Clone Information

BLAST Search Result

Clone Name	bags30i13
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	262	4e-70
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	259	3e-69
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	237	9e-63
4	RL5_ARATH (P49227) 60S ribosomal protein L5	236	2e-62
5	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	162	5e-40
6	RL5_DUNSA (O22608) 60S ribosomal protein L5	162	5e-40
7	RL5_HELAN (O65353) 60S ribosomal protein L5	161	8e-40
8	RL5_CHICK (P22451) 60S ribosomal protein L5	159	3e-39
9	RL5_CAEEL (P49405) 60S ribosomal protein L5	157	2e-38
10	RL5_STYCL (Q26481) 60S ribosomal protein L5	155	6e-38
11	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	155	6e-38
12	RL5_HUMAN (P46777) 60S ribosomal protein L5	155	6e-38
13	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	155	6e-38
14	RL5_BOMMO (O76190) 60S ribosomal protein L5	154	8e-38
15	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	154	1e-37
16	RL5_RAT (P09895) 60S ribosomal protein L5	153	2e-37
17	RL5_MOUSE (P47962) 60S ribosomal protein L5	151	7e-37
18	RL5_ANOGA (O44248) 60S ribosomal protein L5	150	2e-36
19	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	139	5e-33
20	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	139	5e-33
21	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	136	2e-32
22	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	105	4e-23
23	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	59	8e-09
24	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	55	7e-08
25	RL18_METJA (P54044) 50S ribosomal protein L18P	55	7e-08
26	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	53	4e-07
27	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	50	2e-06
28	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	50	2e-06
29	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	49	5e-06
30	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	49	6e-06
31	RL18_PYRHO (O59438) 50S ribosomal protein L18P	47	2e-05
32	RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P	47	2e-05
33	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	45	7e-05
34	RL18_METVA (P14033) 50S ribosomal protein L18P	42	6e-04
35	RL18_SULSO (Q9UX88) 50S ribosomal protein L18P	41	0.001
36	RL18_SULAC (O05640) 50S ribosomal protein L18P	39	0.006
37	RL18_METTH (O26130) 50S ribosomal protein L18P	38	0.011
38	RL18_ARCFU (O28373) 50S ribosomal protein L18P	36	0.041
39	RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18)...	35	0.070
40	RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)	34	0.16
41	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	33	0.45
42	CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment)	32	0.78
43	PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosp...	32	1.0
44	SRYD_DROME (P07664) Serendipity locus protein delta	32	1.0
45	RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)	32	1.0
46	PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-pho...	31	1.3
47	FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reducta...	31	1.3
48	SOX1_MOUSE (P53783) SOX-1 protein	31	1.7
49	NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)	30	2.3
50	FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3	30	2.3
51	SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg ...	30	2.9
52	SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ...	29	5.0
53	HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) ...	29	5.0
54	DDL_SYNPX (Q7U5Q9) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	29	5.0
55	DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphat...	29	5.0
56	SYV_LACJO (Q74JZ8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t...	29	6.6
57	JUN_RAT (P17325) Transcription factor AP-1 (Activator protein 1)...	29	6.6
58	JUN_MOUSE (P05627) Transcription factor AP-1 (Activator protein ...	29	6.6
59	CBPA_DICDI (P35085) Calcium-binding protein	29	6.6
60	HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) ...	29	6.6
61	BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic ch...	29	6.6
62	POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)	29	6.6
63	DDL_STRP8 (Q8P0C4) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	28	8.6
64	DDL_STRP6 (Q5XB93) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	28	8.6
65	DDL_STRP3 (Q8K6X7) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	28	8.6
66	DDL_STRP1 (Q99Z34) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-a...	28	8.6
67	GNAL_RAT (P38406) Guanine nucleotide-binding protein G(olf), alp...	28	8.6
68	GNAL_MOUSE (Q8CGK7) Guanine nucleotide-binding protein G(olf), a...	28	8.6
69	GNAL_HUMAN (P38405) Guanine nucleotide-binding protein G(olf), a...	28	8.6

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  262 bits (669), Expect = 4e-70
 Identities = 125/152 (82%), Positives = 137/152 (90%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRV 182
           YCTGLLLARRVLK R LDQEYEGN+EATGED+ VEP+DERRPFRALLDVGLIRTTTGNRV
Sbjct: 100 YCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRV 159

Query: 183 FXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKY 362
           F            IPHSDKRFAGFKKDEKQLD++IHRKYIYGGHVADYM+S+A+EEPEK+
Sbjct: 160 FGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKF 219

Query: 363 QSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Q+HFSEY+KKGI+ADGMEALYKKVHAAIRADP
Sbjct: 220 QAHFSEYLKKGIDADGMEALYKKVHAAIRADP 251

to top

>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  259 bits (661), Expect = 3e-69
 Identities = 124/152 (81%), Positives = 136/152 (89%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRV 182
           YCTGLLLARRVL  R LDQEYEGNVEATGED+ VEP+DERRPFRALLDVGLIRTTTGNRV
Sbjct: 100 YCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRV 159

Query: 183 FXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKY 362
           F            IPHSDKRFAGFKKDEKQLD++IHRKYIYGGHVADYM+S+A+EEPEK+
Sbjct: 160 FGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKF 219

Query: 363 QSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Q+HFSEY+KKGI+ADGME+LYKKVHAAIRADP
Sbjct: 220 QAHFSEYLKKGIDADGMESLYKKVHAAIRADP 251

to top

>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  237 bits (605), Expect = 9e-63
 Identities = 114/152 (75%), Positives = 129/152 (84%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRV 182
           YCTGLLLARRVLK  ++D EYEGNVEATGED+SVEP+D RRPFRALLDVGLIRTTTGNRV
Sbjct: 99  YCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRV 158

Query: 183 FXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKY 362
           F            IPHSDKRFAG+ K+ +QLD E+HRKYI+GGHVA YM++L ++EPEKY
Sbjct: 159 FGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKY 218

Query: 363 QSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           QSHFSEYIKKGIEAD +E LYKKVHAAIRA+P
Sbjct: 219 QSHFSEYIKKGIEADELEGLYKKVHAAIRANP 250

to top

>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  236 bits (602), Expect = 2e-62
 Identities = 113/152 (74%), Positives = 127/152 (83%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRV 182
           YCTGLLLARRVLK  ++D EYEGNVEATGEDFSVEP+D RRPFRALLDVGLIRTTTGNRV
Sbjct: 99  YCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRV 158

Query: 183 FXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKY 362
           F            IPHSDKRFAGF K+ KQLDAEIHR YIYGGHV++YMK L ++EPEK 
Sbjct: 159 FGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKL 218

Query: 363 QSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Q+HFS YIKKG+EA+ +E +YKKVHAAIRA+P
Sbjct: 219 QTHFSAYIKKGVEAESIEEMYKKVHAAIRAEP 250

to top

>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  162 bits (409), Expect = 5e-40
 Identities = 82/156 (52%), Positives = 108/156 (69%), Gaps = 4/156 (2%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD----ERRPFRALLDVGLIRTTT 170
           Y TGLLLARRVLK   LD+ ++G  EA GE    E ++    ERRPF+A LDVGL RT+T
Sbjct: 99  YATGLLLARRVLKKLGLDETFKGVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTST 158

Query: 171 GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEE 350
           G RVF            IPHS+ RF G+  + ++LDAE  +KYI+GGHVA+YM++LAD++
Sbjct: 159 GARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADDD 218

Query: 351 PEKYQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
            E+Y+S F+ YI+  +EADG+E LY + HAAIR DP
Sbjct: 219 EERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP 254

to top

>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  162 bits (409), Expect = 5e-40
 Identities = 78/153 (50%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEP-SDERRPFRALLDVGLIRTTTGNR 179
           YC GLL+ARR+L   +L   Y+G  E  GED++VEP  D  +PF  LLD GL RT+TG++
Sbjct: 99  YCVGLLVARRILTKLNLADTYKGQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSK 158

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPH++KRF G+   +K+LD E+ +KYIYGGHVA+Y +++ +EEPEK
Sbjct: 159 VFAAMKGALDGGLDIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEEEPEK 216

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           YQ+HFS Y++  IE DG+E +YK+VHA IR +P
Sbjct: 217 YQAHFSSYVENEIEPDGIEDMYKEVHAKIRENP 249

to top

>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  161 bits (407), Expect = 8e-40
 Identities = 80/153 (52%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEP-SDERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLAR++L    LD+ Y G+ E TGE+F+V+P  D    FR  LDVGL+RTTTG R
Sbjct: 99  YCTGLLLARKLLSQLGLDKLYIGSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGAR 158

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            I HS KRF GF  + K+ +A++HR++I+G HVA+YM+ LA+E+ E 
Sbjct: 159 VFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEEDDEA 218

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK G+ AD +E LYKK H AIRA+P
Sbjct: 219 YKRQFSQYIKLGLNADAIEGLYKKAHEAIRANP 251

to top

>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  159 bits (402), Expect = 3e-39
 Identities = 79/153 (51%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERR-PFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    LD+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ +AE+HRK+I G +VADYM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK  I  DGME +YKK HAAIR +P
Sbjct: 218 YKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNP 250

to top

>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  157 bits (396), Expect = 2e-38
 Identities = 74/151 (49%), Positives = 103/151 (68%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRV 182
           Y TGLLLARR LK   LD  Y+G+ E TGED++VE   +R PF+A+LD+GL RTTTG+++
Sbjct: 99  YATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKI 158

Query: 183 FXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKY 362
           F            +PHS+ RF GF ++ K+ +AE HR  I G HVADYM  L +E+ ++Y
Sbjct: 159 FAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRY 218

Query: 363 QSHFSEYIKKGIEADGMEALYKKVHAAIRAD 455
           +  FS+++  G+ AD + A Y+KVH+AIRAD
Sbjct: 219 KRQFSKFLAAGLNADNLVATYQKVHSAIRAD 249

to top

>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  155 bits (391), Expect = 6e-38
 Identities = 77/153 (50%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERR-PFRALLDVGLIRTTTGNR 179
           YCTGLLL+RR+L    LD+ YEG  E  G++F VE  D +   FRA LDVGL RTTTG +
Sbjct: 98  YCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  +     AE+HR +I+GGHV++YMK L +E+ E 
Sbjct: 158 VFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEEDEEA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           ++  FS+YIK G+ AD +E +Y K HAAIR DP
Sbjct: 218 FKRQFSQYIKHGVTADTVEEMYTKAHAAIREDP 250

to top

>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  155 bits (391), Expect = 6e-38
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    +D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ +AE+HRK+I G +VADYM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK  +  D ME +YKK HAAIR +P
Sbjct: 218 YKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 250

to top

>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  155 bits (391), Expect = 6e-38
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    +D+ YEG VE TG++++VE  D +   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ +AE+HRK+I G +VADYM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK  +  D ME +YKK HAAIR +P
Sbjct: 218 YKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENP 250

to top

>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  155 bits (391), Expect = 6e-38
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    LD+ YEG VE TG++++VE  D E   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ + E+HRK+I+  +VA+YM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK G+ AD +E LYKK HA IR +P
Sbjct: 218 YKKQFSQYIKNGVTADQVEDLYKKAHAGIRENP 250

to top

>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  154 bits (390), Expect = 8e-38
 Identities = 76/153 (49%), Positives = 102/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERR-PFRALLDVGLIRTTTGNR 179
           Y TGLLLARR+L+   LD  Y G  + TG++++VEP D     FR  LDVGL RTTTG R
Sbjct: 99  YSTGLLLARRLLQRLGLDTLYTGTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRR 158

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            +PHS KRF G+  + K+ +AE+HR +I+G HVA+YM+SL  ++ + 
Sbjct: 159 VFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDS 218

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           ++  FS+YIK G+ AD +EA+YKK H AIRADP
Sbjct: 219 FKRQFSKYIKLGVTADAIEAIYKKAHEAIRADP 251

to top

>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  154 bits (389), Expect = 1e-37
 Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    LD+ YEG VE TG++++VE  D E   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ + E+HRK+I+  ++A+YM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK G+ AD +E +YKK HA IR +P
Sbjct: 218 YKKQFSQYIKNGVAADQLEDIYKKAHAGIRENP 250

to top

>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  153 bits (386), Expect = 2e-37
 Identities = 75/153 (49%), Positives = 100/153 (65%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    +D+ YEG VE  G++++VE  D +   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ +AE+HRK+I G +VADYM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK  +  D ME +YKK HAAIR +P
Sbjct: 218 YKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENP 250

to top

>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  151 bits (382), Expect = 7e-37
 Identities = 75/153 (49%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNR 179
           YCTGLLLARR+L    +D+ YEG VE  G +++VE  D +   F   LD GL RTTTGN+
Sbjct: 98  YCTGLLLARRLLNRFGMDKIYEGQVEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNK 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K+ +AE+HRK+I G +VADYM+ L +E+ + 
Sbjct: 158 VFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDA 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           Y+  FS+YIK  +  D ME +YKK HAAIR +P
Sbjct: 218 YKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENP 250

to top

>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  150 bits (378), Expect = 2e-36
 Identities = 76/153 (49%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDER-RPFRALLDVGLIRTTTGNR 179
           YCTGLL+ARR+L+   LD  Y G  + TGE++ VEP DE    FR  LDVGL RTTTG+R
Sbjct: 99  YCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSR 158

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS KRF G+  + K  +AE+HR +I+G HVA+YM++L +E+ E 
Sbjct: 159 VFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEA 218

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           ++  FS+YI  GI+AD +E +YK  HA+IR  P
Sbjct: 219 FKRQFSKYISLGIKADDIENIYKNAHASIRKIP 251

to top

>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  139 bits (349), Expect = 5e-33
 Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGE-DFSVEPSDERRPFRALLDVGLIRTTTGNR 179
           Y TGLL+ARR L    L  +YEG  E  GE + +    D  RPF+  LDVGL RT+TG+R
Sbjct: 99  YATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSR 158

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS  RF GF  + ++LD E  RKYIYGGHVA+YM+ L D++ E+
Sbjct: 159 VFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEER 218

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           YQ  FS  I  GIE+D +E +Y + +A IR DP
Sbjct: 219 YQKQFSGLIADGIESDQLEDIYAEAYAKIREDP 251

to top

>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  139 bits (349), Expect = 5e-33
 Identities = 74/153 (48%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGE-DFSVEPSDERRPFRALLDVGLIRTTTGNR 179
           Y TGLL+ARR L    L  +YEG  E  GE + +    D  RPF+  LDVGL RT+TG+R
Sbjct: 99  YATGLLVARRALAKVGLADKYEGVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSR 158

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            IPHS  RF GF  + ++LD E  RKYIYGGHVA+YM+ L D++ E+
Sbjct: 159 VFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDDDEER 218

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           YQ  FS  I  GIE+D +E +Y + +A IR DP
Sbjct: 219 YQKQFSGLIADGIESDQLEDIYAEAYAKIREDP 251

to top

>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  136 bits (343), Expect = 2e-32
 Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGE-DFSVEPSDERRPFRALLDVGLIRTTTGNR 179
           Y TGLL+ARR L+   LD+ Y+G  E  GE + +    D  RPF+  LD+GL RTTTG R
Sbjct: 98  YATGLLIARRTLQRLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGAR 157

Query: 180 VFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEK 359
           VF            +PHS+ RF G+  + +++D E+ R YI+GGHV+ YM+ LAD++ E+
Sbjct: 158 VFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADDDEER 217

Query: 360 YQSHFSEYIKKGIEADGMEALYKKVHAAIRADP 458
           +   F  Y+   I+AD +E +Y   H AIRADP
Sbjct: 218 FSELFKGYLADDIDADSLEDIYTSAHEAIRADP 250

to top

>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  105 bits (263), Expect = 4e-23
 Identities = 48/67 (71%), Positives = 54/67 (80%)
 Frame = +3

Query: 258 KDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVH 437
           KD KQLDAE+HRKYIYGGHVA YM  L ++EPEKYQSHFS YIK  +  D +E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 438 AAIRADP 458
           AAIR DP
Sbjct: 63  AAIRPDP 69

to top

>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 35/109 (32%), Positives = 54/109 (49%)
 Frame = +3

Query: 120 RRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKY 299
           RR   A+LD+GL R   G RVF            IPH ++       DE +         
Sbjct: 96  RRVEEAILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLP----DEDR--------- 142

Query: 300 IYGGHVADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           I G HVA+Y + L +E PE Y++ FS Y+++G+E + +   +++V   I
Sbjct: 143 IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

to top

>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 32/113 (28%), Positives = 58/113 (51%)
 Frame = +3

Query: 117 ERRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRK 296
           ER   RA++D+GL R   G+RVF            IPH           E+ L  E    
Sbjct: 99  ERGIERAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHG----------EEVLPPEDR-- 146

Query: 297 YIYGGHVADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAIRAD 455
            I G H+A+  + + +E+PE+Y+  FS+Y+++G++ + +   +++V + I  +
Sbjct: 147 -IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

to top

>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 31/104 (29%), Positives = 54/104 (51%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL R T GN +F            IPH           E+ L +E   + I G H
Sbjct: 101 AVLDIGLHRATKGNAIFAILKGALDAGMEIPHG----------EEILPSE---ERIRGEH 147

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +  Y + L +++ E+Y+  FS+Y++KG+E + +   ++++ A I
Sbjct: 148 IKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

to top

>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 31/104 (29%), Positives = 53/104 (50%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL   T G+ +F            +PHS++ +            E +R  I G H
Sbjct: 102 AILDIGLHPPTRGSSIFAVLKGAVDAGLNVPHSEEIYP-----------EDYR--INGEH 148

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +A+Y K+L +E+   Y+  FS Y+ KG+E + +   +++V A I
Sbjct: 149 IANYAKALKEEDEALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

to top

>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 31/104 (29%), Positives = 50/104 (48%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LDVGL +   G+RVF            IPHS++   G   DE+          +   H
Sbjct: 102 AVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG---DER----------VRCEH 148

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +A + ++L +E  E YQ  FS Y+ +G+  + +    ++V  AI
Sbjct: 149 IAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192

to top

>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 30/104 (28%), Positives = 51/104 (49%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL     G+ VF            +PHS + F     DE +         I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP----DEYR---------IRGEH 148

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +A+Y K L +++ EK++  F  Y+ KG++ + +   +++V A I
Sbjct: 149 IAEYAKMLKEQDEEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

to top

>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 29/104 (27%), Positives = 51/104 (49%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL     G+ VF            +PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSVFAVLKGAVDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +A+Y + L +++ EK++  F  Y++KG++ + +   + +V A I
Sbjct: 149 IAEYARMLKEQDEEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

to top

>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 31/93 (33%), Positives = 47/93 (50%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD GL R T G  +F            IPH DK  A    DE++L+         G H
Sbjct: 101 AVLDKGLHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTH 147

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGM 413
           V +Y +SL  E+ + Y+  FS+Y++KG+  + +
Sbjct: 148 VKNYAESLK-EDADAYKKQFSKYLEKGLNPEDL 179

to top

>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 26/104 (25%), Positives = 52/104 (50%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL     G+ +F            +PHS + F            E +R  I G H
Sbjct: 102 AILDIGLHPPVRGSSIFAVLKGAIDAGLNVPHSPEIFP-----------EDYR--IRGEH 148

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +A+Y + L +++ ++++  F  Y++KG++ + +   +++V A I
Sbjct: 149 IAEYARMLKEQDEDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

to top

>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P|
          Length = 195

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 31/104 (29%), Positives = 51/104 (49%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+G  ++T GN ++            IPHS          E  L +E     I G H
Sbjct: 101 AVLDIGRYKSTKGNALYAVLKGALDAGLNIPHS----------ETILPSE---DRIRGEH 147

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +A+Y K L + E E Y+  FS Y+K+G++ + +   +++V   I
Sbjct: 148 IANYAKMLKENE-ELYKKQFSRYLKEGLDPEQLPNHFEEVKQKI 190

to top

>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 27/106 (25%), Positives = 49/106 (46%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+ D+GL     G+R+F            IP  D    G K+D            I G H
Sbjct: 102 AVADIGLFVPVKGSRIFTAIKGAIDAGLSIPVGD---LGIKEDR-----------IKGVH 147

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAIRA 452
           +A Y + L  E PE ++  FS+Y+++G+    + + ++++   I++
Sbjct: 148 IASYAQKLEAENPELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

to top

>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 28/104 (26%), Positives = 50/104 (48%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD GL R T G  +F            IP  ++  A    DE++L+         G H
Sbjct: 103 AILDKGLHRATKGAAIFAVLKGALDAGMDIPCGEEIIA----DEERLN---------GTH 149

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAI 446
           +  Y + L ++E E Y+  FS+Y++KG+  + +   ++++   I
Sbjct: 150 IKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

to top

>RL18_SULSO (Q9UX88) 50S ribosomal protein L18P|
          Length = 199

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/103 (24%), Positives = 43/103 (41%)
 Frame = +3

Query: 144 DVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVAD 323
           D+GL   + GNRVF            IP                D  I    I G H+A 
Sbjct: 108 DIGLHVPSKGNRVFYVIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAK 153

Query: 324 YMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKKVHAAIRA 452
           Y + L  E  + Y   FS Y+++G+  + + + ++++   I++
Sbjct: 154 YAEKLKSENSDLYSKLFSRYLQRGLNPENLPSHFEEILNKIKS 196

to top

>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 24/89 (26%), Positives = 37/89 (41%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+ D+GL     G R+F            +P  D    G  KD            + G H
Sbjct: 102 AVSDIGLFVPVKGGRIFAVIKGAIDAGLKVPVGD---LGKLKDR-----------VNGSH 147

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGIE 401
           ++ Y + L +E  E Y   FS YI++G++
Sbjct: 148 ISAYAQKLKNENQELYNKLFSSYIQRGLD 176

to top

>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 25/88 (28%), Positives = 41/88 (46%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL     G++VF            +PH +        DE +         I G H
Sbjct: 101 AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGE----SVLPDESR---------IRGEH 147

Query: 315 VADYMKSLADEEPEKYQSHFSEYIKKGI 398
           + +Y +SL +EE  K    FS+Y+++G+
Sbjct: 148 IMEYAESLDEEELRK---RFSKYLERGL 172

to top

>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 35/139 (25%), Positives = 54/139 (38%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRV 182
           Y TG+L+A++ L+            +  GE              A+LD+GL   T G+RV
Sbjct: 85  YLTGILIAKKALQ------------KGIGE--------------AVLDIGLHTPTRGSRV 118

Query: 183 FXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKY 362
           F            +PHSD+      +             I G H+A Y     +  PE+ 
Sbjct: 119 FAVLRGAVEGGLEVPHSDEVLPDDSR-------------IRGEHIAAYY----EMNPER- 160

Query: 363 QSHFSEYIKKGIEADGMEA 419
              F EY K+G++   + A
Sbjct: 161 ---FGEYEKRGLKPSDLPA 176

to top

>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)|
           (HL13)
          Length = 182

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL   T G++VF            +PH+D   A + +               G H
Sbjct: 100 AVLDIGLNTATPGSKVFAIQEGAIDAGLDVPHNDSVLADWSRTR-------------GEH 146

Query: 315 VADYMKSL------ADEEPEKYQSHFSE 380
           +A+Y +SL       D +     +HF E
Sbjct: 147 IAEYAESLDEPLYSGDFDATALPAHFDE 174

to top

>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)|
          Length = 186

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 135 ALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKQLDAEIHRKYIYGGH 314
           A+LD+GL   T G++VF            IPH+D   A +++               G H
Sbjct: 100 AVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTR-------------GAH 146

Query: 315 VADYMKSLADEEP 353
           +A+Y + L  EEP
Sbjct: 147 IAEYDEQL--EEP 157

to top

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 36/134 (26%), Positives = 44/134 (32%), Gaps = 18/134 (13%)
 Frame = -3

Query: 357 SQVPHQPVTSCSQQHALHRCICGEXXXXXXXXXXXXXQISC------------HCAEYQD 214
           S+   Q  TSCS QH+    +                 +S             H   +  
Sbjct: 320 SESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNNHSGLSATGSNSVAQVSLSHPQMHPQ 379

Query: 213 HHPKLP*GHQTHGFQ*WS**GQHPGAPGKASSH-QTAQQKSPP--QWP---QHCPHIPDP 52
             P  P  H+ HG        QHP  P   + H Q   Q  PP  Q P   QH  H P+ 
Sbjct: 380 PSPHTP--HRPHGLP------QHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQHIQHHPNH 431

Query: 51  NHGT*AHGGPKADQ 10
            H T AH  P   Q
Sbjct: 432 QHQTLAHQPPPPPQ 445

to top

>CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment)|
          Length = 127

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 33/93 (35%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
 Frame = -2

Query: 268 FSSFLKPAN-----LLSLCGISR---PPSKAPLRAPNTRFPVVVLIRPTSRSARKGLLSS 113
           FSS  +P +     LL  C       PPS APL  P   FP     R +S  AR     S
Sbjct: 17  FSSLHRPPDPDRWLLLPCCSEEARGPPPSPAPL--PARLFPG----RASSPLART---PS 67

Query: 112 DGSTEKSSPVASTLPSYS*SKSRHLSTRRAKSR 14
            G+     P+   LP+ S  + R  +TRRA+SR
Sbjct: 68  AGAASACKPLLERLPTPSRRRRRRRATRRARSR 100

to top

>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
 Frame = -2

Query: 217 RPPSKAPLRAPNTR-----FPVVVLIRPTSRSARKGLLSSDGSTEKSSPVA-STLPSYS 59
           R PS++P R+PN        P V L RP ++ A  G   S     + SPVA +T P+ S
Sbjct: 347 RSPSRSPSRSPNRSPCVPPAPEVALPRPVTQGAGPGKCPSPNLQTQESPVATATSPTSS 405

to top

>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +3

Query: 231 SDKRFAGFKKDEKQLDAEIHRKYIYGGHVADYMKSLADEEPEKYQSHFSEYIKKGIEADG 410
           +D  F    KD+++ D EI R+++             DEE E+      E+I + ++   
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 411 MEALYKK 431
            EALY K
Sbjct: 173 SEALYGK 179

to top

>RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)|
          Length = 124

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = +3

Query: 3   YCTGLLLARRVLKCRDLDQEYEGNVE 80
           YCTGLLLARR+L    + + Y G VE
Sbjct: 98  YCTGLLLARRLLNRFGMXKIYGGQVE 123

to top

>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -2

Query: 217 RPPSKAPLRAPNTR-----FPVVVLIRPTSRSARKGLLSSDGSTEKSSPVAST 74
           R PS++P R+PN        P V L +P +++A  G   S     + SP A+T
Sbjct: 347 RSPSRSPSRSPNRSPCLPPAPEVALPKPVTQAAGSGRCPSPNLQAQESPAAAT 399

to top

>FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reductase (EC|
           1.18.1.2) (FNR)
          Length = 555

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +3

Query: 69  GNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNR 179
           GN  ATG +FSV  ++E R F    D GL+ T+ G R
Sbjct: 381 GNQRATGVEFSVTGTEESRRF----DAGLVLTSVGYR 413

to top

>SOX1_MOUSE (P53783) SOX-1 protein|
          Length = 391

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 153 GQHPGAPGKASSHQTAQQKSP-PQWPQHCPHIPDPNH 46
           GQHPGA G+   H  A    P P  P   PH P P H
Sbjct: 214 GQHPGAGGR---HPHAHPAHPHPHHPHAHPHNPQPMH 247

to top

>NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)|
          Length = 2077

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 51   LDQEYEGNVEATGEDFSVEPSDERRPF--RALLDVGLIRTTTGNRVF 185
            L+QE EG+V +  + F +EP ++R  F  + LLD   +     N ++
Sbjct: 942  LEQEKEGDVTSNNDQFDLEPEEQRTDFLQKILLDFLAVNAQEENLIW 988

to top

>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 41/151 (27%), Positives = 50/151 (33%), Gaps = 6/151 (3%)
 Frame = -3

Query: 444 WQHEPSCTVLPCHQPRFPS*CTH*SEIGTSQVPHQPVTSCSQQHALHRCICGEXXXXXXX 265
           +QH PS TV            TH         PH   +S S  H       G        
Sbjct: 330 YQHSPSSTV-----------STH---------PHSNQSSLSNSH-------GSGLNTTGS 362

Query: 264 XXXXXXQISCHCAEYQDHHPKLP*GHQTHGFQ*WS**GQHPGAPGKASSH--QTAQQKSP 91
                  +S H   +    P  P  H+ HG        QHP      + H  Q +Q +SP
Sbjct: 363 NSVAQVSLS-HPQMHPQPSPHPP--HRPHGLP------QHPQRSPHPAPHPQQHSQLQSP 413

Query: 90  -PQWP---QHCPHIPDPNHGT*AHGGPKADQ 10
            PQ P   QH  H P+  H T  H  P   Q
Sbjct: 414 HPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQ 444

to top

>SCMH1_MOUSE (Q8K214) Polycomb protein SCMH1 (Sex comb on midleg homolog 1)|
          Length = 706

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 26/83 (31%), Positives = 36/83 (43%)
 Frame = -2

Query: 277 SSCFSSFLKPANLLSLCGISRPPSKAPLRAPNTRFPVVVLIRPTSRSARKGLLSSDGSTE 98
           S    S LKPANL+S     R P   PL  P+   P+   +    R   KG+L   G  E
Sbjct: 506 SDLMDSALKPANLVSTSQNLRTPGYRPL-LPSCGLPLST-VSAVRRLCSKGVLK--GKKE 561

Query: 97  KSSPVASTLPSYS*SKSRHLSTR 29
           +    +    ++S    RHL +R
Sbjct: 562 RRDVESFWKLNHSPGSDRHLESR 584

to top

>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Xsiah-2)
          Length = 313

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = -3

Query: 144 PGAPGKASSHQTAQQKSPPQWPQHCPHIPDPNHGT*AHGGPKA 16
           P + G  +S    +QK PP  P H P +P    G      P A
Sbjct: 4   PSSAGPCASKPCGKQKQPPPPPPHAPSLPATISGGPGASAPPA 46

to top

>HCFC1_MESAU (P51611) Host cell factor (HCF) (HCF-1) (C1 factor) (VP16 accessory|
            protein) (VCAF) [Contains: HCF N-terminal chain 1; HCF
            N-terminal chain 2; HCF N-terminal chain 3; HCF
            N-terminal chain 4; HCF N-terminal chain 5; HCF
            N-terminal chain 6; HCF
          Length = 2090

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = -2

Query: 214  PPSKAPLRAPNTRFPVVVLIRPTSRSARKGLLSSDGSTEKSSPVASTLPSYS*SKSRHL 38
            PPSKAP++  N  F V V I+ TS       L  D + + S   + T+P Y+  K + L
Sbjct: 1855 PPSKAPVKKENQWFDVGV-IKGTSVMVTHYFLPPDDAVQ-SDDDSGTIPDYNQLKKQEL 1911

to top

>DDL_SYNPX (Q7U5Q9) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 353

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 295 LR*ISASSCFSSFLKPANLLSLCGISRPPSKAPL 194
           L+ I +  C+  F+KPANL S  GIS+  ++  L
Sbjct: 172 LKRIESGLCYPCFIKPANLGSSVGISKARNREEL 205

to top

>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1|
            GTPase-activating protein (PIP2-dependent ARF1 GAP)
            (ADP-ribosylation factor-directed GTPase-activating
            protein 1) (ARF GTPase-activating protein 1) (Development
            and differe
          Length = 1129

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
 Frame = -2

Query: 277  SSCFSSFLKPANLLSLCGISRPPSKAPL---RAPNTRFPVVVLIRPTSRSARKGLLSSDG 107
            S C SS + P + LSL G S P  K  L      N  F       PTS  A    L    
Sbjct: 741  SFCHSSSISPQDKLSLPGFSTPRDKQRLSYGAFTNQIFVSTSTDSPTSPIAEAPPLPPRN 800

Query: 106  STEKSSPVASTLP--SYS*SKSRHLSTRRAKSRP 11
            +T+      STLP  + + S S  LS +R+   P
Sbjct: 801  ATKGPPGPPSTLPLSTQTSSGSSTLSKKRSPPPP 834

to top

>SYV_LACJO (Q74JZ8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 879

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +3

Query: 234 DKRFAGFKKDEKQLDAEIHR---KYIYGGHVADYMKSLADEEPEKYQSHFSE 380
           D+  A  +K+EK+L+AE+ R   K    G VA   +++ ++E EK   + S+
Sbjct: 813 DEELAKMEKEEKRLEAEVERAEKKLSNQGFVAHAPEAVINKEKEKKADYESQ 864

to top

>JUN_RAT (P17325) Transcription factor AP-1 (Activator protein 1) (AP1)|
           (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17
           oncogene homolog)
          Length = 334

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 141 GAPGKASSHQTAQQKSPPQWPQHCP 67
           GA G A   Q  QQ+ PPQ P H P
Sbjct: 191 GATGLAFPSQPQQQQQPPQPPHHLP 215

to top

>JUN_MOUSE (P05627) Transcription factor AP-1 (Activator protein 1) (AP1)|
           (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17
           oncogene homolog) (Jun A) (AH119)
          Length = 334

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 141 GAPGKASSHQTAQQKSPPQWPQHCP 67
           GA G A   Q  QQ+ PPQ P H P
Sbjct: 191 GAAGLAFPSQPQQQQQPPQPPHHLP 215

to top

>CBPA_DICDI (P35085) Calcium-binding protein|
          Length = 467

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = -3

Query: 150 QHPGAPGKASSHQTAQQKSPPQWPQHCPHIPDPNHG 43
           Q PGAPG+    Q  Q   PPQ P      P    G
Sbjct: 87  QQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPG 122

to top

>HCFC1_MOUSE (Q61191) Host cell factor (HCF) (HCF-1) (C1 factor) [Contains: HCF|
            N-terminal chain 1; HCF N-terminal chain 2; HCF
            N-terminal chain 3; HCF N-terminal chain 4; HCF
            N-terminal chain 5; HCF N-terminal chain 6; HCF
            C-terminal chain 1; HCF C-termi
          Length = 2045

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = -2

Query: 214  PPSKAPLRAPNTRFPVVVLIRPTSRSARKGLLSSDGSTEKSSPVASTLPSYS*SKSRHL 38
            PPSKAP++  N  F V V I+ TS       L  D + + S   + T+P Y+  K + L
Sbjct: 1810 PPSKAPVKKENQWFDVGV-IKGTSVMVTHYFLPPDDAVQ-SDDDSGTVPDYNQLKKQEL 1866

to top

>BRD4_MOUSE (Q9ESU6) Bromodomain-containing protein 4 (Mitotic|
           chromosome-associated protein) (MCAP)
          Length = 1400

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
 Frame = -2

Query: 214 PPSKAPLRAPNTRFPVVVLIRPTSRSARKGLLSSDGSTEKSS--PVASTLPSYS*SKSRH 41
           PP  AP+  P    P ++   P     +KG+     +T  ++  P+          K+  
Sbjct: 259 PPPPAPVPQPVQSHPPIIATTPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLAPEPKTAK 318

Query: 40  LSTRRAKSRPVQ 5
           L  RR  SRPV+
Sbjct: 319 LGPRRESSRPVK 330

to top

>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1748

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
 Frame = -2

Query: 265 SSFLKPANLLSLCGISRP--PSKAPLRAPNTRFPVVVLIRPTSRSARKGLLSSDGSTEKS 92
           SS L+P    S+     P  P++ P R P T      L  P+   A +    S  S  ++
Sbjct: 563 SSCLQPPASPSIAAAPHPLPPAQKPPRPPTTVPTPKPLASPSQTQAAQPATQSPPSIPQT 622

Query: 91  SPVASTLPS 65
           +PV S LP+
Sbjct: 623 APVTSLLPA 631

to top

>DDL_STRP8 (Q8P0C4) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 348

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -2

Query: 268 FSSFLKPANLLSLCGISRPPSKAPLR-----APNTRFPVVVLIRPTSRSARKGLLSSDGS 104
           F  F+KPAN+ S  GIS+  +K  LR     A      V++     +R    GLL +D  
Sbjct: 167 FPIFVKPANMGSSVGISKAQTKVELRKAIQLALTYDSRVLIEQGVVAREIEVGLLGND-- 224

Query: 103 TEKSSPVASTLP 68
                 V STLP
Sbjct: 225 -----KVKSTLP 231

to top

>DDL_STRP6 (Q5XB93) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 348

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -2

Query: 268 FSSFLKPANLLSLCGISRPPSKAPLR-----APNTRFPVVVLIRPTSRSARKGLLSSDGS 104
           F  F+KPAN+ S  GIS+  +K  LR     A      V++     +R    GLL +D  
Sbjct: 167 FPIFVKPANMGSSVGISKAQTKVELRKAIQLALTYDSRVLIEQGVVAREIEVGLLGND-- 224

Query: 103 TEKSSPVASTLP 68
                 V STLP
Sbjct: 225 -----KVKSTLP 231

to top

>DDL_STRP3 (Q8K6X7) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 348

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -2

Query: 268 FSSFLKPANLLSLCGISRPPSKAPLR-----APNTRFPVVVLIRPTSRSARKGLLSSDGS 104
           F  F+KPAN+ S  GIS+  +K  LR     A      V++     +R    GLL +D  
Sbjct: 167 FPIFVKPANMGSSVGISKAQTKVELRKAIQLALTYDSRVLIEQGVVAREIEVGLLGND-- 224

Query: 103 TEKSSPVASTLP 68
                 V STLP
Sbjct: 225 -----KVKSTLP 231

to top

>DDL_STRP1 (Q99Z34) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine|
           synthetase) (D-Ala-D-Ala ligase)
          Length = 348

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -2

Query: 268 FSSFLKPANLLSLCGISRPPSKAPLR-----APNTRFPVVVLIRPTSRSARKGLLSSDGS 104
           F  F+KPAN+ S  GIS+  +K  LR     A      V++     +R    GLL +D  
Sbjct: 167 FPIFVKPANMGSSVGISKAQTKVELRKAIQLALTYDSRVLIEQGVVAREIEVGLLGND-- 224

Query: 103 TEKSSPVASTLP 68
                 V STLP
Sbjct: 225 -----KVKSTLP 231

to top

>GNAL_RAT (P38406) Guanine nucleotide-binding protein G(olf), alpha subunit|
           (Adenylate cyclase-stimulating G alpha protein,
           olfactory type)
          Length = 381

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = +3

Query: 318 ADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKK 431
           +DY+KS+A     +Y   F +++KK  + +G++A +++
Sbjct: 115 SDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFER 152

to top

>GNAL_MOUSE (Q8CGK7) Guanine nucleotide-binding protein G(olf), alpha subunit|
           (Adenylate cyclase-stimulating G alpha protein,
           olfactory type)
          Length = 381

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = +3

Query: 318 ADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKK 431
           +DY+KS+A     +Y   F +++KK  + +G++A +++
Sbjct: 115 SDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFER 152

to top

>GNAL_HUMAN (P38405) Guanine nucleotide-binding protein G(olf), alpha subunit|
           (Adenylate cyclase-stimulating G alpha protein,
           olfactory type)
          Length = 381

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = +3

Query: 318 ADYMKSLADEEPEKYQSHFSEYIKKGIEADGMEALYKK 431
           +DY+KS+A     +Y   F +++KK  + +G++A +++
Sbjct: 115 SDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFER 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,355,328
Number of Sequences: 219361
Number of extensions: 1269166
Number of successful extensions: 4347
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 4091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4306
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result