ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30f20 |
|---|---|
| Clone Library Name | barley_pub |
>RL71_ARATH (P60040) 60S ribosomal protein L7-1| Length = 242 Score = 234 bits (597), Expect = 1e-61 Identities = 116/157 (73%), Positives = 132/157 (84%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 KVVVPESVL KRKREE W + ENRK+IF RA+QY++EY ++KEL+ Sbjct: 5 KVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELIS 64 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT+ Sbjct: 65 LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATM 124 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 NMLRRVEPYV YG+PNLKSV+ELIYKRGYGKLN QRI Sbjct: 125 NMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRI 161
>RL73_ARATH (Q9LHP1) 60S ribosomal protein L7-3| Length = 244 Score = 233 bits (594), Expect = 2e-61 Identities = 115/156 (73%), Positives = 130/156 (83%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 K VVPESVL KRKREE W + E RK+IF RAKQY++EY +++EL+Q Sbjct: 7 KTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQ 66 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKATI Sbjct: 67 LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATI 126 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQR 509 NMLRRVEPYV YGYPNLKSV+ELIYKRG+GKLN QR Sbjct: 127 NMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQR 162
>RL72_ARATH (P60039) 60S ribosomal protein L7-2| Length = 242 Score = 232 bits (592), Expect = 4e-61 Identities = 116/157 (73%), Positives = 130/157 (82%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 KVVVPESVL K KR+E W S E RK+IF RA+QYA+EY +D EL++ Sbjct: 5 KVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIR 64 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 LKREA++KGGFYV PEAKLLF++RIRGINA+ PKTKKILQLLRLRQIFNGVFLKVNKAT+ Sbjct: 65 LKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATV 124 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 NMLRRVEPYV YGYPNLKSV+ELIYKRGYGKLN QRI Sbjct: 125 NMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRI 161
>RL7_YARLI (Q6C603) 60S ribosomal protein L7| Length = 250 Score = 176 bits (446), Expect = 3e-44 Identities = 84/157 (53%), Positives = 115/157 (73%) Frame = +3 Query: 45 VVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 224 V+VPE++L KRK + + E KVIF+RA++Y +EY ++E ++L Sbjct: 12 VLVPETLLKKRKNADQIRAAKEAAAAEKKAANAEKDKVIFSRAEKYVKEYREAEREQIRL 71 Query: 225 KREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATIN 404 +REA++ G FYV E KL+FV+RI+GI+ M PK +K+LQLLRL QI NGVF+++ KAT Sbjct: 72 RREAKLNGTFYVPAEPKLVFVIRIKGISKMAPKPRKVLQLLRLHQINNGVFVRITKATAE 131 Query: 405 MLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 +LR VEPY+A+GYPNL SVR+L+YKRGYGK+NKQRIP Sbjct: 132 LLRIVEPYIAFGYPNLASVRQLVYKRGYGKVNKQRIP 168
>RL7_NEUCR (Q7SBD5) 60S ribosomal protein L7| Length = 248 Score = 169 bits (428), Expect = 4e-42 Identities = 84/156 (53%), Positives = 113/156 (72%) Frame = +3 Query: 45 VVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 224 V+VPE++L KRK +E + E R VIF RA+ Y +EY ++E ++L Sbjct: 11 VLVPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRL 70 Query: 225 KREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATIN 404 +R A+ G F++ EAKL+F++RI+GIN + PK +KILQLLRL QI NGVF++V KAT Sbjct: 71 QRAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAE 130 Query: 405 MLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 M++ VEP+VAYGYPNLKSV+ELIYKRGYGK+NKQR+ Sbjct: 131 MIKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRV 166
>RL7_BOVIN (Q58DT1) 60S ribosomal protein L7| Length = 248 Score = 164 bits (415), Expect = 1e-40 Identities = 84/154 (54%), Positives = 105/154 (68%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPE++ KRK RK+I+ +AK Y +EY + +++ R Sbjct: 14 VPETLKKKRKNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 73 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INML Sbjct: 74 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML 133 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 R VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI Sbjct: 134 RIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRI 167
>RL7_MOUSE (P14148) 60S ribosomal protein L7| Length = 270 Score = 163 bits (413), Expect = 2e-40 Identities = 83/154 (53%), Positives = 105/154 (68%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPE++ KR+ RK+I+ +AK Y +EY + +++ R Sbjct: 36 VPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 95 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INML Sbjct: 96 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML 155 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 R VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI Sbjct: 156 RIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRI 189
>RL7_RAT (P05426) 60S ribosomal protein L7| Length = 260 Score = 163 bits (412), Expect = 3e-40 Identities = 82/154 (53%), Positives = 105/154 (68%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPE++ KR+ RK+I+ +AK Y +EY + +++ R Sbjct: 26 VPETLKKKRRNFAELKVKRLRKKFALKTLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 85 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA++NML Sbjct: 86 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASVNML 145 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 R VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI Sbjct: 146 RIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRI 179
>RL7_HUMAN (P18124) 60S ribosomal protein L7| Length = 248 Score = 163 bits (412), Expect = 3e-40 Identities = 83/154 (53%), Positives = 105/154 (68%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPE++ KR+ RK+I+ +AK Y +EY + +++ R Sbjct: 14 VPETLKKKRRNFAELKIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR 73 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 AR G FYV E KL FV+RIRGIN + PK +K+LQLLRLRQIFNG F+K+NKA+INML Sbjct: 74 MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINML 133 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 R VEPY+A+GYPNLKSV ELIYKRGYGK+NK+RI Sbjct: 134 RIVEPYIAWGYPNLKSVNELIYKRGYGKINKKRI 167
>RL7C_SCHPO (O60143) 60S ribosomal protein L7-C| Length = 251 Score = 160 bits (405), Expect = 2e-39 Identities = 81/157 (51%), Positives = 108/157 (68%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 ++ PES+L K+K +E + R++I RA+ Y EY ++E ++ Sbjct: 13 QIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAEREQIE 72 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 L R+AR +G +YV E KL+FV+RIRGIN + PK +KI+QLLRL QI NGVF+K NKAT Sbjct: 73 LGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATK 132 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 ML+ VEPYV YG PNLK+VREL+YKRG+GK+NKQRI Sbjct: 133 EMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRI 169
>RL7_ASHGO (Q755A7) 60S ribosomal protein L7| Length = 243 Score = 159 bits (402), Expect = 4e-39 Identities = 76/157 (48%), Positives = 105/157 (66%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 K++ PES L K K ++ + E R I R Y +EY+ ++ ++Q Sbjct: 4 KILTPESQLKKSKAQQKSAEQVAAERAARKAANKEKRAAILERNAAYHKEYETAERAVIQ 63 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 KREA+ G +YV + KL+FV+RI+GIN + PK +K+LQLLRL QI +GVF+KV KAT Sbjct: 64 AKREAKANGSYYVESQPKLVFVIRIKGINKIAPKPRKVLQLLRLNQINSGVFVKVTKATT 123 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 +LR VEPYVAYGYP+ ++R+L+YKRGYGK+NKQRI Sbjct: 124 ELLRLVEPYVAYGYPSYSTIRQLVYKRGYGKINKQRI 160
>RL7_CAEEL (O01802) 60S ribosomal protein L7| Length = 244 Score = 159 bits (402), Expect = 4e-39 Identities = 79/155 (50%), Positives = 106/155 (68%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPE+VL +RK+ + E + F RA++Y +EY KE ++LKR Sbjct: 10 VPETVLKRRKQRADARTKAAQHKVTVAAKNKEKKTQYFKRAEKYVQEYRNAQKEGLRLKR 69 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 EA KG FYV E K+ FVVRIRGIN +HPK +K LQ+LRLRQI NGVF+K+NKAT+ +L Sbjct: 70 EAEAKGDFYVPAEHKVAFVVRIRGINQLHPKPRKALQILRLRQINNGVFVKLNKATLPLL 129 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 R +EPYVA+GYPN K++ +L+YKRGY K++ R+P Sbjct: 130 RIIEPYVAWGYPNNKTIHDLLYKRGYAKVDGNRVP 164
>RL7_DICDI (P11874) 60S ribosomal protein L7| Length = 245 Score = 159 bits (401), Expect = 6e-39 Identities = 80/155 (51%), Positives = 108/155 (69%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPES+L KR + ++ V F RA++Y EY ++E ++L R Sbjct: 11 VPESILKKRATSQKKAXDVAKLGRAQQLRNSRLNSVYFKRAEKYVSEYHKTEREAIRLNR 70 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 A+ G FYV P AK+ FV+RIRGIN + PK +K+L+LLRL Q+ NGVF+K+NKA+INML Sbjct: 71 IAKNSGTFYVPPAAKVAFVIRIRGINGVSPKPRKVLKLLRLLQLNNGVFVKLNKASINML 130 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 + VEPYVAYG+PNLKS++ELIYKRG+ K++ QRIP Sbjct: 131 KLVEPYVAYGFPNLKSIKELIYKRGHLKIDGQRIP 165
>RL7B_YEAST (Q12213) 60S ribosomal protein L7-B (L6B) (YL8B)| Length = 243 Score = 157 bits (397), Expect = 2e-38 Identities = 71/158 (44%), Positives = 107/158 (67%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 K++ PES L K K ++ + E R +I R Y +EY+ ++ ++Q Sbjct: 4 KILTPESQLKKTKAQQKTAEQIAAERAARKAANKEKRAIILERNAAYQKEYETAERNIIQ 63 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I +G F+KV KAT+ Sbjct: 64 AKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATL 123 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 +L+ +EPYVAYGYP+ ++R+L+YKRG+GK+NKQR+P Sbjct: 124 ELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVP 161
>RL7A_YEAST (P05737) 60S ribosomal protein L7-A (L6A) (YL8A) (RP11)| Length = 243 Score = 157 bits (397), Expect = 2e-38 Identities = 71/158 (44%), Positives = 107/158 (67%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 K++ PES L K K ++ + E R +I R Y +EY+ ++ ++Q Sbjct: 4 KILTPESQLKKSKAQQKTAEQVAAERAARKAANKEKRAIILERNAAYQKEYETAERNIIQ 63 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 KR+A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL +I +G F+KV KAT+ Sbjct: 64 AKRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATL 123 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 +L+ +EPYVAYGYP+ ++R+L+YKRG+GK+NKQR+P Sbjct: 124 ELLKLIEPYVAYGYPSYSTIRQLVYKRGFGKINKQRVP 161
>RL7B_SCHPO (P25457) 60S ribosomal protein L7-B| Length = 250 Score = 156 bits (394), Expect = 4e-38 Identities = 80/157 (50%), Positives = 106/157 (67%) Frame = +3 Query: 45 VVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 224 + PES+L K K ++ + R++I RA+ Y EY A ++E ++L Sbjct: 13 IFAPESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAYEAEYRAAEREQIEL 72 Query: 225 KREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATIN 404 R+AR +G ++V E KL+FVVRIRGIN + PK +KI+QLLRL QI NG+F+K NKA Sbjct: 73 ARKARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKE 132 Query: 405 MLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 ML+ VEPYV YG PN K+VRELIYKRG+GK+NKQRIP Sbjct: 133 MLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIP 169
>RL7_DEBHA (Q6BTA4) 60S ribosomal protein L7| Length = 241 Score = 152 bits (383), Expect = 7e-37 Identities = 71/153 (46%), Positives = 104/153 (67%) Frame = +3 Query: 54 PESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKRE 233 PE+++ K K ++ + E RK+IF RA Y +EY ++ +++ KR+ Sbjct: 7 PETLVKKSKAQQKTAEERAAAKVVRQASNQEKRKIIFDRAAAYQKEYTDAERAVIKAKRD 66 Query: 234 ARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLR 413 A+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI GVF+++ KAT +L+ Sbjct: 67 AKAAGSYYVDAQPKLVFVVRIKGINKIAPKPRKVLQLLRLTQINAGVFVRLTKATSELLK 126 Query: 414 RVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 EPY+AYGYPNL ++R L+YKRG+GK+NKQRI Sbjct: 127 LAEPYIAYGYPNLSTIRHLVYKRGHGKINKQRI 159
>RL7_DROME (P32100) 60S ribosomal protein L7| Length = 252 Score = 152 bits (383), Expect = 7e-37 Identities = 80/155 (51%), Positives = 102/155 (65%) Frame = +3 Query: 51 VPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKR 230 VPES L K++ +K RA++Y EY ++ ++L+R Sbjct: 17 VPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIKLRR 76 Query: 231 EARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINML 410 A+ + FYV EAKL FVVRIRGIN + PK +K+LQL RLRQI NGVF+K+NKATINML Sbjct: 77 LAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINML 136 Query: 411 RRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 R EPY+ +GYPNLKSVRELIYKRG+ K N+QR+P Sbjct: 137 RIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVP 171
>RL7_CANGA (Q6FSN6) 60S ribosomal protein L7| Length = 244 Score = 150 bits (379), Expect = 2e-36 Identities = 73/157 (46%), Positives = 104/157 (66%) Frame = +3 Query: 42 KVVVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQ 221 K++ PES L K K +E + + R I R + +EY+A ++ ++ Sbjct: 5 KILKPESQLKKAKYDEKKSEEFLKARAARRVANKQKRAAILERNAAHQKEYEAAERAVID 64 Query: 222 LKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATI 401 KREA+ G +YV + KL+FVVRI+GIN + PK +K+LQLLRL QI +G F+KV KAT Sbjct: 65 AKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKATS 124 Query: 402 NMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 +L+ +EPYVAYGYP+ +VR+L+YKRG+GK+NKQRI Sbjct: 125 ELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQRI 161
>RL7A_SCHPO (P17937) 60S ribosomal protein L7-A| Length = 249 Score = 142 bits (359), Expect = 4e-34 Identities = 75/153 (49%), Positives = 96/153 (62%) Frame = +3 Query: 54 PESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKRE 233 PE +L KRK E +NRK F RA+ + Y +++E ++L R Sbjct: 15 PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRS 74 Query: 234 ARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLR 413 A+ KG +V E KLLFV+RI G+ M PK +K+L+LLRL +I N VF++ NKA MLR Sbjct: 75 AKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLR 134 Query: 414 RVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 VEPYV YG PNL SVRELIYKRG+GK+N QRI Sbjct: 135 IVEPYVMYGIPNLHSVRELIYKRGFGKINGQRI 167
>RL7L_PONPY (Q5RAH8) Ribosomal protein L7-like 1| Length = 246 Score = 99.8 bits (247), Expect = 4e-21 Identities = 55/156 (35%), Positives = 86/156 (55%) Frame = +3 Query: 48 VVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLK 227 +VPE++L KRK + + + + F R + + + Q +++V+L+ Sbjct: 11 LVPENLLKKRKAYQALKATQAEQALLAKKEQRKGKGLRFKRLESFLHDSWRQKRDMVRLR 70 Query: 228 REARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINM 407 R + + L FVVRI I+ + ++ + LRL++IF+GVF+KV + M Sbjct: 71 RLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKM 130 Query: 408 LRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 LR VEPYV +G+PNLKSVRELI KRG K+ + IP Sbjct: 131 LRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIP 166
>RL7L_HUMAN (Q6DKI1) Ribosomal protein L7-like 1| Length = 246 Score = 97.4 bits (241), Expect = 2e-20 Identities = 55/156 (35%), Positives = 85/156 (54%) Frame = +3 Query: 48 VVPESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLK 227 +VPE++L KRK + + + + F R + + + Q ++ V+L+ Sbjct: 11 LVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQKRDKVRLR 70 Query: 228 REARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINM 407 R + + L FVVRI I+ + ++ + LRL++IF+GVF+KV + M Sbjct: 71 RLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKM 130 Query: 408 LRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRIP 515 LR VEPYV +G+PNLKSVRELI KRG K+ + IP Sbjct: 131 LRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIP 166
>RL7_ENCCU (Q8SS93) 60S ribosomal protein L7| Length = 239 Score = 75.5 bits (184), Expect = 8e-14 Identities = 43/153 (28%), Positives = 82/153 (53%) Frame = +3 Query: 54 PESVLLKRKREELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQLKRE 233 P+S + K++ E + N + ++ +Y Q++E+ L+++ Sbjct: 9 PQSSIRKKEYEARMSRIRSRQEKEFRERKSANARYAEETTEKLLNKYYEQEREI--LEKK 66 Query: 234 ARMKGGFYVSPEAKLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLR 413 + MK GFYV EA+ V+ IR PK +K+L+L RL++I V ++ NK+T ML+ Sbjct: 67 SSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQ 126 Query: 414 RVEPYVAYGYPNLKSVRELIYKRGYGKLNKQRI 512 ++ +VA+G ++ +R+L+Y +G G+ R+ Sbjct: 127 IIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRV 159
>RLP7_KLULA (P32102) Ribosome biogenesis protein RLP7| Length = 318 Score = 67.4 bits (163), Expect = 2e-11 Identities = 41/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 165 ARAKQYAEEYDAQDKELVQLKREARMKGGFYVSPEAKLLFVVRIRGINAMH--PKTKKIL 338 A ++ ++ D +D+E L RE + G E LLFV+R++G A+ K K+L Sbjct: 105 ATSESELQDVDEEDEEDDGLIREKIVYDG-----EPSLLFVIRVKGPTAVKIPAKAYKVL 159 Query: 339 QLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKR 482 LLRL ++ GVF+K+ K +L+ V PY+ G P+L S+R LI KR Sbjct: 160 SLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKR 207
>RLP7_DEBHA (Q6BIF5) Ribosome biogenesis protein RLP7| Length = 275 Score = 66.6 bits (161), Expect = 4e-11 Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 16/159 (10%) Frame = +3 Query: 54 PESVLLKRK---REELWXXXXXXXXXXXXXXSTENRKVIFARAKQYAEEYDAQDKELVQL 224 PE +L KRK R+ L + R F RA+ Y + + E ++ Sbjct: 8 PEILLRKRKNNDRKRLEKQEQARQRQLEQKKKNDQRSKKFVRAETLVSNYKSNELENKRI 67 Query: 225 KREARMKGGFYVSP---------EAKLLFVVRI----RGINAMHPKTKKILQLLRLRQIF 365 K + + AKLLF++RI +G+ + K +K+L LLRL + Sbjct: 68 KHITKFEKQLQADKISQAKEDDESAKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPN 126 Query: 366 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKR 482 GVF+K+ AT+ +L+ + PY+ G P+L S+R+L KR Sbjct: 127 TGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKR 165
>RLP7_YEAST (P40693) Ribosome biogenesis protein RLP7 (Ribosomal protein| L7-like) Length = 322 Score = 62.8 bits (151), Expect = 5e-10 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 2/72 (2%) Frame = +3 Query: 276 LLFVVRIRGINAMHPKTK--KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPN 449 LLF+VR+RG A++ K KIL LLRL + GVF+K+ K +L+ + PYV G P+ Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPS 200 Query: 450 LKSVRELIYKRG 485 L S+R LI KRG Sbjct: 201 LSSIRSLIQKRG 212
>RLP7_CANGA (Q6FS36) Ribosome biogenesis protein RLP7| Length = 317 Score = 62.0 bits (149), Expect = 9e-10 Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 2/74 (2%) Frame = +3 Query: 267 EAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYG 440 E +LLFV+R++G + A P K +IL LRL ++ VF+K+ + T ++L+ + PYV G Sbjct: 133 EEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVG 192 Query: 441 YPNLKSVRELIYKR 482 P+LKS+R LI KR Sbjct: 193 KPSLKSIRSLIQKR 206
>RLP7_ASHGO (Q75ET5) Ribosome biogenesis protein RLP7| Length = 293 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%) Frame = +3 Query: 270 AKLLFVVRIRGINA--MHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGY 443 A LLFVVR+RG A + K ++L LLRL ++ GVF+++ +L+ V PYV G Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGR 169 Query: 444 PNLKSVRELIYKR 482 P+L S+R L+ KR Sbjct: 170 PSLASIRALVQKR 182
>RLP7_PICJA (P32101) Ribosome biogenesis protein RLP7 (Fragment)| Length = 212 Score = 53.9 bits (128), Expect = 3e-07 Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%) Frame = +3 Query: 261 SPEAKLLFVVRIRG-INAMHP-KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVA 434 S + L +VR G + A P K +K+LQLLRL +I +GVF+K+ + +L+ + PY Sbjct: 27 SGKPTLYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTV 86 Query: 435 YGYPNLKSVRELIYKR 482 P+L++VR+L+ KR Sbjct: 87 IXQPSLQTVRQLVQKR 102
>RL30_ARCFU (O28375) 50S ribosomal protein L30P| Length = 152 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/67 (37%), Positives = 41/67 (61%) Frame = +3 Query: 285 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 464 VVR+RG +H K K+ L++LRL + ++ V + + ML+ V+ YVAYG N +++ Sbjct: 4 VVRMRGTVDVHRKIKETLKMLRLHKRYHCVVIPDTPSYRGMLQVVKDYVAYGEINAETLA 63 Query: 465 ELIYKRG 485 L+ RG Sbjct: 64 LLLRLRG 70
>RL30_PYRHO (O59440) 50S ribosomal protein L30P| Length = 155 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +3 Query: 279 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 455 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 456 SVRELIYKRG 485 ++ +LI KRG Sbjct: 63 TLAKLIRKRG 72
>RL30_PYRFU (Q9HH78) 50S ribosomal protein L30P (PfL30)| Length = 155 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +3 Query: 279 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 455 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 456 SVRELIYKRG 485 ++ +LI KRG Sbjct: 63 TLAKLIRKRG 72
>RL30_PYRAB (Q9V1V6) 50S ribosomal protein L30P| Length = 155 Score = 40.4 bits (93), Expect = 0.003 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%) Frame = +3 Query: 279 LFVVRIRG-INAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLK 455 L V+RIRG +N P + L +LRL ++ + V + + + ML++ + Y+ +G N + Sbjct: 4 LAVIRIRGRVNVKRP-VRDTLAMLRLHRVNHCVIVDDTPSYLGMLQKAKDYITWGEINAE 62 Query: 456 SVRELIYKRG 485 ++ +LI KRG Sbjct: 63 TLAKLIRKRG 72
>RL30_METVA (P14035) 50S ribosomal protein L30P| Length = 154 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/74 (31%), Positives = 41/74 (55%) Frame = +3 Query: 285 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 464 VVR+RG + +++LRL ++ + V + N M+++V+ YV YG + +++ Sbjct: 5 VVRVRGSVGVRGDIADTMKMLRLHRVNHCVVIPENDHYTGMIKKVKDYVTYGEIDKETLV 64 Query: 465 ELIYKRGYGKLNKQ 506 LI KRG NK+ Sbjct: 65 SLILKRGRLAGNKR 78
>RL30_AERPE (Q9YF96) 50S ribosomal protein L30P| Length = 162 Score = 39.3 bits (90), Expect = 0.006 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Frame = +3 Query: 276 LLFVVRIRGINAMHPKTKKILQLLRLRQIFNG-VFLKVNKATINMLRRVEPYVAYGYPNL 452 L V+RIRG + P K L LLRLR+ + ++ +MLR VE + YG Sbjct: 6 LYAVIRIRGTVDVPPDIDKTLYLLRLRRRYTASIYHDSLPGLRDMLRTVEAWTTYGEIEE 65 Query: 453 KSVRELIYKRG 485 + + EL+ KRG Sbjct: 66 RVLEELLRKRG 76
>RL30_METTH (O26132) 50S ribosomal protein L30P| Length = 152 Score = 38.5 bits (88), Expect = 0.011 Identities = 18/67 (26%), Positives = 39/67 (58%) Frame = +3 Query: 285 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 464 VVR+RG + +++LRL +I + V ++ + + ML++ + Y+ +G + +++ Sbjct: 4 VVRVRGSAGVRRDIADTMEMLRLNRINHAVLVEDTPSYLGMLQKAKDYITWGEVDQETLT 63 Query: 465 ELIYKRG 485 +I KRG Sbjct: 64 AMIRKRG 70
>RL30_SULSO (Q9UX86) 50S ribosomal protein L30P| Length = 158 Score = 38.1 bits (87), Expect = 0.014 Identities = 22/70 (31%), Positives = 36/70 (51%) Frame = +3 Query: 273 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 452 +LL ++RIRG + L +LRLR FN + + ML +V PY+ +G + Sbjct: 3 ELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDP 62 Query: 453 KSVRELIYKR 482 +++ LI R Sbjct: 63 DTLKLLIINR 72
>RL30_SULAC (O05642) 50S ribosomal protein L30P| Length = 156 Score = 37.7 bits (86), Expect = 0.019 Identities = 23/69 (33%), Positives = 36/69 (52%) Frame = +3 Query: 273 KLLFVVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNL 452 +L+ V+RIRG A + L +LRL+ FN + + + ML V YV +G N Sbjct: 3 ELIGVIRIRGWAATPWYIQDTLSMLRLKNAFNAMIYPKDSSIQGMLNLVSSYVTWGELND 62 Query: 453 KSVRELIYK 479 + +R L+ K Sbjct: 63 EGLRLLVSK 71
>RL30_METJA (P54046) 50S ribosomal protein L30P| Length = 154 Score = 37.7 bits (86), Expect = 0.019 Identities = 24/77 (31%), Positives = 42/77 (54%) Frame = +3 Query: 285 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 464 V+RIRG + L++LRL ++ + V + + ML++V+ YV +G + ++ Sbjct: 5 VIRIRGRVGVRRDIADTLKMLRLHKVNHCVIIPETETFKGMLQKVKDYVTWGEIDKDTLV 64 Query: 465 ELIYKRGYGKLNKQRIP 515 +LI KRG NK+ P Sbjct: 65 KLILKRGRLPGNKKVNP 81
>DPOL_NPVLD (P30318) DNA polymerase (EC 2.7.7.7)| Length = 1014 Score = 31.6 bits (70), Expect = 1.3 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%) Frame = +3 Query: 297 RGINAMHPKTKKILQLLRLRQ-------IFNGVFLKVNKATINMLRRVEPYVAYGYPNL- 452 + +NA++PK K L +R+R +N + K+ N L+R+ + YGY + Sbjct: 579 KNVNAVNPKLLKTLSEMRVRYKGLRDQCEYNSFYYKLYDKIQNALKRIANSI-YGYYGIF 637 Query: 453 -KSVRELIYKRGYGKLNK 503 K + I K G GKL + Sbjct: 638 FKPLANYITKMGRGKLKE 655
>RL30_HALMA (P14121) 50S ribosomal protein L30P (Hmal30) (Hl20) (Hl16)| Length = 154 Score = 31.2 bits (69), Expect = 1.8 Identities = 15/66 (22%), Positives = 35/66 (53%) Frame = +3 Query: 285 VVRIRGINAMHPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYPNLKSVR 464 +V++RG MH + L++L + + + + A M+ +V +VA+G P+ +++ Sbjct: 4 LVQLRGEVNMHTDIQDTLEMLNIHHVNHCTLVPETDAYRGMVAKVNDFVAFGEPSQETLE 63 Query: 465 ELIYKR 482 ++ R Sbjct: 64 TVLATR 69
>AX22B_PHAAU (P32294) Auxin-induced protein 22B (Indole-3-acetic acid-induced| protein ARG4) Length = 196 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = +3 Query: 366 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 506 +G+F+KV+ LR+V+ V GYP L E ++K G+ +++ Sbjct: 98 DGIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFKLAIGEYSER 144
>POL_CAMVD (P03556) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 674 Score = 30.0 bits (66), Expect = 3.9 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 17/104 (16%) Frame = +3 Query: 186 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGIN------AMH 317 EE+D Q KEL+ LK + M F V+ EA K VV + +N A + Sbjct: 255 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYN 314 Query: 318 PKTK-KILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 446 P K ++L L+R ++IF+ K + + + P A+ P Sbjct: 315 PPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 358
>AX22D_PHAAU (O24542) Auxin-induced protein 22D (Indole-3-acetic acid-induced| protein ARG13) Length = 193 Score = 29.6 bits (65), Expect = 5.1 Identities = 14/47 (29%), Positives = 28/47 (59%) Frame = +3 Query: 366 NGVFLKVNKATINMLRRVEPYVAYGYPNLKSVRELIYKRGYGKLNKQ 506 NG+++KV+ A LR+++ V YP L E ++K +G+ +++ Sbjct: 96 NGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCIFGEYSER 142
>NUD17_HUMAN (P0C025) Putative nucleoside diphosphate-linked moiety X motif 17,| mitochondrial precursor (EC 3.6.1.-) (Nudix motif 17) Length = 295 Score = 29.6 bits (65), Expect = 5.1 Identities = 24/63 (38%), Positives = 29/63 (46%), Gaps = 7/63 (11%) Frame = -3 Query: 485 TSLVDQLPHTLQVRVPICNIWLDPAEHV-------DGGLVNLEEHSIEYLSQTQKLEDLL 327 T L+ + TL V N+W+ P HV DGGL L E S +L Q Q L Sbjct: 105 TVLLTRRARTLSVSP---NLWVPPGGHVELEEELLDGGLRELWEESGLHLPQGQFSWVPL 161 Query: 326 GLW 318 GLW Sbjct: 162 GLW 164
>NU5M_STRPU (P15552) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 637 Score = 29.3 bits (64), Expect = 6.7 Identities = 18/43 (41%), Positives = 26/43 (60%) Frame = -1 Query: 430 TYGSTLRSMLMVALLTLRNTPLNICLKRKSWRIFLVFGCMALI 302 T ++++S+ + L L NTPLNI L + FLVF +ALI Sbjct: 85 TCNNSIQSINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALI 127
>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein| p162) (Zinc finger FYVE domain-containing protein 2) Length = 1411 Score = 29.3 bits (64), Expect = 6.7 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%) Frame = -3 Query: 488 ITSLVDQLPHTLQVRVPICNIWLDPAEHVDGGLVNLEEHSIEYLSQTQKLEDLLG----L 321 IT+ +DQ+ LQ D EH +L+E+ +YLS QK E+L G L Sbjct: 686 ITTQLDQVTAKLQ----------DKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKL 735 Query: 320 WVHGIDTSDS------DNKQQLSLRTDIE 252 ++ S D +QQ L TD+E Sbjct: 736 EADSLEVKASKEQALQDLQQQRQLNTDLE 764
>POL_CAMVS (P03554) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 679 Score = 28.9 bits (63), Expect = 8.7 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = +3 Query: 186 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 317 EE+D Q KEL+ LK + M F V+ EA K VV + +N Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATVGDAYN 319 Query: 318 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 446 P ++L L+R ++IF+ K + + + P A+ P Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363
>POL_CAMVE (Q02964) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 679 Score = 28.9 bits (63), Expect = 8.7 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = +3 Query: 186 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 317 EE+D Q KEL+ LK + M F V+ EA K VV + +N Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYN 319 Query: 318 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 446 P ++L L+R ++IF+ K + + + P A+ P Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363
>POL_CAMVC (P03555) Enzymatic polyprotein [Contains: Aspartic protease (EC| 3.4.23.-); Endonuclease; Reverse transcriptase (EC 2.7.7.49)] Length = 679 Score = 28.9 bits (63), Expect = 8.7 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Frame = +3 Query: 186 EEYDAQDKELVQLK-----REARMKGGFYVSPEA-----KLLFVVRIRGINAMH------ 317 EE+D Q KEL+ LK + M F V+ EA K VV + +N Sbjct: 260 EEFDKQIKELLDLKVIKPSKSPHMAPAFLVNNEAEKRRGKKRMVVNYKAMNKATIGDAYN 319 Query: 318 -PKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVAYGYP 446 P ++L L+R ++IF+ K + + + P A+ P Sbjct: 320 LPNKDELLTLIRGKKIFSSFDCKSGFWQVLLDQESRPLTAFTCP 363 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,650,190 Number of Sequences: 219361 Number of extensions: 958541 Number of successful extensions: 3144 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3139 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
