ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_185175.1| Oryza sativa (japonica cultivar-group), mRNA 371 1e-99
2dbj|AK101126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 3e-97
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 343 3e-91
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 343 3e-91
5gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 343 3e-91
6gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 343 3e-91
7ref|XM_477086.1| Oryza sativa (japonica cultivar-group), mRNA 186 4e-44
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 186 4e-44
9dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic D... 186 4e-44
10dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic D... 186 4e-44
11dbj|AK109769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
12gb|AY112440.1| Zea mays CL20332_1 mRNA sequence 180 3e-42
13ref|XM_315066.2| Anopheles gambiae str. PEST ENSANGP00000011443 ... 52 0.002
14emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, ... 46 0.099
15emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome 4, BA... 46 0.099
16emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19... 46 0.099
17emb|AJ970220.1| Aedes aegypti retroposon Juan-A 35 Ae aeg, clone 6 44 0.39
18ref|XM_779528.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.39
19gb|BC088917.1| Xenopus laevis hypothetical LOC496326, mRNA (cDNA... 44 0.39
20emb|AL158071.23| Human DNA sequence from clone RP11-305L7 on chr... 42 1.5
21gb|AC182736.3| Pan troglodytes BAC clone CH251-15A9 from chromos... 42 1.5
22gb|DQ145275.1| Drosophila miranda neo-Y Tsf3 gene, partial sequence 40 6.1
23gb|AC129573.16| Mus musculus chromosome 6, clone RP23-457B5, com... 40 6.1
24gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete s... 40 6.1
25emb|AL449344.5| Human DNA sequence from clone RP11-280L17 on chr... 40 6.1
26emb|AL121906.18|HSDJ63M2 Human DNA sequence from clone RP1-63M2 ... 40 6.1
27gb|AC122546.14| Mus musculus chromosome 5, clone RP23-408A1, com... 40 6.1
28gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, compl... 40 6.1
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Canc... 40 6.1
31gb|AC009313.4| Homo sapiens BAC clone RP11-440P12 from 2, comple... 40 6.1
32gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, comp... 40 6.1
33dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
34gb|L12401.1|HUMLAMIN03 Human nuclear lamin A and nuclear lamin C... 40 6.1
35dbj|AK102504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
36dbj|AK063853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
37emb|AL513424.3|HS109M15 Homo sapiens chromosome 9 BAC RP11-109M1... 40 6.1

>ref|NM_185175.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1335

 Score =  371 bits (187), Expect = 1e-99
 Identities = 373/435 (85%)
 Strand = Plus / Plus

                                                                        
Query: 11   gtgaagattctgatttcactttcccagttcgttttaatctcagagatcacacaatctatg 70
            ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 833  gtgaagattctgacttcacattcccagttcattttaatctcagagagcacacaatctatg 892

                                                                        
Query: 71   tacggtgtcgtccatatctgaaagacttcctggagagagtagccagcatgtttgagataa 130
            | || || ||||||||||||||||| ||| |||||| |||||| |||||||||||||| |
Sbjct: 893  tgcgttgccgtccatatctgaaagagttcttggagacagtagcaagcatgtttgagatca 952

                                                                        
Query: 131  tcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgttcttgatccga 190
            |||| ||||| |||||||||||||| ||||||||||| || |||||| |||||||||| |
Sbjct: 953  tcattttcacagctagtcaaagtatttatgcagaacagctacttaatattcttgatccta 1012

                                                                        
Query: 191  aaagaaggttgttccgtcatcgagtttatcgcgagtcttgcgtctacgtggagggcaact 250
            |||| ||||||||||| ||||||||||| |||||||| ||  |||  |||||||| ||||
Sbjct: 1013 aaaggaggttgttccgccatcgagtttaccgcgagtcctgtctctttgtggagggaaact 1072

                                                                        
Query: 251  acttaaaggatctatcagttctcggacgtgacttgtctcgtgttgtcatagttgacaatt 310
            |||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 1073 acttaaaggatctatcagttcttggacgtgacttggctcgtgtggtcattgttgataatt 1132

                                                                        
Query: 311  ctccacaggcctttgggttccagttggacaatggcataccgatcgagagttggttcgacg 370
            | |||||||||||||||||||| || ||||| ||| | || || || |||||||| || |
Sbjct: 1133 caccacaggcctttgggttccaattagacaacggcgtccctattgaaagttggtttgatg 1192

                                                                        
Query: 371  acccaaacgacaaggagctcctagcactgctaccgttcctggaaagcctggttggtgtgg 430
            | |  || ||||  || |||||| || | || || ||  || ||||  ||||||| ||||
Sbjct: 1193 atcgtaatgacagagaactcctaacattacttccatttttgcaaagtttggttggggtgg 1252

                           
Query: 431  aagatgtccggccat 445
            |||||||||||||||
Sbjct: 1253 aagatgtccggccat 1267



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>dbj|AK101126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025N10, full
            insert sequence
          Length = 1947

 Score =  363 bits (183), Expect = 3e-97
 Identities = 372/435 (85%)
 Strand = Plus / Plus

                                                                        
Query: 11   gtgaagattctgatttcactttcccagttcgttttaatctcagagatcacacaatctatg 70
            ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 1092 gtgaagattctgacttcacattcccagttcattttaatctcagagagcacacaatctatg 1151

                                                                        
Query: 71   tacggtgtcgtccatatctgaaagacttcctggagagagtagccagcatgtttgagataa 130
            | || || ||||||||||||||||| ||| |||||| |||||| |||||||||||||| |
Sbjct: 1152 tgcgttgccgtccatatctgaaagagttcttggagacagtagcaagcatgtttgagatca 1211

                                                                        
Query: 131  tcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgttcttgatccga 190
            |||| ||||| |||||||||||||| ||||||||||| || |||||| |||||||||| |
Sbjct: 1212 tcattttcacagctagtcaaagtatttatgcagaacagctacttaatattcttgatccta 1271

                                                                        
Query: 191  aaagaaggttgttccgtcatcgagtttatcgcgagtcttgcgtctacgtggagggcaact 250
            |||| ||||||||||| ||||||||||| |||||||| ||  |||  |||||||| ||||
Sbjct: 1272 aaaggaggttgttccgccatcgagtttaccgcgagtcctgtctctttgtggagggaaact 1331

                                                                        
Query: 251  acttaaaggatctatcagttctcggacgtgacttgtctcgtgttgtcatagttgacaatt 310
            |||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 1332 acttaaaggatctatcagttcttggacgtgacttggctcgtgtggtcattgttgataatt 1391

                                                                        
Query: 311  ctccacaggcctttgggttccagttggacaatggcataccgatcgagagttggttcgacg 370
            | | |||||||||||||||||| || ||||| ||| | || || || |||||||| || |
Sbjct: 1392 cacaacaggcctttgggttccaattagacaacggcgtccctattgaaagttggtttgatg 1451

                                                                        
Query: 371  acccaaacgacaaggagctcctagcactgctaccgttcctggaaagcctggttggtgtgg 430
            | |  || ||||  || |||||| || | || || ||  || ||||  ||||||| ||||
Sbjct: 1452 atcgtaatgacagagaactcctaacattacttccatttttgcaaagtttggttggggtgg 1511

                           
Query: 431  aagatgtccggccat 445
            |||||||||||||||
Sbjct: 1512 aagatgtccggccat 1526



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Minus

                                                                            
Query: 11       gtgaagattctgatttcactttcccagttcgttttaatctcagagatcacacaatctatg 70
                ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 35470690 gtgaagattctgacttcacattcccagttcattttaatctcagagagcacacaatctatg 35470631

                                                                            
Query: 71       tacggtgtcgtccatatctgaaagacttcctggagagagtagccagcatgtttgagataa 130
                | || || ||||||||||||||||| ||| |||||| |||||| |||||||||||||| |
Sbjct: 35470630 tgcgttgccgtccatatctgaaagagttcttggagacagtagcaagcatgtttgagatca 35470571

                                                                            
Query: 131      tcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgttcttgatccga 190
                |||| ||||| |||||||||||||| ||||||||||| || |||||| |||||||||| |
Sbjct: 35470570 tcattttcacagctagtcaaagtatttatgcagaacagctacttaatattcttgatccta 35470511

                                                                            
Query: 191      aaagaaggttgttccgtcatcgagtttatcgcgagtcttgcgtctacgtggagggcaact 250
                |||| ||||||||||| ||||||||||| |||||||| ||  |||  |||||||| ||||
Sbjct: 35470510 aaaggaggttgttccgccatcgagtttaccgcgagtcctgtctctttgtggagggaaact 35470451

                                                                            
Query: 251      acttaaaggatctatcagttctcggacgtgacttgtctcgtgttgtcatagttgacaatt 310
                |||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 35470450 acttaaaggatctatcagttcttggacgtgacttggctcgtgtggtcattgttgataatt 35470391

                         
Query: 311      ctccacagg 319
                | |||||||
Sbjct: 35470390 caccacagg 35470382



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 419      tggttggtgtggaagatgtccggccat 445
                ||||||| |||||||||||||||||||
Sbjct: 35469261 tggttggggtggaagatgtccggccat 35469235



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Minus

                                                                            
Query: 11       gtgaagattctgatttcactttcccagttcgttttaatctcagagatcacacaatctatg 70
                ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 35560762 gtgaagattctgacttcacattcccagttcattttaatctcagagagcacacaatctatg 35560703

                                                                            
Query: 71       tacggtgtcgtccatatctgaaagacttcctggagagagtagccagcatgtttgagataa 130
                | || || ||||||||||||||||| ||| |||||| |||||| |||||||||||||| |
Sbjct: 35560702 tgcgttgccgtccatatctgaaagagttcttggagacagtagcaagcatgtttgagatca 35560643

                                                                            
Query: 131      tcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgttcttgatccga 190
                |||| ||||| |||||||||||||| ||||||||||| || |||||| |||||||||| |
Sbjct: 35560642 tcattttcacagctagtcaaagtatttatgcagaacagctacttaatattcttgatccta 35560583

                                                                            
Query: 191      aaagaaggttgttccgtcatcgagtttatcgcgagtcttgcgtctacgtggagggcaact 250
                |||| ||||||||||| ||||||||||| |||||||| ||  |||  |||||||| ||||
Sbjct: 35560582 aaaggaggttgttccgccatcgagtttaccgcgagtcctgtctctttgtggagggaaact 35560523

                                                                            
Query: 251      acttaaaggatctatcagttctcggacgtgacttgtctcgtgttgtcatagttgacaatt 310
                |||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 35560522 acttaaaggatctatcagttcttggacgtgacttggctcgtgtggtcattgttgataatt 35560463

                         
Query: 311      ctccacagg 319
                | |||||||
Sbjct: 35560462 caccacagg 35560454



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 419      tggttggtgtggaagatgtccggccat 445
                ||||||| |||||||||||||||||||
Sbjct: 35559333 tggttggggtggaagatgtccggccat 35559307



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>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
             sequence
          Length = 133846

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Plus

                                                                         
Query: 11    gtgaagattctgatttcactttcccagttcgttttaatctcagagatcacacaatctatg 70
             ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 16936 gtgaagattctgacttcacattcccagttcattttaatctcagagagcacacaatctatg 16995

                                                                         
Query: 71    tacggtgtcgtccatatctgaaagacttcctggagagagtagccagcatgtttgagataa 130
             | || || ||||||||||||||||| ||| |||||| |||||| |||||||||||||| |
Sbjct: 16996 tgcgttgccgtccatatctgaaagagttcttggagacagtagcaagcatgtttgagatca 17055

                                                                         
Query: 131   tcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgttcttgatccga 190
             |||| ||||| |||||||||||||| ||||||||||| || |||||| |||||||||| |
Sbjct: 17056 tcattttcacagctagtcaaagtatttatgcagaacagctacttaatattcttgatccta 17115

                                                                         
Query: 191   aaagaaggttgttccgtcatcgagtttatcgcgagtcttgcgtctacgtggagggcaact 250
             |||| ||||||||||| ||||||||||| |||||||| ||  |||  |||||||| ||||
Sbjct: 17116 aaaggaggttgttccgccatcgagtttaccgcgagtcctgtctctttgtggagggaaact 17175

                                                                         
Query: 251   acttaaaggatctatcagttctcggacgtgacttgtctcgtgttgtcatagttgacaatt 310
             |||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 17176 acttaaaggatctatcagttcttggacgtgacttggctcgtgtggtcattgttgataatt 17235

                      
Query: 311   ctccacagg 319
             | |||||||
Sbjct: 17236 caccacagg 17244



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 419   tggttggtgtggaagatgtccggccat 445
             ||||||| |||||||||||||||||||
Sbjct: 18365 tggttggggtggaagatgtccggccat 18391



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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence,
            complete sequence
          Length = 145290

 Score =  343 bits (173), Expect = 3e-91
 Identities = 275/309 (88%)
 Strand = Plus / Minus

                                                                        
Query: 11   gtgaagattctgatttcactttcccagttcgttttaatctcagagatcacacaatctatg 70
            ||||||||||||| ||||| |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 3653 gtgaagattctgacttcacattcccagttcattttaatctcagagagcacacaatctatg 3594

                                                                        
Query: 71   tacggtgtcgtccatatctgaaagacttcctggagagagtagccagcatgtttgagataa 130
            | || || ||||||||||||||||| ||| |||||| |||||| |||||||||||||| |
Sbjct: 3593 tgcgttgccgtccatatctgaaagagttcttggagacagtagcaagcatgtttgagatca 3534

                                                                        
Query: 131  tcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgttcttgatccga 190
            |||| ||||| |||||||||||||| ||||||||||| || |||||| |||||||||| |
Sbjct: 3533 tcattttcacagctagtcaaagtatttatgcagaacagctacttaatattcttgatccta 3474

                                                                        
Query: 191  aaagaaggttgttccgtcatcgagtttatcgcgagtcttgcgtctacgtggagggcaact 250
            |||| ||||||||||| ||||||||||| |||||||| ||  |||  |||||||| ||||
Sbjct: 3473 aaaggaggttgttccgccatcgagtttaccgcgagtcctgtctctttgtggagggaaact 3414

                                                                        
Query: 251  acttaaaggatctatcagttctcggacgtgacttgtctcgtgttgtcatagttgacaatt 310
            |||||||||||||||||||||| |||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 3413 acttaaaggatctatcagttcttggacgtgacttggctcgtgtggtcattgttgataatt 3354

                     
Query: 311  ctccacagg 319
            | |||||||
Sbjct: 3353 caccacagg 3345



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 419  tggttggtgtggaagatgtccggccat 445
            ||||||| |||||||||||||||||||
Sbjct: 2224 tggttggggtggaagatgtccggccat 2198



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>ref|XM_477086.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1787

 Score =  186 bits (94), Expect = 4e-44
 Identities = 226/270 (83%)
 Strand = Plus / Plus

                                                                        
Query: 50   tcagagatcacacaatctatgtacggtgtcgtccatatctgaaagacttcctggagagag 109
            ||||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| |
Sbjct: 1205 tcagagaacacacaatatatgtccgatgccgtccctatctcaaagagttcttggagaggg 1264

                                                                        
Query: 110  tagccagcatgtttgagataatcatcttcacggctagtcaaagtatctatgcagaacaac 169
            | ||||   ||||||||| |||||| ||||| || |||||||| || ||||||||||| |
Sbjct: 1265 ttgccaatttgtttgagacaatcattttcactgcaagtcaaagcatttatgcagaacagc 1324

                                                                        
Query: 170  tgcttaatgttcttgatccgaaaagaaggttgttccgtcatcgagtttatcgcgagtctt 229
            | || |||||||||||||| ||||||| ||||||||||||||| ||||| || || || |
Sbjct: 1325 ttctcaatgttcttgatcctaaaagaaagttgttccgtcatcgtgtttaccgtgattcct 1384

                                                                        
Query: 230  gcgtctacgtggagggcaactacttaaaggatctatcagttctcggacgtgacttgtctc 289
            | || || |||||||| |||||||||||||||||| ||||||| |||||||||||  |||
Sbjct: 1385 gtgtttatgtggagggaaactacttaaaggatctaacagttcttggacgtgacttaactc 1444

                                          
Query: 290  gtgttgtcatagttgacaattctccacagg 319
            || |  | || |||||||| ||||||||||
Sbjct: 1445 gtataatgattgttgacaactctccacagg 1474



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  186 bits (94), Expect = 4e-44
 Identities = 226/270 (83%)
 Strand = Plus / Plus

                                                                           
Query: 50      tcagagatcacacaatctatgtacggtgtcgtccatatctgaaagacttcctggagagag 109
               ||||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| |
Sbjct: 5842086 tcagagaacacacaatatatgtccgatgccgtccctatctcaaagagttcttggagaggg 5842145

                                                                           
Query: 110     tagccagcatgtttgagataatcatcttcacggctagtcaaagtatctatgcagaacaac 169
               | ||||   ||||||||| |||||| ||||| || |||||||| || ||||||||||| |
Sbjct: 5842146 ttgccaatttgtttgagacaatcattttcactgcaagtcaaagcatttatgcagaacagc 5842205

                                                                           
Query: 170     tgcttaatgttcttgatccgaaaagaaggttgttccgtcatcgagtttatcgcgagtctt 229
               | || |||||||||||||| ||||||| ||||||||||||||| ||||| || || || |
Sbjct: 5842206 ttctcaatgttcttgatcctaaaagaaagttgttccgtcatcgtgtttaccgtgattcct 5842265

                                                                           
Query: 230     gcgtctacgtggagggcaactacttaaaggatctatcagttctcggacgtgacttgtctc 289
               | || || |||||||| |||||||||||||||||| ||||||| |||||||||||  |||
Sbjct: 5842266 gtgtttatgtggagggaaactacttaaaggatctaacagttcttggacgtgacttaactc 5842325

                                             
Query: 290     gtgttgtcatagttgacaattctccacagg 319
               || |  | || |||||||| ||||||||||
Sbjct: 5842326 gtataatgattgttgacaactctccacagg 5842355



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 315     acaggcctttgggttccagttggacaatggcat 347
               |||||| ||||| |||||||| |||||||||||
Sbjct: 5843035 acaggcttttggattccagttagacaatggcat 5843067



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>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1119_B04
          Length = 151721

 Score =  186 bits (94), Expect = 4e-44
 Identities = 226/270 (83%)
 Strand = Plus / Plus

                                                                          
Query: 50     tcagagatcacacaatctatgtacggtgtcgtccatatctgaaagacttcctggagagag 109
              ||||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| |
Sbjct: 149114 tcagagaacacacaatatatgtccgatgccgtccctatctcaaagagttcttggagaggg 149173

                                                                          
Query: 110    tagccagcatgtttgagataatcatcttcacggctagtcaaagtatctatgcagaacaac 169
              | ||||   ||||||||| |||||| ||||| || |||||||| || ||||||||||| |
Sbjct: 149174 ttgccaatttgtttgagacaatcattttcactgcaagtcaaagcatttatgcagaacagc 149233

                                                                          
Query: 170    tgcttaatgttcttgatccgaaaagaaggttgttccgtcatcgagtttatcgcgagtctt 229
              | || |||||||||||||| ||||||| ||||||||||||||| ||||| || || || |
Sbjct: 149234 ttctcaatgttcttgatcctaaaagaaagttgttccgtcatcgtgtttaccgtgattcct 149293

                                                                          
Query: 230    gcgtctacgtggagggcaactacttaaaggatctatcagttctcggacgtgacttgtctc 289
              | || || |||||||| |||||||||||||||||| ||||||| |||||||||||  |||
Sbjct: 149294 gtgtttatgtggagggaaactacttaaaggatctaacagttcttggacgtgacttaactc 149353

                                            
Query: 290    gtgttgtcatagttgacaattctccacagg 319
              || |  | || |||||||| ||||||||||
Sbjct: 149354 gtataatgattgttgacaactctccacagg 149383



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 315    acaggcctttgggttccagttggacaatggcat 347
              |||||| ||||| |||||||| |||||||||||
Sbjct: 150063 acaggcttttggattccagttagacaatggcat 150095



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>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1559_F09
          Length = 87792

 Score =  186 bits (94), Expect = 4e-44
 Identities = 226/270 (83%)
 Strand = Plus / Plus

                                                                         
Query: 50    tcagagatcacacaatctatgtacggtgtcgtccatatctgaaagacttcctggagagag 109
             ||||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| |
Sbjct: 16760 tcagagaacacacaatatatgtccgatgccgtccctatctcaaagagttcttggagaggg 16819

                                                                         
Query: 110   tagccagcatgtttgagataatcatcttcacggctagtcaaagtatctatgcagaacaac 169
             | ||||   ||||||||| |||||| ||||| || |||||||| || ||||||||||| |
Sbjct: 16820 ttgccaatttgtttgagacaatcattttcactgcaagtcaaagcatttatgcagaacagc 16879

                                                                         
Query: 170   tgcttaatgttcttgatccgaaaagaaggttgttccgtcatcgagtttatcgcgagtctt 229
             | || |||||||||||||| ||||||| ||||||||||||||| ||||| || || || |
Sbjct: 16880 ttctcaatgttcttgatcctaaaagaaagttgttccgtcatcgtgtttaccgtgattcct 16939

                                                                         
Query: 230   gcgtctacgtggagggcaactacttaaaggatctatcagttctcggacgtgacttgtctc 289
             | || || |||||||| |||||||||||||||||| ||||||| |||||||||||  |||
Sbjct: 16940 gtgtttatgtggagggaaactacttaaaggatctaacagttcttggacgtgacttaactc 16999

                                           
Query: 290   gtgttgtcatagttgacaattctccacagg 319
             || |  | || |||||||| ||||||||||
Sbjct: 17000 gtataatgattgttgacaactctccacagg 17029



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 315   acaggcctttgggttccagttggacaatggcat 347
             |||||| ||||| |||||||| |||||||||||
Sbjct: 17709 acaggcttttggattccagttagacaatggcat 17741



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>dbj|AK109769.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A05, full
            insert sequence
          Length = 1787

 Score =  186 bits (94), Expect = 4e-44
 Identities = 226/270 (83%)
 Strand = Plus / Plus

                                                                        
Query: 50   tcagagatcacacaatctatgtacggtgtcgtccatatctgaaagacttcctggagagag 109
            ||||||| |||||||| ||||| || || ||||| ||||| ||||| ||| ||||||| |
Sbjct: 1205 tcagagaacacacaatatatgtccgatgccgtccctatctcaaagagttcttggagaggg 1264

                                                                        
Query: 110  tagccagcatgtttgagataatcatcttcacggctagtcaaagtatctatgcagaacaac 169
            | ||||   ||||||||| |||||| ||||| || |||||||| || ||||||||||| |
Sbjct: 1265 ttgccaatttgtttgagacaatcattttcactgcaagtcaaagcatttatgcagaacagc 1324

                                                                        
Query: 170  tgcttaatgttcttgatccgaaaagaaggttgttccgtcatcgagtttatcgcgagtctt 229
            | || |||||||||||||| ||||||| ||||||||||||||| ||||| || || || |
Sbjct: 1325 ttctcaatgttcttgatcctaaaagaaagttgttccgtcatcgtgtttaccgtgattcct 1384

                                                                        
Query: 230  gcgtctacgtggagggcaactacttaaaggatctatcagttctcggacgtgacttgtctc 289
            | || || |||||||| |||||||||||||||||| ||||||| |||||||||||  |||
Sbjct: 1385 gtgtttatgtggagggaaactacttaaaggatctaacagttcttggacgtgacttaactc 1444

                                          
Query: 290  gtgttgtcatagttgacaattctccacagg 319
            || |  | || |||||||| ||||||||||
Sbjct: 1445 gtataatgattgttgacaactctccacagg 1474



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>gb|AY112440.1| Zea mays CL20332_1 mRNA sequence
          Length = 630

 Score =  180 bits (91), Expect = 3e-42
 Identities = 238/287 (82%)
 Strand = Plus / Minus

                                                                       
Query: 157 tatgcagaacaactgcttaatgttcttgatccgaaaagaaggttgttccgtcatcgagtt 216
           ||||| || ||||| || |||||||||||||| ||||||| ||||||||||||||| |||
Sbjct: 628 tatgcggagcaacttctcaatgttcttgatcccaaaagaaagttgttccgtcatcgtgtt 569

                                                                       
Query: 217 tatcgcgagtcttgcgtctacgtggagggcaactacttaaaggatctatcagttctcgga 276
           ||||| || ||||| ||||| |||||||| |||||| | ||||||||  |||| || |||
Sbjct: 568 tatcgtgaatcttgtgtctatgtggagggaaactacatgaaggatctgacagtacttgga 509

                                                                       
Query: 277 cgtgacttgtctcgtgttgtcatagttgacaattctccacaggcctttgggttccagttg 336
           ||||||||  |||| ||  | || |||||||||||||| |||||||||||||||||||||
Sbjct: 508 cgtgacttaactcgcgtaatgattgttgacaattctccgcaggcctttgggttccagttg 449

                                                                       
Query: 337 gacaatggcataccgatcgagagttggttcgacgacccaaacgacaaggagctcctagca 396
           ||||||||||| || || || || ||||| || || || || |||| |||||| ||   |
Sbjct: 448 gacaatggcattcctatagaaagctggtttgatgatcccaatgacatggagctgctgaaa 389

                                                          
Query: 397 ctgctaccgttcctggaaagcctggttggtgtggaagatgtccggcc 443
            |||| |||||| | |||||| |||| || |||||||||||| ||||
Sbjct: 388 ttgctcccgttcttagaaagcttggtcggcgtggaagatgtcaggcc 342



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>ref|XM_315066.2| Anopheles gambiae str. PEST ENSANGP00000011443
           (ENSANGG00000008954), partial mRNA
          Length = 839

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 302 ttgacaattctccacaggcctttgggttccagttggacaatggcataccgatcgagagtt 361
           |||| ||||| |||||||| ||||| | |||| |||| ||||| ||||| || |||||||
Sbjct: 455 ttgataattcaccacaggcatttggataccagctggaaaatggtataccaatagagagtt 514

                 
Query: 362 ggttcg 367
           ||||||
Sbjct: 515 ggttcg 520



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>emb|AL161548.2|ATCHRIV48 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 48
          Length = 194143

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 131   tcatcttcacggctagtcaaagtatctatgc 161
             ||||||||||||||||||| || ||||||||
Sbjct: 15108 tcatcttcacggctagtcacagcatctatgc 15078



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>emb|AL110123.1|ATF15J5 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J5 (ESSA project)
          Length = 58427

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 131   tcatcttcacggctagtcaaagtatctatgc 161
             ||||||||||||||||||| || ||||||||
Sbjct: 34699 tcatcttcacggctagtcacagcatctatgc 34669



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>emb|CT737180.5| M.truncatula DNA sequence from clone MTH2-117L19 on chromosome 3,
             complete sequence
          Length = 130239

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                         
Query: 121   tttgagataatcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgtt 180
             |||||||| || || || || |||||||||||||| ||||| || ||||| || || || 
Sbjct: 29757 tttgagattattatatttaccgctagtcaaagtatttatgctgagcaactcctaaacgtg 29816

                        
Query: 181   cttgatccgaa 191
             |||||||||||
Sbjct: 29817 cttgatccgaa 29827



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                               
Query: 316   caggcctttgggttccagttggacaatggcataccgatcgagagttggtt 365
             ||||| ||||| |||||  |||||||||| ||||| || |||||||||||
Sbjct: 31225 caggcatttggattccaagtggacaatggaataccaattgagagttggtt 31274



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 121   tttgagataatcatcttcacggctagtcaaagtatctatgcagaacaactgcttaatgtt 180
             |||||||| || || || || |||||||||||||| ||||| || ||||| || ||| | 
Sbjct: 36072 tttgagattattatatttacagctagtcaaagtatttatgctgagcaactcctaaatttg 36131

                     
Query: 181   cttgatcc 188
             ||||||||
Sbjct: 36132 cttgatcc 36139



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>emb|AJ970220.1| Aedes aegypti retroposon Juan-A 35 Ae aeg, clone 6
          Length = 399

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 81  tccatatctgaaagacttcctg 102
           ||||||||||||||||||||||
Sbjct: 352 tccatatctgaaagacttcctg 373



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>ref|XM_779528.1| PREDICTED: Strongylocentrotus purpuratus similar to Exocyst complex
           component Sec15A (rSec15) (LOC579409), mRNA
          Length = 2364

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 86  atctgaaagacttcctggagag 107
           ||||||||||||||||||||||
Sbjct: 578 atctgaaagacttcctggagag 599



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>gb|BC088917.1| Xenopus laevis hypothetical LOC496326, mRNA (cDNA clone MGC:84985
           IMAGE:6325151), complete cds
          Length = 2747

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 409 ctggaaagcctggttggtgtgg 430
           ||||||||||||||||||||||
Sbjct: 527 ctggaaagcctggttggtgtgg 506



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>emb|AL158071.23| Human DNA sequence from clone RP11-305L7 on chromosome 9 Contains four
              novel genes, a peptidylpolyl isomerase A (cyclophilin A)
              (PPIA) pseudogene, the 3' end of the AUH gene for AU RNA
              binding protein/enoyl-Coenzyme A hydratase and three CpG
              islands, complete sequence
          Length = 181623

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 95     acttcctggagagagtagcca 115
              |||||||||||||||||||||
Sbjct: 123315 acttcctggagagagtagcca 123335



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>gb|AC182736.3| Pan troglodytes BAC clone CH251-15A9 from chromosome 7, complete sequence
          Length = 181648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     gaagattctgatttcactttc 33
              |||||||||||||||||||||
Sbjct: 117745 gaagattctgatttcactttc 117725



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>gb|DQ145275.1| Drosophila miranda neo-Y Tsf3 gene, partial sequence
          Length = 714

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 333 gttggacaatggcataccgatcga 356
           ||||||||||| ||||||||||||
Sbjct: 383 gttggacaatgtcataccgatcga 360



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>gb|AC129573.16| Mus musculus chromosome 6, clone RP23-457B5, complete sequence
          Length = 178159

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    aactacttaaaggatctatc 266
              ||||||||||||||||||||
Sbjct: 111466 aactacttaaaggatctatc 111485



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>gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete sequence
          Length = 131577

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ggtgaagattctgatttcac 29
             ||||||||||||||||||||
Sbjct: 91631 ggtgaagattctgatttcac 91612



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>emb|AL449344.5| Human DNA sequence from clone RP11-280L17 on chromosome 9 Contains the 5'
              end of a novel gene, complete sequence
          Length = 178473

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     gaagattctgatttcacttt 32
              ||||||||||||||||||||
Sbjct: 116196 gaagattctgatttcacttt 116177



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>emb|AL121906.18|HSDJ63M2 Human DNA sequence from clone RP1-63M2 on chromosome 20 Contains the 3'
             end of the CBFA2T2 gene for runt domain core-binding
             factor alpha subunit 2, the C20orf134 gene, the E2F1 gene
             for E2F transcription factor 1, the APBA2BP gene for
             amyloid beta (A4) precursor protein-binding family A,
             member 2 protein, the C20orf144 gene and six CpG islands,
             complete sequence
          Length = 81914

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 326   ggttccagttggacaatggc 345
             ||||||||||||||||||||
Sbjct: 33176 ggttccagttggacaatggc 33157



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>gb|AC122546.14| Mus musculus chromosome 5, clone RP23-408A1, complete sequence
          Length = 191640

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   ttcctggaaagcctggttgg 425
             ||||||||||||||||||||
Sbjct: 56831 ttcctggaaagcctggttgg 56812



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>gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, complete sequence
          Length = 187084

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     aagattctgatttcactttc 33
              ||||||||||||||||||||
Sbjct: 157561 aagattctgatttcactttc 157580



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 292      gttgtcatagttgacaattctccacagg 319
                ||||| |||||||||||| |||||||||
Sbjct: 25133505 gttgtaatagttgacaatactccacagg 25133532



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>gb|AC080007.26| Homo sapiens 3 BAC RP11-529F4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ggtgaagattctgatttcac 29
             ||||||||||||||||||||
Sbjct: 64423 ggtgaagattctgatttcac 64404



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>gb|AC009313.4| Homo sapiens BAC clone RP11-440P12 from 2, complete sequence
          Length = 171881

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    atgcagaacaactgcttaat 177
              ||||||||||||||||||||
Sbjct: 109514 atgcagaacaactgcttaat 109495



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>gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, complete sequence
          Length = 192708

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aagattctgatttcactttc 33
             ||||||||||||||||||||
Sbjct: 27436 aagattctgatttcactttc 27455



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>dbj|AP002839.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0688A04
          Length = 143969

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 292    gttgtcatagttgacaattctccacagg 319
              ||||| |||||||||||| |||||||||
Sbjct: 133113 gttgtaatagttgacaatactccacagg 133140



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>gb|L12401.1|HUMLAMIN03 Human nuclear lamin A and nuclear lamin C gene, exons 3-12 and
            complete alternative mRNAs
          Length = 6110

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   tcctggagagagtagccagc 117
            ||||||||||||||||||||
Sbjct: 1462 tcctggagagagtagccagc 1481



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>dbj|AK102504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E13, full
            insert sequence
          Length = 2366

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 292  gttgtcatagttgacaattctccacagg 319
            ||||| |||||||||||| |||||||||
Sbjct: 1922 gttgtaatagttgacaatactccacagg 1949



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>dbj|AK063853.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D02, full
           insert sequence
          Length = 514

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 292 gttgtcatagttgacaattctccacagg 319
           ||||| |||||||||||| |||||||||
Sbjct: 66  gttgtaatagttgacaatactccacagg 93



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>emb|AL513424.3|HS109M15 Homo sapiens chromosome 9 BAC RP11-109M15, complete sequence
          Length = 184365

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 13   gaagattctgatttcacttt 32
            ||||||||||||||||||||
Sbjct: 4685 gaagattctgatttcacttt 4704


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,084,882
Number of Sequences: 3902068
Number of extensions: 3084882
Number of successful extensions: 52957
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52858
Number of HSP's gapped (non-prelim): 97
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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