ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30f17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein 1316 0.0
2emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; c... 188 2e-44
3gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence 117 5e-23
4gb|AY109619.1| Zea mays CL9605_1 mRNA sequence 117 5e-23
5gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.59
6gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbh... 42 2.3
7gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete seq... 42 2.3
8emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in... 42 2.3
9emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial 42 2.3
10ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation facto... 40 9.3
11gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 9.3
12ref|XM_369803.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.3
13ref|XM_421760.1| PREDICTED: Gallus gallus transcription factor T... 40 9.3
14gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosom... 40 9.3
15gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
16gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 9.3
17gb|AE009952.1| Yersinia pestis KIM, complete genome 40 9.3
18gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosom... 40 9.3
19ref|XM_802673.1| Trypanosoma cruzi strain CL Brener DNA excision... 40 9.3
20ref|XM_813897.1| Trypanosoma cruzi strain CL Brener cyclin (Tc00... 40 9.3
21emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chr... 40 9.3
22emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gen... 40 9.3
23emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and parti... 40 9.3
24emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 9.3
25emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 9.3
26emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; seg... 40 9.3
27gb|AY113531.1| Drosophila melanogaster RE60835 full insert cDNA 40 9.3
28ref|NM_135833.2| Drosophila melanogaster CG16865-RA (CG16865), mRNA 40 9.3
29gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds 40 9.3
30gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, r... 40 9.3
31gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, r... 40 9.3
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
33gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561... 40 9.3
34gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK ge... 40 9.3
35gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50... 40 9.3
36gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosom... 40 9.3

>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein
          Length = 1892

 Score = 1316 bits (664), Expect = 0.0
 Identities = 673/676 (99%)
 Strand = Plus / Plus

                                                                        
Query: 4    tggccacctcggcatacggtccaattgtcttcaacctcgaccttcatgacggcactcgcg 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 1155 tggccacctcggcatacggtccaattgtcttcaacctcgaccttcatgacggcaactgcg 1214

                                                                        
Query: 64   ggcaagccgacgaggaggaggatgaaaagaacaccgggaggatagtgtgcgacgccattg 123
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 ggcaagccgacgaggaggaggatgaaaagaacaccgggaggatagtgtgcgacgccattg 1274

                                                                        
Query: 124  gcggcgacttctccaactataataaggccatatcagagactgtcctcacacgctgcggcc 183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 gcggcgacttctccaactataataaggccatatcagagactgtcctcacacgctgcggcc 1334

                                                                        
Query: 184  ccgcggaggtgatctacgcagttctaagcaacggcgtccaaggccgggtcgatgtgaagc 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 ccgcggaggtgatctacgcagttctaagcaacggcgtccaaggccgggtcgatgtgaagc 1394

                                                                        
Query: 244  ttgctggcctgcagtcccgagacgaagtggttctcgtcggcaggatcgttgctcgcagca 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 ttgctggcctgcagtcccgagacgaagtggttctcgtcggcaggatcgttgctcgcagca 1454

                                                                        
Query: 304  agctgttcgatttcggctgtgtgctcttctacaacgaggccgctggagtgcgcgtgcgac 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 agctgttcgatttcggctgtgtgctcttctacaacgaggccgctggagtgcgcgtgcgac 1514

                                                                        
Query: 364  ctggggagctggtccccttggcgaggcatgcgcttgccgtgccgctgcacatgccgctca 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1515 ctggggagctggtccccttggcgaggcatgcgcttgccgtgccgctgcacatgccgctca 1574

                                                                        
Query: 424  cgattgagcttgacattcgtcatggtggatccggagatgaaattgttagaggcgagcttg 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1575 cgattgagcttgacattcgtcatggtggatccggagatgaaattgttagaggcgagcttg 1634

                                                                        
Query: 484  agttcaaaactgccatcgacggcctccatacaggacgtcttgttggtgtcaatgatgctg 543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1635 agttcaaaactgccatcgacggcctccatacaggacgtcttgttggtgtcaatgatgctg 1694

                                                                        
Query: 544  aattcgaggtgacaatcttatggtcggagtacccttggtagacacccatgtgagcgagcg 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1695 aattcgaggtgacaatcttatggtcggagtacccttggtagacacccatgtgagcgagcg 1754

                                                                        
Query: 604  gactactatcaactacaaatactatatggaactcagtacgagttgaaaaataagtgtctt 663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1755 gactactatcaactacaaatactatatggaactcagtacgagttgaaaaataagtgtctt 1814

                            
Query: 664  tccttgacacatacca 679
            ||||||||||||||||
Sbjct: 1815 tccttgacacatacca 1830



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>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni
          Length = 328

 Score =  188 bits (95), Expect = 2e-44
 Identities = 208/245 (84%), Gaps = 13/245 (5%)
 Strand = Plus / Minus

                                                                       
Query: 2   ggtggccacctcggcatacggtccaattgtcttcaacctcgaccttcatgacggcactcg 61
           ||||| ||||||||||||| ||||||||||||||| ||||||||| |||||||       
Sbjct: 239 ggtggtcacctcggcatacagtccaattgtcttcagcctcgacctccatgacg------- 187

                                                                       
Query: 62  cgggcaagccgacgaggaggaggatgaaaagaacaccgggaggatagtgtgcgacgccat 121
             | |||||||||||||||||||| ||   |||||||| ||||||||| |||||| ||||
Sbjct: 186 --gacaagccgacgaggaggaggaaga---gaacaccgcgaggatagtctgcgacaccat 132

                                                                       
Query: 122 tggcggcgacttctccaactataataaggccatatcagagactgt-cctcacacgctgcg 180
           ||||||||||||||| ||||| || | ||||||||| |||||||| |  |||| |||  |
Sbjct: 131 tggcggcgacttctctaactacaacagggccatatcggagactgtacggcacaggctatg 72

                                                                       
Query: 181 gccccgcggaggtgatctacgcagttctaagcaacggcgtccaaggccgggtcgatgtga 240
           |||||||||||||||||||||| || |||||||| ||| |||||||||||||||| ||||
Sbjct: 71  gccccgcggaggtgatctacgccgtcctaagcaatggcatccaaggccgggtcgacgtga 12

                
Query: 241 agctt 245
           |||||
Sbjct: 11  agctt 7



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>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence
          Length = 1034

 Score =  117 bits (59), Expect = 5e-23
 Identities = 136/161 (84%), Gaps = 3/161 (1%)
 Strand = Plus / Plus

                                                                       
Query: 280 tcggcaggatcgttgctcgcagcaagctgttcgatttcggctgtgtgctcttctacaacg 339
           |||| |||||||||||||||||||||||||| ||  | ||||| |||||||||||||| |
Sbjct: 546 tcgggaggatcgttgctcgcagcaagctgtttgacgttggctgcgtgctcttctacaaag 605

                                                                       
Query: 340 aggccgc---tggagtgcgcgtgcgacctggggagctggtccccttggcgaggcatgcgc 396
           |||  |    |||||||  ||||||||| |||| |||||| |  ||||||||| | || |
Sbjct: 606 agggtgacaatggagtgaacgtgcgaccgggggggctggttcagttggcgagggaagcac 665

                                                    
Query: 397 ttgccgtgccgctgcacatgccgctcacgattgagcttgac 437
           | ||||||||||||||||||||||| |||||||||||||||
Sbjct: 666 tcgccgtgccgctgcacatgccgctgacgattgagcttgac 706



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 112/137 (81%)
 Strand = Plus / Plus

                                                                       
Query: 98  cgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggccatatc 157
           |||||||||| | ||||||  ||| ||||| |||||||||||||| || | |||||||  
Sbjct: 349 cgggaggataatctgcgactgcatcggcggagacttctccaactacaacagggccatagt 408

                                                                       
Query: 158 agagactgtcctcacacgctgcggccccgcggaggtgatctacgcagttctaagcaacgg 217
            ||||||||||  ||  |||  ||||| || || |||||||| || || || ||||||||
Sbjct: 409 cgagactgtccaaacgggctatggccctgctgaagtgatctatgccgtcctgagcaacgg 468

                            
Query: 218 cgtccaaggccgggtcg 234
           |||||||||||||||||
Sbjct: 469 cgtccaaggccgggtcg 485



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>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence
          Length = 1251

 Score =  117 bits (59), Expect = 5e-23
 Identities = 241/302 (79%), Gaps = 6/302 (1%)
 Strand = Plus / Minus

                                                                       
Query: 285 aggatcgttgctcgcagcaagctgttcgatttcggctgtgtgctcttctacaacgaggcc 344
           |||||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||  
Sbjct: 467 aggatcgttgctcgcagcaagctgttcgacgtcggctgcgtgctcttctacaaagagggt 408

                                                                       
Query: 345 gc---tggagtgcgcgtgcgacctggggagctggtccccttggcgaggcatgcgcttgcc 401
           |    |||||||  |||||||||     ||||| | |  ||||||||| | ||||| |||
Sbjct: 407 gacaatggagtgaacgtgcgaccnnnnnagctgattcagttggcgagggaagcgctcgcc 348

                                                                       
Query: 402 gtgccgctgcacatgccgctcacgattgagcttgacattcgtcatggtggatccggagat 461
           |||||||||||||||||||| ||||||||||||||| | | ||   ||   ||||| |||
Sbjct: 347 gtgccgctgcacatgccgctgacgattgagcttgacctgcatcgctgt---tccggcgat 291

                                                                       
Query: 462 gaaattgttagaggcgagcttgagttcaaaactgccatcgacggcctccatacaggacgt 521
           ||||||||| |||| |  |||||||||||  |||| | | ||||||  || || | ||| 
Sbjct: 290 gaaattgttggaggggtccttgagttcaatcctgcgaccaacggccagcacacggaacga 231

                                                                       
Query: 522 cttgttggtgtcaatgatgctgaattcgaggtgacaatcttatggtcggagtacccttgg 581
           |||||||| |  ||||  |||||||| || ||| |||| | ||||||| |||||||||||
Sbjct: 230 cttgttggagaaaatggcgctgaattggaagtggcaatttcatggtcgcagtacccttgg 171

             
Query: 582 ta 583
           ||
Sbjct: 170 ta 169



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 113/137 (82%)
 Strand = Plus / Minus

                                                                       
Query: 98  cgggaggatagtgtgcgacgccattggcggcgacttctccaactataataaggccatatc 157
           |||||||||| | ||||||  ||| |||| ||||||||||||||| || | |||||||  
Sbjct: 669 cgggaggatactctgcgactgcatcggcgacgacttctccaactacaacagggccatagt 610

                                                                       
Query: 158 agagactgtcctcacacgctgcggccccgcggaggtgatctacgcagttctaagcaacgg 217
            ||||||||||  ||  |||  |||||||| || |||||||| || || || ||||||||
Sbjct: 609 cgagactgtccaaacgggctatggccccgctgaagtgatctatgccgtcctgagcaacgg 550

                            
Query: 218 cgtccaaggccgggtcg 234
           |||||||||||||||||
Sbjct: 549 cgtccaaggccgggtcg 533



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 4   tggccacctcggcatacggtccaattgtcttcaacctcgaccttcatgacggca 57
           ||||||||||||||||| ||||||||| ||||| | || |||| ||||| ||||
Sbjct: 763 tggccacctcggcatacagtccaattgccttcaccttctacctccatgatggca 710



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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 393     gcgcttgccgtgccgctgcaca 414
               ||||||||||||||||||||||
Sbjct: 1043232 gcgcttgccgtgccgctgcaca 1043253



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>gb|AY135660.1| Aquifex pyrophilus hydrogenase small subunit (mbhS1) gene, partial
            cds; and hypothetical protein, phosphatidate
            cytidylytransferase (cds), undecaprenyl pyrophosphate
            (yaes), hypothetical protein,
            3-deoxy-D-manno-2-octulosonate-8-phosphate synthase
            (kdsA), molybdenum transport system permease (modB),
            riboflavin synthase beta subunit (ribH), transcription
            termination factor (nusB), hypothetical protein, NADH
            dehydrogenase (nuo), cytochrome c peroxidase (ccpR), heat
            shock protein 70 (dnaK), and hypothetical protein genes,
            complete cds
          Length = 12698

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 263  agacgaagtggttctcgtcgg 283
            |||||||||||||||||||||
Sbjct: 9750 agacgaagtggttctcgtcgg 9770



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>gb|AC144728.11| Medicago truncatula clone mth2-6g7, complete sequence
          Length = 105161

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    cgaggaggaggatgaaaagaa 94
             |||||||||||||||||||||
Sbjct: 79209 cgaggaggaggatgaaaagaa 79189



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>emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in linkage group 5,
             complete sequence
          Length = 149707

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   tgtctttccttgacacatacc 678
             |||||||||||||||||||||
Sbjct: 27363 tgtctttccttgacacatacc 27383



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>emb|AJ005800.1|APH5800 Aquifex pyrophilus dnaK gene, partial
          Length = 1820

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 263  agacgaagtggttctcgtcgg 283
            |||||||||||||||||||||
Sbjct: 1011 agacgaagtggttctcgtcgg 1031



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>ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation factor-like protein
           (DDB0229377), partial mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 605 actactatcaactacaaata 624
           ||||||||||||||||||||
Sbjct: 222 actactatcaactacaaata 203



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>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the
              complete genome
          Length = 290393

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    catgccgctcacgattgagc 432
              ||||||||||||||||||||
Sbjct: 215780 catgccgctcacgattgagc 215761



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>ref|XM_369803.1| Magnaporthe grisea 70-15 hypothetical protein (MG06318.4) partial
           mRNA
          Length = 3699

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 69  gccgacgaggaggaggatga 88
           ||||||||||||||||||||
Sbjct: 964 gccgacgaggaggaggatga 983



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>ref|XM_421760.1| PREDICTED: Gallus gallus transcription factor Tcf4 (TCF4), mRNA
          Length = 4491

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   cgacgaggaggaggatgaaaagaa 94
            ||||||||||||||| ||||||||
Sbjct: 4002 cgacgaggaggaggaggaaaagaa 3979



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>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence
          Length = 211002

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    tgcgacctggggagctggtc 377
              ||||||||||||||||||||
Sbjct: 153219 tgcgacctggggagctggtc 153238



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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    gctgtgtgctcttctacaac 338
              ||||||||||||||||||||
Sbjct: 159160 gctgtgtgctcttctacaac 159141



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 388     ggcatgcgcttgccgtgccgctgc 411
               |||| |||||||||||||||||||
Sbjct: 2556802 ggcacgcgcttgccgtgccgctgc 2556779



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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 413     catgccgctcacgattgagc 432
               ||||||||||||||||||||
Sbjct: 3650794 catgccgctcacgattgagc 3650813



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>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete
             sequence
          Length = 178757

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   tgcgacctggggagctggtc 377
             ||||||||||||||||||||
Sbjct: 51079 tgcgacctggggagctggtc 51098



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>ref|XM_802673.1| Trypanosoma cruzi strain CL Brener DNA excision repair protein
            (Tc00.1047053508675.20) partial mRNA
          Length = 3357

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   cgacgaggaggaggatgaaa 90
            ||||||||||||||||||||
Sbjct: 2301 cgacgaggaggaggatgaaa 2320



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>ref|XM_813897.1| Trypanosoma cruzi strain CL Brener cyclin (Tc00.1047053506945.270)
           partial mRNA
          Length = 636

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 79  aggaggatgaaaagaacacc 98
           ||||||||||||||||||||
Sbjct: 590 aggaggatgaaaagaacacc 609



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>emb|AL158046.12| Human DNA sequence from clone RP5-1092K5 on chromosome 10 Contains part
             of the gene for a novel protein (KIAA1617) and a
             cytochrome c oxidase subunit VIc (COX6) pseudogene,
             complete sequence
          Length = 119265

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aggaggaggatgaaaagaac 95
             ||||||||||||||||||||
Sbjct: 12194 aggaggaggatgaaaagaac 12175



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>emb|Y16952.3|AME16952 Amycolatopsis balhimycina biosynthetic gene cluster for balhimycin,
             strain DSM 5908
          Length = 66669

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 179   cggccccgcggaggtgatctacgc 202
             |||||||||||| |||||||||||
Sbjct: 44569 cggccccgcggacgtgatctacgc 44592



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>emb|Y14649.1|RLDNAKJ Rhizobium leguminosarum dnaK gene and partial dnaJ gene
          Length = 2934

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  gacgaagtggttctcgtcgg 283
            ||||||||||||||||||||
Sbjct: 1217 gacgaagtggttctcgtcgg 1236



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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 298    gcagcaagctgttcgatttc 317
              ||||||||||||||||||||
Sbjct: 250373 gcagcaagctgttcgatttc 250392



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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 413     catgccgctcacgattgagc 432
               ||||||||||||||||||||
Sbjct: 3768499 catgccgctcacgattgagc 3768518



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>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20
          Length = 208050

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    catgccgctcacgattgagc 432
              ||||||||||||||||||||
Sbjct: 111725 catgccgctcacgattgagc 111744



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>gb|AY113531.1| Drosophila melanogaster RE60835 full insert cDNA
          Length = 925

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  cgacgaggaggaggatgaaa 90
           ||||||||||||||||||||
Sbjct: 680 cgacgaggaggaggatgaaa 699



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>ref|NM_135833.2| Drosophila melanogaster CG16865-RA (CG16865), mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  cgacgaggaggaggatgaaa 90
           ||||||||||||||||||||
Sbjct: 680 cgacgaggaggaggatgaaa 699



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>gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds
          Length = 2266

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 511  atacaggacgtcttgttggt 530
            ||||||||||||||||||||
Sbjct: 1251 atacaggacgtcttgttggt 1270



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>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
              BACR30I21, complete sequence
          Length = 161682

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     cgacgaggaggaggatgaaa 90
              ||||||||||||||||||||
Sbjct: 142321 cgacgaggaggaggatgaaa 142340



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>gb|AC092223.1|AC092223 Drosophila melanogaster, chromosome 2L, region 34D-35X, BAC clone
            BACR16P12, complete sequence
          Length = 171598

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   cgacgaggaggaggatgaaa 90
            ||||||||||||||||||||
Sbjct: 9464 cgacgaggaggaggatgaaa 9483



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 319      gctgtgtgctcttctacaac 338
                ||||||||||||||||||||
Sbjct: 24090671 gctgtgtgctcttctacaac 24090652



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>gb|AC008744.6|AC008744 Homo sapiens chromosome 19 clone CTD-2561O20, complete sequence
          Length = 203200

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    gaagcttgctggcctgcagt 258
              ||||||||||||||||||||
Sbjct: 104364 gaagcttgctggcctgcagt 104383



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>gb|AY752744.1| Rhizobium leguminosarum strain ATCC 10004 DnaK gene, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  gacgaagtggttctcgtcgg 283
            ||||||||||||||||||||
Sbjct: 988  gacgaagtggttctcgtcgg 1007



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>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
              sequence
          Length = 304772

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     cgacgaggaggaggatgaaa 90
              ||||||||||||||||||||
Sbjct: 158836 cgacgaggaggaggatgaaa 158855



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>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete
             sequence
          Length = 186404

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   tgcgacctggggagctggtc 377
             ||||||||||||||||||||
Sbjct: 35455 tgcgacctggggagctggtc 35474


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,722,632
Number of Sequences: 3902068
Number of extensions: 4722632
Number of successful extensions: 90351
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90081
Number of HSP's gapped (non-prelim): 265
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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