ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30j17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete sequence Length = 231807 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattatttattc 292 |||||||||||||||||||||||||| Sbjct: 148251 tatataaaatatttaattatttattc 148276
>gb|AC025419.42| Homo sapiens 12 BAC RP11-230G5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170331 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 438 ttgttattttacactaaatattttctgt 465 |||||||||| ||||||||||||||||| Sbjct: 97078 ttgttatttttcactaaatattttctgt 97105
>gb|AC127254.3| Mus musculus BAC clone RP24-290D19 from chromosome 9, complete sequence Length = 187995 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 273 aaatatttaattatttattccaa 295 ||||||||||||||||||||||| Sbjct: 119084 aaatatttaattatttattccaa 119062
>gb|AC119815.9| Mus musculus chromosome 3, clone RP23-53G15, complete sequence Length = 175386 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 60 ttcatgatgttatagagatatttatgt 86 |||||||||||||| |||||||||||| Sbjct: 109998 ttcatgatgttataaagatatttatgt 110024
>gb|AC158956.6| Mus musculus chromosome 3, clone RP23-370F14, complete sequence Length = 174060 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 60 ttcatgatgttatagagatatttatgt 86 |||||||||||||| |||||||||||| Sbjct: 160054 ttcatgatgttataaagatatttatgt 160028
>emb|BX248396.10| Zebrafish DNA sequence from clone CH211-219M13, complete sequence Length = 196673 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 274 aatatttaattatttattccaaa 296 ||||||||||||||||||||||| Sbjct: 88698 aatatttaattatttattccaaa 88676
>gb|AC116315.2| Homo sapiens chromosome 1 clone RP11-211J9, complete sequence Length = 154057 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 cttatttttccttgctgtgtgatctt 53 |||||| ||||||||||||||||||| Sbjct: 82611 cttattcttccttgctgtgtgatctt 82586
>gb|AC099060.2| Homo sapiens chromosome 1 clone RP11-415A20, complete sequence Length = 152692 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 cttatttttccttgctgtgtgatctt 53 |||||| ||||||||||||||||||| Sbjct: 45487 cttattcttccttgctgtgtgatctt 45462
>ref|XM_310958.2| Anopheles gambiae str. PEST ENSANGP00000019328 (ENSANGG00000016839), partial mRNA Length = 3933 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 576 aagctgcttgtggaggtggacaaggaagccctca 609 |||||||| |||||||||||| |||| ||||||| Sbjct: 1447 aagctgctggtggaggtggacgaggacgccctca 1480
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 264 atctatataaaatatttaattattta 289 |||||||||||||||| ||||||||| Sbjct: 41699 atctatataaaatattaaattattta 41674
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttatt 291 ||||||||||||||||||||| Sbjct: 125873 taaaatatttaattatttatt 125893
>ref|XM_639785.1| Dictyostelium discoideum hypothetical protein (DDB0168898), partial mRNA Length = 1485 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 aatctatataaaatatttaat 283 ||||||||||||||||||||| Sbjct: 575 aatctatataaaatatttaat 555
>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 atatttaattatttattccaa 295 ||||||||||||||||||||| Sbjct: 57641 atatttaattatttattccaa 57661
>gb|AF121351.2| Mus musculus chromosome X clone CT7-228O4 complete sequence Length = 123212 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 aaaatatttaattatttattc 292 ||||||||||||||||||||| Sbjct: 79057 aaaatatttaattatttattc 79037
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 aaaatatttaattatttattc 292 ||||||||||||||||||||| Sbjct: 22528 aaaatatttaattatttattc 22508
>gb|AY196151.1| Solanum tuberosum nematode resistance protein (Gro1-4) gene, Gro1-4-P40 allele, complete cds Length = 14664 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattta 289 ||||||||||||||||||||| Sbjct: 1110 tataaaatatttaattattta 1090
>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence Length = 234816 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 actgaattgcttatttttcct 39 ||||||||||||||||||||| Sbjct: 163876 actgaattgcttatttttcct 163856
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttatt 291 ||||||||||||||||||||| Sbjct: 16200694 taaaatatttaattatttatt 16200714
>gb|AY663410.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 105171 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 65286 tttaattttcctatattatat 65306
>gb|AY663404.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 109441 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 70580 tttaattttcctatattatat 70600
>gb|AY663398.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01960 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030201 allele and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*030101 allele, complete cds Length = 73220 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 50597 tttaattttcctatattatat 50617
>gb|AY663393.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14661 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0303 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 78546 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 44503 tttaattttcctatattatat 44523
>emb|CR382279.1| M.truncatula DNA sequence from clone MTH2-15G18 on chromosome 3, complete sequence Length = 140041 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 aatatttaattatttattcca 294 ||||||||||||||||||||| Sbjct: 15601 aatatttaattatttattcca 15581
>gb|AC144935.3| Mus musculus BAC clone RP24-340M21 from chromosome 9, complete sequence Length = 109624 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctatataaaatatttaattat 286 ||||||||||||||||||||| Sbjct: 65950 ctatataaaatatttaattat 65930
>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence Length = 154390 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 602 agccctcatccccatggctgctact 626 |||||||||||||||||||| |||| Sbjct: 56004 agccctcatccccatggctgatact 56028
>emb|Z78063.1|CEF45D3 Caenorhabditis elegans Cosmid F45D3, complete sequence Length = 37434 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 ttttctgtaacaaaaatgtag 478 ||||||||||||||||||||| Sbjct: 30526 ttttctgtaacaaaaatgtag 30546
>ref|XM_723266.1| Plasmodium yoelii yoelii str. 17XNL RNA polymerase A/beta'/A'' subunit (PY01037) partial mRNA Length = 6063 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 ttttaattttcctatattatattta 410 |||||||||| |||||||||||||| Sbjct: 1209 ttttaatttttctatattatattta 1185
>gb|AC073203.9| Homo sapiens BAC clone RP11-313M4 from 7, complete sequence Length = 150227 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattatt 287 ||||||||||||||||||||| Sbjct: 58097 tatataaaatatttaattatt 58117
>ref|XM_733825.1| Plasmodium chabaudi chabaudi DNA-directed RNA polymerase 3 largest subunit (PC001293.02.0) partial mRNA Length = 1251 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 ttttaattttcctatattatattta 410 |||||||||| |||||||||||||| Sbjct: 54 ttttaatttttctatattatattta 30
>ref|XM_671859.1| Plasmodium berghei strain ANKA DNA-directed RNA polymerase 3 largest subunit (PB000871.03.0) partial mRNA Length = 4470 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 ttttaattttcctatattatattta 410 |||||||||| |||||||||||||| Sbjct: 1206 ttttaatttttctatattatattta 1182
>gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, complete sequence Length = 166861 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatt 287 ||||||||||||||||||||| Sbjct: 117147 tatataaaatatttaattatt 117127
>gb|AC144402.2| Atelerix albiventris clone LBNL4-89B6, complete sequence Length = 161430 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 269 tataaaatatttaattatttattcc 293 ||||||||||||| ||||||||||| Sbjct: 44634 tataaaatatttatttatttattcc 44610
>gb|AC145219.16| Medicago truncatula clone mth2-6m1, complete sequence Length = 140462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 aatatttaattatttattcca 294 ||||||||||||||||||||| Sbjct: 79344 aatatttaattatttattcca 79324
>emb|BX276094.4| Human DNA sequence from clone RP11-156J5 on chromosome 10, complete sequence Length = 58437 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatt 287 ||||||||||||||||||||| Sbjct: 39060 tatataaaatatttaattatt 39040
>emb|BX248406.4| Human DNA sequence from clone DASS-390M22 on chromosome 6, complete sequence Length = 124787 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 2216 tttaattttcctatattatat 2196
>emb|BX322532.2| Human DNA sequence from clone RP11-543A11 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ16613) and the 5' end of one variant of the OPN3 gene for opsin 3 (encephalopsin, panopsin), complete sequence Length = 40220 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 tttaattatttattccaaact 298 ||||||||||||||||||||| Sbjct: 12679 tttaattatttattccaaact 12659
>emb|AL513492.10| Human DNA sequence from clone RP11-365P20 on chromosome 6, complete sequence Length = 113677 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttatt 291 ||||||||||||||||||||| Sbjct: 18258 taaaatatttaattatttatt 18278
>gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete sequence Length = 250078 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ataaaatatttaattatttat 290 ||||||||||||||||||||| Sbjct: 182144 ataaaatatttaattatttat 182164
>gb|AC135241.3| Mus musculus chromosome UNK clone RP24-340G21, complete sequence Length = 109610 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 ctatataaaatatttaattat 286 ||||||||||||||||||||| Sbjct: 65936 ctatataaaatatttaattat 65916
>emb|AL157402.19| Human DNA sequence from clone RP11-553K8 on chromosome 1q31.2-31.3 Contains the ATP6V1G3 gene for H+ transporting ATPase lysosomal 13kDa V1 subunit G isoform 3, two novel genes, a prostatic binding protein (PBP) pseudogene and the 5' end of the PTPRC gene for receptor type protein tyrosine phosphatase C, complete sequence Length = 210331 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttatt 291 ||||||||||||||||||||| Sbjct: 146456 taaaatatttaattatttatt 146476
>ref|XM_780873.1| PREDICTED: Strongylocentrotus purpuratus similar to CXXC finger 1 (PHD domain) (LOC580842), mRNA Length = 2539 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 aacaaaaatgtagccgaagag 486 ||||||||||||||||||||| Sbjct: 296 aacaaaaatgtagccgaagag 316
>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence Length = 176356 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 602 agccctcatccccatggctgctact 626 |||||||||||||||||||| |||| Sbjct: 156576 agccctcatccccatggctgatact 156552
>emb|BX324198.20| Zebrafish DNA sequence from clone CH211-108M2 in linkage group 7, complete sequence Length = 125395 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 tgctttaacatgtgcatctgttatttgat 168 |||||||| |||||||| ||||||||||| Sbjct: 13521 tgctttaaaatgtgcatttgttatttgat 13493
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 atataaaatatttaattattt 288 ||||||||||||||||||||| Sbjct: 1905420 atataaaatatttaattattt 1905400
>emb|AL137064.6| Human DNA sequence from clone RP5-863G3 on chromosome 6 Contains the HLA-DRB1*04011 (major histocompatibility complex, class II, DR beta 1) gene, an autosomal highly conserved pseudogene, ESTs, STSs and GSSs, complete sequence Length = 95642 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 84825 tttaattttcctatattatat 84805
>emb|CR933800.1| Homo sapiens genomic DNA; cDNA DKFZp686E02106 (from clone DKFZp686E02106) Length = 8316 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 aagcattcaatatcttcctat 430 ||||||||||||||||||||| Sbjct: 2627 aagcattcaatatcttcctat 2607
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence Length = 189532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 atataaaatatttaattattt 288 ||||||||||||||||||||| Sbjct: 44903 atataaaatatttaattattt 44883
>emb|CR753901.9| Human DNA sequence from clone DADB-166N19 on chromosome 6, complete sequence Length = 110625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 8672 tttaattttcctatattatat 8652
>emb|CR753835.3| Human DNA sequence from clone DAMA-265D9 on chromosome 6, complete sequence Length = 101064 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 76978 tttaattttcctatattatat 76958
>emb|CR753309.2| Human DNA sequence from clone DADB-102D14 on chromosome 6, complete sequence Length = 107898 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 85897 tttaattttcctatattatat 85877
>gb|AC105401.5| Homo sapiens BAC clone RP11-765K14 from 4, complete sequence Length = 30064 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 agttttaattttcctatatta 404 ||||||||||||||||||||| Sbjct: 11085 agttttaattttcctatatta 11105
>emb|BX927071.12| Zebrafish DNA sequence from clone DKEY-286O23 in linkage group 18, complete sequence Length = 143863 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatttatt 291 ||||||||||||||| ||||||||| Sbjct: 38451 tatataaaatatttatttatttatt 38427
>gb|AC110612.3| Homo sapiens BAC clone RP11-416B16 from 4, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 aagcattcaatatcttcctat 430 ||||||||||||||||||||| Sbjct: 57448 aagcattcaatatcttcctat 57468
>emb|BX247906.8| Zebrafish DNA sequence from clone DKEY-9O22 in linkage group 24, complete sequence Length = 213917 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 aaaatatttaattatttattc 292 ||||||||||||||||||||| Sbjct: 134361 aaaatatttaattatttattc 134341
>gb|AC009997.7| Homo sapiens chromosome 15 clone RP11-291H24 map 15q21.3, complete sequence Length = 200340 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 tatataaaatatttaattatttatt 291 ||||||||||||||| ||||||||| Sbjct: 52437 tatataaaatatttatttatttatt 52461
>gb|AC019274.5|AC019274 Homo sapiens, clone RP11-11P7, complete sequence Length = 186752 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 atataaaatatttaattattt 288 ||||||||||||||||||||| Sbjct: 54920 atataaaatatttaattattt 54940
>gb|AC148700.1| Macaca mulatta Major Histocompatibility Complex BAC MMU281E18, complete sequence Length = 188725 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattatat 407 ||||||||||||||||||||| Sbjct: 67589 tttaattttcctatattatat 67569
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 275 atatttaattatttattccaa 295 ||||||||||||||||||||| Sbjct: 21711621 atatttaattatttattccaa 21711641
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttatt 291 ||||||||||||||||||||| Sbjct: 16195227 taaaatatttaattatttatt 16195247
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ataaaatatttaattatttat 290 ||||||||||||||||||||| Sbjct: 33730705 ataaaatatttaattatttat 33730725
>gb|AC009523.6|AC009523 Drosophila melanogaster, chromosome 2L, region 29E-29F, BAC clone BACR05B09, complete sequence Length = 197901 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatttatt 291 |||| |||||||||||||||||||| Sbjct: 113714 tataaaaaatatttaattatttatt 113690
>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence Length = 182871 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aatctatataaaatatttaat 283 ||||||||||||||||||||| Sbjct: 48061 aatctatataaaatatttaat 48081 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 aatctatataaaatatttaat 283 ||||||||||||||||||||| Sbjct: 45273 aatctatataaaatatttaat 45293
>gb|AE014848.1| Plasmodium falciparum 3D7 chromosome 12, section 5 of 9 of the complete sequence Length = 250707 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 tatataaaatatttaattatttatt 291 ||||||||||||||| ||||||||| Sbjct: 1225 tatataaaatatttatttatttatt 1249
>dbj|AP003299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0699H05 Length = 144850 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ataaaatatttaattatttat 290 ||||||||||||||||||||| Sbjct: 83775 ataaaatatttaattatttat 83795
>dbj|AB086232.1| Mus musculus genes for BMAL1b', BMAL1b, BMAL1g, complete cds Length = 35127 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 actgaattgcttatttttcct 39 ||||||||||||||||||||| Sbjct: 5038 actgaattgcttatttttcct 5018
>gb|AC167705.2| Reniera sp. JGI-2005 clone JGIBAYC-9G8, complete sequence Length = 35396 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 atattttctgtaacaaaaatg 475 ||||||||||||||||||||| Sbjct: 10370 atattttctgtaacaaaaatg 10390
>emb|CR759865.13| Zebrafish DNA sequence from clone CH211-118E11 in linkage group 18, complete sequence Length = 95664 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 267 tatataaaatatttaattatttatt 291 ||||||||||||||| ||||||||| Sbjct: 61569 tatataaaatatttatttatttatt 61593
>emb|BX465862.7| Zebrafish DNA sequence from clone DKEY-146N1 in linkage group 4, complete sequence Length = 214562 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 gttattttacactaaatattt 460 ||||||||||||||||||||| Sbjct: 21891 gttattttacactaaatattt 21911
>gb|AE003623.2| Drosophila melanogaster chromosome 2L, section 32 of 83 of the complete sequence Length = 234635 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatttatt 291 |||| |||||||||||||||||||| Sbjct: 44053 tataaaaaatatttaattatttatt 44029
>gb|AF074841.1|AF074841 Campylobacter lari tRNA-Ala and tRNA-Ile genes, complete sequence Length = 632 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatttatt 291 |||||||||||||| |||||||||| Sbjct: 357 tatataaaatattttattatttatt 333
>gb|AY498847.1| Dengue virus type 2 strain SpH 125367 nonfunctional nonstructural protein 5 gene, partial sequence Length = 496 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 gtgtcaaagctgcttgtggag 590 ||||||||||||||||||||| Sbjct: 352 gtgtcaaagctgcttgtggag 372
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE Length = 210117 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ataaaatatttaattatttat 290 ||||||||||||||||||||| Sbjct: 207859 ataaaatatttaattatttat 207879
>emb|CR955012.2| Medicago truncatula chromosome 5 clone mth2-84f14, COMPLETE SEQUENCE Length = 117704 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ataaaatatttaattatttat 290 ||||||||||||||||||||| Sbjct: 11662 ataaaatatttaattatttat 11682
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 tatttaattatttattccaaa 296 ||||||||||||||||||||| Sbjct: 75365 tatttaattatttattccaaa 75345
>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete sequence Length = 225712 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 aaaatatttaattatttattc 292 ||||||||||||||||||||| Sbjct: 219685 aaaatatttaattatttattc 219665
>ref|NM_114840.3| Arabidopsis thaliana unknown protein AT3G49800 mRNA, complete cds Length = 1686 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 accatgtcataactcataaa 218 |||||||||||||||||||| Sbjct: 1634 accatgtcataactcataaa 1615
>ref|NM_001035440.1| Bos taurus SH3 domain binding glutamic acid-rich protein like (SH3BGRL), mRNA Length = 1664 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tttgtcatcccacttccata 342 |||||||||||||||||||| Sbjct: 1145 tttgtcatcccacttccata 1126
>gb|AC119269.9| Mus musculus chromosome 5, clone RP24-324B22, complete sequence Length = 172282 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ttatttgattaacataatgt 179 |||||||||||||||||||| Sbjct: 50789 ttatttgattaacataatgt 50770
>ref|XM_630592.1| Dictyostelium discoideum hypothetical protein (DDB0219587), partial mRNA Length = 5175 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 atataaaatatttaattatt 287 |||||||||||||||||||| Sbjct: 772 atataaaatatttaattatt 753
>gb|AC149635.1| Genomic sequence for broccoli [Brassica oleracea L. (Italica group)] BAC clone B19N3, complete sequence Length = 96718 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttat 290 |||||||||||||||||||| Sbjct: 16527 taaaatatttaattatttat 16546
>gb|U41030.2| Caenorhabditis elegans cosmid C44C1, complete sequence Length = 25428 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 acatgtgcatctgttatttg 166 |||||||||||||||||||| Sbjct: 14990 acatgtgcatctgttatttg 15009
>gb|U23514.3| Caenorhabditis elegans cosmid F48E8, complete sequence Length = 35325 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 atattttctgtaacaaaaat 474 |||||||||||||||||||| Sbjct: 23215 atattttctgtaacaaaaat 23196
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 144842 aaaatatttaattatttatt 144861
>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence Length = 192042 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 264 atctatataaaatatttaattatttatt 291 ||||| |||||||||||| ||||||||| Sbjct: 75514 atctacataaaatatttatttatttatt 75541
>gb|DQ226882.1| Boechera divaricarpa isolate SLW-C-H05 mRNA sequence Length = 451 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ggagaatcatgagaagagaa 367 |||||||||||||||||||| Sbjct: 101 ggagaatcatgagaagagaa 120
>gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-434H17, complete sequence Length = 161421 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tattagcatggctattgata 320 |||||||||||||||||||| Sbjct: 7061 tattagcatggctattgata 7042
>gb|AY663415.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0103 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 100761 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattata 406 |||||||||||||||||||| Sbjct: 52418 tttaattttcctatattata 52437
>gb|AY663414.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0103 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 118048 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 77983 ttaattttcctatattatat 78002
>gb|AY663413.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 117527 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 69125 ttaattttcctatattatat 69144
>gb|AY663412.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*110101 allele, complete cds Length = 108785 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 42566 ttaattttcctatattatat 42585
>gb|AY663411.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 99966 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 48946 ttaattttcctatattatat 48965
>gb|AY663409.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC class II antigen (HLA-DQB1) gene and MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 77506 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 42995 ttaattttcctatattatat 43014
>gb|AY663408.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*140501 allele, complete cds Length = 100515 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 47293 ttaattttcctatattatat 47312
>gb|AY663407.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*020101 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*050101 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*030101 allele, complete cds Length = 106318 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 54058 ttaattttcctatattatat 54077
>gb|AY663406.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*150101 allele, complete cds Length = 103395 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 59921 ttaattttcctatattatat 59940
>gb|AY663405.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 116082 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 49621 ttaattttcctatattatat 49640
>gb|AY663401.1| Pan troglodytes voucher Coriell Cell Repository DNA sample NS03646 MHC class II antigen (HLA-DQB1), MHC class II antigen (HLA-DQA1), and MHC class II antigen (HLA-DRB1) genes, complete cds Length = 111437 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattata 406 |||||||||||||||||||| Sbjct: 54346 tttaattttcctatattata 54365
>gb|AY663400.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*050101 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010102 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 143390 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 79896 ttaattttcctatattatat 79915
>gb|AY663399.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*020101 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*050101 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*030101 allele, complete cds Length = 105464 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 47373 ttaattttcctatattatat 47392
>gb|AY663397.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01960 MHC class II antigen (HLA-DQB1), MHC class II antigen (HLA-DQA1), and MHC class II antigen (HLA-DRB1) genes, complete cds Length = 94591 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 42761 ttaattttcctatattatat 42780
>gb|AY663396.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14660 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*050101 allele and MHC class II antigen (HLA-DQA1) gene, complete cds; and MHC class II antigen (HLA-DRB1) gene, partial cds Length = 100091 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 59266 ttaattttcctatattatat 59285
>gb|AY663395.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14660 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 104996 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 48805 ttaattttcctatattatat 48824
>gb|AY663394.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14661 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*110401 allele, complete cds Length = 127159 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 62033 ttaattttcctatattatat 62052
>gb|AC011903.4| Homo sapiens BAC clone RP11-568F18 from Y, complete sequence Length = 67475 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 67103 tataaaatatttaattattt 67084
>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome Length = 490885 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 308167 tataaaatatttaattattt 308148
>emb|AJ966573.1| Medicago sativa subsp. x varia mRNA for putative Rho GTPase (rop6 gene) Length = 1266 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tgtgatcttcagttcttcat 64 |||||||||||||||||||| Sbjct: 707 tgtgatcttcagttcttcat 726
>gb|AC138299.14| Mus musculus chromosome 18, clone RP23-296E4, complete sequence Length = 257153 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 attatttattccaaactgtt 301 |||||||||||||||||||| Sbjct: 121085 attatttattccaaactgtt 121104
>gb|AC127363.3| Mus musculus BAC clone RP23-1D23 from chromosome 8, complete sequence Length = 180977 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 34748 aaaatatttaattatttatt 34767
>gb|AC129303.5| Mus musculus BAC clone RP24-447E12 from chromosome 10, complete sequence Length = 135245 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 ccttgctgtgtgatcttcagttct 60 |||||||||||||||| ||||||| Sbjct: 4505 ccttgctgtgtgatctccagttct 4482
>gb|AC122370.4| Mus musculus BAC clone RP23-459B8 from chromosome 8, complete sequence Length = 176045 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 ttaattatttattccaaact 298 |||||||||||||||||||| Sbjct: 125595 ttaattatttattccaaact 125614
>emb|CR956613.2|RP43043M20 Pan troglodytes chromosome X BAC RP43-043M20, complete sequence Length = 81986 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 aaatattttctgtaacaaaa 472 |||||||||||||||||||| Sbjct: 13425 aaatattttctgtaacaaaa 13406
>gb|AC121774.3| Mus musculus BAC clone RP23-350E1 from chromosome 5, complete sequence Length = 191733 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ttatttgattaacataatgt 179 |||||||||||||||||||| Sbjct: 189089 ttatttgattaacataatgt 189070
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 56253 tatataaaatatttaattat 56234
>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence Length = 220068 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||| |||||||||||||||| Sbjct: 122352 atataaattatttaattatttatt 122329
>gb|AC124746.3| Mus musculus BAC clone RP23-242B22 from 15, complete sequence Length = 183209 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 attttacactaaatattttctgta 466 ||||||||||||||||| |||||| Sbjct: 82942 attttacactaaatattctctgta 82965
>gb|AC121928.2| Mus musculus BAC clone RP24-204F1 from 3, complete sequence Length = 178387 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 atataaaatatttaattatttatt 291 ||||||| |||||||||||||||| Sbjct: 178148 atataaattatttaattatttatt 178171
>ref|XM_724112.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01439) partial mRNA Length = 12300 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 3203 tatataaaatatttaattat 3222
>emb|CR854860.1| Human DNA sequence from clone XX-BQB97F8_109B10_2 on chromosome 6, complete sequence Length = 6932 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 835 ttaattttcctatattatat 816
>emb|CR383703.1| Human DNA sequence from clone RP4-633O19 on chromosome 22q11.2-13.1, complete sequence Length = 37908 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tttccttgctgtgtgatctt 53 |||||||||||||||||||| Sbjct: 34530 tttccttgctgtgtgatctt 34549
>emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on chromosome Xq21, complete sequence Length = 148691 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 98608 tatataaaatatttaattat 98627
>emb|Z70225.1|HSU165H7 Human DNA sequence from clone LL0XNC01-165H7 on chromosome X, complete sequence Length = 38461 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 265 tctatataaaatatttaattatttattccaaa 296 |||||||||||||| || |||||| ||||||| Sbjct: 7568 tctatataaaatatatatttatttcttccaaa 7537
>emb|Z84489.1|HS93N13 Human DNA sequence from clone RP1-93N13 on chromosome 6p21 Contains the HLA-DRB1*03011 and HLA-DQA1*05011 genes for major histocompatibility complex class II DR beta 1 and DQ alpha 1, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 86896 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 33855 ttaattttcctatattatat 33874
>emb|AL662789.11| Human DNA sequence from clone XXbac-254F23 on chromosome 6 contains the 5' end of the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1, the HLA-DQA1 gene for major histocompatibility complex, class II, DQ alpha 1, the HLA-DQB1 gene for major histocompatibility complex, class II, DQ beta 1, a cytochrome C oxidase polypeptide III pseudogene, a major histocompatibility complex, class II, beta polypeptide pseudogene and two CpG islands, complete sequence Length = 147557 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 32616 ttaattttcctatattatat 32597
>emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on chromosome 6 contains the HLA-DRB3 gene for major histocompatibility complex, class II, DR beta 3, a major histocompatibility complex, class II, DR beta pseudogene, the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1 and one CpG island, complete sequence Length = 130819 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 117178 ttaattttcctatattatat 117159
>emb|AL592153.6| Human DNA sequence from clone RP11-58K1 on chromosome 9 Contains the 3' end of the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 160425 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||||||||||| |||||||| Sbjct: 15356 atataaaatatttaaatatttatt 15333
>emb|AL596326.5| Human DNA sequence from clone RP11-373J16 on chromosome 1 Contains the 3' end of a novel gene, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 178309 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 91515 tattttacactaaatatttt 91534
>emb|AL513327.34| Human DNA sequence from clone RP11-415J8 on chromosome 1 Contains the gene for a novel protein (FLJ35476), the gene for a novel protein similar to ABO family protein, two novel genes, the PHC2 gene for polyhomeotic-like 2 (Drosophila) and two CpG islands, complete sequence Length = 188665 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 599 ggaagccctcatccccatgg 618 |||||||||||||||||||| Sbjct: 110414 ggaagccctcatccccatgg 110395
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattata 406 |||||||||||||||||||| Sbjct: 604721 tttaattttcctatattata 604702
>emb|AL356473.11| Human DNA sequence from clone RP11-560O20 on chromosome 6 Contains a nucleoporin 50kD (NUP50) pseudogene and a CpG island, complete sequence Length = 203182 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 aaatatttaattatttattc 292 |||||||||||||||||||| Sbjct: 92333 aaatatttaattatttattc 92314
>emb|BX897743.8| Zebrafish DNA sequence from clone CH211-164N21 in linkage group 10, complete sequence Length = 112314 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tttaacatgtgcatctgtta 162 |||||||||||||||||||| Sbjct: 98399 tttaacatgtgcatctgtta 98418
>emb|X06640.1|SPH2BL1 Strongylocentrotus purpuratus late histone gene L1 H2b Length = 1497 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 aatattttctgtaacaaaaatgta 477 ||||||| |||||||||||||||| Sbjct: 157 aatatttgctgtaacaaaaatgta 180
>emb|BX571661.1| Wolinella succinogenes, complete genome; segment 5/7 Length = 346613 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ccagttcaggactacctgaa 553 |||||||||||||||||||| Sbjct: 135256 ccagttcaggactacctgaa 135275
>emb|AL132965.1|ATT16K5 Arabidopsis thaliana DNA chromosome 3, BAC clone T16K5 Length = 97711 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 accatgtcataactcataaa 218 |||||||||||||||||||| Sbjct: 61429 accatgtcataactcataaa 61448
>emb|AL035475.7|PFMAL4P2 Plasmodium falciparum MAL4P2 Length = 234081 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 154291 aaaatatttaattatttatt 154310
>emb|BX950854.12| Zebrafish DNA sequence from clone CH211-125M22, complete sequence Length = 171896 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 67345 tatataaaatatttaattat 67364
>emb|CR847883.10| Zebrafish DNA sequence from clone DKEYP-24H10 in linkage group 1, complete sequence Length = 83811 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 13975 aaaatatttaattatttatt 13994
>emb|BX005316.8| Zebrafish DNA sequence from clone CH211-287H3, complete sequence Length = 154329 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 atataaaatatttaattatt 287 |||||||||||||||||||| Sbjct: 26218 atataaaatatttaattatt 26237
>emb|BX324005.11| Zebrafish DNA sequence from clone DKEY-115F6 in linkage group 13, complete sequence Length = 66154 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 attttcctatattatattta 410 |||||||||||||||||||| Sbjct: 25265 attttcctatattatattta 25246
>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13, complete sequence Length = 182888 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 ttattttacactaaatattt 460 |||||||||||||||||||| Sbjct: 120905 ttattttacactaaatattt 120924
>dbj|BS000589.1| Pan troglodytes chromosome Y clone:PTB-234J08, complete sequence Length = 179633 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 86887 tataaaatatttaattattt 86868
>dbj|BS000592.1| Pan troglodytes chromosome Y clone:PTB-024O19, complete sequence Length = 133142 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 102798 tataaaatatttaattattt 102779
>dbj|AB235170.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITT-4 Length = 865 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 715 tattttacactaaatatttt 696
>dbj|AB235169.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITT-3 Length = 864 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 714 tattttacactaaatatttt 695
>dbj|AB235168.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITT-2 Length = 865 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 715 tattttacactaaatatttt 696
>dbj|AB235167.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITT-1 Length = 865 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 715 tattttacactaaatatttt 696
>dbj|AB235166.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITV3 Length = 863 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 714 tattttacactaaatatttt 695
>dbj|AB235165.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITV2 Length = 863 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 714 tattttacactaaatatttt 695
>dbj|AB235164.1| Ilyoplax tansuiensis mitochondrial genes for 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, partial and complete sequences, isolate:ITV1 Length = 863 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 714 tattttacactaaatatttt 695
>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence Length = 182241 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 agatatttatgtcaaatcta 94 |||||||||||||||||||| Sbjct: 174504 agatatttatgtcaaatcta 174523
>gb|BC103122.1| Bos taurus SH3 domain binding glutamic acid-rich protein like, mRNA (cDNA clone MGC:128272 IMAGE:7986372), complete cds Length = 1664 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tttgtcatcccacttccata 342 |||||||||||||||||||| Sbjct: 1145 tttgtcatcccacttccata 1126
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 20501011 tataaaatatttaattattt 20501030
>gb|AC083801.20| Homo sapiens 3 BAC RP11-646E18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159621 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 tatataaaatatttaattatttat 290 ||||||||||||||| |||||||| Sbjct: 43871 tatataaaatatttatttatttat 43848
>dbj|AB010266.1| Mus musculus Creb-rp, Tnx and Cyp21 genes for cAMP response element binding protein-related protein, tenascin-X and steroid 21-hydroxylase, partial cds and complete sequences Length = 67977 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 13920 aaaatatttaattatttatt 13939
>gb|AC026393.11| Homo sapiens chromosome 10 clone RP11-308N23, complete sequence Length = 84208 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 41085 ttaattttcctatattatat 41104
>gb|AC105427.6| Homo sapiens BAC clone RP11-814P23 from 4, complete sequence Length = 56940 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 taaaatatttaattatttat 290 |||||||||||||||||||| Sbjct: 32551 taaaatatttaattatttat 32532
>gb|AC021518.12| Homo sapiens chromosome 8, clone RP11-313D2, complete sequence Length = 169566 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 ttatttattccaaactgttattag 306 ||||||||||||||||||| |||| Sbjct: 55326 ttatttattccaaactgtttttag 55303
>gb|AC012535.11| Homo sapiens chromosome 8, clone RP11-115G12, complete sequence Length = 173414 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 ttatttattccaaactgttattag 306 ||||||||||||||||||| |||| Sbjct: 69217 ttatttattccaaactgtttttag 69194
>gb|AC083795.5| Homo sapiens BAC clone RP11-255I10 from 4, complete sequence Length = 185371 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 440 gttattttacactaaatattttct 463 ||||||||||| |||||||||||| Sbjct: 44689 gttattttacattaaatattttct 44712
>gb|AC022833.5| Homo sapiens chromosome , clone RP11-147C21, complete sequence Length = 177019 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 tttaattttcctatattata 406 |||||||||||||||||||| Sbjct: 16469 tttaattttcctatattata 16488
>gb|AC021909.7| Homo sapiens, clone RP11-22F19, complete sequence Length = 178621 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattata 406 |||||||||||||||||||| Sbjct: 68896 tttaattttcctatattata 68877
>ref|XM_940724.1| PREDICTED: Homo sapiens alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) (A3GALT2), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 ggaagccctcatccccatgg 618 |||||||||||||||||||| Sbjct: 177 ggaagccctcatccccatgg 196
>ref|XM_060537.9| PREDICTED: Homo sapiens alpha 1,3-galactosyltransferase 2 (isoglobotriaosylceramide synthase) (A3GALT2), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 599 ggaagccctcatccccatgg 618 |||||||||||||||||||| Sbjct: 177 ggaagccctcatccccatgg 196
>gb|AC099026.1| Drosophila melanogaster, chromosome 2R, region 49F-50A, BAC clone BACR05M17, complete sequence Length = 182039 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 atataaaatatttaattatttatt 291 ||||||||||||||||||| |||| Sbjct: 71810 atataaaatatttaattatatatt 71833
>gb|AC182752.1| Gasterosteus aculeatus clone VMRC26-161K14, complete sequence Length = 162574 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 130234 tatataaaatatttaattat 130215
>emb|BX569789.4| Zebrafish DNA sequence from clone DKEY-68O6 in linkage group 3, complete sequence Length = 244662 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 aatatttaattatttattcc 293 |||||||||||||||||||| Sbjct: 210166 aatatttaattatttattcc 210185
>emb|BX936360.5| Zebrafish DNA sequence from clone DKEY-5I18 in linkage group 18, complete sequence Length = 70821 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 aatatttaattatttattcc 293 |||||||||||||||||||| Sbjct: 31302 aatatttaattatttattcc 31321
>emb|BX890635.7| Zebrafish DNA sequence from clone DKEY-120M5, complete sequence Length = 96924 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 aaatatttaattatttattc 292 |||||||||||||||||||| Sbjct: 62367 aaatatttaattatttattc 62348
>gb|AC154264.2| Mus musculus BAC clone RP24-316B2 from chromosome 9, complete sequence Length = 166515 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 atcttcagttcttcatgatg 68 |||||||||||||||||||| Sbjct: 116834 atcttcagttcttcatgatg 116815
>gb|AC023949.6|AC023949 Homo sapiens chromosome 8, clone RP11-711B6, complete sequence Length = 191296 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 agatatttatgtcaaatcta 94 |||||||||||||||||||| Sbjct: 61715 agatatttatgtcaaatcta 61734
>ref|NM_171623.2| Caenorhabditis elegans C44C1.4b (C44C1.4) mRNA, complete cds Length = 635 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 acatgtgcatctgttatttg 166 |||||||||||||||||||| Sbjct: 595 acatgtgcatctgttatttg 576
>ref|NM_171622.2| Caenorhabditis elegans C44C1.4a (C44C1.4) mRNA, complete cds Length = 1772 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 acatgtgcatctgttatttg 166 |||||||||||||||||||| Sbjct: 771 acatgtgcatctgttatttg 752
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 tttaattttcctatattata 406 |||||||||||||||||||| Sbjct: 604721 tttaattttcctatattata 604702
>gb|AC151052.4| Mus musculus BAC clone RP24-72K12 from chromosome 7, complete sequence Length = 216989 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 188231 tatataaaatatttaattat 188250
>emb|BX322617.9| Zebrafish DNA sequence from clone DKEY-33D4, complete sequence Length = 206855 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 agttgttattttacactaaatatt 459 ||||||| |||||||||||||||| Sbjct: 15976 agttgtttttttacactaaatatt 15953
>emb|BX465842.5| Zebrafish DNA sequence from clone DKEY-164P3 in linkage group 3, complete sequence Length = 194224 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 111615 tatataaaatatttaattat 111634
>gb|AF227205.1|AF227205 Rice black streaked dwarf virus segment 10 isolate Hb-S10 64 kDa capsid protein gene, complete cds Length = 1801 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgctgtgtgatcttcagttc 59 |||||||||||||||||||| Sbjct: 1734 tgctgtgtgatcttcagttc 1753
>gb|AC016761.10| Homo sapiens BAC clone RP11-538A12 from 2, complete sequence Length = 159338 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ctagttttaattttcctata 401 |||||||||||||||||||| Sbjct: 35485 ctagttttaattttcctata 35504
>gb|AC105926.5| Homo sapiens BAC clone RP11-801F10 from 2, complete sequence Length = 93438 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 tatatttaagcattcaatat 422 |||||||||||||||||||| Sbjct: 39961 tatatttaagcattcaatat 39942
>gb|AC151722.2| Pan troglodytes BAC clone CH251-580N2 from chromosome y, complete sequence Length = 182549 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 56147 tataaaatatttaattattt 56128
>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete sequence Length = 133379 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 21389 tatataaaatatttaattat 21408
>gb|AC017032.3|AC017032 Homo sapiens BAC clone RP11-292E8 from Y, complete sequence Length = 45123 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 1628 tataaaatatttaattattt 1609
>gb|AC022236.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-425I8, complete sequence Length = 198392 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tattagcatggctattgata 320 |||||||||||||||||||| Sbjct: 194764 tattagcatggctattgata 194745
>emb|BX855605.4| Zebrafish DNA sequence from clone DKEY-266H7 in linkage group 5, complete sequence Length = 19656 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 actgaattgcttatttttcc 38 |||||||||||||||||||| Sbjct: 9199 actgaattgcttatttttcc 9180
>emb|BX296551.4| Zebrafish DNA sequence from clone CH211-224L10 in linkage group 23, complete sequence Length = 180447 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 caatctatataaaatattta 281 |||||||||||||||||||| Sbjct: 51912 caatctatataaaatattta 51893
>gb|AY190951.1| Drosophila willistoni clone DWIF01_10_N12 (D1470) genomic sequence Length = 35954 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 aaatattttctgtaacaaaa 472 |||||||||||||||||||| Sbjct: 34500 aaatattttctgtaacaaaa 34481
>gb|AC079115.7| Homo sapiens BAC clone RP11-102M8 from 2, complete sequence Length = 177285 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tgaattgcttatttttcctt 40 |||||||||||||||||||| Sbjct: 119296 tgaattgcttatttttcctt 119315
>emb|AL929392.11| Zebrafish DNA sequence from clone CH211-79L17, complete sequence Length = 172427 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 atataaaatatttaattatt 287 |||||||||||||||||||| Sbjct: 7162 atataaaatatttaattatt 7181
>gb|BT021500.1| Bos taurus SH3 domain binding glutamic acid-rich protein like (SH3BGRL), mRNA, complete cds Length = 1652 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tttgtcatcccacttccata 342 |||||||||||||||||||| Sbjct: 1147 tttgtcatcccacttccata 1128
>emb|BX950197.23| Zebrafish DNA sequence from clone CH211-123N8 in linkage group 10, complete sequence Length = 155683 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tttaacatgtgcatctgtta 162 |||||||||||||||||||| Sbjct: 56739 tttaacatgtgcatctgtta 56758
>emb|CR786578.9| Zebrafish DNA sequence from clone DKEY-231L1 in linkage group 19, complete sequence Length = 175254 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tatataaaatatttaattat 286 |||||||||||||||||||| Sbjct: 127132 tatataaaatatttaattat 127151
>emb|BX248238.5| Zebrafish DNA sequence from clone CH211-169J21 in linkage group 20, complete sequence Length = 158302 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 atattttctgtaacaaaaat 474 |||||||||||||||||||| Sbjct: 135204 atattttctgtaacaaaaat 135185
>emb|X05034.1|RNPBPG Rat C2A gene for prostatic binding protein (PBP) Length = 6029 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 ccttgctgtgtgatcttcag 56 |||||||||||||||||||| Sbjct: 2437 ccttgctgtgtgatcttcag 2456
>gb|AE003819.3| Drosophila melanogaster chromosome 2R, section 31 of 73 of the complete sequence Length = 221945 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||||||||||||||| |||| Sbjct: 202383 atataaaatatttaattatatatt 202360
>dbj|AP001877.5| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2564P9, complete sequence Length = 167306 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 agcaatctatataaaatatttaat 283 ||||||||||||||| |||||||| Sbjct: 18044 agcaatctatataaagtatttaat 18067
>gb|AC006422.1|AC006422 Drosophila melanogaster, chromosome 2R, region 50A2-50A3, P1 clones DS08976 and DS01149, complete sequence Length = 129605 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||||||||||||||| |||| Sbjct: 21354 atataaaatatttaattatatatt 21331
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 144863 aaaatatttaattatttatt 144882
>dbj|AB090329.1| Clostridium septicum genes for hyaluronidase, collagenase, hypothetical protein, partial and complete cds Length = 5273 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 1157 aaaatatttaattatttatt 1176
>emb|CR388223.15| Zebrafish DNA sequence from clone DKEY-100N19, complete sequence Length = 181759 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 267 tatataaaatatttaattatttat 290 ||||||||||||||| |||||||| Sbjct: 44820 tatataaaatatttagttatttat 44843
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 ataaaatatttaattattta 289 |||||||||||||||||||| Sbjct: 1158033 ataaaatatttaattattta 1158014
>emb|BX004975.9| Zebrafish DNA sequence from clone DKEY-14B16, complete sequence Length = 208909 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 attttcctatattatattta 410 |||||||||||||||||||| Sbjct: 34235 attttcctatattatattta 34254
>emb|BX255942.5| Zebrafish DNA sequence from clone DKEY-269K6 in linkage group 5, complete sequence Length = 203225 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 atattttctgtaacaaaaat 474 |||||||||||||||||||| Sbjct: 111734 atattttctgtaacaaaaat 111715
>emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chromosome 2, complete sequence Length = 183980 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 86389 aaaatatttaattatttatt 86370
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 aaaatatttaattatttatt 291 |||||||||||||||||||| Sbjct: 6452 aaaatatttaattatttatt 6471
>gb|AC140228.3| Mus musculus BAC clone RP24-488C4 from 10, complete sequence Length = 137705 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 ccttgctgtgtgatcttcagttct 60 |||||||||||||||| ||||||| Sbjct: 88115 ccttgctgtgtgatctccagttct 88092
>gb|U92032.1|HSU92032 Homo sapiens P1 clone 797a11 containing MHC class II DQ-beta (HLA-DQB) and MHC class II DC-alpha (HLA-DCA) genes, complete cds Length = 86217 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ttaattttcctatattatat 407 |||||||||||||||||||| Sbjct: 82350 ttaattttcctatattatat 82369
>emb|CR932980.12| Zebrafish DNA sequence from clone DKEY-81L13 in linkage group 5, complete sequence Length = 253220 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 aaatatttaattatttattc 292 |||||||||||||||||||| Sbjct: 152736 aaatatttaattatttattc 152755
>emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17, complete sequence Length = 164375 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 taaaatatttaattatttat 290 |||||||||||||||||||| Sbjct: 98900 taaaatatttaattatttat 98919
>gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, complete sequence Length = 233632 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 tcctctcgttcctatgcaga 124 |||||||||||||||||||| Sbjct: 182111 tcctctcgttcctatgcaga 182092
>emb|AL731808.26| Mouse DNA sequence from clone RP23-286E6 on chromosome 9, complete sequence Length = 124372 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||| |||||||||||||||| Sbjct: 1003 atataaactatttaattatttatt 980
>emb|AJ400612.1|TAN400612 Trioxys angelicae partial mitochondrial ATPase 6 gene for ATPase 6 subunit Length = 624 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctatataaaatatttaattattta 289 |||||||||||||| ||||||||| Sbjct: 163 ctatataaaatattaaattattta 140
>emb|AJ400610.1|TBR400610 Trioxys brevicornis partial mitochondrial ATPase 6 gene for ATPase 6 subunit Length = 624 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctatataaaatatttaattattta 289 |||||||||||||| ||||||||| Sbjct: 163 ctatataaaatattaaattattta 140
>emb|AJ400607.1|XBI400607 Xenostigmus bifasciatus partial mitochondrial ATPase 6 gene for ATPase 6 subunit Length = 624 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctatataaaatatttaattattta 289 |||||||||||||| ||||||||| Sbjct: 163 ctatataaaatattaaattattta 140
>emb|AJ400598.1|LCO400598 Lysiphlebus confusus partial mitochondrial ATPase 6 gene for ATPase 6 subunit Length = 595 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 ctatataaaatatttaattattta 289 |||||||||||||| ||||||||| Sbjct: 134 ctatataaaatattaaattattta 111
>emb|AL672195.9| Mouse DNA sequence from clone RP23-468E16 on chromosome 9, complete sequence Length = 182503 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||| |||||||||||||||| Sbjct: 181506 atataaactatttaattatttatt 181483
>emb|AJ404307.1|PSP404307 Parasorites sp. 312 18S rRNA gene, isolate 312 Length = 2170 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 582 tataaaatatttaattattt 601
>emb|AJ404306.1|PSP404306 Parasorites sp. 483 18S rRNA gene, isolate 483 Length = 2164 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 584 tataaaatatttaattattt 603
>emb|AJ404305.1|PSP404305 Parasorites sp. 1634 18S rRNA gene, isolate 1634 Length = 2325 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tataaaatatttaattattt 288 |||||||||||||||||||| Sbjct: 650 tataaaatatttaattattt 669
>emb|AL844556.4| Mouse DNA sequence from clone RP23-21N12 on chromosome 2, complete sequence Length = 178656 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 260 agcaatctatataaaatatttaat 283 |||||| ||||||||||||||||| Sbjct: 107554 agcaatatatataaaatatttaat 107577
>emb|AL450317.13| Mouse DNA sequence from clone RP23-467E4 on chromosome 9, complete sequence Length = 184651 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 gctgcttgtggaggtggaca 597 |||||||||||||||||||| Sbjct: 106197 gctgcttgtggaggtggaca 106216
>emb|AL160052.21| Human DNA sequence from clone RP11-531C18 on chromosome 9, complete sequence Length = 149868 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 268 atataaaatatttaattatttatt 291 ||||||||||||||| |||||||| Sbjct: 56897 atataaaatatttaaatatttatt 56874
>dbj|AB002114.1| Ilyoplax tansuiensis mitochondrial DNA for 12S, 16S rRNA and tRNA-Val, partial and complete sequence Length = 1611 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tattttacactaaatatttt 461 |||||||||||||||||||| Sbjct: 1088 tattttacactaaatatttt 1069
>dbj|AB024996.1| Cicer arietinum mRNA for rac-type small GTP-binding protein, complete cds Length = 1059 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 tgtgatcttcagttcttcat 64 |||||||||||||||||||| Sbjct: 707 tgtgatcttcagttcttcat 726 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,475,383 Number of Sequences: 3902068 Number of extensions: 8475383 Number of successful extensions: 209951 Number of sequences better than 10.0: 222 Number of HSP's better than 10.0 without gapping: 222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 208823 Number of HSP's gapped (non-prelim): 1128 length of query: 645 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 622 effective length of database: 17,143,297,704 effective search space: 10663131171888 effective search space used: 10663131171888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
