ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30c24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468735.1| Oryza sativa (japonica cultivar-group), mRNA 345 1e-91
2gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 345 1e-91
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 345 1e-91
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 345 1e-91
5dbj|AK069736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 1e-91
6gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete s... 48 0.036
7emb|AL020994.1|HS929C8 Human DNA sequence from clone CTA-929C8 o... 42 2.2
8emb|CR936633.1| Homo sapiens mRNA; cDNA DKFZp781F1219 (from clon... 42 2.2
9emb|CR627208.1| Homo sapiens mRNA; cDNA DKFZp781G1319 (from clon... 42 2.2
10gb|AC104365.4| Homo sapiens chromosome 18, clone RP11-108P20, co... 42 2.2
11dbj|AP003305.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.2
12gb|DQ235189.1| Solanum tuberosum clone 164F06 F-box family prote... 40 8.7
13gb|AY018040.1| Oryza sativa microsatellite MRG0365 containing (A... 40 8.7
14ref|XM_883113.1| PREDICTED: Bos taurus similar to H3 histone, fa... 40 8.7
15ref|XM_883110.1| PREDICTED: Bos taurus similar to H3 histone, fa... 40 8.7
16ref|XM_883106.1| PREDICTED: Bos taurus similar to H3 histone, fa... 40 8.7
17ref|XM_883102.1| PREDICTED: Bos taurus similar to H3 histone, fa... 40 8.7
18ref|XM_870003.1| PREDICTED: Bos taurus similar to H3 histone, fa... 40 8.7
19emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chr... 40 8.7
20gb|AC008120.17| Homo sapiens 3q27 BAC RP11-477P16 (Roswell Park ... 40 8.7
21gb|AF389851.1| Homo sapiens solute carrier family 12 member 8 (S... 40 8.7
22gb|AC106786.2| Homo sapiens chromosome 5 clone RP11-359P5, compl... 40 8.7
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
24gb|AC055752.17| Homo sapiens 3 BAC RP11-524D20 (Roswell Park Can... 40 8.7
25gb|AC008548.6| Homo sapiens chromosome 5 clone CTC-505D13, compl... 40 8.7
26dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
27emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chr... 40 8.7
28gb|DQ252505.1| Solanum tuberosum clone 085A04 F-box family prote... 40 8.7 
>ref|XM_468735.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 753

 Score =  345 bits (174), Expect = 1e-91
 Identities = 345/402 (85%)
 Strand = Plus / Plus

                                                                       
Query: 219 gttttccctctactggatggtaaagacttggtcttttgcatgcttgtatgccgccaatgg 278
           ||||||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||
Sbjct: 37  gttttccctctactggatggtcaagacctagtcttttgcatgcttgtatgtcgtcaatgg 96

                                                                       
Query: 279 tgtgaaattgcaaaggatgattacttctggaaatgcatctgctcacggaaatggccttcc 338
            | ||||||||||||||||| ||||||||||||||||| ||  |  |||| |||||||||
Sbjct: 97  cgagaaattgcaaaggatgactacttctggaaatgcatatgtgcgaggaagtggccttcc 156

                                                                       
Query: 339 atctgcaagcagcctccttctgacacaaacttccaaaagctctatttaacattctccaag 398
           || |||||||| |||||||| ||  |||||| ||| |||||||||||||| |||||||| 
Sbjct: 157 atttgcaagcaacctccttcagatgcaaactaccagaagctctatttaaccttctccaaa 216

                                                                       
Query: 399 ccacggaagacagtgcatcttcctgtacctaagctcactttcaaggatctggtgttttac 458
           ||||||| | ||  ||| ||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 217 ccacggacgccacagcaccttcctgtaccaaagctcacattcgaggatcttgtgttttac 276

                                                                       
Query: 459 attgacatgtggcttgagggatcattgatcttctctcaagcagtttcaggctgcattctt 518
           ||||||||||||||||| |||||| | |||||||||||||| |||||||||||||| |||
Sbjct: 277 attgacatgtggcttgacggatcactcatcttctctcaagctgtttcaggctgcatcctt 336

                                                                       
Query: 519 agagcaggtctacagaacacacccagcggaataccagatgtacttgttgcacacctgaat 578
            ||| |||||| ||||| |||||  | || || || ||||||||||| |||||  ||| |
Sbjct: 337 cgaggaggtctgcagaatacaccttgtggcattccggatgtacttgtagcacatttgact 396

                                                     
Query: 579 gccgcagactgcattttgatgatggaagtcgaacccaagctg 620
           ||  | ||||||||| |||||||||| || ||||||||||||
Sbjct: 397 gctcctgactgcattctgatgatggaggttgaacccaagctg 438
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
              map E30331S, complete sequence
          Length = 164820

 Score =  345 bits (174), Expect = 1e-91
 Identities = 345/402 (85%)
 Strand = Plus / Minus

                                                                          
Query: 219    gttttccctctactggatggtaaagacttggtcttttgcatgcttgtatgccgccaatgg 278
              ||||||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||
Sbjct: 138690 gttttccctctactggatggtcaagacctagtcttttgcatgcttgtatgtcgtcaatgg 138631

                                                                          
Query: 279    tgtgaaattgcaaaggatgattacttctggaaatgcatctgctcacggaaatggccttcc 338
               | ||||||||||||||||| ||||||||||||||||| ||  |  |||| |||||||||
Sbjct: 138630 cgagaaattgcaaaggatgactacttctggaaatgcatatgtgcgaggaagtggccttcc 138571

                                                                          
Query: 339    atctgcaagcagcctccttctgacacaaacttccaaaagctctatttaacattctccaag 398
              || |||||||| |||||||| ||  |||||| ||| |||||||||||||| |||||||| 
Sbjct: 138570 atttgcaagcaacctccttcagatgcaaactaccagaagctctatttaaccttctccaaa 138511

                                                                          
Query: 399    ccacggaagacagtgcatcttcctgtacctaagctcactttcaaggatctggtgttttac 458
              ||||||| | ||  ||| ||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 138510 ccacggacgccacagcaccttcctgtaccaaagctcacattcgaggatcttgtgttttac 138451

                                                                          
Query: 459    attgacatgtggcttgagggatcattgatcttctctcaagcagtttcaggctgcattctt 518
              ||||||||||||||||| |||||| | |||||||||||||| |||||||||||||| |||
Sbjct: 138450 attgacatgtggcttgacggatcactcatcttctctcaagctgtttcaggctgcatcctt 138391

                                                                          
Query: 519    agagcaggtctacagaacacacccagcggaataccagatgtacttgttgcacacctgaat 578
               ||| |||||| ||||| |||||  | || || || ||||||||||| |||||  ||| |
Sbjct: 138390 cgaggaggtctgcagaatacaccttgtggcattccggatgtacttgtagcacatttgact 138331

                                                        
Query: 579    gccgcagactgcattttgatgatggaagtcgaacccaagctg 620
              ||  | ||||||||| |||||||||| || ||||||||||||
Sbjct: 138330 gctcctgactgcattctgatgatggaggttgaacccaagctg 138289
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  345 bits (174), Expect = 1e-91
 Identities = 345/402 (85%)
 Strand = Plus / Plus

                                                                            
Query: 219      gttttccctctactggatggtaaagacttggtcttttgcatgcttgtatgccgccaatgg 278
                ||||||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||
Sbjct: 17425053 gttttccctctactggatggtcaagacctagtcttttgcatgcttgtatgtcgtcaatgg 17425112

                                                                            
Query: 279      tgtgaaattgcaaaggatgattacttctggaaatgcatctgctcacggaaatggccttcc 338
                 | ||||||||||||||||| ||||||||||||||||| ||  |  |||| |||||||||
Sbjct: 17425113 cgagaaattgcaaaggatgactacttctggaaatgcatatgtgcgaggaagtggccttcc 17425172

                                                                            
Query: 339      atctgcaagcagcctccttctgacacaaacttccaaaagctctatttaacattctccaag 398
                || |||||||| |||||||| ||  |||||| ||| |||||||||||||| |||||||| 
Sbjct: 17425173 atttgcaagcaacctccttcagatgcaaactaccagaagctctatttaaccttctccaaa 17425232

                                                                            
Query: 399      ccacggaagacagtgcatcttcctgtacctaagctcactttcaaggatctggtgttttac 458
                ||||||| | ||  ||| ||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 17425233 ccacggacgccacagcaccttcctgtaccaaagctcacattcgaggatcttgtgttttac 17425292

                                                                            
Query: 459      attgacatgtggcttgagggatcattgatcttctctcaagcagtttcaggctgcattctt 518
                ||||||||||||||||| |||||| | |||||||||||||| |||||||||||||| |||
Sbjct: 17425293 attgacatgtggcttgacggatcactcatcttctctcaagctgtttcaggctgcatcctt 17425352

                                                                            
Query: 519      agagcaggtctacagaacacacccagcggaataccagatgtacttgttgcacacctgaat 578
                 ||| |||||| ||||| |||||  | || || || ||||||||||| |||||  ||| |
Sbjct: 17425353 cgaggaggtctgcagaatacaccttgtggcattccggatgtacttgtagcacatttgact 17425412

                                                          
Query: 579      gccgcagactgcattttgatgatggaagtcgaacccaagctg 620
                ||  | ||||||||| |||||||||| || ||||||||||||
Sbjct: 17425413 gctcctgactgcattctgatgatggaggttgaacccaagctg 17425454
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  345 bits (174), Expect = 1e-91
 Identities = 345/402 (85%)
 Strand = Plus / Plus

                                                                            
Query: 219      gttttccctctactggatggtaaagacttggtcttttgcatgcttgtatgccgccaatgg 278
                ||||||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||
Sbjct: 17418594 gttttccctctactggatggtcaagacctagtcttttgcatgcttgtatgtcgtcaatgg 17418653

                                                                            
Query: 279      tgtgaaattgcaaaggatgattacttctggaaatgcatctgctcacggaaatggccttcc 338
                 | ||||||||||||||||| ||||||||||||||||| ||  |  |||| |||||||||
Sbjct: 17418654 cgagaaattgcaaaggatgactacttctggaaatgcatatgtgcgaggaagtggccttcc 17418713

                                                                            
Query: 339      atctgcaagcagcctccttctgacacaaacttccaaaagctctatttaacattctccaag 398
                || |||||||| |||||||| ||  |||||| ||| |||||||||||||| |||||||| 
Sbjct: 17418714 atttgcaagcaacctccttcagatgcaaactaccagaagctctatttaaccttctccaaa 17418773

                                                                            
Query: 399      ccacggaagacagtgcatcttcctgtacctaagctcactttcaaggatctggtgttttac 458
                ||||||| | ||  ||| ||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 17418774 ccacggacgccacagcaccttcctgtaccaaagctcacattcgaggatcttgtgttttac 17418833

                                                                            
Query: 459      attgacatgtggcttgagggatcattgatcttctctcaagcagtttcaggctgcattctt 518
                ||||||||||||||||| |||||| | |||||||||||||| |||||||||||||| |||
Sbjct: 17418834 attgacatgtggcttgacggatcactcatcttctctcaagctgtttcaggctgcatcctt 17418893

                                                                            
Query: 519      agagcaggtctacagaacacacccagcggaataccagatgtacttgttgcacacctgaat 578
                 ||| |||||| ||||| |||||  | || || || ||||||||||| |||||  ||| |
Sbjct: 17418894 cgaggaggtctgcagaatacaccttgtggcattccggatgtacttgtagcacatttgact 17418953

                                                          
Query: 579      gccgcagactgcattttgatgatggaagtcgaacccaagctg 620
                ||  | ||||||||| |||||||||| || ||||||||||||
Sbjct: 17418954 gctcctgactgcattctgatgatggaggttgaacccaagctg 17418995
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>dbj|AK069736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031J08, full
           insert sequence
          Length = 1224

 Score =  345 bits (174), Expect = 1e-91
 Identities = 345/402 (85%)
 Strand = Plus / Plus

                                                                       
Query: 219 gttttccctctactggatggtaaagacttggtcttttgcatgcttgtatgccgccaatgg 278
           ||||||||||||||||||||| ||||| | |||||||||||||||||||| || ||||||
Sbjct: 366 gttttccctctactggatggtcaagacctagtcttttgcatgcttgtatgtcgtcaatgg 425

                                                                       
Query: 279 tgtgaaattgcaaaggatgattacttctggaaatgcatctgctcacggaaatggccttcc 338
            | ||||||||||||||||| ||||||||||||||||| ||  |  |||| |||||||||
Sbjct: 426 cgagaaattgcaaaggatgactacttctggaaatgcatatgtgcgaggaagtggccttcc 485

                                                                       
Query: 339 atctgcaagcagcctccttctgacacaaacttccaaaagctctatttaacattctccaag 398
           || |||||||| |||||||| ||  |||||| ||| |||||||||||||| |||||||| 
Sbjct: 486 atttgcaagcaacctccttcagatgcaaactaccagaagctctatttaaccttctccaaa 545

                                                                       
Query: 399 ccacggaagacagtgcatcttcctgtacctaagctcactttcaaggatctggtgttttac 458
           ||||||| | ||  ||| ||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct: 546 ccacggacgccacagcaccttcctgtaccaaagctcacattcgaggatcttgtgttttac 605

                                                                       
Query: 459 attgacatgtggcttgagggatcattgatcttctctcaagcagtttcaggctgcattctt 518
           ||||||||||||||||| |||||| | |||||||||||||| |||||||||||||| |||
Sbjct: 606 attgacatgtggcttgacggatcactcatcttctctcaagctgtttcaggctgcatcctt 665

                                                                       
Query: 519 agagcaggtctacagaacacacccagcggaataccagatgtacttgttgcacacctgaat 578
            ||| |||||| ||||| |||||  | || || || ||||||||||| |||||  ||| |
Sbjct: 666 cgaggaggtctgcagaatacaccttgtggcattccggatgtacttgtagcacatttgact 725

                                                     
Query: 579 gccgcagactgcattttgatgatggaagtcgaacccaagctg 620
           ||  | ||||||||| |||||||||| || ||||||||||||
Sbjct: 726 gctcctgactgcattctgatgatggaggttgaacccaagctg 767
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>gb|CP000040.1| Bacillus cereus E33L plasmid pE33L466, complete sequence
          Length = 466370

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 305    ctggaaatgcatctgctcacggaa 328
              ||||||||||||||||||||||||
Sbjct: 249019 ctggaaatgcatctgctcacggaa 249042
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>emb|AL020994.1|HS929C8 Human DNA sequence from clone CTA-929C8 on chromosome 22q12.1-12.3,
             complete sequence
          Length = 139190

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 499   cagtttcaggctgcattctta 519
             |||||||||||||||||||||
Sbjct: 60629 cagtttcaggctgcattctta 60649
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>emb|CR936633.1| Homo sapiens mRNA; cDNA DKFZp781F1219 (from clone DKFZp781F1219)
          Length = 5069

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 499  cagtttcaggctgcattctta 519
            |||||||||||||||||||||
Sbjct: 2603 cagtttcaggctgcattctta 2623
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>emb|CR627208.1| Homo sapiens mRNA; cDNA DKFZp781G1319 (from clone DKFZp781G1319)
          Length = 5069

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 499  cagtttcaggctgcattctta 519
            |||||||||||||||||||||
Sbjct: 2603 cagtttcaggctgcattctta 2623
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>gb|AC104365.4| Homo sapiens chromosome 18, clone RP11-108P20, complete sequence
          Length = 157871

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 178   tgagaatggaaaatggatttc 198
             |||||||||||||||||||||
Sbjct: 78556 tgagaatggaaaatggatttc 78576
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>dbj|AP003305.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-667E8, complete
             sequence
          Length = 134764

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 231   ctggatggtaaagacttggtctttt 255
             ||||||||||||| |||||||||||
Sbjct: 77823 ctggatggtaaagtcttggtctttt 77799
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>gb|DQ235189.1| Solanum tuberosum clone 164F06 F-box family protein-like mRNA,
           complete cds
          Length = 1161

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 294 gatgattacttctggaaatg 313
           ||||||||||||||||||||
Sbjct: 285 gatgattacttctggaaatg 304
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>gb|AY018040.1| Oryza sativa microsatellite MRG0365 containing (AG)X26, genomic
           sequence
          Length = 252

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 tgcatcttcctgtacctaag 431
           ||||||||||||||||||||
Sbjct: 36  tgcatcttcctgtacctaag 17
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>ref|XM_883113.1| PREDICTED: Bos taurus similar to H3 histone, family 3B, transcript
            variant 5 (LOC617051), mRNA
          Length = 2868

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 451  tgttttacattgacatgtgg 470
            ||||||||||||||||||||
Sbjct: 1192 tgttttacattgacatgtgg 1211
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>ref|XM_883110.1| PREDICTED: Bos taurus similar to H3 histone, family 3B, transcript
            variant 4 (LOC617051), mRNA
          Length = 2778

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 451  tgttttacattgacatgtgg 470
            ||||||||||||||||||||
Sbjct: 1102 tgttttacattgacatgtgg 1121
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>ref|XM_883106.1| PREDICTED: Bos taurus similar to H3 histone, family 3B, transcript
            variant 3 (LOC617051), mRNA
          Length = 1690

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 451  tgttttacattgacatgtgg 470
            ||||||||||||||||||||
Sbjct: 1102 tgttttacattgacatgtgg 1121
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>ref|XM_883102.1| PREDICTED: Bos taurus similar to H3 histone, family 3B, transcript
            variant 2 (LOC617051), mRNA
          Length = 2680

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 451  tgttttacattgacatgtgg 470
            ||||||||||||||||||||
Sbjct: 1004 tgttttacattgacatgtgg 1023
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>ref|XM_870003.1| PREDICTED: Bos taurus similar to H3 histone, family 3B, transcript
           variant 1 (LOC617051), mRNA
          Length = 841

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 451 tgttttacattgacatgtgg 470
           ||||||||||||||||||||
Sbjct: 822 tgttttacattgacatgtgg 841
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>emb|AL359012.7| Human DNA sequence from clone RP11-339I10 on chromosome 13 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 176446

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   acttctggaaatgcatctgc 320
             ||||||||||||||||||||
Sbjct: 48531 acttctggaaatgcatctgc 48550
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>gb|AC008120.17| Homo sapiens 3q27 BAC RP11-477P16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 138779

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ggtgaggttctcaaggctgt 220
             ||||||||||||||||||||
Sbjct: 78996 ggtgaggttctcaaggctgt 79015
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>gb|AF389851.1| Homo sapiens solute carrier family 12 member 8 (SLC12A8) gene,
           partial cds
          Length = 118384

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 354 ccttctgacacaaacttcca 373
           ||||||||||||||||||||
Sbjct: 743 ccttctgacacaaacttcca 724
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>gb|AC106786.2| Homo sapiens chromosome 5 clone RP11-359P5, complete sequence
          Length = 107238

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tgaggttctcaaggctgttt 222
             ||||||||||||||||||||
Sbjct: 99610 tgaggttctcaaggctgttt 99591
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 412      tgcatcttcctgtacctaag 431
                ||||||||||||||||||||
Sbjct: 23737242 tgcatcttcctgtacctaag 23737261
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>gb|AC055752.17| Homo sapiens 3 BAC RP11-524D20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 116400

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   ccttctgacacaaacttcca 373
             ||||||||||||||||||||
Sbjct: 97090 ccttctgacacaaacttcca 97109
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>gb|AC008548.6| Homo sapiens chromosome 5 clone CTC-505D13, complete sequence
          Length = 116730

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   tgaggttctcaaggctgttt 222
             ||||||||||||||||||||
Sbjct: 38733 tgaggttctcaaggctgttt 38714
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   tgcatcttcctgtacctaag 431
             ||||||||||||||||||||
Sbjct: 81856 tgcatcttcctgtacctaag 81875
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>emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chromosome X, complete
             sequence
          Length = 189295

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 586   actgcattttgatgatggaa 605
             ||||||||||||||||||||
Sbjct: 88351 actgcattttgatgatggaa 88370
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>gb|DQ252505.1| Solanum tuberosum clone 085A04 F-box family protein-like mRNA,
           complete cds
          Length = 1299

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 285 attgcaaaggatgattacttctggaaat 312
           |||||| | |||||||||||||||||||
Sbjct: 316 attgcacaagatgattacttctggaaat 343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,371,959
Number of Sequences: 3902068
Number of extensions: 5371959
Number of successful extensions: 98313
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98168
Number of HSP's gapped (non-prelim): 140
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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