| Clone Name | bags30e07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122040.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113E02, full insert sequence Length = 3137 Score = 165 bits (83), Expect = 2e-37 Identities = 241/293 (82%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 67 tgaccttctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatt 126 |||||||||||||||||| |||||||||||| || ||| ||| ||| || ||||||||| Sbjct: 1472 tgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatt 1531 Query: 127 tgcaaataacacacaaaattagcacttacacgatcggccctttccaatctagcaaaggtg 186 ||||||| | | ||||| ||| | || || || |||||||||||||| |||||| || Sbjct: 1532 tgcaaatggctaaaaaaatcagctcctatacaattggccctttccaatccagcaaacctg 1591 Query: 187 agaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctctcttgaat 246 ||||||| ||| |||| ||||||| | |||||||||||||||||||||||| |||||| Sbjct: 1592 agaaggcaaaagtgaatgtgaaagcatgtctcaacatccatgggatagtctctattgaat 1651 Query: 247 cagcaacgatgctggaagaggaggaagtggaagttccggtttcatctatgagtgaggtgc 306 |||||| ||||||| |||||||||||||| |||||||| || ||| | |||| | Sbjct: 1652 cagcaatgatgctg---gaggaggaagtggatgttccggtagcaactacaaatgagacac 1708 Query: 307 caaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 359 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 1709 taaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 1761 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 404 agattctgaggaaaaaactgttccaatggatactgacacaaaggttgagccat 456 |||||||||||||| | ||| ||||||||||||||| | ||||||||||||| Sbjct: 1836 agattctgaggaaatatctgctccaatggatactgatgccaaggttgagccat 1888
>ref|NM_189556.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3139 Score = 163 bits (82), Expect = 6e-37 Identities = 223/270 (82%) Strand = Plus / Plus Query: 14 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 73 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 1450 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 1509 Query: 74 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 133 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 1510 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 1569 Query: 134 aacacacaaaattagcacttacacgatcggccctttccaatctagcaaaggtgagaaggc 193 | ||| || || |||||||||||| | || |||||| | | |||||||||| || || Sbjct: 1570 atcaccaaagatcagcacttacacggttggtcctttcaatcccggcaaaggtgacaaagc 1629 Query: 194 taaactgaaagtgaaagttcgcctcaacatccatgggatagtctctcttgaatcagcaac 253 ||||||||||||||||| ||||| |||||||||||| | ||| | ||||||||||||| Sbjct: 1630 gaaactgaaagtgaaagtccgccttaacatccatggggtggtcacagttgaatcagcaac 1689 Query: 254 gatgctggaagaggaggaagtggaagttcc 283 ||| |||| |||||||||||||||||||| Sbjct: 1690 aatgttggaggaggaggaagtggaagttcc 1719 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 386 tgctgaaaacggggcacgagattctgaggaaaaaactgttccaatggatactgacacaaa 445 ||||||||| || |||| | |||||||||||||| | || || ||||| ||||| | || Sbjct: 1852 tgctgaaaatggcgcaccaaattctgaggaaaaatcagtccctatggaaactgatgccaa 1911 Query: 446 ggttgagccatcaaaaaagaaagt 469 ||||||||||||||| |||||||| Sbjct: 1912 ggttgagccatcaaagaagaaagt 1935 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atggagacagatgatgcacc 343 |||||||||||||||||||| Sbjct: 1760 atggagacagatgatgcacc 1779
>dbj|AK100676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113C17, full insert sequence Length = 3139 Score = 163 bits (82), Expect = 6e-37 Identities = 223/270 (82%) Strand = Plus / Plus Query: 14 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 73 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 1450 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 1509 Query: 74 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 133 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 1510 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 1569 Query: 134 aacacacaaaattagcacttacacgatcggccctttccaatctagcaaaggtgagaaggc 193 | ||| || || |||||||||||| | || |||||| | | |||||||||| || || Sbjct: 1570 atcaccaaagatcagcacttacacggttggtcctttcaatcccggcaaaggtgacaaagc 1629 Query: 194 taaactgaaagtgaaagttcgcctcaacatccatgggatagtctctcttgaatcagcaac 253 ||||||||||||||||| ||||| |||||||||||| | ||| | ||||||||||||| Sbjct: 1630 gaaactgaaagtgaaagtccgccttaacatccatggggtggtcacagttgaatcagcaac 1689 Query: 254 gatgctggaagaggaggaagtggaagttcc 283 ||| |||| |||||||||||||||||||| Sbjct: 1690 aatgttggaggaggaggaagtggaagttcc 1719 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 386 tgctgaaaacggggcacgagattctgaggaaaaaactgttccaatggatactgacacaaa 445 ||||||||| || |||| | |||||||||||||| | || || ||||| ||||| | || Sbjct: 1852 tgctgaaaatggcgcaccaaattctgaggaaaaatcagtccctatggaaactgatgccaa 1911 Query: 446 ggttgagccatcaaaaaagaaagt 469 ||||||||||||||| |||||||| Sbjct: 1912 ggttgagccatcaaagaagaaagt 1935 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atggagacagatgatgcacc 343 |||||||||||||||||||| Sbjct: 1760 atggagacagatgatgcacc 1779
>gb|AY103680.1| Zea mays PCO080984 mRNA sequence Length = 1931 Score = 133 bits (67), Expect = 6e-28 Identities = 181/219 (82%) Strand = Plus / Plus Query: 13 cccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacct 72 |||||||||| |||||||||| ||||||||| |||| ||||||| || | ||| |||| Sbjct: 339 cccaacaaacccttgtattcccaaaggggaatgcaattcctagcactaaagttcttacct 398 Query: 73 tctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaa 132 ||| || ||||||||||||| ||| ||||||||| |||| ||| || | | || |||| Sbjct: 399 tctttaaatccagtacatttgaagttgatgttttgtatgtcgacccaaacggcttacaaa 458 Query: 133 taacacacaaaattagcacttacacgatcggccctttccaatctagcaaaggtgagaagg 192 | |||| ||||| ||||| ||||| || |||||||||||| | |||||| ||||||| Sbjct: 459 ttccacaaaaaataagcacatacacaattggccctttccaaacctccaaaggagagaagg 518 Query: 193 ctaaactgaaagtgaaagttcgcctcaacatccatggga 231 | ||||||||||||||||| || |||||||||||||||| Sbjct: 519 ccaaactgaaagtgaaagtgcgtctcaacatccatggga 557 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 404 agattctgaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaa 463 |||| ||||||||||| ||||||| ||||| ||||| ||||||||||||| |||||||| Sbjct: 762 agatactgaggaaaaatctgttccgatggaaactgatgcaaaggttgagccgtcaaaaaa 821 Query: 464 gaaagtt 470 ||||||| Sbjct: 822 gaaagtt 828
>gb|BT018784.1| Zea mays clone EL01N0527D07.d mRNA sequence Length = 2082 Score = 119 bits (60), Expect = 9e-24 Identities = 198/244 (81%) Strand = Plus / Plus Query: 25 ttgtattccccaaggggaatccaatgcctagcatcaaggctctgaccttctataggtcca 84 ||||||| || ||||||||| ||| || ||||| || ||||| |||||||||| |||| Sbjct: 521 ttgtatttccaaaggggaatgtaattcccagcattaaagctctaaccttctataaatcca 580 Query: 85 gtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaataacacacaaaa 144 ||||||||| ||| ||||||||| |||| |||||| || | |||||| |||| || | Sbjct: 581 gtacatttgaagttgatgttttgtatgtggacacatgcgactcgcaaattccacagaaga 640 Query: 145 ttagcacttacacgatcggccctttccaatctagcaaaggtgagaaggctaaactgaaag 204 | ||||||||||| || || ||||||||| | ||||||||||| ||| |||||||||| Sbjct: 641 taagcacttacacaattggacctttccaaccctccaaaggtgagagggccaaactgaaag 700 Query: 205 tgaaagttcgcctcaacatccatgggatagtctctcttgaatcagcaacgatgctggaag 264 | ||||| || ||||||||||| ||||| ||| | |||| ||||| | ||||||||| | Sbjct: 701 ttaaagtgcgtctcaacatccacgggattgtcacagttgattcagctatgatgctggagg 760 Query: 265 agga 268 |||| Sbjct: 761 agga 764 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 411 gaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaagaaagtt 470 ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 927 gaggaaaaatctgttccaatggaaactgatgcaaaggttgagccatcaaaaaggaaagtt 986
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 93.7 bits (47), Expect = 5e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 162 ggccctttccaatctagcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaac 221 |||||||||||||| |||||| ||||||||| ||| |||| ||||||| | |||||| Sbjct: 4822432 ggccctttccaatccagcaaacctgagaaggcaaaagtgaatgtgaaagcatgtctcaac 4822491 Query: 222 atccatgggatagtctctcttgaatcagcaa 252 |||||||||||||||||| |||||||||||| Sbjct: 4822492 atccatgggatagtctctattgaatcagcaa 4822522 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 67 tgaccttctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatt 126 |||||||||||||||||| |||||||||||| || ||| ||| ||| || ||||||||| Sbjct: 4822230 tgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatt 4822289 Query: 127 tgcaaat 133 ||||||| Sbjct: 4822290 tgcaaat 4822296 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 404 agattctgaggaaaaaactgttccaatggatactga 439 |||||||||||||| | ||| ||||||||||||||| Sbjct: 4822786 agattctgaggaaatatctgctccaatggatactga 4822821 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 308 aaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 359 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 4822660 aaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 4822711
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 93.7 bits (47), Expect = 5e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 162 ggccctttccaatctagcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaac 221 |||||||||||||| |||||| ||||||||| ||| |||| ||||||| | |||||| Sbjct: 94840 ggccctttccaatccagcaaacctgagaaggcaaaagtgaatgtgaaagcatgtctcaac 94899 Query: 222 atccatgggatagtctctcttgaatcagcaa 252 |||||||||||||||||| |||||||||||| Sbjct: 94900 atccatgggatagtctctattgaatcagcaa 94930 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 67 tgaccttctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatt 126 |||||||||||||||||| |||||||||||| || ||| ||| ||| || ||||||||| Sbjct: 94638 tgaccttctataggtccaatacatttgcagtagacgttgtgagtgtcgatgcagatgatt 94697 Query: 127 tgcaaat 133 ||||||| Sbjct: 94698 tgcaaat 94704 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 404 agattctgaggaaaaaactgttccaatggatactga 439 |||||||||||||| | ||| ||||||||||||||| Sbjct: 95194 agattctgaggaaatatctgctccaatggatactga 95229 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 308 aaaggatgctactacaatggagacagatgatgcaccacaggaccctgcttct 359 |||||||| ||||| |||||| ||||||||||||| | |||||||||||| Sbjct: 95068 aaaggatgatactaaaatggatacagatgatgcactaggtgaccctgcttct 95119
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 14 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 73 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 4255591 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 4255650 Query: 74 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 133 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 4255651 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 4255710 Query: 134 aacacacaaaattagcacttacacg 158 | ||| || || |||||||||||| Sbjct: 4255711 atcaccaaagatcagcacttacacg 4255735 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 178 gcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtct 237 |||||||||| || || ||||||||||||||||| ||||| |||||||||||| | ||| Sbjct: 4255861 gcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtca 4255920 Query: 238 ctcttgaatcagcaac 253 | ||||||||||||| Sbjct: 4255921 cagttgaatcagcaac 4255936 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 254 gatgctggaagaggaggaagtggaagttcc 283 |||| |||| |||||||||||||||||||| Sbjct: 4256033 gatgttggaggaggaggaagtggaagttcc 4256062 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 aggttgagccatcaaaaaagaaagt 469 |||||||||||||||| |||||||| Sbjct: 4256827 aggttgagccatcaaagaagaaagt 4256851 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atggagacagatgatgcacc 343 |||||||||||||||||||| Sbjct: 4256103 atggagacagatgatgcacc 4256122
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 14 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 73 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 93558 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 93617 Query: 74 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 133 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 93618 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 93677 Query: 134 aacacacaaaattagcacttacacg 158 | ||| || || |||||||||||| Sbjct: 93678 atcaccaaagatcagcacttacacg 93702 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 178 gcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtct 237 |||||||||| || || ||||||||||||||||| ||||| |||||||||||| | ||| Sbjct: 93828 gcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtca 93887 Query: 238 ctcttgaatcagcaac 253 | ||||||||||||| Sbjct: 93888 cagttgaatcagcaac 93903 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 254 gatgctggaagaggaggaagtggaagttcc 283 |||| |||| |||||||||||||||||||| Sbjct: 94000 gatgttggaggaggaggaagtggaagttcc 94029 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 aggttgagccatcaaaaaagaaagt 469 |||||||||||||||| |||||||| Sbjct: 94794 aggttgagccatcaaagaagaaagt 94818 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atggagacagatgatgcacc 343 |||||||||||||||||||| Sbjct: 94070 atggagacagatgatgcacc 94089
>dbj|AP003047.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0666G04 Length = 141983 Score = 81.8 bits (41), Expect = 2e-12 Identities = 119/145 (82%) Strand = Plus / Plus Query: 14 ccaacaaactgttgtattccccaaggggaatccaatgcctagcatcaaggctctgacctt 73 |||||| |||||||||||||||||||| || ||| |||| ||| | || || ||||||| Sbjct: 35361 ccaacagactgttgtattccccaagggtaacccattgcccagcgttaaagcattgacctt 35420 Query: 74 ctataggtccagtacatttgcagtggatgttttgaatgttgacacagatgatttgcaaat 133 ||||||||||| ||||||| ||| ||||| | ||||||| || | |||||||||||| Sbjct: 35421 ctataggtccaatacatttcaagtagatgtcacgtatgttgatactggtgatttgcaaat 35480 Query: 134 aacacacaaaattagcacttacacg 158 | ||| || || |||||||||||| Sbjct: 35481 atcaccaaagatcagcacttacacg 35505 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 178 gcaaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtct 237 |||||||||| || || ||||||||||||||||| ||||| |||||||||||| | ||| Sbjct: 35631 gcaaaggtgacaaagcgaaactgaaagtgaaagtccgccttaacatccatggggtggtca 35690 Query: 238 ctcttgaatcagcaac 253 | ||||||||||||| Sbjct: 35691 cagttgaatcagcaac 35706 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 254 gatgctggaagaggaggaagtggaagttcc 283 |||| |||| |||||||||||||||||||| Sbjct: 35803 gatgttggaggaggaggaagtggaagttcc 35832 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 aggttgagccatcaaaaaagaaagt 469 |||||||||||||||| |||||||| Sbjct: 36597 aggttgagccatcaaagaagaaagt 36621 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 atggagacagatgatgcacc 343 |||||||||||||||||||| Sbjct: 35873 atggagacagatgatgcacc 35892
>gb|AY108406.1| Zea mays PCO080983 mRNA sequence Length = 1289 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 411 gaggaaaaaactgttccaatggatactgacacaaaggttgagccatcaaaaaagaaagt 469 ||||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||| Sbjct: 105 gaggaaaaatctgttccaatggaaactgatgcaaaggttgagccatcaaaaaggaaagt 163
>ref|NM_180653.1| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.1 mRNA, complete cds Length = 2941 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Plus Query: 180 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 239 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1563 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1622 Query: 240 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 280 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1623 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>ref|NM_106641.3| Arabidopsis thaliana ATP binding AT1G79920 transcript variant AT1G79920.2 mRNA, complete cds Length = 2941 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Plus Query: 180 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 239 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1563 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1622 Query: 240 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 280 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1623 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>gb|BT000810.1| Arabidopsis thaliana At1g79920 mRNA sequence Length = 2952 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Plus Query: 180 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 239 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1556 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1615 Query: 240 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 280 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1616 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1656
>gb|AY065177.1| Arabidopsis thaliana putative heat-shock protein (At1g79920; F19K16.12) mRNA, complete cds Length = 2850 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Plus Query: 180 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 239 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 1563 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 1622 Query: 240 cttgaatcagcaacgatgctggaagaggaggaagtggaagt 280 ||||||||||||| | |||||||||| ||||| ||||| Sbjct: 1623 gttgaatcagcaactcttttggaagaggaagaagttgaagt 1663
>gb|AC153571.14| Mus musculus 10 BAC RP23-309H16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184967 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 344 acaggaccctgcttctagtgctg 366 ||||||||||||||||||||||| Sbjct: 97731 acaggaccctgcttctagtgctg 97753
>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence Length = 179077 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 127 tgcaaataacacacaaaattag 148 |||||||||||||||||||||| Sbjct: 65068 tgcaaataacacacaaaattag 65089
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 44.1 bits (22), Expect = 0.41 Identities = 61/74 (82%) Strand = Plus / Plus Query: 180 aaaggtgagaaggctaaactgaaagtgaaagttcgcctcaacatccatgggatagtctct 239 ||||| |||| ||| || ||||||||||||||| | | ||| | ||||| || |||||| Sbjct: 43577 aaaggcgagagggcaaagctgaaagtgaaagttagattgaacctgcatggaattgtctct 43636 Query: 240 cttgaatcagcaac 253 ||||||||||||| Sbjct: 43637 gttgaatcagcaac 43650 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 38956 tggaagaggaagaagttgaagttccggt 38983
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete sequence Length = 300468 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 127 tgcaaataacacacaaaattag 148 |||||||||||||||||||||| Sbjct: 266957 tgcaaataacacacaaaattag 266936
>emb|CR626909.11| Zebrafish DNA sequence from clone DKEY-78D3 in linkage group 15, complete sequence Length = 96878 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 ataacacacaaaattagcactt 153 |||||||||||||||||||||| Sbjct: 30377 ataacacacaaaattagcactt 30356
>gb|AC131747.5| Mus musculus BAC clone RP23-36O24 from chromosome 14, complete sequence Length = 212930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gatgctggaagaggaggaagt 274 ||||||||||||||||||||| Sbjct: 70195 gatgctggaagaggaggaagt 70215
>ref|XM_513540.1| PREDICTED: Pan troglodytes similar to kynurenine aminotransferase III (LOC456999), mRNA Length = 4467 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 1291 gctggaagaggaggaagtgga 1311
>gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chromosome 4, complete sequence Length = 210224 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gatttgcaaataacacacaaa 143 ||||||||||||||||||||| Sbjct: 133937 gatttgcaaataacacacaaa 133917
>ref|NM_019610.3| Homo sapiens RNA binding motif protein, X-linked-like 1 (RBMXL1), mRNA Length = 3877 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 820 gctggaagaggaggaagtgga 840
>gb|AF039043.1| Caenorhabditis elegans cosmid F39C12, complete sequence Length = 40233 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 tggaagaggaggaagtggaag 279 ||||||||||||||||||||| Sbjct: 12184 tggaagaggaggaagtggaag 12164
>emb|AL139416.5| Human DNA sequence from clone RP4-531M19 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ32614), the gene for a novel protein similar to X-linked RNA binding motif protein (RBMX) (DKFZp547N1117), the 3' end of the GBP3 gene for guanylate binding protein 3 and a CpG island, complete sequence Length = 34250 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 6377 gctggaagaggaggaagtgga 6357
>emb|AL136167.8| Human DNA sequence from clone RP1-299I16 on chromosome Xq26.1-27.3 Contains part of the GPR112 gene for G protein-coupled receptor 112, complete sequence Length = 63946 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tacatttgcagtggatgtttt 106 ||||||||||||||||||||| Sbjct: 21026 tacatttgcagtggatgtttt 21046
>emb|AL832554.1|HSM803863 Homo sapiens mRNA; cDNA DKFZp547N1117 (from clone DKFZp547N1117) Length = 4857 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 800 gctggaagaggaggaagtgga 820
>emb|CR936801.1| Homo sapiens mRNA; cDNA DKFZp781E1948 (from clone DKFZp781E1948) Length = 8971 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tacatttgcagtggatgtttt 106 ||||||||||||||||||||| Sbjct: 468 tacatttgcagtggatgtttt 488
>ref|NM_076424.2| Caenorhabditis elegans F39C12.1 (F39C12.1) mRNA, complete cds Length = 15429 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaag 279 ||||||||||||||||||||| Sbjct: 4559 tggaagaggaggaagtggaag 4579
>gb|BC012942.1| Homo sapiens RNA binding motif protein, X-linked-like 1, mRNA (cDNA clone MGC:9398 IMAGE:3875565), complete cds Length = 3678 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 606 gctggaagaggaggaagtgga 626
>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence Length = 181804 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gatttgcaaataacacacaaa 143 ||||||||||||||||||||| Sbjct: 48620 gatttgcaaataacacacaaa 48640
>ref|NM_153834.3| Homo sapiens G protein-coupled receptor 112 (GPR112), mRNA Length = 9931 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tacatttgcagtggatgtttt 106 ||||||||||||||||||||| Sbjct: 1224 tacatttgcagtggatgtttt 1244
>gb|AY140954.1| Homo sapiens G-protein coupled receptor GPR112 (GPR112) mRNA, complete cds Length = 8400 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tacatttgcagtggatgtttt 106 ||||||||||||||||||||| Sbjct: 741 tacatttgcagtggatgtttt 761
>gb|AY882585.1| Homo sapiens G protein-coupled receptor 112 (GPR112) mRNA, complete cds Length = 9931 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 tacatttgcagtggatgtttt 106 ||||||||||||||||||||| Sbjct: 1224 tacatttgcagtggatgtttt 1244
>gb|DQ120655.1| Cercopithecus sabaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120654.1| Hylobates lar RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120653.1| Pongo pygmaeus RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120652.1| Gorilla gorilla RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120651.1| Pan troglodytes RBM1 gene, partial cds Length = 1155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>gb|DQ120650.1| Homo sapiens RBM1 gene, partial cds Length = 1152 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 gctggaagaggaggaagtgga 277 ||||||||||||||||||||| Sbjct: 331 gctggaagaggaggaagtgga 351
>ref|NM_106642.3| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.1 mRNA, complete cds Length = 2949 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 1649 tggaagaggaagaagttgaagttccggt 1676
>ref|NM_001036228.1| Arabidopsis thaliana HSP91 AT1G79930 (HSP91) transcript variant AT1G79930.2 mRNA, complete cds Length = 3012 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 1693 tggaagaggaagaagttgaagttccggt 1720
>gb|AY726636.1| Xenopus laevis Brg1 mRNA, complete cds Length = 5031 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 4682 ggaagaggaggaagtggaag 4701
>gb|BC106223.1| Xenopus laevis cDNA clone MGC:130651 IMAGE:7391671, complete cds Length = 1090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 agcaaaggtgagaaggctaa 196 |||||||||||||||||||| Sbjct: 581 agcaaaggtgagaaggctaa 600
>ref|XM_613004.2| PREDICTED: Bos taurus similar to UPF3 regulator of nonsense transcripts homolog B isoform 2 (LOC540761), mRNA Length = 1580 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ctaaactgaaagtgaaagtt 212 |||||||||||||||||||| Sbjct: 1332 ctaaactgaaagtgaaagtt 1313
>gb|AY723745.1| Hepatitis E virus isolate IND-SW-00-01, complete genome Length = 7262 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 catctatgagtgaggtgcca 308 |||||||||||||||||||| Sbjct: 3330 catctatgagtgaggtgcca 3311
>ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), mRNA Length = 5214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 3193 ggaagaggaggaagtggaag 3212
>gb|AY339371.1| Rattus norvegicus ASB15 mRNA, partial cds Length = 437 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gatcctgctgaggctgctgctgaa 392 |||| ||||||||||||||||||| Sbjct: 357 gatcatgctgaggctgctgctgaa 380
>emb|CT010522.7| Mouse DNA sequence from clone RP23-310H3 on chromosome 16, complete sequence Length = 169798 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 44260 aggtgagaaggctaaactga 44241
>gb|AC134834.3| Mus musculus BAC clone RP24-320P15 from chromosome 18, complete sequence Length = 169143 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 163888 ggaagaggaggaagtggaag 163869
>gb|AC138619.4| Mus musculus BAC clone RP23-278M16 from chromosome 18, complete sequence Length = 170250 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 53585 ggaagaggaggaagtggaag 53604
>gb|AC111103.7| Mus musculus chromosome 16, clone RP23-187G7, complete sequence Length = 222348 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 72549 aggtgagaaggctaaactga 72568
>gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 153084 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 acacagatgatttgcaaata 134 |||||||||||||||||||| Sbjct: 83958 acacagatgatttgcaaata 83939
>emb|AL354996.9| Human DNA sequence from clone RP11-478H12 on chromosome 13, complete sequence Length = 54981 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 34328 aggtgagaaggctaaactga 34347
>emb|Z70314.1|ATHSP91 A.thaliana mRNA for heat-shock protein Length = 2923 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 1652 tggaagaggaagaagttgaagttccggt 1679
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctctcttgaatcagcaacga 255 |||||||||||||||||||| Sbjct: 982990 ctctcttgaatcagcaacga 982971
>emb|BX927205.8| Zebrafish DNA sequence from clone CH211-118D21 in linkage group 12, complete sequence Length = 163503 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcccaacaaactgttgtatt 31 |||||||||||||||||||| Sbjct: 81977 tcccaacaaactgttgtatt 81958
>gb|BC097405.1| Rattus norvegicus similar to ankyrin repeat domain-containing SOCS box protein Asb-15, mRNA (cDNA clone IMAGE:7453988), partial cds Length = 1534 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gatcctgctgaggctgctgctgaa 392 |||| ||||||||||||||||||| Sbjct: 1352 gatcatgctgaggctgctgctgaa 1375
>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence Length = 174994 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ctcaacatccatgggatagt 235 |||||||||||||||||||| Sbjct: 115638 ctcaacatccatgggatagt 115657
>gb|AC104635.12| Homo sapiens 3 BAC RP11-567G11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 66672 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 27372 aggtgagaaggctaaactga 27353
>gb|AC010617.8| Homo sapiens chromosome 19 clone CTD-2607J13, complete sequence Length = 101166 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ctcaacatccatgggatagt 235 |||||||||||||||||||| Sbjct: 33935 ctcaacatccatgggatagt 33916
>gb|AC084768.4| Homo sapiens chromosome 8, clone RP11-281H11, complete sequence Length = 173677 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agaggaggaagtggaagttc 282 |||||||||||||||||||| Sbjct: 28378 agaggaggaagtggaagttc 28397
>ref|NM_169658.2| Drosophila melanogaster Ataxin-2 CG5166-RC, transcript variant C (Atx2), mRNA Length = 5020 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>ref|NM_169657.1| Drosophila melanogaster Ataxin-2 CG5166-RB, transcript variant B (Atx2), mRNA Length = 5690 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 2748 cctgctgaggctgctgctga 2729
>ref|NM_142209.2| Drosophila melanogaster Ataxin-2 CG5166-RA, transcript variant A (Atx2), mRNA Length = 5149 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence Length = 161054 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 32348 aggtgagaaggctaaactga 32367
>gb|AY095516.1| Drosophila melanogaster GH13857 full insert cDNA Length = 4303 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 2513 cctgctgaggctgctgctga 2494
>gb|AY079015.1| Arabidopsis thaliana At1g79930/F19K16_11 mRNA, complete cds Length = 2798 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 1649 tggaagaggaagaagttgaagttccggt 1676
>dbj|AK154720.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630104H16 product:sepiapterin reductase, full insert sequence Length = 3551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 3347 ggaagaggaggaagtggaag 3328
>gb|AC093581.2| Homo sapiens chromosome 1 clone RP11-22M7, complete sequence Length = 156992 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 77712 aggtgagaaggctaaactga 77693
>gb|AY058253.1| Drosophila melanogaster GH01409 full length cDNA Length = 4350 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 2078 cctgctgaggctgctgctga 2059
>dbj|AK077901.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030430B05 product:zinc finger homeobox 1a, full insert sequence Length = 1651 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 466 ggaagaggaggaagtggaag 485
>dbj|AK084643.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330024O10 product:unclassifiable, full insert sequence Length = 2469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 acacagatgatttgcaaata 134 |||||||||||||||||||| Sbjct: 1455 acacagatgatttgcaaata 1436
>gb|AY950549.1| Streptococcus pneumoniae strain 14893 penicillin binding protein (pbp2x) gene, partial cds Length = 1629 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 caatgcctagcatcaaggct 65 |||||||||||||||||||| Sbjct: 1394 caatgcctagcatcaaggct 1413
>gb|AY762376.1| Xenopus laevis Brg1 (Brg1) mRNA, complete cds Length = 5487 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 4695 ggaagaggaggaagtggaag 4714
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 73378 cctgctgaggctgctgctga 73359
>gb|AC159114.7| Mus musculus BAC RP23-370L19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169393 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 acacagatgatttgcaaata 134 |||||||||||||||||||| Sbjct: 131104 acacagatgatttgcaaata 131123
>gb|AC133183.3| Mus musculus BAC clone RP24-185O19 from chromosome 12, complete sequence Length = 182948 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 131545 ggaagaggaggaagtggaag 131526
>gb|AC004944.1|AC004944 Homo sapiens PAC clone RP5-991O23 from 8, complete sequence Length = 133258 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agaggaggaagtggaagttc 282 |||||||||||||||||||| Sbjct: 117230 agaggaggaagtggaagttc 117249
>ref|XM_216108.3| PREDICTED: Rattus norvegicus ankyrin repeat and SOCS box-containing protein 15 (Asb15), mRNA Length = 1313 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 369 gatcctgctgaggctgctgctgaa 392 |||| ||||||||||||||||||| Sbjct: 843 gatcatgctgaggctgctgctgaa 866
>gb|BT002625.1| Arabidopsis thaliana At1g79930/F19K16_11 gene, complete cds Length = 2496 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 1499 tggaagaggaagaagttgaagttccggt 1526
>gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, complete sequence Length = 200898 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 43101 aggtgagaaggctaaactga 43082
>gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, complete sequence Length = 195741 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 aggaaaaaactgttccaatg 431 |||||||||||||||||||| Sbjct: 90340 aggaaaaaactgttccaatg 90321
>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167311 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 40839 aggtgagaaggctaaactga 40858
>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete sequence Length = 116905 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 259 tggaagaggaggaagtggaagttccggt 286 |||||||||| ||||| ||||||||||| Sbjct: 1988 tggaagaggaagaagttgaagttccggt 1961
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 217716 cctgctgaggctgctgctga 217697
>emb|Z34801.1|CEF59A2 Caenorhabditis elegans Cosmid F59A2, complete sequence Length = 25400 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cacgagattctgaggaaaaa 419 |||||||||||||||||||| Sbjct: 4966 cacgagattctgaggaaaaa 4947
>gb|BT001340.1| Drosophila melanogaster AT22221 full insert cDNA Length = 3192 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 cctgctgaggctgctgctga 391 |||||||||||||||||||| Sbjct: 1555 cctgctgaggctgctgctga 1536
>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218409 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 40625 ggaagaggaggaagtggaag 40606
>emb|AL133224.4|CNS01DU9 Human chromosome 14 DNA sequence BAC R-16G17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187385 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aggtgagaaggctaaactga 201 |||||||||||||||||||| Sbjct: 97150 aggtgagaaggctaaactga 97131
>emb|AL935044.6| Zebrafish DNA sequence from clone CH211-190O19, complete sequence Length = 155612 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ctaaactgaaagtgaaagtt 212 |||||||||||||||||||| Sbjct: 61547 ctaaactgaaagtgaaagtt 61566
>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 229744 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 13634 ggaagaggaggaagtggaag 13653
>emb|AL611952.9| Mouse DNA sequence from clone RP23-70K18 on chromosome 4, complete sequence Length = 89500 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 26901 ggaagaggaggaagtggaag 26882
>gb|U26259.1|MMU26259 Mus musculus C2-H2 zinc finger protein mRNA, complete cds Length = 5237 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 3210 ggaagaggaggaagtggaag 3229
>dbj|D76432.1| Mouse mRNA for transcriptional repressor deltaEF1, complete cds Length = 5214 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 ggaagaggaggaagtggaag 279 |||||||||||||||||||| Sbjct: 3193 ggaagaggaggaagtggaag 3212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,341,900 Number of Sequences: 3902068 Number of extensions: 5341900 Number of successful extensions: 127218 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126944 Number of HSP's gapped (non-prelim): 259 length of query: 470 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 448 effective length of database: 17,147,199,772 effective search space: 7681945497856 effective search space used: 7681945497856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)