ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30d03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_477566.1| Oryza sativa (japonica cultivar-group), mRNA 658 0.0
2ref|XM_506269.1| PREDICTED Oryza sativa (japonica cultivar-group... 658 0.0
3dbj|AK059375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 658 0.0
4dbj|AK102836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 650 0.0
5gb|AY110156.1| Zea mays CL19935_1 mRNA sequence 611 e-171
6ref|NM_125739.2| Arabidopsis thaliana unknown protein AT5G63440 ... 127 5e-26
7dbj|AK118693.1| Arabidopsis thaliana At5g63440 mRNA for unknown ... 127 5e-26
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
9dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
10ref|NM_180925.1| Arabidopsis thaliana unknown protein AT5G63440 ... 92 3e-15
11gb|AY133627.1| Arabidopsis thaliana AT5g63440/MLE2_7 mRNA, compl... 92 3e-15
12gb|AF428410.1|AF428410 Arabidopsis thaliana AT5g63440/MLE2_7 mRN... 92 3e-15
13gb|BT013432.1| Lycopersicon esculentum clone 132072F, mRNA sequence 90 1e-14
14dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 68 4e-08
15gb|AY111948.1| Zea mays CL56048_1 mRNA sequence 64 6e-07
16gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3... 44 0.58
17gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3... 44 0.58
18gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, com... 42 2.3
19ref|XM_883092.1| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
20ref|XM_883086.1| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
21ref|XM_883082.1| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
22ref|XM_883078.1| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
23ref|XM_883074.1| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
24ref|XM_589593.2| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
25ref|XM_869962.1| PREDICTED: Bos taurus similar to CG3338-PA, tra... 42 2.3
26gb|AC007070.5| Arabidopsis thaliana chromosome 2 clone T22F11 ma... 42 2.3
27dbj|AK149300.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 42 2.3
28gb|AC133462.18| Mus musculus chromosome 1, clone RP24-441D8, com... 42 2.3
29gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, co... 42 2.3
30dbj|AP003151.1| Mus musculus genomic DNA, chromosome 16q clone:R... 42 2.3
31gb|AC173208.2| Mus musculus BAC clone RP24-335A2 from chromosome... 42 2.3
32gb|AY772454.1| Zea mays RFLP probe umc109 (CBM 9.01) genomic seq... 40 9.1
33gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, comp... 40 9.1
34gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, comp... 40 9.1
35gb|AC162380.4| Pan troglodytes BAC clone CH251-629G18 from chrom... 40 9.1
36gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, co... 40 9.1
37gb|AC123805.4| Mus musculus BAC clone RP24-150A12 from chromosom... 40 9.1
38gb|AE014075.1| Escherichia coli CFT073, complete genome 40 9.1
39gb|CP000243.1| Escherichia coli UTI89, complete genome 40 9.1
40emb|AL356962.8| Human DNA sequence from clone RP11-453C2 on chro... 40 9.1
41gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence 40 9.1
42gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosom... 40 9.1
43emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 9.1
44emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in ... 40 9.1
45gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, ... 40 9.1
46gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromo... 40 9.1
47gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromoso... 40 9.1
48gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid c... 40 9.1
49gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P... 40 9.1
50gb|AC003099.1| Homo sapiens chromosome 4, BAC clone B284B3, comp... 40 9.1
51emb|BX897717.4| Mouse DNA sequence from clone RP24-273F10 on chr... 40 9.1
52gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, co... 40 9.1
53emb|BX465839.8| Mouse DNA sequence from clone RP24-70F15 on chro... 40 9.1
54gb|AY956957.1| Staphylococcus sp. HPC 921 16S ribosomal RNA gene... 40 9.1
55gb|AY956944.1| Staphylococcus sp. HPC 908 16S ribosomal RNA gene... 40 9.1
56dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10,... 40 9.1
57emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 ... 40 9.1
58emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 40 9.1
59emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 i... 40 9.1
60gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Can... 40 9.1
61gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 ma... 40 9.1
62gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, co... 40 9.1
63emb|AL359218.4|CNS05TEG Human chromosome 14 DNA sequence BAC R-5... 40 9.1
64gb|AC002064.1|HSAC002064 Human BAC clone RG016J04 from 7q21, com... 40 9.1
65gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 9.1
66dbj|AP001821.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 9.1

>ref|XM_477566.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1081

 Score =  658 bits (332), Expect = 0.0
 Identities = 558/632 (88%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgatacc 61
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 239 ccgacctcttcgtctactactgcaag-cactgcgcctcccacgtcctcatcaccgatacc 297

                                                                       
Query: 62  ctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataagacaaag 121
           | |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| 
Sbjct: 298 caattgcagaaaatgccaaagaggaagactgacagagcacatgtactagacaagaaaaaa 357

                                                                       
Query: 122 catcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacgtggagaagga 181
           |||||  | ||||| |||||||| || ||||||||  || |||||||||| |||||||| 
Sbjct: 358 catctctcaaggctaaatgtgaaggaggcaggaaaggtcctgttgaaacggggagaaggg 417

                                                                       
Query: 182 aaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtttgctaccga 241
           || || |||||||||||||| ||||  ||  ||||||||| |||||| ||||| ||||||
Sbjct: 418 aagcttgaaaagcagttccgtatgagttgtttgggatgcggccttttcgtttgttaccga 477

                                                                       
Query: 242 tcggaggaagatttggagcttgctccttatatatatgttgttgatggagcactgagttct 301
           || || || || |||||||| ||||| |  ||||||||||||||||||||||| || || 
Sbjct: 478 tcagaagaggagttggagctagctccattcatatatgttgttgatggagcactaagctca 537

                                                                       
Query: 302 gtggcggctgagacaaatccacatgatgctcctgtacccccttgcattacacagttgcag 361
           ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||| | 
Sbjct: 538 gtggcggctgaaacaaatccacatgatgcacctgtaccaccttgcatcacacaattggaa 597

                                                                       
Query: 362 ggtggacttgtccaagttgccattgaagtagaagaccgagcacaacgttcagcaataaca 421
           ||||| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 598 ggtggccttgtccaagtagccattgaggttgaagaccgggcacaacggtcagcaataaca 657

                                                                       
Query: 422 agagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcc 481
           |||||||| ||||| |||||||||||| |||| ||||| ||||||||||| ||||| || 
Sbjct: 658 agagtgaatgctgatgatgttcgagtaacagttgctgctcctgctgctcgaggggaagca 717

                                                                       
Query: 482 aacaacgagttgctagaatttatgggcaaggtgcttggcttaagattgagtcagatgacc 541
           ||||||||  | ||||| || ||||||||||| |||||||||||| | ||||||||||||
Sbjct: 718 aacaacgaactactagagttcatgggcaaggttcttggcttaagactcagtcagatgacc 777

                                                                       
Query: 542 cttcaaaggggatggaataataaatcaaagcttctgattgttgaggatttgtctgcacga 601
           |||||||| |||||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 778 cttcaaagaggatggaataataagtcgaagcttctgattgttgaagatttgtcagcacgg 837

                                           
Query: 602 caagtttatgagaagctcctagaagctgtcca 633
           ||||| ||||||||||||||||||||||||||
Sbjct: 838 caagtgtatgagaagctcctagaagctgtcca 869



to top

>ref|XM_506269.1| PREDICTED Oryza sativa (japonica cultivar-group), B1120F06.103 mRNA
          Length = 1083

 Score =  658 bits (332), Expect = 0.0
 Identities = 558/632 (88%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgatacc 61
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 230 ccgacctcttcgtctactactgcaag-cactgcgcctcccacgtcctcatcaccgatacc 288

                                                                       
Query: 62  ctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataagacaaag 121
           | |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| 
Sbjct: 289 caattgcagaaaatgccaaagaggaagactgacagagcacatgtactagacaagaaaaaa 348

                                                                       
Query: 122 catcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacgtggagaagga 181
           |||||  | ||||| |||||||| || ||||||||  || |||||||||| |||||||| 
Sbjct: 349 catctctcaaggctaaatgtgaaggaggcaggaaaggtcctgttgaaacggggagaaggg 408

                                                                       
Query: 182 aaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtttgctaccga 241
           || || |||||||||||||| ||||  ||  ||||||||| |||||| ||||| ||||||
Sbjct: 409 aagcttgaaaagcagttccgtatgagttgtttgggatgcggccttttcgtttgttaccga 468

                                                                       
Query: 242 tcggaggaagatttggagcttgctccttatatatatgttgttgatggagcactgagttct 301
           || || || || |||||||| ||||| |  ||||||||||||||||||||||| || || 
Sbjct: 469 tcagaagaggagttggagctagctccattcatatatgttgttgatggagcactaagctca 528

                                                                       
Query: 302 gtggcggctgagacaaatccacatgatgctcctgtacccccttgcattacacagttgcag 361
           ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||| | 
Sbjct: 529 gtggcggctgaaacaaatccacatgatgcacctgtaccaccttgcatcacacaattggaa 588

                                                                       
Query: 362 ggtggacttgtccaagttgccattgaagtagaagaccgagcacaacgttcagcaataaca 421
           ||||| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 589 ggtggccttgtccaagtagccattgaggttgaagaccgggcacaacggtcagcaataaca 648

                                                                       
Query: 422 agagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcc 481
           |||||||| ||||| |||||||||||| |||| ||||| ||||||||||| ||||| || 
Sbjct: 649 agagtgaatgctgatgatgttcgagtaacagttgctgctcctgctgctcgaggggaagca 708

                                                                       
Query: 482 aacaacgagttgctagaatttatgggcaaggtgcttggcttaagattgagtcagatgacc 541
           ||||||||  | ||||| || ||||||||||| |||||||||||| | ||||||||||||
Sbjct: 709 aacaacgaactactagagttcatgggcaaggttcttggcttaagactcagtcagatgacc 768

                                                                       
Query: 542 cttcaaaggggatggaataataaatcaaagcttctgattgttgaggatttgtctgcacga 601
           |||||||| |||||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 769 cttcaaagaggatggaataataagtcgaagcttctgattgttgaagatttgtcagcacgg 828

                                           
Query: 602 caagtttatgagaagctcctagaagctgtcca 633
           ||||| ||||||||||||||||||||||||||
Sbjct: 829 caagtgtatgagaagctcctagaagctgtcca 860



to top

>dbj|AK059375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-F06, full
           insert sequence
          Length = 1081

 Score =  658 bits (332), Expect = 0.0
 Identities = 558/632 (88%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgatacc 61
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 239 ccgacctcttcgtctactactgcaag-cactgcgcctcccacgtcctcatcaccgatacc 297

                                                                       
Query: 62  ctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataagacaaag 121
           | |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| 
Sbjct: 298 caattgcagaaaatgccaaagaggaagactgacagagcacatgtactagacaagaaaaaa 357

                                                                       
Query: 122 catcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacgtggagaagga 181
           |||||  | ||||| |||||||| || ||||||||  || |||||||||| |||||||| 
Sbjct: 358 catctctcaaggctaaatgtgaaggaggcaggaaaggtcctgttgaaacggggagaaggg 417

                                                                       
Query: 182 aaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtttgctaccga 241
           || || |||||||||||||| ||||  ||  ||||||||| |||||| ||||| ||||||
Sbjct: 418 aagcttgaaaagcagttccgtatgagttgtttgggatgcggccttttcgtttgttaccga 477

                                                                       
Query: 242 tcggaggaagatttggagcttgctccttatatatatgttgttgatggagcactgagttct 301
           || || || || |||||||| ||||| |  ||||||||||||||||||||||| || || 
Sbjct: 478 tcagaagaggagttggagctagctccattcatatatgttgttgatggagcactaagctca 537

                                                                       
Query: 302 gtggcggctgagacaaatccacatgatgctcctgtacccccttgcattacacagttgcag 361
           ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||| | 
Sbjct: 538 gtggcggctgaaacaaatccacatgatgcacctgtaccaccttgcatcacacaattggaa 597

                                                                       
Query: 362 ggtggacttgtccaagttgccattgaagtagaagaccgagcacaacgttcagcaataaca 421
           ||||| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 598 ggtggccttgtccaagtagccattgaggttgaagaccgggcacaacggtcagcaataaca 657

                                                                       
Query: 422 agagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcc 481
           |||||||| ||||| |||||||||||| |||| ||||| ||||||||||| ||||| || 
Sbjct: 658 agagtgaatgctgatgatgttcgagtaacagttgctgctcctgctgctcgaggggaagca 717

                                                                       
Query: 482 aacaacgagttgctagaatttatgggcaaggtgcttggcttaagattgagtcagatgacc 541
           ||||||||  | ||||| || ||||||||||| |||||||||||| | ||||||||||||
Sbjct: 718 aacaacgaactactagagttcatgggcaaggttcttggcttaagactcagtcagatgacc 777

                                                                       
Query: 542 cttcaaaggggatggaataataaatcaaagcttctgattgttgaggatttgtctgcacga 601
           |||||||| |||||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 778 cttcaaagaggatggaataataagtcgaagcttctgattgttgaagatttgtcagcacgg 837

                                           
Query: 602 caagtttatgagaagctcctagaagctgtcca 633
           ||||| ||||||||||||||||||||||||||
Sbjct: 838 caagtgtatgagaagctcctagaagctgtcca 869



to top

>dbj|AK102836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109K02, full
           insert sequence
          Length = 1083

 Score =  650 bits (328), Expect = 0.0
 Identities = 557/632 (88%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgatacc 61
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 230 ccgacctcttcgtctactactgcaag-cactgcgcctcccacgtcctcatcaccgatacc 288

                                                                       
Query: 62  ctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataagacaaag 121
           | |||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| 
Sbjct: 289 caattgcagaaaatgccaaagaggaagactgacagagcacatgtactagacaagaaaaaa 348

                                                                       
Query: 122 catcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacgtggagaagga 181
           |||||  | ||||| |||||||| || ||||||||  || |||||||||| |||||||| 
Sbjct: 349 catctctcaaggctaaatgtgaaggaggcaggaaaggtcctgttgaaacggggagaaggg 408

                                                                       
Query: 182 aaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtttgctaccga 241
           || || |||||||||||||| ||||  ||  ||||||||| |||||| ||||| ||||||
Sbjct: 409 aagcttgaaaagcagttccgtatgagttgtttgggatgcggccttttcgtttgttaccga 468

                                                                       
Query: 242 tcggaggaagatttggagcttgctccttatatatatgttgttgatggagcactgagttct 301
           || || || || |||||||| ||||| |  ||||||||||||||||||||||| || || 
Sbjct: 469 tcagaagaggagttggagctagctccattcatatatgttgttgatggagcactaagctca 528

                                                                       
Query: 302 gtggcggctgagacaaatccacatgatgctcctgtacccccttgcattacacagttgcag 361
           ||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| ||| | 
Sbjct: 529 gtggcggctgaaacaaatccacatgatgcacctgtaccaccttgcatcacacaattggaa 588

                                                                       
Query: 362 ggtggacttgtccaagttgccattgaagtagaagaccgagcacaacgttcagcaataaca 421
           ||||| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||||
Sbjct: 589 ggtggccttgtccaagtagccattgaggttgaagaccgggcacaacggtcagcaataaca 648

                                                                       
Query: 422 agagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcc 481
           |||||||| ||||  |||||||||||| |||| ||||| ||||||||||| ||||| || 
Sbjct: 649 agagtgaatgctggtgatgttcgagtaacagttgctgctcctgctgctcgaggggaagca 708

                                                                       
Query: 482 aacaacgagttgctagaatttatgggcaaggtgcttggcttaagattgagtcagatgacc 541
           ||||||||  | ||||| || ||||||||||| |||||||||||| | ||||||||||||
Sbjct: 709 aacaacgaactactagagttcatgggcaaggttcttggcttaagactcagtcagatgacc 768

                                                                       
Query: 542 cttcaaaggggatggaataataaatcaaagcttctgattgttgaggatttgtctgcacga 601
           |||||||| |||||||||||||| || ||||||||||||||||| |||||||| ||||| 
Sbjct: 769 cttcaaagaggatggaataataagtcgaagcttctgattgttgaagatttgtcagcacgg 828

                                           
Query: 602 caagtttatgagaagctcctagaagctgtcca 633
           ||||| ||||||||||||||||||||||||||
Sbjct: 829 caagtgtatgagaagctcctagaagctgtcca 860



to top

>gb|AY110156.1| Zea mays CL19935_1 mRNA sequence
          Length = 1173

 Score =  611 bits (308), Expect = e-171
 Identities = 553/635 (87%), Gaps = 1/635 (0%)
 Strand = Plus / Minus

                                                                       
Query: 2   ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgatacc 61
           ||||||| ||||| |||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct: 965 ccgaccttttcgtatactactgcaag-cactgcgcctcacatgtcctcatcaccgatacc 907

                                                                       
Query: 62  ctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataagacaaag 121
           | ||||||||||||||| ||| | |||||||||||| |||||||| |||| ||| | |||
Sbjct: 906 caattgcagaaaatgcccaagcgaaagactgacagaacacatgttttagacaaggctaag 847

                                                                       
Query: 122 catcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacgtggagaagga 181
           |||||| | ||||| ||||| || || ||||||||| |  ||||||||||||| ||||||
Sbjct: 846 catctttcaaggctaaatgttaaggaggcaggaaaagtaatgttgaaacgtggtgaagga 787

                                                                       
Query: 182 aaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtttgctaccga 241
           || || ||||||||||| ||||||| ||| |||||||| ||||     ||||| ||||||
Sbjct: 786 aagcttgaaaagcagtttcgcatgagctgtgtgggatgtgaccnnnnngtttgttaccga 727

                                                                       
Query: 242 tcggaggaagatttggagcttgctccttatatatatgttgttgatggagcactgagttct 301
           || || || ||| ||||| |||| ||||  ||||| ||| |||| |||||||||||||| 
Sbjct: 726 tcagaagaggatctggaggttgcccctttcatatacgttattgacggagcactgagttca 667

                                                                       
Query: 302 gtggcggctgagacaaatccacatgatgctcctgtacccccttgcattacacagttgcag 361
           || || |||||||||||||||||||||||||||||||| |||||||| |||||  || | 
Sbjct: 666 gttgctgctgagacaaatccacatgatgctcctgtacctccttgcatcacacaactggaa 607

                                                                       
Query: 362 ggtggacttgtccaagttgccattgaagtagaagaccgagcacaacgttcagcaataaca 421
           |||||| |||||||||| ||||||||||| |||||||| ||||||||||||||| |||||
Sbjct: 606 ggtggagttgtccaagtagccattgaagtggaagaccgggcacaacgttcagcagtaaca 547

                                                                       
Query: 422 agagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcc 481
           |||||||| ||||| || ||||||||| | |||||||||| ||||||||| ||||| || 
Sbjct: 546 agagtgaatgctgatgacgttcgagtaacggtagctgcccttgctgctcgaggggaagct 487

                                                                       
Query: 482 aacaacgagttgctagaatttatgggcaaggtgcttggcttaagattgagtcagatgacc 541
           ||||  |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||
Sbjct: 486 aacagtgagttgctagaatttatgggcaaggttcttggcctaagattgactcagatgacc 427

                                                                       
Query: 542 cttcaaaggggatggaataataaatcaaagcttctgattgttgaggatttgtctgcacga 601
           |||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||||| 
Sbjct: 426 cttcaaagaggatggaataacaaatcgaagcttctaattgttgaggatttgtctgcacgg 367

                                              
Query: 602 caagtttatgagaagctcctagaagctgtccaacc 636
           ||||| ||||||||||||||||||||||| |||||
Sbjct: 366 caagtgtatgagaagctcctagaagctgtacaacc 332



to top

>ref|NM_125739.2| Arabidopsis thaliana unknown protein AT5G63440 transcript variant
           AT5G63440.2 mRNA, complete cds
          Length = 944

 Score =  127 bits (64), Expect = 5e-26
 Identities = 271/340 (79%)
 Strand = Plus / Plus

                                                                       
Query: 279 ttgttgatggagcactgagttctgtggcggctgagacaaatccacatgatgctcctgtac 338
           |||||||||||||||| ||| |||| || || || || || ||||| ||||| || ||||
Sbjct: 373 ttgttgatggagcacttagtgctgttgctgcagaaaccaacccacaggatgcaccagtac 432

                                                                       
Query: 339 ccccttgcattacacagttgcagggtggacttgtccaagttgccattgaagtagaagacc 398
           | || |||||| ||||  |  | ||||||||||| || ||||| || ||||| |||||||
Sbjct: 433 ctccctgcatttcacaactcgacggtggacttgttcaggttgcaatagaagtggaagacc 492

                                                                       
Query: 399 gagcacaacgttcagcaataacaagagtgaacgctgacgatgttcgagtagcagtagctg 458
           | ||||||||||||||||| ||||| || || ||||| |||||||| ||  | || ||||
Sbjct: 493 gtgcacaacgttcagcaatcacaagggtaaatgctgatgatgttcgtgtgactgttgctg 552

                                                                       
Query: 459 cccctgctgctcggggggaggccaacaacgagttgctagaatttatgggcaaggtgcttg 518
           | || || || || ||||| || ||||||||| | || ||||| ||||| | ||| ||||
Sbjct: 553 caccagcagcccgtggggaagctaacaacgagcttctggaattcatgggaagggttcttg 612

                                                                       
Query: 519 gcttaagattgagtcagatgacccttcaaaggggatggaataataaatcaaagcttctga 578
           | ||||| ||||| |||||||| || ||||| || |||||||  |||||||| || ||  
Sbjct: 613 gtttaaggttgagccagatgactctccaaagaggttggaatagcaaatcaaaactcctcg 672

                                                   
Query: 579 ttgttgaggatttgtctgcacgacaagtttatgagaagct 618
           | || |||||||| || ||  ||||||| |||||||||||
Sbjct: 673 tggtcgaggatttatcagctagacaagtgtatgagaagct 712



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgataccctatt 66
           |||||||| |||||||||||  ||||| |  || || ||||| ||||| |||||||  ||
Sbjct: 102 ctcttcgtatactactgcaa-acactgtggttctcatgtccttatcactgatacccagtt 160

                                         
Query: 67  gcagaaaatgccaaagaggaagactgacag 96
           |||||| |||||||| |||||||| |||||
Sbjct: 161 gcagaagatgccaaaaaggaagaccgacag 190



to top

>dbj|AK118693.1| Arabidopsis thaliana At5g63440 mRNA for unknown protein, complete
           cds, clone: RAFL19-95-P15
          Length = 943

 Score =  127 bits (64), Expect = 5e-26
 Identities = 271/340 (79%)
 Strand = Plus / Plus

                                                                       
Query: 279 ttgttgatggagcactgagttctgtggcggctgagacaaatccacatgatgctcctgtac 338
           |||||||||||||||| ||| |||| || || || || || ||||| ||||| || ||||
Sbjct: 373 ttgttgatggagcacttagtgctgttgctgcagaaaccaacccacaggatgcaccagtac 432

                                                                       
Query: 339 ccccttgcattacacagttgcagggtggacttgtccaagttgccattgaagtagaagacc 398
           | || |||||| ||||  |  | ||||||||||| || ||||| || ||||| |||||||
Sbjct: 433 ctccctgcatttcacaactcgacggtggacttgttcaggttgcaatagaagtggaagacc 492

                                                                       
Query: 399 gagcacaacgttcagcaataacaagagtgaacgctgacgatgttcgagtagcagtagctg 458
           | ||||||||||||||||| ||||| || || ||||| |||||||| ||  | || ||||
Sbjct: 493 gtgcacaacgttcagcaatcacaagggtaaatgctgatgatgttcgtgtgactgttgctg 552

                                                                       
Query: 459 cccctgctgctcggggggaggccaacaacgagttgctagaatttatgggcaaggtgcttg 518
           | || || || || ||||| || ||||||||| | || ||||| ||||| | ||| ||||
Sbjct: 553 caccagcagcccgtggggaagctaacaacgagcttctggaattcatgggaagggttcttg 612

                                                                       
Query: 519 gcttaagattgagtcagatgacccttcaaaggggatggaataataaatcaaagcttctga 578
           | ||||| ||||| |||||||| || ||||| || |||||||  |||||||| || ||  
Sbjct: 613 gtttaaggttgagccagatgactctccaaagaggttggaatagcaaatcaaaactcctcg 672

                                                   
Query: 579 ttgttgaggatttgtctgcacgacaagtttatgagaagct 618
           | || |||||||| || ||  ||||||| |||||||||||
Sbjct: 673 tggtcgaggatttatcagctagacaagtgtatgagaagct 712



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgataccctatt 66
           |||||||| |||||||||||  ||||| |  || || ||||| ||||| |||||||  ||
Sbjct: 102 ctcttcgtatactactgcaa-acactgtggttctcatgtccttatcactgatacccagtt 160

                                         
Query: 67  gcagaaaatgccaaagaggaagactgacag 96
           |||||| |||||||| |||||||| |||||
Sbjct: 161 gcagaagatgccaaaaaggaagaccgacag 190



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  123 bits (62), Expect = 8e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                            
Query: 173      ggagaaggaaaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtt 232
                |||||||| || || |||||||||||||| ||||  ||  ||||||||| |||||| |||
Sbjct: 11547390 ggagaagggaagcttgaaaagcagttccgtatgagttgtttgggatgcggccttttcgtt 11547331

                                                                            
Query: 233      tgctaccgatcggaggaagatttggagcttgctccttatatatatgttgttgatggagca 292
                || |||||||| || || || |||||||| ||||| |  |||||||||||||||||||||
Sbjct: 11547330 tgttaccgatcagaagaggagttggagctagctccattcatatatgttgttgatggagca 11547271

                                                  
Query: 293      ctgagttctgtggcggctgagacaaatccacatg 326
                || || || ||||||||||| |||||||||||||
Sbjct: 11547270 ctaagctcagtggcggctgaaacaaatccacatg 11547237



 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 56       gataccctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataag 115
                ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 11548410 gatacccaattgcagaaaatgccaaagaggaagactgacagagcacatgtactagacaag 11548351

                                                                        
Query: 116      acaaagcatcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacg 171
                | ||| |||||  | ||||| |||||||| || ||||||||  || ||||||||||
Sbjct: 11548350 aaaaaacatctctcaaggctaaatgtgaaggaggcaggaaaggtcctgttgaaacg 11548295



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                            
Query: 326      gatgctcctgtacccccttgcattacacagttgcagggtggacttgtccaagttgccatt 385
                ||||| |||||||| |||||||| ||||| ||| | ||||| ||||||||||| ||||||
Sbjct: 11547142 gatgcacctgtaccaccttgcatcacacaattggaaggtggccttgtccaagtagccatt 11547083

                                                      
Query: 386      gaagtagaagaccgagcacaacgttcagcaataacaag 423
                || || |||||||| |||||||| ||||||||||||||
Sbjct: 11547082 gaggttgaagaccgggcacaacggtcagcaataacaag 11547045



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 510      aggtgcttggcttaagattgagtcagatgacccttcaaaggggatggaataataaatcaa 569
                |||| |||||||||||| | |||||||||||||||||||| |||||||||||||| || |
Sbjct: 11546620 aggttcttggcttaagactcagtcagatgacccttcaaagaggatggaataataagtcga 11546561

                             
Query: 570      agcttctgattgt 582
                |||||||||||||
Sbjct: 11546560 agcttctgattgt 11546548



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 54/55 (98%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                       
Query: 2        ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccg 56
                |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 11550049 ccgacctcttcgtctactactgcaag-cactgcgcctcccacgtcctcatcaccg 11549996



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                            
Query: 423      gagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcca 482
                ||||||| ||||| |||||||||||| |||| ||||| ||||||||||| ||||| || |
Sbjct: 11546865 gagtgaatgctgatgatgttcgagtaacagttgctgctcctgctgctcgaggggaagcaa 11546806

                                                
Query: 483      acaacgagttgctagaatttatgggcaaggtg 514
                |||||||  | ||||| || ||||||||||||
Sbjct: 11546805 acaacgaactactagagttcatgggcaaggtg 11546774



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                     
Query: 581      gttgaggatttgtctgcacgacaagtttatgagaagctcctagaagctgtcca 633
                ||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 11546466 gttgaagatttgtcagcacggcaagtgtatgagaagctcctagaagctgtcca 11546414



to top

>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score =  123 bits (62), Expect = 8e-25
 Identities = 131/154 (85%)
 Strand = Plus / Minus

                                                                          
Query: 173    ggagaaggaaaactcgaaaagcagttccgcatgacctgcgtgggatgcgacctttttgtt 232
              |||||||| || || |||||||||||||| ||||  ||  ||||||||| |||||| |||
Sbjct: 111048 ggagaagggaagcttgaaaagcagttccgtatgagttgtttgggatgcggccttttcgtt 110989

                                                                          
Query: 233    tgctaccgatcggaggaagatttggagcttgctccttatatatatgttgttgatggagca 292
              || |||||||| || || || |||||||| ||||| |  |||||||||||||||||||||
Sbjct: 110988 tgttaccgatcagaagaggagttggagctagctccattcatatatgttgttgatggagca 110929

                                                
Query: 293    ctgagttctgtggcggctgagacaaatccacatg 326
              || || || ||||||||||| |||||||||||||
Sbjct: 110928 ctaagctcagtggcggctgaaacaaatccacatg 110895



 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                          
Query: 56     gataccctattgcagaaaatgccaaagaggaagactgacagagcacatgttctagataag 115
              ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 112068 gatacccaattgcagaaaatgccaaagaggaagactgacagagcacatgtactagacaag 112009

                                                                      
Query: 116    acaaagcatcttgcgaggctgaatgtgaaagatgcaggaaaaatcttgttgaaacg 171
              | ||| |||||  | ||||| |||||||| || ||||||||  || ||||||||||
Sbjct: 112008 aaaaaacatctctcaaggctaaatgtgaaggaggcaggaaaggtcctgttgaaacg 111953



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 86/98 (87%)
 Strand = Plus / Minus

                                                                          
Query: 326    gatgctcctgtacccccttgcattacacagttgcagggtggacttgtccaagttgccatt 385
              ||||| |||||||| |||||||| ||||| ||| | ||||| ||||||||||| ||||||
Sbjct: 110800 gatgcacctgtaccaccttgcatcacacaattggaaggtggccttgtccaagtagccatt 110741

                                                    
Query: 386    gaagtagaagaccgagcacaacgttcagcaataacaag 423
              || || |||||||| |||||||| ||||||||||||||
Sbjct: 110740 gaggttgaagaccgggcacaacggtcagcaataacaag 110703



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                          
Query: 510    aggtgcttggcttaagattgagtcagatgacccttcaaaggggatggaataataaatcaa 569
              |||| |||||||||||| | |||||||||||||||||||| |||||||||||||| || |
Sbjct: 110278 aggttcttggcttaagactcagtcagatgacccttcaaagaggatggaataataagtcga 110219

                           
Query: 570    agcttctgattgt 582
              |||||||||||||
Sbjct: 110218 agcttctgattgt 110206



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 54/55 (98%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                     
Query: 2      ccgacctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccg 56
              |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 113707 ccgacctcttcgtctactactgcaag-cactgcgcctcccacgtcctcatcaccg 113654



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                          
Query: 423    gagtgaacgctgacgatgttcgagtagcagtagctgcccctgctgctcggggggaggcca 482
              ||||||| ||||| |||||||||||| |||| ||||| ||||||||||| ||||| || |
Sbjct: 110523 gagtgaatgctgatgatgttcgagtaacagttgctgctcctgctgctcgaggggaagcaa 110464

                                              
Query: 483    acaacgagttgctagaatttatgggcaaggtg 514
              |||||||  | ||||| || ||||||||||||
Sbjct: 110463 acaacgaactactagagttcatgggcaaggtg 110432



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                   
Query: 581    gttgaggatttgtctgcacgacaagtttatgagaagctcctagaagctgtcca 633
              ||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct: 110124 gttgaagatttgtcagcacggcaagtgtatgagaagctcctagaagctgtcca 110072



to top

>ref|NM_180925.1| Arabidopsis thaliana unknown protein AT5G63440 transcript variant
           AT5G63440.1 mRNA, complete cds
          Length = 1090

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                       
Query: 279 ttgttgatggagcactgagttctgtggcggctgagacaaatccacatgatgctcctgtac 338
           |||||||||||||||| ||| |||| || || || || || ||||| ||||| || ||||
Sbjct: 373 ttgttgatggagcacttagtgctgttgctgcagaaaccaacccacaggatgcaccagtac 432

                                                                       
Query: 339 ccccttgcattacacagttgcagggtggacttgtccaagttgccattgaagtagaagacc 398
           | || |||||| ||||  |  | ||||||||||| || ||||| || ||||| |||||||
Sbjct: 433 ctccctgcatttcacaactcgacggtggacttgttcaggttgcaatagaagtggaagacc 492

                                                         
Query: 399 gagcacaacgttcagcaataacaagagtgaacgctgacgatgttcg 444
           | ||||||||||||||||| ||||| || || ||||| ||||||||
Sbjct: 493 gtgcacaacgttcagcaatcacaagggtaaatgctgatgatgttcg 538



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgataccctatt 66
           |||||||| |||||||||||  ||||| |  || || ||||| ||||| |||||||  ||
Sbjct: 102 ctcttcgtatactactgcaa-acactgtggttctcatgtccttatcactgatacccagtt 160

                                         
Query: 67  gcagaaaatgccaaagaggaagactgacag 96
           |||||| |||||||| |||||||| |||||
Sbjct: 161 gcagaagatgccaaaaaggaagaccgacag 190



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                       
Query: 510 aggtgcttggcttaagattgagtcagatgacccttcaaaggggatggaataataaatcaa 569
           |||| ||||| ||||| ||||| |||||||| || ||||| || |||||||  |||||||
Sbjct: 732 aggttcttggtttaaggttgagccagatgactctccaaagaggttggaatagcaaatcaa 791

                                                            
Query: 570 agcttctgattgttgaggatttgtctgcacgacaagtttatgagaagct 618
           | || ||  | || |||||||| || ||  ||||||| |||||||||||
Sbjct: 792 aactcctcgtggtcgaggatttatcagctagacaagtgtatgagaagct 840



to top

>gb|AY133627.1| Arabidopsis thaliana AT5g63440/MLE2_7 mRNA, complete cds
          Length = 618

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                       
Query: 279 ttgttgatggagcactgagttctgtggcggctgagacaaatccacatgatgctcctgtac 338
           |||||||||||||||| ||| |||| || || || || || ||||| ||||| || ||||
Sbjct: 338 ttgttgatggagcacttagtgctgttgctgcagaaaccaacccacaggatgcaccagtac 397

                                                                       
Query: 339 ccccttgcattacacagttgcagggtggacttgtccaagttgccattgaagtagaagacc 398
           | || |||||| ||||  |  | ||||||||||| || ||||| || ||||| |||||||
Sbjct: 398 ctccctgcatttcacaactcgacggtggacttgttcaggttgcaatagaagtggaagacc 457

                                                         
Query: 399 gagcacaacgttcagcaataacaagagtgaacgctgacgatgttcg 444
           | ||||||||||||||||| ||||| || || ||||| ||||||||
Sbjct: 458 gtgcacaacgttcagcaatcacaagggtaaatgctgatgatgttcg 503



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgataccctatt 66
           |||||||| |||||||||||  ||||| |  || || ||||| ||||| |||||||  ||
Sbjct: 67  ctcttcgtatactactgcaa-acactgtggttctcatgtccttatcactgatacccagtt 125

                                         
Query: 67  gcagaaaatgccaaagaggaagactgacag 96
           |||||| |||||||| |||||||| |||||
Sbjct: 126 gcagaagatgccaaaaaggaagaccgacag 155



to top

>gb|AF428410.1|AF428410 Arabidopsis thaliana AT5g63440/MLE2_7 mRNA, complete cds
          Length = 1091

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 136/166 (81%)
 Strand = Plus / Plus

                                                                       
Query: 279 ttgttgatggagcactgagttctgtggcggctgagacaaatccacatgatgctcctgtac 338
           |||||||||||||||| ||| |||| || || || || || ||||| ||||| || ||||
Sbjct: 373 ttgttgatggagcacttagtgctgttgctgcagaaaccaacccacaggatgcaccagtac 432

                                                                       
Query: 339 ccccttgcattacacagttgcagggtggacttgtccaagttgccattgaagtagaagacc 398
           | || |||||| ||||  |  | ||||||||||| || ||||| || ||||| |||||||
Sbjct: 433 ctccctgcatttcacaactcgacggtggacttgttcaggttgcaatagaagtggaagacc 492

                                                         
Query: 399 gagcacaacgttcagcaataacaagagtgaacgctgacgatgttcg 444
           | ||||||||||||||||| ||||| || || ||||| ||||||||
Sbjct: 493 gtgcacaacgttcagcaatcacaagggtaaatgctgatgatgttcg 538



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctcttcgtctactactgcaagncactgcgcctcccacgtcctcatcaccgataccctatt 66
           |||||||| |||||||||||  ||||| |  || || ||||| ||||| |||||||  ||
Sbjct: 102 ctcttcgtatactactgcaa-acactgtggttctcatgtccttatcactgatacccagtt 160

                                         
Query: 67  gcagaaaatgccaaagaggaagactgacag 96
           |||||| |||||||| |||||||| |||||
Sbjct: 161 gcagaagatgccaaaaaggaagaccgacag 190



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                       
Query: 510 aggtgcttggcttaagattgagtcagatgacccttcaaaggggatggaataataaatcaa 569
           |||| ||||| ||||| ||||| |||||||| || ||||| || |||||||  |||||||
Sbjct: 732 aggttcttggtttaaggttgagccagatgactctccaaagaggttggaatagcaaatcaa 791

                                                            
Query: 570 agcttctgattgttgaggatttgtctgcacgacaagtttatgagaagct 618
           | || ||  | || |||||||| || ||  ||||||| |||||||||||
Sbjct: 792 aactcctcgtggtcgaggatttatcagctagacaagtgtatgagaagct 840



to top

>gb|BT013432.1| Lycopersicon esculentum clone 132072F, mRNA sequence
          Length = 2028

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 141/173 (81%)
 Strand = Plus / Plus

                                                                        
Query: 272  atatatgttgttgatggagcactgagttctgtggcggctgagacaaatccacatgatgct 331
            |||||||| |||||||| ||||| ||  || | |||||||||||||||||||| ||||||
Sbjct: 1143 atatatgtagttgatggggcacttagcactattgcggctgagacaaatccacaggatgct 1202

                                                                        
Query: 332  cctgtacccccttgcattacacagttgcagggtggacttgtccaagttgccattgaagta 391
            |||||||| || || ||  |||||||  | ||||| ||||| ||||| || || ||||| 
Sbjct: 1203 cctgtaccaccatgtatatcacagttagaaggtggccttgtgcaagtggcgatagaagtc 1262

                                                                 
Query: 392  gaagaccgagcacaacgttcagcaataacaagagtgaacgctgacgatgttcg 444
            || ||||| || || || || ||||| ||||||||||| || || ||||||||
Sbjct: 1263 gaggaccgtgcccagcggtctgcaattacaagagtgaatgcagatgatgttcg 1315



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 532  tcagatgacccttcaaaggggatggaataataaatcaaagcttct 576
            ||||||||| || ||||| ||||||||||  ||||||||||||||
Sbjct: 1403 tcagatgactctccaaagaggatggaatagcaaatcaaagcttct 1447



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 64  attgcagaaaatgccaaagaggaa 87
           |||||||||||||||||| |||||
Sbjct: 935 attgcagaaaatgccaaaaaggaa 958



to top

>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2
          Length = 58527

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                         
Query: 362   ggtggacttgtccaagttgccattgaagtagaagaccgagcacaacgttcagcaataaca 421
             ||||||||||| || ||||| || ||||| |||||||| ||||||||||||||||| |||
Sbjct: 19148 ggtggacttgttcaggttgcaatagaagtggaagaccgtgcacaacgttcagcaatcaca 19207

               
Query: 422   ag 423
             ||
Sbjct: 19208 ag 19209



to top

>gb|AY111948.1| Zea mays CL56048_1 mRNA sequence
          Length = 1233

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 581 gttgaggatttgtctgcacgacaagtttatgagaagctcctagaagctgtccaacc 636
           ||||||||||||||| ||| ||||||  |||| ||||||||||||||||| |||||
Sbjct: 375 gttgaggatttgtctacacaacaagtgaatgataagctcctagaagctgtacaacc 320



to top

>gb|AC066590.5| Homo sapiens chromosome 3 clone RP11-324K11 map 3p, complete sequence
          Length = 185895

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 82    gaggaagactgacagagcacat 103
             ||||||||||||||||||||||
Sbjct: 61461 gaggaagactgacagagcacat 61482



to top

>gb|AC087857.3| Homo sapiens chromosome 3 clone RP11-149E15 map 3p, complete sequence
          Length = 173606

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 82     gaggaagactgacagagcacat 103
              ||||||||||||||||||||||
Sbjct: 129617 gaggaagactgacagagcacat 129638



to top

>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence
          Length = 184094

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    atggagcactgagttctgtgg 305
              |||||||||||||||||||||
Sbjct: 174917 atggagcactgagttctgtgg 174937



to top

>ref|XM_883092.1| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 7
            (LOC512144), mRNA
          Length = 3242

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    gccgacctcttcgtctactac 21
            |||||||||||||||||||||
Sbjct: 1422 gccgacctcttcgtctactac 1442



to top

>ref|XM_883086.1| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 6
            (LOC512144), mRNA
          Length = 3155

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    gccgacctcttcgtctactac 21
            |||||||||||||||||||||
Sbjct: 1335 gccgacctcttcgtctactac 1355



to top

>ref|XM_883082.1| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 5
           (LOC512144), mRNA
          Length = 2708

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   gccgacctcttcgtctactac 21
           |||||||||||||||||||||
Sbjct: 888 gccgacctcttcgtctactac 908



to top

>ref|XM_883078.1| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 4
            (LOC512144), mRNA
          Length = 2600

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    gccgacctcttcgtctactac 21
            |||||||||||||||||||||
Sbjct: 1419 gccgacctcttcgtctactac 1439



to top

>ref|XM_883074.1| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 3
           (LOC512144), mRNA
          Length = 2202

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   gccgacctcttcgtctactac 21
           |||||||||||||||||||||
Sbjct: 382 gccgacctcttcgtctactac 402



to top

>ref|XM_589593.2| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 1
            (LOC512144), mRNA
          Length = 2059

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    gccgacctcttcgtctactac 21
            |||||||||||||||||||||
Sbjct: 1379 gccgacctcttcgtctactac 1399



to top

>ref|XM_869962.1| PREDICTED: Bos taurus similar to CG3338-PA, transcript variant 2
            (LOC512144), mRNA
          Length = 3239

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    gccgacctcttcgtctactac 21
            |||||||||||||||||||||
Sbjct: 1419 gccgacctcttcgtctactac 1439



to top

>gb|AC007070.5| Arabidopsis thaliana chromosome 2 clone T22F11 map GPA1, complete
             sequence
          Length = 86017

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 139   tgtgaaagatgcaggaaaaat 159
             |||||||||||||||||||||
Sbjct: 36577 tgtgaaagatgcaggaaaaat 36597



to top

>dbj|AK149300.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930015N16 product:unclassifiable, full insert
           sequence
          Length = 2380

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 80  aagaggaagactgacagagca 100
           |||||||||||||||||||||
Sbjct: 614 aagaggaagactgacagagca 634



to top

>gb|AC133462.18| Mus musculus chromosome 1, clone RP24-441D8, complete sequence
          Length = 140132

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   atggagcactgagttctgtgg 305
             |||||||||||||||||||||
Sbjct: 17694 atggagcactgagttctgtgg 17714



to top

>gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, complete sequence
          Length = 250096

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     gccaaagaggaagactgacag 96
              |||||||||||||||||||||
Sbjct: 152530 gccaaagaggaagactgacag 152510



to top

>dbj|AP003151.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-340N5, complete
             sequences
          Length = 160143

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    aagaggaagactgacagagca 100
             |||||||||||||||||||||
Sbjct: 57905 aagaggaagactgacagagca 57925



to top

>gb|AC173208.2| Mus musculus BAC clone RP24-335A2 from chromosome 16, complete sequence
          Length = 234813

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     aagaggaagactgacagagca 100
              |||||||||||||||||||||
Sbjct: 203320 aagaggaagactgacagagca 203340



to top

>gb|AY772454.1| Zea mays RFLP probe umc109 (CBM 9.01) genomic sequence
          Length = 797

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  actgcgcctcccacgtcctc 49
           ||||||||||||||||||||
Sbjct: 645 actgcgcctcccacgtcctc 664



to top

>gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, complete sequence
          Length = 218847

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 105    ttctagataagacaaagcatcttg 128
              |||||||||||||| |||||||||
Sbjct: 189630 ttctagataagacacagcatcttg 189653



to top

>gb|AC146029.4| Pan troglodytes BAC clone RP43-124D5 from 7, complete sequence
          Length = 190776

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    tgtgaaagatgcaggaaaaa 158
              ||||||||||||||||||||
Sbjct: 155185 tgtgaaagatgcaggaaaaa 155204



to top

>gb|AC162380.4| Pan troglodytes BAC clone CH251-629G18 from chromosome 7, complete
              sequence
          Length = 210978

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    tgtgaaagatgcaggaaaaa 158
              ||||||||||||||||||||
Sbjct: 116134 tgtgaaagatgcaggaaaaa 116115



to top

>gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, complete sequence
          Length = 206675

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  tgtgaaagatgcaggaaaaa 158
            ||||||||||||||||||||
Sbjct: 7705 tgtgaaagatgcaggaaaaa 7724



to top

>gb|AC123805.4| Mus musculus BAC clone RP24-150A12 from chromosome 7, complete sequence
          Length = 160666

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   aggctgaatgtgaaagatgc 150
             ||||||||||||||||||||
Sbjct: 14561 aggctgaatgtgaaagatgc 14580



to top

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     gggcaaggtgcttggcttaa 524
               ||||||||||||||||||||
Sbjct: 1823540 gggcaaggtgcttggcttaa 1823559



to top

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 505     gggcaaggtgcttggcttaa 524
               ||||||||||||||||||||
Sbjct: 1703336 gggcaaggtgcttggcttaa 1703355



to top

>emb|AL356962.8| Human DNA sequence from clone RP11-453C2 on chromosome 6 Contains the
             5' end of the IMPG1 gene for interphotoreceptor matrix
             proteoglycan 1, complete sequence
          Length = 186301

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 491   ttgctagaatttatgggcaaggtgcttggctt 522
             ||||||||||||| | ||| ||||||||||||
Sbjct: 20468 ttgctagaatttaggtgcatggtgcttggctt 20437



to top

>gb|AC099742.2| Papio anubis clone RP41-167P22, complete sequence
          Length = 171612

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   tgtgaaagatgcaggaaaaa 158
             ||||||||||||||||||||
Sbjct: 98740 tgtgaaagatgcaggaaaaa 98721



to top

>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete
             sequence
          Length = 182025

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaagaggaagactgacagag 98
             ||||||||||||||||||||
Sbjct: 75447 aaagaggaagactgacagag 75466



to top

>emb|BX321857.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 2/10
          Length = 313050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    gaatgtgaaagatgcaggaa 155
              ||||||||||||||||||||
Sbjct: 248572 gaatgtgaaagatgcaggaa 248591



to top

>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete
              sequence
          Length = 238589

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 555    ggaataataaatcaaagctt 574
              ||||||||||||||||||||
Sbjct: 180709 ggaataataaatcaaagctt 180690



to top

>gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, complete sequence
          Length = 139770

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     aaagaggaagactgacagag 98
              ||||||||||||||||||||
Sbjct: 114390 aaagaggaagactgacagag 114371



to top

>gb|AC161278.2| Pan troglodytes BAC clone CH251-486B7 from chromosome 7, complete
             sequence
          Length = 211383

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   tgtgaaagatgcaggaaaaa 158
             ||||||||||||||||||||
Sbjct: 48747 tgtgaaagatgcaggaaaaa 48766



to top

>gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromosome unknown, complete
              sequence
          Length = 308703

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 554    tggaataataaatcaaagct 573
              ||||||||||||||||||||
Sbjct: 118130 tggaataataaatcaaagct 118111



to top

>gb|AF129108.2|AF129108 Homo sapiens chromosome 21 clone cosmid clone D75C1 map 21q22.2,
             complete sequence
          Length = 40874

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   cacaacgttcagcaataaca 421
             ||||||||||||||||||||
Sbjct: 21618 cacaacgttcagcaataaca 21637



to top

>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete
            sequence
          Length = 144474

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 402  cacaacgttcagcaataaca 421
            ||||||||||||||||||||
Sbjct: 6918 cacaacgttcagcaataaca 6937



to top

>gb|AC003099.1| Homo sapiens chromosome 4, BAC clone B284B3, complete sequence
          Length = 95129

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 556   gaataataaatcaaagcttctgattgtt 583
             |||||||||||||| | |||||||||||
Sbjct: 69258 gaataataaatcaaggattctgattgtt 69231



to top

>emb|BX897717.4| Mouse DNA sequence from clone RP24-273F10 on chromosome X, complete
             sequence
          Length = 74320

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   tgctcctgtacccccttgca 347
             ||||||||||||||||||||
Sbjct: 14338 tgctcctgtacccccttgca 14319



to top

>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence
          Length = 128950

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    tgtgaaagatgcaggaaaaa 158
              ||||||||||||||||||||
Sbjct: 124358 tgtgaaagatgcaggaaaaa 124377



to top

>emb|BX465839.8| Mouse DNA sequence from clone RP24-70F15 on chromosome X, complete
             sequence
          Length = 75393

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 328   tgctcctgtacccccttgca 347
             ||||||||||||||||||||
Sbjct: 59984 tgctcctgtacccccttgca 60003



to top

>gb|AY956957.1| Staphylococcus sp. HPC 921 16S ribosomal RNA gene, partial sequence
          Length = 664

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 agatttggagcttgctcctt 269
           ||||||||||||||||||||
Sbjct: 41  agatttggagcttgctcctt 60



to top

>gb|AY956944.1| Staphylococcus sp. HPC 908 16S ribosomal RNA gene, partial sequence
          Length = 685

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 agatttggagcttgctcctt 269
           ||||||||||||||||||||
Sbjct: 37  agatttggagcttgctcctt 56



to top

>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete
              sequences
          Length = 196989

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    cacaacgttcagcaataaca 421
              ||||||||||||||||||||
Sbjct: 106501 cacaacgttcagcaataaca 106520



to top

>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    cacaacgttcagcaataaca 421
              ||||||||||||||||||||
Sbjct: 223667 cacaacgttcagcaataaca 223648



to top

>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    cacaacgttcagcaataaca 421
              ||||||||||||||||||||
Sbjct: 314410 cacaacgttcagcaataaca 314429



to top

>emb|CT025908.12| Zebrafish DNA sequence from clone CH211-163B1 in linkage group 18,
             complete sequence
          Length = 176163

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    gccaaagaggaagactgaca 95
             ||||||||||||||||||||
Sbjct: 91193 gccaaagaggaagactgaca 91212



to top

>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 184984

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    aaagaggaagactgacagag 98
             ||||||||||||||||||||
Sbjct: 78407 aaagaggaagactgacagag 78426



to top

>gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 map 4q25, complete sequence
          Length = 143839

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    aaagatgcaggaaaaatctt 162
              ||||||||||||||||||||
Sbjct: 103885 aaagatgcaggaaaaatctt 103904



to top

>gb|AC117614.12| Mus musculus chromosome 5, clone RP23-110C17, complete sequence
          Length = 222809

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     ccaaagaggaagactgacag 96
              ||||||||||||||||||||
Sbjct: 117675 ccaaagaggaagactgacag 117656



to top

>emb|AL359218.4|CNS05TEG Human chromosome 14 DNA sequence BAC R-55G7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 160718

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    tatatatatgttgttgatgg 288
              ||||||||||||||||||||
Sbjct: 150756 tatatatatgttgttgatgg 150775



to top

>gb|AC002064.1|HSAC002064 Human BAC clone RG016J04 from 7q21, complete sequence
          Length = 156214

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   tgtgaaagatgcaggaaaaa 158
             ||||||||||||||||||||
Sbjct: 40695 tgtgaaagatgcaggaaaaa 40676



to top

>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 505     gggcaaggtgcttggcttaa 524
               ||||||||||||||||||||
Sbjct: 1655310 gggcaaggtgcttggcttaa 1655291



to top

>dbj|AP001821.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2302A17, complete
             sequence
          Length = 108388

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 556   gaataataaatcaaagcttctgattgtt 583
             |||||||||||||| | |||||||||||
Sbjct: 19139 gaataataaatcaaggattctgattgtt 19166


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,090,357
Number of Sequences: 3902068
Number of extensions: 6090357
Number of successful extensions: 105557
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105296
Number of HSP's gapped (non-prelim): 247
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top