ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30g14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-) 204 1e-52
2GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2... 199 5e-51
3UGGG_SCHPO (Q09140) UDP-glucose:glycoprotein glucosyltransferase... 37 0.039
4PYRF_FUSNN (Q8RG83) Orotidine 5'-phosphate decarboxylase (EC 4.1... 32 0.73
5LAMA3_HUMAN (Q16787) Laminin alpha-3 chain precursor (Epiligrin ... 32 1.2
6PLNC_PENCI (P47189) Penicillolysin precursor (EC 3.4.24.39) (Deu... 32 1.2
7RFAJ_ECOLI (P27129) Lipopolysaccharide 1,2-glucosyltransferase (... 30 2.8
8PDE3B_HUMAN (Q13370) cGMP-inhibited 3',5'-cyclic phosphodiestera... 30 4.7
9LGE1_CAEEL (Q21389) Glycosyltransferase-like protein LARGE (EC 2... 29 6.2
10TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor re... 29 8.1
11TDRD7_RAT (Q9R1R4) Tudor domain-containing protein 7 (Tudor repe... 29 8.1
12EFTS_DEIRA (Q9RU80) Elongation factor Ts (EF-Ts) 29 8.1

>QUA1_ARATH (Q9LSG3) Glycosyltransferase QUASIMODO1 (EC 2.4.1.-)|
          Length = 559

 Score =  204 bits (519), Expect = 1e-52
 Identities = 97/167 (58%), Positives = 128/167 (76%), Gaps = 4/167 (2%)
 Frame = +2

Query: 11  VFSDNIIAVSVVXNSTTLNSKHPEKIVFHLVTDEVNYDPMRAWFALNDYRGAIVEIQKVE 190
           +FSDN+IA SVV NS   N+K P K VFH+VTD++N   M+  F L +Y+GA VE++ VE
Sbjct: 253 IFSDNVIAASVVVNSAVKNAKEPWKHVFHVVTDKMNLGAMQVMFKLKEYKGAHVEVKAVE 312

Query: 191 DFTWLNASYVPVLKQLQDAATQNFYFSGSGNRGTP----IKFRNPKYLSMLNHLRFYIPE 358
           D+T+LN+SYVPVLKQL+ A  Q FYF       T     +KFRNPKYLS+LNHLRFY+PE
Sbjct: 313 DYTFLNSSYVPVLKQLESANLQKFYFENKLENATKDTTNMKFRNPKYLSILNHLRFYLPE 372

Query: 359 IYPELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRF 499
           +YP+LH+++FLDDD+VVQKDL+ L+ I+++G V GAVETC  +FHR+
Sbjct: 373 MYPKLHRILFLDDDVVVQKDLTGLWEIDMDGKVNGAVETCFGSFHRY 419



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>GLTR_ARATH (Q9FWA4) Probable glycosyltransferase At3g02350 (EC 2.4.1.-)|
          Length = 561

 Score =  199 bits (505), Expect = 5e-51
 Identities = 96/168 (57%), Positives = 125/168 (74%), Gaps = 5/168 (2%)
 Frame = +2

Query: 11  VFSDNIIAVSVVXNSTTLNSKHPEKIVFHLVTDEVNYDPMRAWFALNDY-RGAIVEIQKV 187
           +FSDN+IAVSVV  S  +N++ P K VFH+VTD +N   M+ WF +    RGA VEI+ V
Sbjct: 254 IFSDNVIAVSVVVRSVVMNAEEPWKHVFHVVTDRMNLAAMKVWFKMRPLDRGAHVEIKSV 313

Query: 188 EDFTWLNASYVPVLKQLQDAATQNFYFSGSGNRGTP----IKFRNPKYLSMLNHLRFYIP 355
           EDF +LN+SY PVL+QL+ A  Q FYF       T     +KF+NPKYLSMLNHLRFY+P
Sbjct: 314 EDFKFLNSSYAPVLRQLESAKLQKFYFENQAENATKDSHNLKFKNPKYLSMLNHLRFYLP 373

Query: 356 EIYPELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETCMETFHRF 499
           E+YP+L+K++FLDDD+VVQKD++ L+ INL+G V GAVETC  +FHR+
Sbjct: 374 EMYPKLNKILFLDDDVVVQKDVTGLWKINLDGKVNGAVETCFGSFHRY 421



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>UGGG_SCHPO (Q09140) UDP-glucose:glycoprotein glucosyltransferase precursor (EC|
            2.4.1.-) (UDP--Glc:glycoprotein glucosyltransferase)
            (UGT)
          Length = 1448

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +2

Query: 347  YIPEIYP-ELHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVETC 478
            ++  ++P ELHKV+++D D +V+ DL +L  ++L+G   G    C
Sbjct: 1243 FLDVLFPLELHKVIYVDADQIVRADLQELMDMDLHGAPYGYTPMC 1287



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>PYRF_FUSNN (Q8RG83) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 237

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -2

Query: 181 LYLHNGPSVVIQGKPRPHWVIVDLVGHQMKNNLF 80
           LYL NGP V+ + K R H + +DL  H + N ++
Sbjct: 37  LYLQNGPIVIDEIKKRGHKIFLDLKLHDIPNTVY 70



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>LAMA3_HUMAN (Q16787) Laminin alpha-3 chain precursor (Epiligrin 170 kDa subunit)|
            (E170) (Nicein alpha subunit)
          Length = 1713

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
 Frame = +2

Query: 50   NSTTLNSKHPEKIVFHL--------VTDEVNYDPMRAWFALNDYRGAIVEIQKVEDFTWL 205
            NS TL +  PE +VF++        +   +++ P +    L+D    ++ +   +    L
Sbjct: 904  NSNTLLNLDPENVVFYVGGYPPDFKLPSRLSFPPYKGCIELDDLNENVLSLYNFKKTFNL 963

Query: 206  NASYVPVLKQLQDAATQNFYFSGSGNRGTPIKFRNP 313
            N + V   ++ ++ + +N YF G+G    P +   P
Sbjct: 964  NTTEVEPCRRRKEESDKN-YFEGTGYARVPTQPHAP 998



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>PLNC_PENCI (P47189) Penicillolysin precursor (EC 3.4.24.39) (Deuterolysin)|
          Length = 351

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
 Frame = +3

Query: 258 ISTSLEVVIVEHQSSSEIQSTYQCSTT*GF----------TSQKFIQNCTRWYFLMMTLL 407
           ++  LE V  E QS+S   +TY CS T G+           ++  I NC  +Y  +  L 
Sbjct: 229 VAARLEAVAKEAQSASSGSTTYYCSDTLGYCETNVLAYTLPARNIIANCDIYYSYLPAL- 287

Query: 408 FRRTCQICLQSTSTV 452
              TC    Q+T+T+
Sbjct: 288 -AGTCHQQDQATTTL 301



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>RFAJ_ECOLI (P27129) Lipopolysaccharide 1,2-glucosyltransferase (EC 2.4.1.58)|
          Length = 338

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +2

Query: 371 LHKVVFLDDDIVVQKDLSDLFTINLNGNVMGAVE 472
           L ++++LD D+V + D+S L  + LNG V   V+
Sbjct: 123 LDRLLYLDADVVCKGDISQLLHLGLNGAVAAVVK 156



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>PDE3B_HUMAN (Q13370) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1) (CGIP1)
          Length = 1112

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 238 PGCCYTEFLLLWKW*SW 288
           P CCY    L+W+W SW
Sbjct: 158 PACCYLGDFLVWQWWSW 174



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>LGE1_CAEEL (Q21389) Glycosyltransferase-like protein LARGE (EC 2.4.-.-)|
          Length = 631

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = +2

Query: 308 NPKYLSMLNHLRFYIPEIYP-ELHKVVFLDDDIVVQKDLSDL---FTINLNGNVMGAVET 475
           N  Y       +  IPEI   ++ K++F+D DI+ Q ++ DL   F    N  V G VE 
Sbjct: 118 NSHYSKYYGLSKLLIPEIIGNDIGKIMFMDVDIIFQTNIFDLWKQFRNFNNSQVFGMVEN 177

Query: 476 CMETF 490
             + +
Sbjct: 178 LSDWY 182



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>TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1086

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 350 IPEIYPELHKVVFLDDDIVVQKDLSDLFTIN-LNGNVMGAV 469
           +P+ + +++KV F +D +     LSD+ TIN ++GN   A+
Sbjct: 349 LPKAFEDMYKVKFPEDALKNLASLSDVCTINYISGNTQKAI 389



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>TDRD7_RAT (Q9R1R4) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1113

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 350 IPEIYPELHKVVFLDDDIVVQKDLSDLFTIN-LNGNVMGAV 469
           +P+ + +++KV F +D +     LSD+ TIN ++GN   A+
Sbjct: 376 LPKAFEDMYKVKFPEDALKNLASLSDVCTINYISGNTQKAI 416



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>EFTS_DEIRA (Q9RU80) Elongation factor Ts (EF-Ts)|
          Length = 264

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 140 FALNDYRGAIVEIQKVEDFTWLNASYVPVLKQLQDAATQ 256
           FA++  R A+VE+    DF   NA +   +++L  AA Q
Sbjct: 60  FAVDGNRAAMVEVNSETDFVARNADFQATVEKLAQAALQ 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,167,461
Number of Sequences: 219361
Number of extensions: 1563729
Number of successful extensions: 3907
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3902
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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