>JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1)|
           (Mitsugumin-72) (Mg72)
          Length = 662

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
 Frame = +2

Query: 353 TTPPGSVNGTAKHTADDSNTPLSPVAVPAQKQLKYSAGIVNSPSKGV------AALNKQQ 514
           TTPPGS   + K+    S +P      PA+KQ   S   +N   +GV      A +NK  
Sbjct: 460 TTPPGSPEASPKY----SRSPQPSPPKPAKKQNPSSGARLNQDKRGVAEEQVTAIVNKPL 515

Query: 515 VKLVPIAQLPIGKKVSISGQSGK 583
               P  +  +G  VS S  SG+
Sbjct: 516 TSKAPTKE--VGAAVSQSKYSGR 536

>PARC_NEIGO (P48374) DNA topoisomerase 4 subunit A (EC 5.99.1.-) (Topoisomerase|
           IV subunit A)
          Length = 768

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
 Frame = +2

Query: 377 GTAKHTADDSNTPLSPVAVPAQKQLKYSAGIVNSPSKGVAALNKQQVKLVPIAQLPI--- 547
           G    TAD   T L PVAV       Y++  +N   K +AA ++ +    PI +L I   
Sbjct: 645 GKVVMTADSGETVLPPVAV-------YASSFINPDCKIIAATSQNRALAFPIGELKIMAK 697

Query: 548 GKKVSISG 571
           GK + I G
Sbjct: 698 GKGLQIIG 705

>KIF4A_HUMAN (O95239) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1232

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 17/66 (25%), Positives = 34/66 (51%)
 Frame = +2

Query: 8    RIASLESMVTISSNTLVAMASQLSEAEERERAFSGRGRWNQLRSMGEAKSLLQYIFSVAA 187
            +I SLE+ +   S  +  +  +L +AE  +R    + RW  + ++ EAK  L+Y+     
Sbjct: 819  QIESLETEMEFRSAQIADLQQKLLDAESEDRP---KQRWENIATILEAKCALKYLIGELV 875

Query: 188  DARCEV 205
             ++ +V
Sbjct: 876  SSKIQV 881

>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)|
          Length = 1262

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = +2

Query: 320 SKQKEQTAPMATTPPGSVNGTAKHTADDSNTPLSPVAVPAQKQLKYSA 463
           SK+++ TAP A+TP  S+   A H A   N  L P +V A    K SA
Sbjct: 481 SKKQQSTAPQASTPAASLLPKAVHLA---NLNLVPHSVAASVTAKSSA 525

>CUBN_MOUSE (Q9JLB4) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
          Length = 3623

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 480  GLFTIPAEYFSCFCAGTATGDSGVLES 400
            G     A+Y    C GT +GDSGV+ES
Sbjct: 2323 GYMGFKAKYSIASCGGTVSGDSGVIES 2349

>Y068_CHLMU (Q9PLN1) Hypothetical protein TC0068|
          Length = 392

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 15  HHLRAWSQSLQILLSRWLLNF 77
           H  RAW++ +++LL RWLL++
Sbjct: 333 HSPRAWARMMRVLLMRWLLDY 353

>FIE2_MAIZE (Q8VZY6) Polycomb group protein FIE2 (FERTILIZATION-INDEPENDENT|
           ENDOSPERM 2)
          Length = 379

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +2

Query: 467 IVNSPSKGVAALNKQQVKLVPIAQLPI---GKKVSISGQSGKLWRWKRSHH 610
           + +SP   +A L  QQ K  PI Q  +   G  +  +G+ G +WRW    H
Sbjct: 325 VQSSPPVLIARLYNQQCKS-PIRQTAVSFDGSTILGAGEDGTIWRWDEVDH 374

>LYPL1_PONPY (Q5R8C2) Lysophospholipase-like protein 1 (EC 3.1.2.-)|
          Length = 236

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -3

Query: 193 GIRSNAKDVLQQTLCFSH*PQLIPTATPREST 98
           G+R   K VL Q L F H   + PTA PR  T
Sbjct: 35  GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYT 66

>LYPL1_HUMAN (Q5VWZ2) Lysophospholipase-like protein 1 (EC 3.1.2.-)|
          Length = 236

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -3

Query: 193 GIRSNAKDVLQQTLCFSH*PQLIPTATPREST 98
           G+R   K VL Q L F H   + PTA PR  T
Sbjct: 35  GLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYT 66

>KIF4A_CHICK (Q90640) Chromosome-associated kinesin KIF4A (Chromokinesin)|
          Length = 1225

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/65 (23%), Positives = 35/65 (53%)
 Frame = +2

Query: 8    RIASLESMVTISSNTLVAMASQLSEAEERERAFSGRGRWNQLRSMGEAKSLLQYIFSVAA 187
            +I SLE+ + + S  +  +  +L +A+  +R    + RW+ + ++ EAK  L+Y+     
Sbjct: 823  QIESLETEMELRSAQIADLQQKLLDADNGDRV---KQRWDNIATILEAKCALKYLLGELV 879

Query: 188  DARCE 202
             ++ +
Sbjct: 880  SSKVQ 884

>CUBN_RAT (O70244) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
            (Intrinsic factor-vitamin B12 receptor) (Glycoprotein
            280) (gp280) (460 kDa receptor)
          Length = 3623

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 462  AEYFSCFCAGTATGDSGVLES 400
            A+Y    C GT +GDSGV+ES
Sbjct: 2329 AKYSIASCGGTVSGDSGVIES 2349

>ATG18_CRYNE (Q5KGQ2) Autophagy-related protein 18|
          Length = 423

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 15/81 (18%)
 Frame = +2

Query: 404 SNTPLSPVAVPAQKQLKYSAGIVNSPSKGVAALNKQQVKLVPIAQLPI---GKKVSISGQ 574
           S+TPLS  A+PA      +  ++   +  + ALN  Q    PIA L +   G  ++ +  
Sbjct: 163 SSTPLSSSAIPAPPPAPTTGDVLLFDTISLTALNVIQAHKTPIAALALNSTGTMLATASD 222

Query: 575 SG------------KLWRWKR 601
            G            KLW+++R
Sbjct: 223 KGTVVRVFSVPDAKKLWQFRR 243

>EZH2_MOUSE (Q61188) Enhancer of zeste homolog 2 (ENX-1)|
          Length = 746

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = -2

Query: 425 PVIVA---CWSHLQCASRCHLRFPEV**PWGLSALSACSAFQVPSYVIHCVEEC 273
           P ++A   C    QC+S C  RFP      G    + C+  Q P Y+   V EC
Sbjct: 535 PCVIAQNFCEKFCQCSSECQNRFP------GCRCKAQCNTKQCPCYL--AVREC 580

>EZH2_HUMAN (Q15910) Enhancer of zeste homolog 2 (ENX-1)|
          Length = 746

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = -2

Query: 425 PVIVA---CWSHLQCASRCHLRFPEV**PWGLSALSACSAFQVPSYVIHCVEEC 273
           P ++A   C    QC+S C  RFP      G    + C+  Q P Y+   V EC
Sbjct: 535 PCVIAQNFCEKFCQCSSECQNRFP------GCRCKAQCNTKQCPCYL--AVREC 580

>RHBD4_MOUSE (P58873) Rhomboid-related protein 4 (EC 3.4.21.105) (Ventrhoid|
           transmembrane protein)
          Length = 404

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 606 WLLFHLQSFPDCPDIETFLPIGNCAIGTSL 517
           WL FH  ++P CP       +G  A+G +L
Sbjct: 324 WLRFHPSAYPPCPHPSFVAHLGGVAVGITL 353

>RHBD4_HUMAN (P58872) Rhomboid-related protein 4 (EC 3.4.21.105) (Ventrhoid|
           transmembrane protein)
          Length = 404

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 606 WLLFHLQSFPDCPDIETFLPIGNCAIGTSL 517
           WL FH  ++P CP       +G  A+G +L
Sbjct: 324 WLRFHPSAYPPCPHPSFVAHLGGVAVGITL 353


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,704,331
Number of Sequences: 219361
Number of extensions: 1511907
Number of successful extensions: 4810
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4809
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)