ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30e07 |
|---|---|
| Clone Library Name | barley_pub |
>HS74L_HUMAN (O95757) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 839 Score = 49.7 bits (117), Expect = 4e-06 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 2/79 (2%) Frame = +3 Query: 3 DNESQQTVVFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTI-GPFQS 176 ++ S + VF K +P P K +TF++ F ++ + ++ +I ++TI F Sbjct: 411 EDGSGECEVFCKNHPAPFSKVITFHKKEPFELEAFYTNLHEVPYPDARIGSFTIQNVFPQ 470 Query: 177 SKGEKAKLKVKVRLNIHGI 233 S G+ +K+KVKVR+NIHGI Sbjct: 471 SDGDSSKVKVKVRVNIHGI 489
>HS74L_MOUSE (P48722) Heat shock 70 kDa protein 4L (Osmotic stress protein 94)| (Heat shock 70-related protein APG-1) Length = 838 Score = 49.7 bits (117), Expect = 4e-06 Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%) Frame = +3 Query: 27 VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTI-GPFQSSKGEKAKL 200 VF K +P P K +TF++ F ++ + ++ +I +TI F S G+ +K+ Sbjct: 419 VFSKNHPAPFSKVITFHKKEPFELEAFYTNLHEVPYPDPRIGNFTIQNVFPQSDGDSSKV 478 Query: 201 KVKVRLNIHGI 233 KVKVR+NIHGI Sbjct: 479 KVKVRINIHGI 489
>HSP7F_SCHPO (O59838) Heat shock protein homolog pss1| Length = 720 Score = 49.3 bits (116), Expect = 5e-06 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 3/79 (3%) Frame = +3 Query: 9 ESQQTVVFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDL--QITHKISTYTIGPFQSSK 182 E VF +GNP+PS K LTFYR + F + L I I+ Y I +K Sbjct: 417 EDSSLEVFSEGNPIPSTKILTFYRKAPFKLLAAYSKEAQLPGSIKQNIAQYLINDVVPNK 476 Query: 183 -GEKAKLKVKVRLNIHGIV 236 G+ + +K+KVRL++HGI+ Sbjct: 477 DGDLSIVKIKVRLDLHGIL 495
>HSP74_MOUSE (Q61316) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) Length = 841 Score = 48.5 bits (114), Expect = 8e-06 Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +3 Query: 27 VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH----KISTYTIGPFQSSKGEKA 194 VFPK + P K LTFYR F ++ DL + S + P S G + Sbjct: 419 VFPKNHAAPFSKVLTFYRKEPFTLEAYYSSPQDLPYPDPAIAQFSVQKVTP--QSDGSSS 476 Query: 195 KLKVKVRLNIHGI 233 K+KVKVR+N+HGI Sbjct: 477 KVKVKVRVNVHGI 489
>HSP88_NEUCR (O74225) Heat shock protein Hsp88| Length = 707 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Frame = +3 Query: 6 NESQQTVVFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDL--QITHKISTYTIGPFQSS 179 +E VVF KGN +PS K LTFYR F ++ + ++L + + I ++I ++ Sbjct: 412 DEDTSLVVFNKGNVLPSTKILTFYRKQPFDLEARYTNPEELPGKTSPFIGRFSIKGVHAT 471 Query: 180 KGEKAKL--KVKVRLNIHGIV 236 +G + + K+K R+NIHGI+ Sbjct: 472 EGPEDFMICKLKARINIHGIL 492
>HSP74_HUMAN (P34932) Heat shock 70 kDa protein 4 (Heat shock 70-related protein| APG-2) (HSP70RY) Length = 840 Score = 45.8 bits (107), Expect = 5e-05 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +3 Query: 12 SQQTVVFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH----KISTYTIGPFQSS 179 S VF K + P K LTFYR F ++ DL + S + P S Sbjct: 414 SSDCEVFSKNHAAPFSKVLTFYRKEPFTLEAYYSSPQDLPYPDPAIAQFSVQKVTP--QS 471 Query: 180 KGEKAKLKVKVRLNIHGI 233 G +K+KVKVR+N+HGI Sbjct: 472 DGSSSKVKVKVRVNVHGI 489
>HSP97_STRFN (Q94738) 97 kDa heat shock protein (Heat shock protein 110)| Length = 886 Score = 45.4 bits (106), Expect = 7e-05 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 3 DNESQQTVVFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITHKISTYTI-GPFQSS 179 + E V K + P K LTFYR F + DT+ +I + I G F ++ Sbjct: 410 EGEDGSMEVSHKNHQAPFSKMLTFYRKEPFELVARYADTNLPLPERRIGRFKINGVFPTA 469 Query: 180 KGEKAKLKVKVRLNIHGI 233 +GE +K+KVKVR++ HGI Sbjct: 470 EGESSKIKVKVRVDGHGI 487
>HS105_CRIGR (Q60446) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 44.7 bits (104), Expect = 1e-04 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +3 Query: 3 DNESQQTV--VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTIGPFQ 173 D+E + V VF + + P K LTF R F ++ D + KI + + Sbjct: 409 DSEETEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAKIGRFVVQNVS 468 Query: 174 SSK-GEKAKLKVKVRLNIHGI 233 + K GEK+K+KVKVR+N HGI Sbjct: 469 AQKDGEKSKVKVKVRVNTHGI 489
>HS105_RAT (Q66HA8) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 44.3 bits (103), Expect = 2e-04 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +3 Query: 3 DNESQQTV--VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTIGPFQ 173 D+E + V VF + + P K LTF R F ++ D + KI + + Sbjct: 409 DSEETEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQAVPYPEAKIGRFVVQNVS 468 Query: 174 SSK-GEKAKLKVKVRLNIHGI 233 + K GEK+K+KVKVR+N HGI Sbjct: 469 AQKDGEKSKVKVKVRVNTHGI 489
>HSP97_STRPU (Q06068) 97 kDa heat shock protein (Egg sperm receptor)| Length = 889 Score = 43.5 bits (101), Expect = 3e-04 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 3 DNESQQTVVFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITHKISTYTI-GPFQSS 179 + E V K + P K LTFYR + F + D + +I + I G F ++ Sbjct: 410 EGEDGSMEVSSKNHQAPFSKMLTFYRKAPFELVARYADPNLPIPERRIGRFKINGVFPTT 469 Query: 180 KGEKAKLKVKVRLNIHGI 233 +GE +K+KVKVR++ HGI Sbjct: 470 EGESSKIKVKVRVDGHGI 487
>HS105_PONPY (Q5R606) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| Length = 858 Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +3 Query: 3 DNESQQTV--VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTIGPFQ 173 D+E + V VF + + P K LTF R F ++ D + KI + + Sbjct: 409 DSEDTEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAKIGRFVVQNVS 468 Query: 174 SSK-GEKAKLKVKVRLNIHGI 233 + K GEK+++KVKVR+N HGI Sbjct: 469 AQKDGEKSRVKVKVRVNTHGI 489
>HS105_MOUSE (Q61699) Heat-shock protein 105 kDa (Heat shock-related 100 kDa| protein E7I) (HSP-E7I) (Heat shock 110 kDa protein) (42 degrees C-HSP) Length = 858 Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +3 Query: 3 DNESQQTV--VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTIGPFQ 173 D+E + V VF + + P K LTF R F ++ D + KI + + Sbjct: 409 DSEETEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAKIGRFVVQNVS 468 Query: 174 SSK-GEKAKLKVKVRLNIHGI 233 + K GEK+++KVKVR+N HGI Sbjct: 469 AQKDGEKSRVKVKVRVNTHGI 489
>HS105_HUMAN (Q92598) Heat-shock protein 105 kDa (Heat shock 110 kDa protein)| (Antigen NY-CO-25) Length = 858 Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +3 Query: 3 DNESQQTV--VFPKGNPMPSIKALTFYRSSTFAVDVLNVDTDDLQITH-KISTYTIGPFQ 173 D+E + V VF + + P K LTF R F ++ D + KI + + Sbjct: 409 DSEDTEGVHEVFSRNHAAPFSKVLTFLRRGPFELEAFYSDPQGVPYPEAKIGRFVVQNVS 468 Query: 174 SSK-GEKAKLKVKVRLNIHGI 233 + K GEK+++KVKVR+N HGI Sbjct: 469 AQKDGEKSRVKVKVRVNTHGI 489
>NFYC4_ARATH (Q9FMV5) Nuclear transcription factor Y subunit C-4 (AtNF-YC-4)| Length = 250 Score = 30.8 bits (68), Expect = 1.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -3 Query: 126 NHLCQHSKHPLQMYWTYRRSE 64 +HL Q + LQM+WTY+R E Sbjct: 47 HHLLQQQQQQLQMFWTYQRQE 67
>NFYC1_ARATH (Q9SMP0) Nuclear transcription factor Y subunit C-1 (AtNF-YC-1)| (Transcriptional activator HAP5A) Length = 234 Score = 29.6 bits (65), Expect = 4.1 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -3 Query: 126 NHLCQHSKHPLQMYWTYRRSE 64 +HL Q + LQ++WTY+R E Sbjct: 34 HHLLQQQQQQLQLFWTYQRQE 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,182,824 Number of Sequences: 219361 Number of extensions: 984671 Number of successful extensions: 2054 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2002 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2046 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
