| Clone Name | bags30h08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK059523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C09, full insert sequence Length = 1515 Score = 561 bits (283), Expect = e-156 Identities = 520/599 (86%) Strand = Plus / Plus Query: 1 ggaaaagtggctttgagtatggtagaacaagctgcaaaaccacttgcccgtcctgtcagg 60 |||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 642 ggaaaagtggctctgagcatggtagaacaagctgcaaaaccgcttgcacgtcctgtcagg 701 Query: 61 gtatgggttcttgatgctactcctggcaaagttcgtgctgggttagatggtgaagatcat 120 ||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 702 gtatgggttcttgatgctactcctggcaaggttcgtgctgggggagatggcgaagatcac 761 Query: 121 cctgctgaacttatcgaggtcctcagaacaatgcctgtgcaggttaactcaaagcaggaa 180 |||||||||||||| ||| |||||||| ||||||| |||||||| |||||||| ||| Sbjct: 762 cctgctgaacttattgagtccctcagaagaatgcctatgcaggtttcttcaaagcaagaa 821 Query: 181 gttgttgatgctcttgttaaaggaaaattttctgtggatgttgcacggtgggtggcaaca 240 || || |||||||| || |||| | ||||||||||||||||||||||||||||||| ||| Sbjct: 822 gtggtggatgctctagtcaaagaacaattttctgtggatgttgcacggtgggtggctaca 881 Query: 241 aatctgagacggagcagcccatcaggaccacgatcttctccaagcttctcatggatattc 300 ||||| |||| ||||| |||| ||| ||| ||| ||| |||||||||||||||| || Sbjct: 882 aatctccgacgaagcagtccattagggtcactatcgtcttcaagcttctcatggattttt 941 Query: 301 gacttaaatggcatctctgagatgtacaagtcatatgaagatactaacctatggaggatt 360 ||| |||||||||| ||||| ||||||||||| |||||||| |||||| ||||| ||||| Sbjct: 942 gacctaaatggcatatctgacatgtacaagtcctatgaagagactaacttatgggggatt 1001 Query: 361 gtagagaacgtaccacgaggagtacacattaattttctcaaggccgaaagaagtttgcat 420 |||||||| |||||| | || || || |||||||| || || || ||||||||||||||| Sbjct: 1002 gtagagaatgtaccaaggggtgttcatattaatttccttaaagctgaaagaagtttgcat 1061 Query: 421 agatgggcccttgaagaccttcagagaattcatgctgcagaggaggtggccgcagatgag 480 |||||||| ||||| || || |||||||||||| |||| ||||| |||| ||||||||| Sbjct: 1062 agatgggctcttgatgatctccagagaattcatactgctgaggaactggctgcagatgag 1121 Query: 481 gccggaggagttgaaatgcatgtgcttgaagatgctggacactgggttcacgcagataac 540 | ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||| Sbjct: 1122 ggtggaggagttgaaatgcacgtgcttgaagatgctggacattgggttcatgcagataac 1181 Query: 541 cctgacgggctcttcagaatcctttcgtcgaccttccgcgtcgagaccagcataagagg 599 ||||| ||||| || ||||| || || || ||||||||| ||||| | | ||||||||| Sbjct: 1182 cctgatgggctatttagaattctctcatcaaccttccgcatcgaggctaccataagagg 1240
>ref|XM_463554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 933 Score = 476 bits (240), Expect = e-131 Identities = 465/540 (86%) Strand = Plus / Plus Query: 60 ggtatgggttcttgatgctactcctggcaaagttcgtgctgggttagatggtgaagatca 119 |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 381 ggtatgggttcttgatgctactcctggcaaggttcgtgctgggggagatggcgaagatca 440 Query: 120 tcctgctgaacttatcgaggtcctcagaacaatgcctgtgcaggttaactcaaagcagga 179 |||||||||||||| ||| |||||||| ||||||| |||||||| |||||||| || Sbjct: 441 ccctgctgaacttattgagtccctcagaagaatgcctatgcaggtttcttcaaagcaaga 500 Query: 180 agttgttgatgctcttgttaaaggaaaattttctgtggatgttgcacggtgggtggcaac 239 ||| || |||||||| || |||| | ||||||||||||||||||||||||||||||| || Sbjct: 501 agtggtggatgctctagtcaaagaacaattttctgtggatgttgcacggtgggtggctac 560 Query: 240 aaatctgagacggagcagcccatcaggaccacgatcttctccaagcttctcatggatatt 299 |||||| |||| ||||| |||| ||| ||| ||| ||| |||||||||||||||| || Sbjct: 561 aaatctccgacgaagcagtccattagggtcactatcgtcttcaagcttctcatggatttt 620 Query: 300 cgacttaaatggcatctctgagatgtacaagtcatatgaagatactaacctatggaggat 359 ||| |||||||||| ||||| ||||||||||| |||||||| |||||| ||||| |||| Sbjct: 621 tgacctaaatggcatatctgacatgtacaagtcctatgaagagactaacttatgggggat 680 Query: 360 tgtagagaacgtaccacgaggagtacacattaattttctcaaggccgaaagaagtttgca 419 ||||||||| |||||| | || || || |||||||| || || || |||||||||||||| Sbjct: 681 tgtagagaatgtaccaaggggtgttcatattaatttccttaaagctgaaagaagtttgca 740 Query: 420 tagatgggcccttgaagaccttcagagaattcatgctgcagaggaggtggccgcagatga 479 ||||||||| ||||| || || |||||||||||| |||| ||||| |||| |||||||| Sbjct: 741 tagatgggctcttgatgatctccagagaattcatactgctgaggaactggctgcagatga 800 Query: 480 ggccggaggagttgaaatgcatgtgcttgaagatgctggacactgggttcacgcagataa 539 || ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct: 801 gggtggaggagttgaaatgcacgtgcttgaagatgctggacattgggttcatgcagataa 860 Query: 540 ccctgacgggctcttcagaatcctttcgtcgaccttccgcgtcgagaccagcataagagg 599 |||||| ||||| || ||||| || || || ||||||||| ||||| | | ||||||||| Sbjct: 861 ccctgatgggctatttagaattctctcatcaaccttccgcatcgaggctaccataagagg 920
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Plus Query: 356 ggattgtagagaacgtaccacgaggagtacacattaattttctcaaggccgaaagaagtt 415 ||||||||||||| |||||| | || || || |||||||| || || || |||||||||| Sbjct: 38473177 ggattgtagagaatgtaccaaggggtgttcatattaatttccttaaagctgaaagaagtt 38473236 Query: 416 tgcatagatgggcccttgaagaccttcagagaattcatgctgcagaggaggtggccgcag 475 ||||||||||||| ||||| || || |||||||||||| |||| ||||| |||| |||| Sbjct: 38473237 tgcatagatgggctcttgatgatctccagagaattcatactgctgaggaactggctgcag 38473296 Query: 476 atgaggccggaggagttgaaatgcatgtgcttgaagatgctggacactgggt 527 |||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 38473297 atgagggtggaggagttgaaatgcacgtgcttgaagatgctggacattgggt 38473348 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 60 ggtatgggttcttgatgctactcctggcaaagttcgtgctgggttagatggtgaagatca 119 |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 38472544 ggtatgggttcttgatgctactcctggcaaggttcgtgctgggggagatggcgaagatca 38472603 Query: 120 tcctgctgaacttatcgaggtcctcagaacaatgcctgtgcaggtt 165 |||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 38472604 ccctgctgaacttattgagtccctcagaagaatgcctatgcaggtt 38472649 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 228 gtgggtggcaacaaatctgagacggagcagcccatcaggaccacgatcttctccaagctt 287 ||||||||| |||||||| |||| ||||| |||| ||| ||| ||| ||| ||||||| Sbjct: 38472959 gtgggtggctacaaatctccgacgaagcagtccattagggtcactatcgtcttcaagctt 38473018 Query: 288 ctcatggatattcgacttaaatggcatctctgagatgtacaagtcatatgaagatactaa 347 ||||||||| || ||| |||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 38473019 ctcatggatttttgacctaaatggcatatctgacatgtacaagtcctatgaagagactaa 38473078 Query: 348 cctatgg 354 | ||||| Sbjct: 38473079 cttatgg 38473085 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 6 agtggctttgagtatggtagaacaagctgcaaaaccacttgcccgtcctgtcagggta 63 ||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 38472390 agtggctctgagcatggtagaacaagctgcaaaaccgcttgcacgtcctgtcagggta 38472447 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 169 tcaaagcaggaagttgttgatgctcttgttaaaggaaaattttctgtggatgttgcacgg 228 |||||||| ||||| || |||||||| || |||| | ||||||||||||||||||||||| Sbjct: 38472764 tcaaagcaagaagtggtggatgctctagtcaaagaacaattttctgtggatgttgcacgg 38472823 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 525 ggttcacgcagataaccctgacgggctcttcagaatcctttcgtcgaccttccgcgtcga 584 |||||| |||||||||||||| ||||| || ||||| || || || ||||||||| |||| Sbjct: 38473587 ggttcatgcagataaccctgatgggctatttagaattctctcatcaaccttccgcatcga 38473646 Query: 585 gaccagcataagagg 599 | | | ||||||||| Sbjct: 38473647 ggctaccataagagg 38473661
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Plus Query: 356 ggattgtagagaacgtaccacgaggagtacacattaattttctcaaggccgaaagaagtt 415 ||||||||||||| |||||| | || || || |||||||| || || || |||||||||| Sbjct: 66274 ggattgtagagaatgtaccaaggggtgttcatattaatttccttaaagctgaaagaagtt 66333 Query: 416 tgcatagatgggcccttgaagaccttcagagaattcatgctgcagaggaggtggccgcag 475 ||||||||||||| ||||| || || |||||||||||| |||| ||||| |||| |||| Sbjct: 66334 tgcatagatgggctcttgatgatctccagagaattcatactgctgaggaactggctgcag 66393 Query: 476 atgaggccggaggagttgaaatgcatgtgcttgaagatgctggacactgggt 527 |||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 66394 atgagggtggaggagttgaaatgcacgtgcttgaagatgctggacattgggt 66445 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 60 ggtatgggttcttgatgctactcctggcaaagttcgtgctgggttagatggtgaagatca 119 |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 65641 ggtatgggttcttgatgctactcctggcaaggttcgtgctgggggagatggcgaagatca 65700 Query: 120 tcctgctgaacttatcgaggtcctcagaacaatgcctgtgcaggtt 165 |||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 65701 ccctgctgaacttattgagtccctcagaagaatgcctatgcaggtt 65746 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 228 gtgggtggcaacaaatctgagacggagcagcccatcaggaccacgatcttctccaagctt 287 ||||||||| |||||||| |||| ||||| |||| ||| ||| ||| ||| ||||||| Sbjct: 66056 gtgggtggctacaaatctccgacgaagcagtccattagggtcactatcgtcttcaagctt 66115 Query: 288 ctcatggatattcgacttaaatggcatctctgagatgtacaagtcatatgaagatactaa 347 ||||||||| || ||| |||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 66116 ctcatggatttttgacctaaatggcatatctgacatgtacaagtcctatgaagagactaa 66175 Query: 348 cctatgg 354 | ||||| Sbjct: 66176 cttatgg 66182 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 6 agtggctttgagtatggtagaacaagctgcaaaaccacttgcccgtcctgtcagggta 63 ||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 65487 agtggctctgagcatggtagaacaagctgcaaaaccgcttgcacgtcctgtcagggta 65544 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 169 tcaaagcaggaagttgttgatgctcttgttaaaggaaaattttctgtggatgttgcacgg 228 |||||||| ||||| || |||||||| || |||| | ||||||||||||||||||||||| Sbjct: 65861 tcaaagcaagaagtggtggatgctctagtcaaagaacaattttctgtggatgttgcacgg 65920 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 525 ggttcacgcagataaccctgacgggctcttcagaatcctttcgtcgaccttccgcgtcga 584 |||||| |||||||||||||| ||||| || ||||| || || || ||||||||| |||| Sbjct: 66684 ggttcatgcagataaccctgatgggctatttagaattctctcatcaaccttccgcatcga 66743 Query: 585 gaccagcataagagg 599 | | | ||||||||| Sbjct: 66744 ggctaccataagagg 66758
>dbj|AP003379.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408G07 Length = 126631 Score = 159 bits (80), Expect = 1e-35 Identities = 149/172 (86%) Strand = Plus / Plus Query: 356 ggattgtagagaacgtaccacgaggagtacacattaattttctcaaggccgaaagaagtt 415 ||||||||||||| |||||| | || || || |||||||| || || || |||||||||| Sbjct: 58592 ggattgtagagaatgtaccaaggggtgttcatattaatttccttaaagctgaaagaagtt 58651 Query: 416 tgcatagatgggcccttgaagaccttcagagaattcatgctgcagaggaggtggccgcag 475 ||||||||||||| ||||| || || |||||||||||| |||| ||||| |||| |||| Sbjct: 58652 tgcatagatgggctcttgatgatctccagagaattcatactgctgaggaactggctgcag 58711 Query: 476 atgaggccggaggagttgaaatgcatgtgcttgaagatgctggacactgggt 527 |||||| ||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 58712 atgagggtggaggagttgaaatgcacgtgcttgaagatgctggacattgggt 58763 Score = 131 bits (66), Expect = 3e-27 Identities = 96/106 (90%) Strand = Plus / Plus Query: 60 ggtatgggttcttgatgctactcctggcaaagttcgtgctgggttagatggtgaagatca 119 |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| Sbjct: 57959 ggtatgggttcttgatgctactcctggcaaggttcgtgctgggggagatggcgaagatca 58018 Query: 120 tcctgctgaacttatcgaggtcctcagaacaatgcctgtgcaggtt 165 |||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 58019 ccctgctgaacttattgagtccctcagaagaatgcctatgcaggtt 58064 Score = 101 bits (51), Expect = 3e-18 Identities = 108/127 (85%) Strand = Plus / Plus Query: 228 gtgggtggcaacaaatctgagacggagcagcccatcaggaccacgatcttctccaagctt 287 ||||||||| |||||||| |||| ||||| |||| ||| ||| ||| ||| ||||||| Sbjct: 58374 gtgggtggctacaaatctccgacgaagcagtccattagggtcactatcgtcttcaagctt 58433 Query: 288 ctcatggatattcgacttaaatggcatctctgagatgtacaagtcatatgaagatactaa 347 ||||||||| || ||| |||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 58434 ctcatggatttttgacctaaatggcatatctgacatgtacaagtcctatgaagagactaa 58493 Query: 348 cctatgg 354 | ||||| Sbjct: 58494 cttatgg 58500 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 6 agtggctttgagtatggtagaacaagctgcaaaaccacttgcccgtcctgtcagggta 63 ||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 57805 agtggctctgagcatggtagaacaagctgcaaaaccgcttgcacgtcctgtcagggta 57862 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 169 tcaaagcaggaagttgttgatgctcttgttaaaggaaaattttctgtggatgttgcacgg 228 |||||||| ||||| || |||||||| || |||| | ||||||||||||||||||||||| Sbjct: 58179 tcaaagcaagaagtggtggatgctctagtcaaagaacaattttctgtggatgttgcacgg 58238 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 525 ggttcacgcagataaccctgacgggctcttcagaatcctttcgtcgaccttccgcgtcga 584 |||||| |||||||||||||| ||||| || ||||| || || || ||||||||| |||| Sbjct: 59002 ggttcatgcagataaccctgatgggctatttagaattctctcatcaaccttccgcatcga 59061 Query: 585 gaccagcataagagg 599 | | | ||||||||| Sbjct: 59062 ggctaccataagagg 59076
>emb|BX829022.1|CNS0A3DW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1336 Score = 65.9 bits (33), Expect = 1e-07 Identities = 144/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 998 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1057 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || ||||| || ||| | ||| | || || | ||| || || |||| Sbjct: 1058 accttcagcgaatccacgctgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1117 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1118 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1177 Query: 557 g 557 | Sbjct: 1178 g 1178 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 705 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 754
>ref|NM_117071.3| Arabidopsis thaliana catalytic/ hydrolase AT4G10030 mRNA, complete cds Length = 1985 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 1068 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1127 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || || || || ||| | ||| | || || | ||| || || |||| Sbjct: 1128 accttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1187 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1188 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1247 Query: 557 g 557 | Sbjct: 1248 g 1248 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 776 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 825
>emb|BX827740.1|CNS0A3XZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH16ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1393 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 1063 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1122 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || || || || ||| | ||| | || || | ||| || || |||| Sbjct: 1123 accttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1182 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1183 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1242 Query: 557 g 557 | Sbjct: 1243 g 1243 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 771 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 820
>emb|BX827654.1|CNS0A3QB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 1004 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1063 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || || || || ||| | ||| | || || | ||| || || |||| Sbjct: 1064 accttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1123 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1124 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1183 Query: 557 g 557 | Sbjct: 1184 g 1184 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 712 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 761
>emb|BX827437.1|CNS0A3LQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1443 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 1064 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1123 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || || || || ||| | ||| | || || | ||| || || |||| Sbjct: 1124 accttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1183 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1184 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1243 Query: 557 g 557 | Sbjct: 1244 g 1244 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 772 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 821
>emb|BX827185.1|CNS0A3NG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZH10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 1007 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1066 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || || || || ||| | ||| | || || | ||| || || |||| Sbjct: 1067 accttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1126 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1127 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1186 Query: 557 g 557 | Sbjct: 1187 g 1187 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 715 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 764
>gb|AY088446.1| Arabidopsis thaliana clone 6718 mRNA, complete sequence Length = 1518 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 1054 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1113 Query: 437 accttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaaa 496 |||||||| |||| || || || || ||| | ||| | || || | ||| || || |||| Sbjct: 1114 accttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaaa 1173 Query: 497 tgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttca 556 ||||||| | |||||||| || || ||||||||| | |||||||| || || ||||||| Sbjct: 1174 tgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttca 1233 Query: 557 g 557 | Sbjct: 1234 g 1234 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 762 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 811
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28 Length = 198005 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 96730 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 96681 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 96038 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 95979 Query: 437 accttcagagaat 449 |||||||| |||| Sbjct: 95978 accttcagcgaat 95966
>emb|AL049481.1|ATT5L19 Arabidopsis thaliana DNA chromosome 4, BAC clone T5L19 (ESSA project) Length = 92495 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 57302 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 57253 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Minus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 56610 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 56551 Query: 437 accttcagagaat 449 |||||||| |||| Sbjct: 56550 accttcagcgaat 56538
>emb|BX826349.1|CNS0A43B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 699 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 748 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 991 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 1050 Query: 437 accttcagagaat 449 |||||||| |||| Sbjct: 1051 accttcagcgaat 1063
>emb|BX826311.1|CNS0A3ZC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1132 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 73 gatgctactcctggcaaagttcgtgctgggttagatggtgaagatcatcc 122 |||||||||||||| ||||||||||| || |||||| ||||||||||| Sbjct: 498 gatgctactcctggtaaagttcgtgcaggaggagatggagaagatcatcc 547 Score = 50.1 bits (25), Expect = 0.009 Identities = 61/73 (83%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatgggcccttgaag 436 |||||||||| | |||||||| || || |||||||| ||||| | |||||||| |||| Sbjct: 790 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttgggccctagaag 849 Query: 437 accttcagagaat 449 |||||||| |||| Sbjct: 850 accttcagcgaat 862
>gb|BT013409.1| Lycopersicon esculentum clone 135726F, mRNA sequence Length = 1640 Score = 50.1 bits (25), Expect = 0.009 Identities = 127/161 (78%) Strand = Plus / Plus Query: 406 gaaagaagtttgcatagatgggcccttgaagaccttcagagaattcatgctgcagaggag 465 ||||||||||||||||||||||| ||||| || || ||||| |||| ||| ||||| Sbjct: 1112 gaaagaagtttgcatagatgggctcttgaggatattagaagaatccatgttgctgaggaa 1171 Query: 466 gtggccgcagatgaggccggaggagttgaaatgcatgtgcttgaagatgctggacactgg 525 ||| | ||| || | || ||||| ||||||||||| || |||||||| || || ||| Sbjct: 1172 caggctgtagaggaaggaggtggagtcgaaatgcatgtcctcgaagatgcaggtcattgg 1231 Query: 526 gttcacgcagataaccctgacgggctcttcagaatcctttc 566 || || || |||||||| || ||||| |||| |||||||| Sbjct: 1232 gtacatgctgataacccagatgggctattcaagatcctttc 1272
>gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosome 14, complete sequence Length = 202424 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 151 atgcctgtgcaggttaactcaaagca 176 |||||||||||||| ||||||||||| Sbjct: 181090 atgcctgtgcaggtgaactcaaagca 181065
>gb|AY954920.1| Choristoneura fumiferana putative farnesyl diphosphate synthase mRNA, complete cds Length = 1519 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cacgatcttctccaagcttctc 290 |||||||||||||||||||||| Sbjct: 158 cacgatcttctccaagcttctc 137
>gb|AY962308.1|AY962308S1 Choristoneura fumiferana putative farnesyl diphosphate synthase (FPPS-1) gene, exons 1 through 4 Length = 7959 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 cacgatcttctccaagcttctc 290 |||||||||||||||||||||| Sbjct: 36 cacgatcttctccaagcttctc 15
>emb|BX828163.1|CNS0A3UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH59ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1359 Score = 44.1 bits (22), Expect = 0.54 Identities = 143/182 (78%), Gaps = 1/182 (0%) Strand = Plus / Plus Query: 377 gaggagtacacattaattttctcaaggccgaaagaagtttgcatagatggg-cccttgaa 435 |||||||||| | |||||||| || || |||||||| ||||| | |||| |||| ||| Sbjct: 1029 gaggagtacatgtgaattttctgaaagcggaaagaagcttgcaccgttggggccctagaa 1088 Query: 436 gaccttcagagaattcatgctgcagaggaggtggccgcagatgaggccggaggagttgaa 495 ||||||||| |||| || || || || ||| | ||| | || || | ||| || || ||| Sbjct: 1089 gaccttcagcgaatccacgccgctgaagagctagcctctgaagaaggcggtggtgtagaa 1148 Query: 496 atgcatgtgcttgaagatgctggacactgggttcacgcagataaccctgacgggctcttc 555 |||||||| | |||||||| || || ||||||||| | |||||||| || || |||||| Sbjct: 1149 atgcatgtcttggaagatgccggtcattgggttcacacggataacccggatggtctcttc 1208 Query: 556 ag 557 || Sbjct: 1209 ag 1210
>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence Length = 202273 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 151 atgcctgtgcaggttaactcaaagca 176 |||||||||||||| ||||||||||| Sbjct: 156858 atgcctgtgcaggtgaactcaaagca 156833
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 391 aattttctcaaggccgaaagaagtt 415 ||||||||||||||| ||||||||| Sbjct: 895515 aattttctcaaggcccaaagaagtt 895491
>emb|BX640521.12| Zebrafish DNA sequence from clone DKEY-125I10 in linkage group 5, complete sequence Length = 126380 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 atggtagaacaagctgcaaaa 39 ||||||||||||||||||||| Sbjct: 70889 atggtagaacaagctgcaaaa 70869
>gb|AC096947.2| Homo sapiens chromosome 1 clone RP4-802A10, complete sequence Length = 148730 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 24 agaacaagctgcaaaaccact 44 ||||||||||||||||||||| Sbjct: 87463 agaacaagctgcaaaaccact 87483
>gb|AC079141.7| Homo sapiens BAC clone RP11-502A23 from 4, complete sequence Length = 171273 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 ggaggagttgaaatgcatgtg 504 ||||||||||||||||||||| Sbjct: 164710 ggaggagttgaaatgcatgtg 164690
>gb|AC016182.24| Homo sapiens chromosome 17, clone RP11-559N14, complete sequence Length = 181971 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 cagcataagaggacgggagtg 608 ||||||||||||||||||||| Sbjct: 44204 cagcataagaggacgggagtg 44184
>emb|X53597.1|SCOYELE S.carlsbergensis DNA for old yellow enzyme Length = 1773 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ggaagttgttgatgctcttgt 197 ||||||||||||||||||||| Sbjct: 1026 ggaagttgttgatgctcttgt 1046
>ref|XM_512548.1| PREDICTED: Pan troglodytes zinc finger protein 208 (LOC455899), mRNA Length = 2645 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 agagaattcatgctgcagag 462 |||||||||||||||||||| Sbjct: 2116 agagaattcatgctgcagag 2135
>ref|XM_463876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2694 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gccgcagatgaggccggagg 488 |||||||||||||||||||| Sbjct: 2230 gccgcagatgaggccggagg 2211
>ref|XM_868013.1| PREDICTED: Bos taurus similar to RIKEN cDNA 4933403M22 (LOC616049), mRNA Length = 2129 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 508 gaagatgctggacactgggttcacgcag 535 |||||| |||||||||||| |||||||| Sbjct: 1554 gaagatcctggacactggggtcacgcag 1527
>gb|AY555838.1| Ptyctolaemus gularis NADH dehydrogenase subunit 1 (ND1) gene, partial cds; tRNA-Gln, tRNA-Ile, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; and cytochrome c oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1721 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gttgatgctcttgttaaagg 203 |||||||||||||||||||| Sbjct: 1390 gttgatgctcttgttaaagg 1371
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 cagataaccctgacgggctc 552 |||||||||||||||||||| Sbjct: 1508510 cagataaccctgacgggctc 1508529
>ref|NM_200131.1| Danio rerio zgc:55473 (zgc:55473), mRNA Length = 1692 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 tcacgcagataaccctgacgggct 551 ||||||||||||||||||| |||| Sbjct: 687 tcacgcagataaccctgaccggct 664
>ref|NM_001001411.1| Homo sapiens zinc finger protein 676 (ZNF676), mRNA Length = 2091 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 agagaattcatgctgcagag 462 |||||||||||||||||||| Sbjct: 868 agagaattcatgctgcagag 887
>gb|AC092327.4| Homo sapiens chromosome 16 clone RP11-158I3, complete sequence Length = 189756 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 tcagaacaatgcctgtgcaggtta 166 |||||||||||||||||| ||||| Sbjct: 632 tcagaacaatgcctgtgctggtta 655
>gb|AF326201.1| Halichoeres trimaculatus estrogen receptor (ER) mRNA, partial cds Length = 2423 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ctcaaagcaggaagttgttg 187 |||||||||||||||||||| Sbjct: 2136 ctcaaagcaggaagttgttg 2155
>emb|CR376771.10| Zebrafish DNA sequence from clone DKEY-160I7 in linkage group 1, complete sequence Length = 178445 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgctcttgttaaaggaaaat 208 |||||||||||||||||||| Sbjct: 42281 tgctcttgttaaaggaaaat 42262
>gb|BC044178.1| Danio rerio zgc:55473, mRNA (cDNA clone MGC:55473 IMAGE:2640182), complete cds Length = 1692 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 tcacgcagataaccctgacgggct 551 ||||||||||||||||||| |||| Sbjct: 687 tcacgcagataaccctgaccggct 664
>emb|AL772332.6| Zebrafish DNA sequence from clone CH211-150A22 in linkage group 1 Contains part of a gene similar to human PET112 for PET112-like protein from yeast, two novel genes and seven CpG islands, complete sequence Length = 175762 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 tgctcttgttaaaggaaaat 208 |||||||||||||||||||| Sbjct: 82918 tgctcttgttaaaggaaaat 82899
>dbj|AB190918.1| Oryza sativa (japonica cultivar-group) osysl8 mRNA for hypothetical protein, complete cds Length = 2085 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gccgcagatgaggccggagg 488 |||||||||||||||||||| Sbjct: 1950 gccgcagatgaggccggagg 1931
>dbj|AK097798.1| Homo sapiens cDNA FLJ40479 fis, clone TESTI2043282, moderately similar to ZINC FINGER PROTEIN 43 Length = 2091 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 agagaattcatgctgcagag 462 |||||||||||||||||||| Sbjct: 868 agagaattcatgctgcagag 887
>ref|XM_697121.1| PREDICTED: Danio rerio similar to zgc:55473 (LOC554816), mRNA Length = 691 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 528 tcacgcagataaccctgacgggct 551 ||||||||||||||||||| |||| Sbjct: 686 tcacgcagataaccctgaccggct 663
>gb|AC161379.2| Mus musculus BAC clone RP23-207P12 from chromosome 17, complete sequence Length = 189293 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 ctcttgttaaaggaaaattttctg 214 |||| ||||||||||||||||||| Sbjct: 37318 ctctagttaaaggaaaattttctg 37295
>emb|BX255960.14| Zebrafish DNA sequence from clone DKEY-265E17 in linkage group 23, complete sequence Length = 172219 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tcttgttaaaggaaaatttt 211 |||||||||||||||||||| Sbjct: 143936 tcttgttaaaggaaaatttt 143955
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 gccgcagatgaggccggagg 488 |||||||||||||||||||| Sbjct: 866471 gccgcagatgaggccggagg 866490
>gb|AC073539.3|AC073539 Homo sapiens chromosome 19 clone RP11-157B13, complete sequence Length = 184213 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 agagaattcatgctgcagag 462 |||||||||||||||||||| Sbjct: 120353 agagaattcatgctgcagag 120372
>gb|AC040170.9| Homo sapiens chromosome 16 clone RP11-514D23, complete sequence Length = 173012 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 tcagaacaatgcctgtgcaggtta 166 |||||||||||||||||| ||||| Sbjct: 78550 tcagaacaatgcctgtgctggtta 78527
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 gccgcagatgaggccggagg 488 |||||||||||||||||||| Sbjct: 75679 gccgcagatgaggccggagg 75698
>dbj|AK072347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D10, full insert sequence Length = 2692 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 gccgcagatgaggccggagg 488 |||||||||||||||||||| Sbjct: 2228 gccgcagatgaggccggagg 2209
>emb|CR381614.10| Zebrafish DNA sequence from clone DKEY-72G4 in linkage group 20, complete sequence Length = 153083 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tgcaggttaactcaaagcag 177 |||||||||||||||||||| Sbjct: 13251 tgcaggttaactcaaagcag 13270
>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14 Length = 1279711 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 aaaattttctgtggatgttg 223 |||||||||||||||||||| Sbjct: 505242 aaaattttctgtggatgttg 505261 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 aaaattttctgtggatgttg 223 |||||||||||||||||||| Sbjct: 480532 aaaattttctgtggatgttg 480551
>emb|BX901900.20| Zebrafish DNA sequence from clone CH211-189A21 in linkage group 3, complete sequence Length = 143917 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 tcttgttaaaggaaaatttt 211 |||||||||||||||||||| Sbjct: 66288 tcttgttaaaggaaaatttt 66269
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 caggaagttgttgatgctcttgtt 198 ||||||| |||||||||||||||| Sbjct: 1495148 caggaagctgttgatgctcttgtt 1495125
>emb|AL844514.12| Zebrafish DNA sequence from clone DKEY-7E20 in linkage group 1, complete sequence Length = 228327 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tgctcttgttaaaggaaaat 208 |||||||||||||||||||| Sbjct: 112963 tgctcttgttaaaggaaaat 112982
>emb|BX255880.4| Mouse DNA sequence from clone RP23-302F21 on chromosome 4, complete sequence Length = 33036 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 taattttctcaaggccgaaagaag 413 ||||||||||||||| |||||||| Sbjct: 24800 taattttctcaaggctgaaagaag 24777
>gb|AY285610.1| Sus scrofa clone UMNp940.gcg microsatellite sequence Length = 580 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ttgttgatgctcttgttaaa 201 |||||||||||||||||||| Sbjct: 161 ttgttgatgctcttgttaaa 142
>dbj|AB019439.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region, complete sequence, 3 of 5 Length = 200000 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 aaaattttctgtggatgttg 223 |||||||||||||||||||| Sbjct: 105242 aaaattttctgtggatgttg 105261 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 aaaattttctgtggatgttg 223 |||||||||||||||||||| Sbjct: 80532 aaaattttctgtggatgttg 80551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,379,299 Number of Sequences: 3902068 Number of extensions: 5379299 Number of successful extensions: 103114 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102861 Number of HSP's gapped (non-prelim): 252 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)