protein Length = 978 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| | ||||| ||||| ||||| || || || ||| |||||||||| Sbjct: 440 tggttcaaggccggggcgcagatattctcagagggaggccttgactacgctgggaacccc 499 Query: 114 aaccttgtccacgcgcagagcat 136 ||||| |||||||||||||||| Sbjct: 500 aacctgatccacgcgcagagcat 522
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| |||||||||||||| || ||||||||| |||||||| || || ||||| || | Sbjct: 395 ccgtgtggttcaaggccgggtcgcagatcttcagcgagggtgggctggactacctcggca 454 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 455 acccgagcctgatccacgcgcagagcatcct 485 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 ttcgacccgctcggccttgccgacgac 275 ||||||||||||||||| ||||||||| Sbjct: 592 ttcgacccgctcggcctcgccgacgac 618
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 435 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 494 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 495 acccgagcctgatccacgcgcagagcatcct 525 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 631 cttcgacccgctcggcctcgccga 654
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 440 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 499 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 500 acccgagcctgatccacgcgcagagcatcct 530 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 636 cttcgacccgctcggcctcgccga 659
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 442 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 501 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 502 acccgagcctgatccacgcgcagagcatcct 532 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 638 cttcgacccgctcggcctcgccga 661
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 464 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 523 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 524 accccagcctgatccacgcgcagagcatcct 554 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 643 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 687
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 464 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 523 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 524 accccagcctgatccacgcgcagagcatcct 554 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 643 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 687
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 466 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 525 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 526 accccagcctgatccacgcgcagagcatcct 556 Score = 42.1 bits (21), Expect = 0.95 Identities = 43/48 (89%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 |||||||||||||| ||| ||||||| |||||||||| ||||||||| Sbjct: 645 ctctaccccggcgg-cag--cttcgactcgctcggcctcgccgacgac 689
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 440 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 499 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 500 acccgagcctgatccacgcgcagagcatcct 530 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 636 cttcgacccgctcggcctcgccga 659
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 440 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 499 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 500 acccgagcctgatccacgcgcagagcatcct 530 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 636 cttcgacccgctcggcctcgccga 659
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 466 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 525 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 526 accccagcctgatccacgcgcagagcatcct 556 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 645 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 689
>gb|M16887.1|SIPCAB White campion chlorophyll a/b-binding protein precursor (CAB) mRNA, partial cds Length = 642 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || |||||||| ||| ||||||||||| || |||||||| ||||| Sbjct: 412 tggttcaaggcagggtctcagatattccaagagggtggtcttgactaccttggcaaccca 471 Query: 114 aaccttgtccacgcgcagagcat 136 ||||| ||||| || |||||||| Sbjct: 472 aacctggtccatgctcagagcat 494
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || ||||| ||||| || | Sbjct: 425 ccgtgtggttcaaggcggggtcccagatcttcagcgagggggggctcgactacctcggca 484 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| ||||||||||||||||||| Sbjct: 485 accccagcctgatccacgcgcagagcatcct 515 Score = 42.1 bits (21), Expect = 0.95 Identities = 43/48 (89%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| ||| || |||||||||||||| ||||||||| Sbjct: 604 ctctaccccggcggc-agt--ttagacccgctcggcctcgccgacgac 648
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||||||||| || || || ||||| || ||| Sbjct: 1163 gtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggcaac 1222 Query: 111 ccc 113 ||| Sbjct: 1223 ccc 1225
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||||||||| || || || ||||| || ||| Sbjct: 407 gtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggcaac 466 Query: 111 ccc 113 ||| Sbjct: 467 ccc 469
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 61.9 bits (31), Expect = 1e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||||||||| || || || ||||| || ||| Sbjct: 1035 gtctggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggcaac 1094 Query: 111 ccc 113 ||| Sbjct: 1095 ccc 1097
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 61.9 bits (31), Expect = 1e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| ||||| ||||||||| ||||| || ||||| ||||| || | Sbjct: 421 ccgtgtggttcaaggcgggctcgcagatcttcagcgagggcgggctcgactacctcggca 480 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||||||||||||||| Sbjct: 481 acccgagcctgatccacgcgcagagcatcct 511 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 617 cttcgacccgctcggcctcgccga 640
>gb|DQ226800.1| Boechera divaricarpa isolate SLW-B-D01 mRNA sequence Length = 510 Score = 60.0 bits (30), Expect = 4e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 56 gttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaaccccaa 115 ||||||||| || |||||||||||||| || || ||||| |||||||| || ||||| || Sbjct: 1 gttcaaggcaggttctcagatcttctcagaaggaggtcttgattacctcggaaaccctaa 60 Query: 116 ccttgtccacgcgcagagcatc 137 | | |||||||||| |||||| Sbjct: 61 cttgatccacgcgcaaagcatc 82
>dbj|AB236867.1| Panax ginseng cab mRNA for chlorophyll a/b binding protein, complete cds Length = 935 Score = 60.0 bits (30), Expect = 4e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| | || |||||||| || ||||| || || || ||||| ||||| Sbjct: 410 tggttcaaggccggagcccaaatcttctccgaaggtggccttgactatcttggcaaccca 469 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||||||||| || ||||||||||| Sbjct: 470 aaccttgtccatgcccagagcatcct 495
>emb|Z35160.1|STCHLABP S.tuberosum gene for chlorophyll a/b binding protein type I Length = 3529 Score = 60.0 bits (30), Expect = 4e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||| || ||||| || || ||||| || |||||||| ||||| Sbjct: 2499 tggttcaaggctggatctcaaattttctccgaaggcggtcttgactaccttggtaaccca 2558 Query: 114 aaccttgtccacgcgcagagcatccttgcc 143 |||||| |||| || |||||||| |||||| Sbjct: 2559 aaccttatccatgctcagagcattcttgcc 2588
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 60.0 bits (30), Expect = 4e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 |||||||||||||| || ||||||||| |||||||| || || ||| | || ||||| Sbjct: 413 tggttcaaggccgggtcccagatcttcagcgagggtgggctggactacttgggcaaccca 472 Query: 114 aaccttgtccacgcgcagagcatcct 139 | |||||||||||| ||||||||||| Sbjct: 473 agccttgtccacgcccagagcatcct 498
>gb|M17559.1|TOMCAB5A Tomato Cab-5 gene encoding chlorophyll a/b-binding protein, 3' end Length = 810 Score = 60.0 bits (30), Expect = 4e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||| || ||||| || || ||||| || |||||||| ||||| Sbjct: 306 tggttcaaggctggatctcaaattttctccgaaggcggtcttgactaccttggtaaccca 365 Query: 114 aaccttgtccacgcgcagagcatccttgcc 143 |||||| |||| || |||||||| |||||| Sbjct: 366 aaccttatccatgctcagagcatacttgcc 395
>ref|NM_126540.2| Arabidopsis thaliana LHCB2.1; chlorophyll binding AT2G05100 (LHCB2.1) mRNA, complete cds Length = 1068 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 444 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 503 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 504 accctaacttgatccacgcgcaaagcatc 532
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||||||||| | ||||||||| ||||| || | || ||||| || ||| Sbjct: 442 gtctggttcaaggccggagcccagatcttcagcgagggcggattggactacctgggcaac 501 Query: 111 cccaaccttgtccacgcgcagagcatcct 139 |||| ||| |||||||||||||||||||| Sbjct: 502 cccagcctcgtccacgcgcagagcatcct 530 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||| ||||| ||||||||| Sbjct: 638 cttcgacccgcttggcctcgccgacgac 665
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||||||||| | ||||||||| ||||| || | || ||||| || ||| Sbjct: 59 gtctggttcaaggccggagcccagatcttcagcgagggcggattggactacctgggcaac 118 Query: 111 cccaaccttgtccacgcgcagagcatcct 139 |||| ||| |||||||||||||||||||| Sbjct: 119 cccagcctcgtccacgcgcagagcatcct 147 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 |||||||||||| ||||| ||||||||| Sbjct: 253 cttcgacccgcttggcctcgccgacgac 280
>gb|AY045787.1| Arabidopsis thaliana At2g05100 mRNA sequence Length = 1047 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 529 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 588 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 589 accctaacttgatccacgcgcaaagcatc 617
>gb|DQ427744.1| Sorghum propinquum locus HHU11 genomic sequence Length = 757 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 613 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 653
>gb|DQ427743.1| Sorghum bicolor voucher PI585454 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 611 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 651
>gb|DQ427742.1| Sorghum bicolor voucher PI267539 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 611 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 651
>gb|DQ427741.1| Sorghum bicolor voucher PI267408 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427740.1| Sorghum bicolor voucher PI221607 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427739.1| Sorghum bicolor voucher PI152702 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427738.1| Sorghum bicolor voucher NSL92371 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427737.1| Sorghum bicolor voucher NSL87902b locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427736.1| Sorghum bicolor voucher NSL87902a locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427735.1| Sorghum bicolor voucher NSL87666 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427734.1| Sorghum bicolor voucher NSL77217 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427733.1| Sorghum bicolor voucher NSL77034 locus HHU11 genomic sequence Length = 755 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 611 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 651
>gb|DQ427732.1| Sorghum bicolor voucher NSL56174 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427731.1| Sorghum bicolor voucher NSL55243 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427730.1| Sorghum bicolor voucher NSL51365 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427729.1| Sorghum bicolor voucher NSL51030 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|DQ427728.1| Sorghum bicolor voucher NSL50875 locus HHU11 genomic sequence Length = 761 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 ||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 617 ctaccccggcggcaagttcttcgacccgctcggcctcgccg 657
>gb|AC007443.5| Arabidopsis thaliana chromosome 2 clone F15L11 map ve013, complete sequence Length = 13145 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 5418 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 5359 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 5358 accctaacttgatccacgcgcaaagcatc 5330
>gb|AY052348.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 1001 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 442 ccgtgtggttcaaggcaggttctcagattttctcggaaggaggtcttgattacctcggaa 501 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 502 accctaacttgatccacgcgcaaagcatc 530
>gb|AY052275.1| Arabidopsis thaliana At2g05100/F15L11.2 mRNA, complete cds Length = 943 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 437 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 496 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 497 accctaacttgatccacgcgcaaagcatc 525
>emb|BX819843.1|CNS0A9GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS37ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 980 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 422 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 481 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 482 accctaacttgatccacgcgcaaagcatc 510
>emb|BX819702.1|CNS0A9H1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZH11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 912 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 405 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 464 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 465 accctaacttgatccacgcgcaaagcatc 493
>emb|BX819270.1|CNS0A9RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 937 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||| ||||| ||||||||||| ||||| || || ||||| |||||||| || | Sbjct: 414 ccgtgtggtttaaggcaggctctcagattttctcagaaggaggtcttgattacctcggaa 473 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 474 accctaacttgatccacgcgcaaagcatc 502
>emb|BX821132.1|CNS0A9BI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 941 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 420 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 479 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 480 accctaacttgatccacgcgcaaagcatc 508
>emb|BX819861.1|CNS0A9DS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 964 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 434 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 493 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 494 accctaacttgatccacgcgcaaagcatc 522
>emb|BX819688.1|CNS0A9G4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 914 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 403 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 462 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 463 accctaacttgatccacgcgcaaagcatc 491
>emb|BX819687.1|CNS0A9G3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 917 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 405 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 464 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 465 accctaacttgatccacgcgcaaagcatc 493
>emb|BX819683.1|CNS0A80L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 405 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 464 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 465 accctaacttgatccacgcgcaaagcatc 493
>emb|BX842010.1|CNS09YA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 934 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 425 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 484 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 485 accctaacttgatccacgcgcaaagcatc 513
>gb|AF312227.1|AF312227 Citrus reticulata light-harvesting chlorophyll-binding protein mRNA, partial cds, nuclear gene for chloroplast product Length = 470 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| ||| |||| ||||||||||| ||||| || || || ||||| |||||| Sbjct: 178 tggttcaaggctggcgctcaaatcttctctgaaggtggccttgactatcttggcaacccc 237 Query: 114 aacct 118 ||||| Sbjct: 238 aacct 242
>gb|AF134124.1| Arabidopsis thaliana Lhcb2 protein (Lhcb2.3) mRNA, complete cds Length = 967 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 432 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 491 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 492 accctaacttgatccacgcgcaaagcatc 520
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||||||| | ||||||||||||||||| || || || ||||| || | Sbjct: 383 ccgtgtggttcaaggccggcgcccagatcttctctgagggcggcctggactacctgggca 442 Query: 109 acccc 113 ||||| Sbjct: 443 acccc 447
>gb|BT001933.1| Arabidopsis thaliana clone C105385 putative chlorophyll a/b binding protein (At2g05100) mRNA, complete cds Length = 829 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || |||||||| ||||| || || ||||| |||||||| || | Sbjct: 383 ccgtgtggttcaaggcaggttctcagattttctcagaaggaggtcttgattacctcggaa 442 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||| ||| | |||||||||| |||||| Sbjct: 443 accctaacttgatccacgcgcaaagcatc 471
>ref|XM_472726.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggcct 265 ||||||||||||| ||| |||||||||||||||||| Sbjct: 561 ctaccccggcggcaagttcttcgacccgctcggcct 596
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 230 ctaccccggcggccagtacttcgacccgctcggcct 265 ||||||||||||| ||| |||||||||||||||||| Sbjct: 19857 ctaccccggcggcaagttcttcgacccgctcggcct 19822
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 230 ctaccccggcggccagtacttcgacccgctcggcct 265 ||||||||||||| ||| |||||||||||||||||| Sbjct: 22811082 ctaccccggcggcaagttcttcgacccgctcggcct 22811047
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 56.0 bits (28), Expect = 6e-05 Identities = 73/88 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| |||||||||||||| | ||||| ||||| ||||| || ||||| ||||| |||| Sbjct: 175 ccgtgtggttcaaggccggggcgcagatattctcagagggaggcctcgactacctgggga 234 Query: 109 accccaaccttgtccacgcgcagagcat 136 |||| ||||| | ||||| |||||||| Sbjct: 235 accctaacctgattcacgcacagagcat 262
>dbj|AK108672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H08, full insert sequence Length = 1377 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 230 ctaccccggcggccagtacttcgacccgctcggcct 265 ||||||||||||| ||| |||||||||||||||||| Sbjct: 237 ctaccccggcggcaagttcttcgacccgctcggcct 202
>dbj|AK104811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G02, full insert sequence Length = 1138 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggcct 265 ||||||||||||| ||| |||||||||||||||||| Sbjct: 623 ctaccccggcggcaagttcttcgacccgctcggcct 658
>dbj|AK066070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055K10, full insert sequence Length = 1144 Score = 56.0 bits (28), Expect = 6e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggcct 265 ||||||||||||| ||| |||||||||||||||||| Sbjct: 624 ctaccccggcggcaagttcttcgacccgctcggcct 659
>emb|X61361.1|EGLHCAB E.gracilis gene for light harvesting chlorophyll a/b binding protein of photosystem II Length = 7650 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctgagg 87 ||||||||||||||||||||||| | ||||||||||| |||| Sbjct: 5906 gagcccgtctggttcaaggccggtgcgcagatcttctccgagg 5948 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctc 82 ||||||||| |||||||||| | ||||||||||| Sbjct: 4614 ccgtctggtacaaggccggcgcgcagatcttctc 4647
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 |||||||||||||||||| | ||||||||||| ||||| || || || ||||| || ||| Sbjct: 373 gtctggttcaaggccggcgcccagatcttctccgagggcggcctggactacctgggcaac 432 Query: 111 ccc 113 ||| Sbjct: 433 ccc 435
>dbj|AB206466.1| Adiantum capillus-veneris AcCab1 gene for chlorophyll a/b-binding protein, complete cds Length = 1500 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| ||||| ||||||||| | || || || || ||||| ||||| ||||| Sbjct: 909 tggttcaaggctggctcccagatcttcgccgatggcggccttgattatcttggcaacccg 968 Query: 114 aaccttgtccacgcgcagagcat 136 | |||||||||||| || ||||| Sbjct: 969 agccttgtccacgctcaaagcat 991
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 ||||||||||||| ||||| || ||||||||| |||||||| ||||| ||| | || | Sbjct: 435 ccgtctggttcaaagccggttcccagatcttcagcgagggtgggctcgactacttgggca 494 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||| ||||||||||| Sbjct: 495 acccaagcctcatccacgctcagagcatcct 525
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctgagggtgg 91 |||||||| |||||||||||||| | ||||||||||| |||||||| Sbjct: 384 gagcccgtgtggttcaaggccggtgcccagatcttctccgagggtgg 430
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| |||||||||||||| || ||||||||| |||||||| ||||| ||| | || | Sbjct: 627 ccgtgtggttcaaggccgggtcccagatcttcagcgagggtgggctcgactacttgggca 686 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||| | ||| ||||||| ||||||||||| Sbjct: 687 acccaagcctgatccacgcccagagcatcct 717
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 54.0 bits (27), Expect = 3e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||| ||||| || || || ||||| || | Sbjct: 780 ccgtgtggttcaaggcgggttcgcagatcttcagcgagggggggctggactacctgggca 839 Query: 109 accccaaccttgtccacgcgcagagcatcct 139 |||||| ||| || ||||||||||||||||| Sbjct: 840 accccagcctggtgcacgcgcagagcatcct 870
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct: 376 tggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccg 435 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 436 agcctgatccacgcgcagagcatcct 461 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 550 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 594
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgaggg 88 |||||||||||||||||| | ||||||||| ||||||| Sbjct: 361 gtctggttcaaggccggcgcccagatcttcgctgaggg 398
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct: 66618 tggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccg 66677 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 66678 agcctgatccacgcgcagagcatcct 66703 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 66792 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 66836
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct: 447 tggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccg 506 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 507 agcctgatccacgcgcagagcatcct 532 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 621 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 665
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct: 446 tggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccg 505 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 506 agcctgatccacgcgcagagcatcct 531 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 620 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 664
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 52.0 bits (26), Expect = 0.001 Identities = 71/86 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || ||||||||| ||||| || ||||| ||||| || ||||| Sbjct: 876 tggttcaaggcggggtcgcagatcttcagcgagggcgggctcgactacctcggcaacccg 935 Query: 114 aaccttgtccacgcgcagagcatcct 139 | ||| ||||||||||||||||||| Sbjct: 936 agcctgatccacgcgcagagcatcct 961 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 1067 cttcgacccgctcggcctcgccga 1090
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgg 106 |||||||||||||||||||| | ||||| ||| | || ||||| ||||| |||||||| Sbjct: 1331 ccgtctggttcaaggccggcgcccagattttcgccgacggtggcctcgactaccttgg 1388
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttc 80 |||||||||||||| ||||||||||||||| Sbjct: 458 gtctggttcaaggcgggctctcagatcttc 487
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgaggg 88 |||||||||||||||||| | ||||||||| ||||||| Sbjct: 377 gtctggttcaaggccggcgcccagatcttcgctgaggg 414
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgaggg 88 |||||||||||||||||| | ||||||||| ||||||| Sbjct: 825 gtctggttcaaggccggcgcccagatcttcgctgaggg 862
>gb|BT013404.1| Lycopersicon esculentum clone 135718R, mRNA sequence Length = 926 Score = 50.1 bits (25), Expect = 0.004 Identities = 127/161 (78%) Strand = Plus / Plus Query: 108 aaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctc 167 ||||| ||||||||||| || ||||| || || || ||||| || ||||| || | || Sbjct: 473 aaccctaaccttgtccatgctcagagtattctagctgtgctaggtttccaagtggtgctt 532 Query: 168 atgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgac 227 ||||| ||||||||||| ||| | |||||||| || || || || || ||||||||| Sbjct: 533 atgggacttgttgaaggtttcagaatcaacggacttccaggcgttggagaaggcaacgac 592 Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgc 268 | |||||||| ||||| || || ||||| ||||||||||| Sbjct: 593 ttataccccggtggccaatattttgacccactcggccttgc 633
>gb|AY617090.1| Pinus monticola chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || |||||||| ||||| Sbjct: 408 tggttcaaggcgggagctcagattttcagcgagggagggcttgactaccttggaaaccct 467 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 468 agccttatccacgcgcagagcattcttgc 496
>gb|AY617089.1| Pinus lambertiana chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || |||||||| ||||| Sbjct: 408 tggttcaaggcgggagctcagattttcagcgagggagggcttgactaccttggaaaccct 467 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 468 agccttatccacgcgcagagcattcttgc 496
>gb|AY617088.1| Pinus flexilis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || |||||||| ||||| Sbjct: 408 tggttcaaggcgggagctcagattttcagcgagggagggcttgactaccttggaaaccct 467 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 468 agccttatccacgcgcagagcattcttgc 496
>emb|X60275.1|LELHBC1G L.esculentum lhbC1 gene for LHCII type III Length = 1802 Score = 50.1 bits (25), Expect = 0.004 Identities = 127/161 (78%) Strand = Plus / Plus Query: 108 aaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtccttctc 167 ||||| ||||||||||| || ||||| || || || ||||| || ||||| || | || Sbjct: 981 aaccctaaccttgtccatgctcagagtattctagctgtgctaggtttccaagtggtgctt 1040 Query: 168 atgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggcaacgac 227 ||||| ||||||||||| ||| | |||||||| || || || || || ||||||||| Sbjct: 1041 atgggacttgttgaaggtttcagaatcaacggacttccaggcgttggagaaggcaacgac 1100 Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgc 268 | |||||||| ||||| || || ||||| ||||||||||| Sbjct: 1101 ttataccccggtggccaatattttgacccactcggccttgc 1141
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Plus Query: 99 taccttgggaaccccaaccttgtccacgcgcagagcatcct 139 ||||| ||||||||| ||| |||||||||||||||||||| Sbjct: 610 tacctggggaacccctccctggtccacgcgcagagcatcct 650
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/48 (91%), Gaps = 3/48 (6%) Strand = Plus / Plus Query: 228 ctctaccccggcggccagtacttcgacccgctcggccttgccgacgac 275 ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct: 150 ctctaccccggcggc-ag--cttcgacccgctcggcctcgccgacgac 194 Score = 40.1 bits (20), Expect = 3.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 84 gagggtggtctcgattaccttgggaaccccaaccttgtccacgcgcagagcatcct 139 ||||| || ||||| ||||| || ||||| | ||| ||||||||||||||||||| Sbjct: 6 gagggcgggctcgactacctcggcaacccgagcctgatccacgcgcagagcatcct 61
>gb|AY103838.1| Zea mays PCO113775 mRNA sequence Length = 958 Score = 50.1 bits (25), Expect = 0.004 Identities = 37/41 (90%) Strand = Plus / Plus Query: 230 ctaccccggcggccagtacttcgacccgctcggccttgccg 270 |||||| |||||| ||| |||||||||||||||||| |||| Sbjct: 615 ctacccgggcggcaagttcttcgacccgctcggcctcgccg 655
>dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572a, complete sequence Length = 48924 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || | |||||||||||||||||||| || || || | || ||||| Sbjct: 40293 tggttcaaggctggtgcccagatcttctctgagggtggccttgactatttaggcaaccca 40352 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 ||||| |||| || |||||||||||||| Sbjct: 40353 aacctgatccatgctcagagcatccttgc 40381
>dbj|AU066541.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl+paraquat inducible, partial cds, clone:M27 Length = 687 Score = 50.1 bits (25), Expect = 0.004 Identities = 58/69 (84%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattacctt 104 ||||| || ||||||||||| ||| | ||||||||||||||||| || || || ||||| Sbjct: 341 gagccagtttggttcaaggcaggcgcccagatcttctctgagggcggccttgactacctg 400 Query: 105 gggaacccc 113 || |||||| Sbjct: 401 ggcaacccc 409
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 50.1 bits (25), Expect = 0.004 Identities = 73/89 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| |||||||||||||| ||||||||||| ||||| ||| | || ||| | || | Sbjct: 431 ccgtttggttcaaggccggagctcagatcttcagcgagggaggtttggactacttgggca 490 Query: 109 accccaaccttgtccacgcgcagagcatc 137 |||||| |||||| ||||| ||||||||| Sbjct: 491 accccagccttgtgcacgctcagagcatc 519
>gb|AY267623.1| Bigelowiella natans chlorophyll a/b-binding protein II 1 mRNA, complete cds; nuclear gene for plastid product Length = 1284 Score = 48.1 bits (24), Expect = 0.015 Identities = 57/68 (83%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattacctt 104 ||||| || ||||||||||| || || ||||||||| ||||||| || || || |||||| Sbjct: 629 gagcctgtttggttcaaggctggatcccagatcttcgctgagggcggacttgactacctt 688 Query: 105 gggaaccc 112 || ||||| Sbjct: 689 ggaaaccc 696
>gb|AY617096.1| Picea sitchensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 763 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 ||||||||||||||||||||| |||||| Sbjct: 599 cttcgacccgctcggccttgctgacgac 626
>gb|AF268319.1|AF268319 Chlorarachnion CCMP621 light-harvesting complex protein LHCG4 mRNA, complete cds Length = 1191 Score = 48.1 bits (24), Expect = 0.015 Identities = 57/68 (83%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattacctt 104 ||||| || ||||||||||| || || ||||||||| ||||||| || || || |||||| Sbjct: 624 gagcctgtttggttcaaggctggatcccagatcttcgctgagggcggacttgactacctt 683 Query: 105 gggaaccc 112 || ||||| Sbjct: 684 ggaaaccc 691
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Plus Query: 116 ccttgtccacgcgcagagcatcct 139 |||||||||||||||||||||||| Sbjct: 2373 ccttgtccacgcgcagagcatcct 2396
>emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1050 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 ||||||||||||||||||||| |||||| Sbjct: 633 cttcgacccgctcggccttgctgacgac 660
>emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1062 Score = 48.1 bits (24), Expect = 0.015 Identities = 27/28 (96%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccgacgac 275 ||||||||||||||||||||| |||||| Sbjct: 630 cttcgacccgctcggccttgctgacgac 657
>dbj|AB050126.1| Amaranthus tricolor cab3 mRNA for type III chlorophyll a/b-binding protein, partial cds Length = 467 Score = 48.1 bits (24), Expect = 0.015 Identities = 168/216 (77%) Strand = Plus / Plus Query: 42 aaggagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattac 101 |||||||| || ||||||||||| || |||| || ||||| || || || || || ||| Sbjct: 154 aaggagccagtttggttcaaggcaggagctcaaattttctcggaaggaggactagactac 213 Query: 102 cttgggaaccccaaccttgtccacgcgcagagcatccttgccgtgcttggcttccaggtc 161 | || ||||||||||| || || || || ||||| || || ||||| || ||||| || Sbjct: 214 ttgggcaaccccaacctagttcatgctcaaagcattctagctgtgctcgggttccaagta 273 Query: 162 cttctcatgggtcttgttgaagggttccgcatcaacggtctcgatggtgtcggcgagggc 221 | |||||||| || |||||||| || || || || ||| | ||||| || || ||||| Sbjct: 274 gtcctcatgggcctcgttgaaggttttcgtattaatggtttggatggagttggtgagggt 333 Query: 222 aacgacctctaccccggcggccagtacttcgacccg 257 || ||||||||||| || ||||| ||||| |||||| Sbjct: 334 aatgacctctacccaggtggccaatactttgacccg 369
>gb|DQ226725.1| Boechera divaricarpa isolate SLW-A-F06 mRNA sequence Length = 452 Score = 46.1 bits (23), Expect = 0.061 Identities = 56/67 (83%) Strand = Plus / Plus Query: 69 tctcagatcttctctgagggtggtctcgattaccttgggaaccccaaccttgtccacgcg 128 |||||||||||||| || || ||||| |||||||| || ||||| ||| | |||||||| Sbjct: 1 tctcagatcttctcagaaggaggtcttgattacctcggaaaccctaacttgatccacgcg 60 Query: 129 cagagca 135 || |||| Sbjct: 61 caaagca 67
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 46.1 bits (23), Expect = 0.061 Identities = 65/79 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || ||||||||||| ||||| ||||| || ||||| || | Sbjct: 379 ccgtgtggttcaaggctggtgctcagatcttccaggagggcggtctggactacctgggca 438 Query: 109 accccaaccttgtccacgc 127 |||||||||| || ||||| Sbjct: 439 accccaacctggtgcacgc 457
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 46.1 bits (23), Expect = 0.061 Identities = 65/79 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || ||||||||||| ||||| ||||| || ||||| || | Sbjct: 939 ccgtgtggttcaaggctggtgctcagatcttccaggagggcggtctggactacctgggca 998 Query: 109 accccaaccttgtccacgc 127 |||||||||| || ||||| Sbjct: 999 accccaacctggtgcacgc 1017
>gb|AY617087.1| Pinus chiapensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Plus Query: 100 accttgggaaccccaaccttgtccacgcgcagagcatccttgc 142 ||||||| ||||| | |||| |||||||||||||||| ||||| Sbjct: 454 accttggaaaccctagccttatccacgcgcagagcattcttgc 496
>gb|M97171.1|SOYCAB6A Glycine max chlorophyll a/b binding protein type II (Cab-6) gene, complete cds; nuclear gene for chloroplast product Length = 1322 Score = 46.1 bits (23), Expect = 0.061 Identities = 77/95 (81%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || || ||||||||||| ||||| || || || ||| | || | Sbjct: 698 ccgtgtggttcaaggctggttcacagatcttctcggagggaggacttgactacttgggca 757 Query: 109 accccaaccttgtccacgcgcagagcatccttgcc 143 |||| ||||| |||| || || |||||||||||| Sbjct: 758 acccaaacctgatccatgctcaaagcatccttgcc 792
>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29 Length = 1162 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Plus Query: 231 taccccggcggccagtacttcgacccgctcggcct 265 |||||||||||| |||||||||||||||||||| Sbjct: 659 taccccggcggctcctacttcgacccgctcggcct 693
>emb|X16536.1|GMCAB5 G.max DNA for Cab5 Length = 1467 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtgg 91 |||| |||||||||||||| |||||||| ||| ||||||||| Sbjct: 707 ccgtgtggttcaaggccgggtctcagatattcagtgagggtgg 749
>emb|X12980.1|GMCAB2 Soybean Cab2 gene for minor PSII LHCII chlorophyll a/b binding protein Length = 1354 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtgg 91 |||| |||||||||||||| |||||||| ||| ||||||||| Sbjct: 606 ccgtatggttcaaggccgggtctcagatattcagtgagggtgg 648
>gb|AY103995.1| Zea mays PCO102677 mRNA sequence Length = 1225 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Plus Query: 231 taccccggcggccagtacttcgacccgctcggcct 265 |||||||||||| |||||||||||||||||||| Sbjct: 704 taccccggcggctcctacttcgacccgctcggcct 738
>gb|U01964.1|GMU01964 Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding protein (lhcb1*7) gene, complete cds Length = 1882 Score = 46.1 bits (23), Expect = 0.061 Identities = 38/43 (88%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtgg 91 |||| |||||||||||||| |||||||| ||| ||||||||| Sbjct: 1137 ccgtgtggttcaaggccgggtctcagatattcagtgagggtgg 1179
>gb|M86906.1|PEACHLROPH Pea (subclone AB9) Cab9 gene, 3' end Length = 1919 Score = 46.1 bits (23), Expect = 0.061 Identities = 68/83 (81%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || || || |||||| ||||||||| || || ||| | || ||||| Sbjct: 175 tggttcaaggcaggatcacaaatcttcagtgagggtggacttgactacttgggtaaccca 234 Query: 114 aaccttgtccacgcgcagagcat 136 | |||||||||||| |||||||| Sbjct: 235 agccttgtccacgcacagagcat 257
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.061 Identities = 65/79 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || ||||||||||| ||||| ||||| || ||||| || | Sbjct: 363 ccgtgtggttcaaggctggtgctcagatcttccaggagggcggtctggactacctgggca 422 Query: 109 accccaaccttgtccacgc 127 |||||||||| || ||||| Sbjct: 423 accccaacctggtgcacgc 441
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 46.1 bits (23), Expect = 0.061 Identities = 65/79 (82%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || ||||||||||| ||||| ||||| || ||||| || | Sbjct: 852 ccgtgtggttcaaggctggtgctcagatcttccaggagggcggtctggactacctgggca 911 Query: 109 accccaaccttgtccacgc 127 |||||||||| || ||||| Sbjct: 912 accccaacctggtgcacgc 930
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 tcgacccgctcggccttgccga 271 |||||||||||||||||||||| Sbjct: 1857550 tcgacccgctcggccttgccga 1857529
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttc 80 |||||||||||||||||| | ||||||||| Sbjct: 426 gtctggttcaaggccggcgcccagatcttc 455
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttc 80 |||||||||||||||||| | ||||||||| Sbjct: 261 gtctggttcaaggccggcgcccagatcttc 290
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 tcgacccgctcggccttgccga 271 |||||||||||||||||||||| Sbjct: 269048 tcgacccgctcggccttgccga 269027
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Plus Query: 232 accccggcggccagtacttcgacccgctcggcct 265 ||||||||||||||| ||||||||| || ||||| Sbjct: 611 accccggcggccagttcttcgaccccctgggcct 644 Score = 42.1 bits (21), Expect = 0.95 Identities = 57/69 (82%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattacctt 104 |||||||| ||||||||||| || ||||||||||| | ||||| || || || ||||| Sbjct: 424 gagcccgtgtggttcaaggctggtgctcagatcttcgccgagggcggcctggactacctg 483 Query: 105 gggaacccc 113 || |||||| Sbjct: 484 ggcaacccc 492
>gb|AE009457.1| Brucella melitensis 16M chromosome I, section 14 of 195 of the complete sequence Length = 10106 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 tcgacccgctcggccttgccga 271 |||||||||||||||||||||| Sbjct: 620 tcgacccgctcggccttgccga 641
>gb|AY219853.1| Nicotiana tabacum chlorophyll a/b binding protein mRNA, complete cds Length = 946 Score = 44.1 bits (22), Expect = 0.24 Identities = 70/86 (81%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || | || |||||||| || ||||| || || ||||| || ||||| Sbjct: 447 tggttcaaggcaggagcccaaatcttctcggaaggtggacttgactacctcggcaaccca 506 Query: 114 aaccttgtccacgcgcagagcatcct 139 ||||||||||| || || |||||||| Sbjct: 507 aaccttgtccatgcccaaagcatcct 532
>gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/b-binding protein (CipLhcb1*2) mRNA, complete cds; nuclear gene for chloroplast product Length = 932 Score = 44.1 bits (22), Expect = 0.24 Identities = 73/90 (81%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || |||||||| ||| ||||||||| || || ||| | || ||||| Sbjct: 441 tggttcaaggctgggtctcagatattcagtgagggtgggcttgactacttgggcaaccca 500 Query: 114 aaccttgtccacgcgcagagcatccttgcc 143 | ||| |||| || ||||||||||||||| Sbjct: 501 agcctgatccatgcacagagcatccttgcc 530
>gb|AF279248.1|AF279248 Vigna radiata LHCII type II chlorophyll a/b-binding protein (CipLhcb2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1033 Score = 44.1 bits (22), Expect = 0.24 Identities = 73/90 (81%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || | ||||||||||||||||| || || || || | |||||||| Sbjct: 444 tggttcaaggctggtgcacagatcttctctgagggaggacttgactatttggggaaccca 503 Query: 114 aaccttgtccacgcgcagagcatccttgcc 143 ||||| |||| || |||||||| |||||| Sbjct: 504 aacctgatccatgctcagagcattcttgcc 533
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 tcgacccgctcggccttgccga 271 |||||||||||||||||||||| Sbjct: 1874528 tcgacccgctcggccttgccga 1874507
>gb|AY026040.2| Sinorhizobium meliloti 2-oxoglutarate dehydrogenase E1 subunit (sucA) gene, complete cds Length = 2997 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 tcgacccgctcggccttgccga 271 |||||||||||||||||||||| Sbjct: 431 tcgacccgctcggccttgccga 452
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 250 tcgacccgctcggccttgccga 271 |||||||||||||||||||||| Sbjct: 1871656 tcgacccgctcggccttgccga 1871635
>gb|L29644.1|EGRLHCPII Euglena gracilis chlorophyll a/b binding protein (LHCPII) gene exons 1-5, 5' end Length = 3122 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctc 82 ||||||||| |||||||||| | ||||||||||| Sbjct: 1929 ccgtctggtacaaggccggcgcgcagatcttctc 1962
>gb|M21396.1|SOYCBPA Soybean light-harvesting chlorophyll a/b-binding protein (LHCPII) mRNA, 3' end Length = 911 Score = 44.1 bits (22), Expect = 0.24 Identities = 34/38 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtgg 91 |||||||||||||| |||||||| ||| ||||||||| Sbjct: 330 tggttcaaggccgggtctcagatattcagtgagggtgg 367
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 44.1 bits (22), Expect = 0.24 Identities = 34/38 (89%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtgg 91 |||||||||||||| ||||| |||||| ||||||||| Sbjct: 582 tggttcaaggccgggtctcaaatcttcagtgagggtgg 619
>gb|U03392.1|EGU03392 Euglena gracilis var. bacillaris PSII chlorophyll a/b binding protein (LHCPII) mRNA, partial cds Length = 1022 Score = 44.1 bits (22), Expect = 0.24 Identities = 31/34 (91%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctc 82 ||||||||| |||||||||| | ||||||||||| Sbjct: 752 ccgtctggtacaaggccggcgcgcagatcttctc 785
>dbj|AB013728.1| Cryptomeria japonica mRNA for light-harvesting chlorophyll a/b-binding protein of photosystem II, complete cds Length = 935 Score = 44.1 bits (22), Expect = 0.24 Identities = 73/90 (81%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| ||||| ||||||||| |||||| ||| | || || | || ||||| Sbjct: 402 tggttcaaggcgggctcacagatcttcagtgagggcggtttggactatttgggcaaccct 461 Query: 114 aaccttgtccacgcgcagagcatccttgcc 143 | ||| || ||||| ||||||||||||||| Sbjct: 462 agcctggtgcacgcacagagcatccttgcc 491
>gb|AY653768.1| Bradyrhizobium yuanmingense strain LMTR28 ATP synthase subunit beta (atpD) gene, partial cds Length = 483 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gcgagggcaacgacctctacc 234 ||||||||||||||||||||| Sbjct: 284 gcgagggcaacgacctctacc 304
>gb|DQ185425.1| Rosa roxburghii clone C40 defense-related mRNA, partial sequence Length = 304 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Minus Query: 232 accccggcggccagtacttcgacccgctcggccttgc 268 ||||||||||||| ||||| ||||| || |||||||| Sbjct: 304 accccggcggccaatactttgacccactgggccttgc 268
>emb|AJ294409.1|MRA294409 Mycoplana ramosa partial atpD gene for ATP synthase beta subunit, strain ATCC 49678 Length = 443 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gcgagggcaacgacctctacc 234 ||||||||||||||||||||| Sbjct: 254 gcgagggcaacgacctctacc 274
>gb|DQ018376.1| Pinus krempfii chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 752 Score = 42.1 bits (21), Expect = 0.95 Identities = 72/89 (80%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || ||||| || ||||| Sbjct: 405 tggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaaccct 464 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 465 agccttatccacgcgcagagcattcttgc 493
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 42.1 bits (21), Expect = 0.95 Identities = 72/89 (80%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || ||||| || ||||| Sbjct: 408 tggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaaccct 467 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 468 agccttatccacgcgcagagcattcttgc 496
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 42.1 bits (21), Expect = 0.95 Identities = 72/89 (80%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || ||||| || ||||| Sbjct: 397 tggttcaaggcgggagctcagattttcagcgagggaggrcttgactacctgggaaaccct 456 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 457 agccttatccacgcgcagagcattcttgc 485
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 42.1 bits (21), Expect = 0.95 Identities = 72/89 (80%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || ||||| || ||||| Sbjct: 408 tggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaaccct 467 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 468 agccttatccacgcgcagagcattcttgc 496
>gb|AY617091.1| Pinus strobus chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 42.1 bits (21), Expect = 0.95 Identities = 72/89 (80%) Strand = Plus / Plus Query: 54 tggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaacccc 113 ||||||||||| || ||||||| ||| ||||| || || || ||||| || ||||| Sbjct: 408 tggttcaaggcgggagctcagattttcagcgagggagggcttgactacctgggaaaccct 467 Query: 114 aaccttgtccacgcgcagagcatccttgc 142 | |||| |||||||||||||||| ||||| Sbjct: 468 agccttatccacgcgcagagcattcttgc 496
>gb|AF268321.1|AF268321 Chlorarachnion CCMP621 light-harvesting complex protein LHCG12 mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 0.95 Identities = 36/41 (87%) Strand = Plus / Plus Query: 45 gagcccgtctggttcaaggccggctctcagatcttctctga 85 ||||| |||||||||||||| || || ||||||||| |||| Sbjct: 627 gagcctgtctggttcaaggctggatcccagatcttcgctga 667
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 214 gcgagggcaacgacctctacc 234 ||||||||||||||||||||| Sbjct: 5002442 gcgagggcaacgacctctacc 5002422
>emb|Z29965.1|TRLHCABBP T.repens (Huia) mRNA for light-harvesting chlorophyll a/b binding protein Length = 680 Score = 42.1 bits (21), Expect = 0.95 Identities = 36/41 (87%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtgg 91 |||||||| ||||| || | |||||||||||||||||||| Sbjct: 91 gtctggtttaaggctggtgcccagatcttctctgagggtgg 131
>emb|AJ891288.1| Bradyrhizobium sp. 4S16 partial atpD gene for ATP synthase beta chain, strain 4S16 Length = 485 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 gcgagggcaacgacctctacc 234 ||||||||||||||||||||| Sbjct: 284 gcgagggcaacgacctctacc 304
>ref|NM_113685.3| Arabidopsis thaliana LHCB2:4; chlorophyll binding AT3G27690 (LHCB2:4) mRNA, complete cds Length = 946 Score = 40.1 bits (20), Expect = 3.8 Identities = 71/88 (80%) Strand = Plus / Plus Query: 49 ccgtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttggga 108 |||| ||||||||||| || ||||| |||||||| || || || || || ||||| || | Sbjct: 441 ccgtgtggttcaaggcaggatctcaaatcttctcagaaggagggcttgactacctcggaa 500 Query: 109 accccaaccttgtccacgcgcagagcat 136 |||| ||| | |||||||||| ||||| Sbjct: 501 accctaacttgatccacgcgcaaagcat 528
>gb|AY818400.1| Manihot esculenta chloroplast chlorophyll A/B binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 732 Score = 40.1 bits (20), Expect = 3.8 Identities = 74/92 (80%) Strand = Plus / Plus Query: 51 gtctggttcaaggccggctctcagatcttctctgagggtggtctcgattaccttgggaac 110 ||||||||||| || || | || ||||| || || |||||||| ||||| ||||| || Sbjct: 319 gtctggttcaaagctggagcccaaatcttttcagaaggtggtcttgattatcttggcaat 378 Query: 111 cccaaccttgtccacgcgcagagcatccttgc 142 || |||||| |||| || ||||| |||||||| Sbjct: 379 cctaaccttatccatgctcagagtatccttgc 410
>gb|AC130542.4| Mus musculus chromosome 6 clone RP24-167F4, complete sequence Length = 192106 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 cttggcttccaggtccttct 166 |||||||||||||||||||| Sbjct: 156348 cttggcttccaggtccttct 156329
>gb|AY954742.1| Ostreococcus tauri chloroplast prasinophyte chlorophyll a/b-binding protein Lhcp2.3 gene, complete cds; nuclear gene for chloroplast product Length = 1066 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 cttcgacccgctcggccttgccga 271 |||||||||||||||||| ||||| Sbjct: 850 cttcgacccgctcggcctcgccga 873 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,479,007 Number of Sequences: 3902068 Number of extensions: 1479007 Number of successful extensions: 32143 Number of sequences better than 10.0: 292 Number of HSP's better than 10.0 without gapping: 290 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 31585 Number of HSP's gapped (non-prelim): 530 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
