ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags30c06 |
|---|---|
| Clone Library Name | barley_pub |
>ADK2_ARATH (Q9LZG0) Adenosine kinase 2 (EC 2.7.1.20) (AK 2) (Adenosine| 5'-phosphotransferase 2) Length = 345 Score = 183 bits (465), Expect = 8e-47 Identities = 89/104 (85%), Positives = 94/104 (90%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLDISAVVD+ FL KYD+KLNNAILAEDKHLPMYDE+SSK NVEYIAGGATQNSI+V Sbjct: 15 GNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGGATQNSIKV 74 Query: 193 AQWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYEDEA 324 AQWMLQ PGATSYMG IGKDKYGE MK A AAGV VHYYEDE+ Sbjct: 75 AQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDES 118
>ADK1_ARATH (Q9SF85) Adenosine kinase 1 (EC 2.7.1.20) (AK 1) (Adenosine| 5'-phosphotransferase 1) Length = 344 Score = 181 bits (460), Expect = 3e-46 Identities = 88/104 (84%), Positives = 93/104 (89%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLD+SAVVD+ FL KYD+KLNNAILAEDKHLPMYDE+S K NVEYIAGGATQNSI+V Sbjct: 14 GNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAGGATQNSIKV 73 Query: 193 AQWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYEDEA 324 AQWMLQ PGATSYMG IGKDKYGE MK A AAGV VHYYEDEA Sbjct: 74 AQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEA 117
>ADK_PHYPA (O49923) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 343 Score = 144 bits (364), Expect = 4e-35 Identities = 69/103 (66%), Positives = 80/103 (77%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLDIS VVD+AFL KY + LNNAILAEDKHLPMY EL++ +VEYIAGGATQN+IR+ Sbjct: 11 GNPLLDISCVVDDAFLEKYGLTLNNAILAEDKHLPMYKELAANPDVEYIAGGATQNTIRI 70 Query: 193 AQWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYEDE 321 AQWML ATSY GC+GKD+YG+ M A GV + Y DE Sbjct: 71 AQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDE 113
>ADK_RAT (Q64640) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 361 Score = 126 bits (316), Expect = 2e-29 Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 1/102 (0%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLDISAVVD+ FL KY +K N+ ILAEDKH ++DEL K VEY AGG+TQNS++V Sbjct: 29 GNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSMKV 88 Query: 193 AQWMLQTP-GATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYE 315 AQWM+Q P A ++ GCIG DK+GE +KS A A V HYYE Sbjct: 89 AQWMIQEPHRAATFFGCIGIDKFGEILKSKAANAHVDAHYYE 130
>ADK_HUMAN (P55263) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 362 Score = 125 bits (315), Expect = 2e-29 Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 1/102 (0%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLDISAVVD+ FL KY +K N+ ILAEDKH ++DEL K VEY AGG+TQNSI+V Sbjct: 30 GNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKV 89 Query: 193 AQWMLQTP-GATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYE 315 AQWM+Q P A ++ GCIG DK+GE +K A A V HYYE Sbjct: 90 AQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYE 131
>ADK_CRIGR (P55262) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 361 Score = 125 bits (315), Expect = 2e-29 Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 1/102 (0%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLDISAVVD+ FL KY +K N+ ILAE+KH ++DEL K VEY AGG+TQNSI+V Sbjct: 29 GNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVRKFKVEYHAGGSTQNSIKV 88 Query: 193 AQWMLQTP-GATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYE 315 AQWM+Q P A ++ GCIG DK+GE +KS A A V HYYE Sbjct: 89 AQWMIQKPHKAATFFGCIGIDKFGEILKSKAAEAHVDAHYYE 130
>ADK_MOUSE (P55264) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 361 Score = 123 bits (308), Expect = 1e-28 Identities = 62/102 (60%), Positives = 76/102 (74%), Gaps = 1/102 (0%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLDISAVVD+ FL KY +K N+ ILAEDKH ++DEL K VEY AGG+TQNS++V Sbjct: 29 GNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSMKV 88 Query: 193 AQWMLQTP-GATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYE 315 AQW++Q P A ++ GCIG DK+GE +K A A V HYYE Sbjct: 89 AQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYE 130
>ADK_SCHCO (O93919) Adenosine kinase (EC 2.7.1.20)| Length = 344 Score = 89.4 bits (220), Expect = 2e-18 Identities = 46/99 (46%), Positives = 62/99 (62%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNPLLD+ E L KY +K N+AILAE+KHL +YDE+ + V Y+AGGA QN+ R Sbjct: 10 GNPLLDLQVRDGEKLLEKYGLKSNDAILAEEKHLLLYDEIVKEHEVTYVAGGAAQNAARG 69 Query: 193 AQWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHY 309 A + L P + Y GC+G D E++K+A K G+ Y Sbjct: 70 AAYCL-PPKSVVYTGCVGDDDLAEQLKAANKREGLDEAY 107
>ADK_YEAST (P47143) Adenosine kinase (EC 2.7.1.20)| Length = 340 Score = 73.9 bits (180), Expect = 9e-14 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 4/103 (3%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAE----DKHLPMYDELSSKGNVEYIAGGATQN 180 GNPLLD A V +LAKY +K N+AIL + D + ++DEL + +AGGA QN Sbjct: 9 GNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGGAAQN 68 Query: 181 SIRVAQWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHY 309 + R A ++L G Y G +GKDK+ E + + + AGV Y Sbjct: 69 TARGAAYVLGA-GQVVYFGSVGKDKFSERLLNENEKAGVKSMY 110
>ADK_SCHPO (P78825) Adenosine kinase (EC 2.7.1.20)| Length = 340 Score = 70.5 bits (171), Expect = 1e-12 Identities = 39/101 (38%), Positives = 59/101 (58%) Frame = +1 Query: 16 NPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVA 195 NPLLD + A L KY +K N+A+LA + + +Y E V Y AGGA QNS R A Sbjct: 11 NPLLDYYVGGETATLEKYGLKSNDAVLASESQMGIYKEPC----VSYSAGGAAQNSCRAA 66 Query: 196 QWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHYYED 318 Q++L P +T + GC+G+DK+ + + + + AG+ + D Sbjct: 67 QYVLP-PNSTVFAGCVGQDKFADMLLESNEKAGLRSEFSVD 106
>ADK_TOXGO (Q9TVW2) Adenosine kinase (EC 2.7.1.20) (AK) (Adenosine| 5'-phosphotransferase) Length = 363 Score = 67.8 bits (164), Expect = 7e-12 Identities = 35/99 (35%), Positives = 56/99 (56%) Frame = +1 Query: 13 GNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRV 192 GNP+LD+ A V +FL ++ +K +A LA + + +Y L + N + GG+ NS+RV Sbjct: 19 GNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLD-QFNPTSLPGGSALNSVRV 77 Query: 193 AQWMLQTPGATSYMGCIGKDKYGEEMKSAAKAAGVTVHY 309 Q +L+ PG+ YMG IG D G+ +K G+ + Sbjct: 78 VQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRF 116
>HIFB2_HAEIN (P45991) Chaperone protein hifB precursor| Length = 241 Score = 31.2 bits (69), Expect = 0.68 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%) Frame = +1 Query: 22 LLDISAVVDEAFLAKYDVKLNNAILAEDK--HLPMYDELSSKGNVEYIAGGATQNSIRVA 195 LLDI D AFLAK+ + AI + K + P + S+ ++ + AT + V Sbjct: 119 LLDIPPKPDAAFLAKHGSFMQIAIRSRLKLFYRPAKLSMDSRDAMKKVVFKATPEGVLVD 178 Query: 196 QWMLQTPGATSYMGCIGKDKYGEEMKSAA 282 QTP +Y+G + ++K + +K A Sbjct: 179 N---QTPYYMNYIGLLHQNKPAKNVKMVA 204
>YEPF_SCHPO (P78890) Hypothetical protein C23H3.15c in chromosome I| Length = 325 Score = 31.2 bits (69), Expect = 0.68 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 Query: 85 NAILAEDKHLPMYDELSSKGNVEYIAGGATQN 180 NA LAED+H+ M D++ KGN+E +AG T++ Sbjct: 277 NAQLAEDEHVSMGDKM--KGNMEKMAGKLTRD 306
>LPXB_RICPR (Q9ZDK7) Lipid-A-disaccharide synthase (EC 2.4.1.182)| Length = 380 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -1 Query: 143 PLLDNSSYIGKCLSSARMALFSLTSYLARKASSTTAEMSRRGLPLV 6 P LDN + LS+ R+ ++++ K+ + T E+S G P+V Sbjct: 239 PFLDNIQFNYLFLSNERLKAYAVSDLALAKSGTNTLEISASGTPMV 284
>Y5550_RHILO (Q98BJ1) UPF0090 protein mlr5550| Length = 215 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = -3 Query: 180 VLRGSSSNIFNIALAGQLIVHRQVLVLRENGIVQLDIILSEEGLVDDCGDVEKGVAP 10 VLRG + + L+GQ + Q++ RE+G + V+DC +V + V+P Sbjct: 29 VLRGIGFRLVRVHLSGQNGLTLQIMAEREDGTM----------TVEDCEEVSRAVSP 75
>THIG_SYNY3 (Q55710) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 656 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -2 Query: 238 NPCNLLHQEFEASIGQP**SSAWLLQQYIQH 146 NPC +L FEA G +SAWL Q+ I++ Sbjct: 92 NPCGILSPVFEAPHGNSSTNSAWLDQETIRY 122
>SYH_BIFLO (Q8G864) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 466 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 121 YDELSSKGNVEYIAGGATQNSIRVAQWMLQTPGA 222 YD L+S+GN +Y G + R+ +ML T GA Sbjct: 323 YDNLASQGNRKYPGVGLSIGLSRLVSYMLHTAGA 356
>GAC1_YEAST (P28006) Serine/threonine-protein phosphatase 1 regulatory subunit| GAC1 Length = 793 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -1 Query: 203 IHWATLIEFCVAPPAIYSTLPLLDNSSYIGKCLSSARMALFSLT 72 +H L+ F +APP TL D + K L+ + L SLT Sbjct: 206 LHCTDLVPFKIAPPLFTKTLSASDLQGQLTKYLNGQNVKLHSLT 249
>LPXK_HELPY (O25095) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 312 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/93 (23%), Positives = 40/93 (43%) Frame = +1 Query: 10 RGNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIR 189 +GN L+ DEA+L ++K + I++E + L + L + ++ G N Sbjct: 100 KGNILVSQKTAGDEAYLLALNLKQASVIVSEKRELGVLKALELGAKIVFLDDGFRFN-FN 158 Query: 190 VAQWMLQTPGATSYMGCIGKDKYGEEMKSAAKA 288 +L+ Y C+ Y E +KS +A Sbjct: 159 QFNLLLKPKVPPYYPFCLPSGLYRESIKSYEEA 191
>PHLD_BACCE (P33376) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Cereolysin A) Length = 283 Score = 28.9 bits (63), Expect = 3.4 Identities = 24/89 (26%), Positives = 37/89 (41%) Frame = +1 Query: 52 AFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVAQWMLQTPGATSY 231 A L ++ +L N I A D P YD + + G T I A+ +T Y Sbjct: 76 ALLNEWRTELENGIYAADYENPYYDNSTFASHFYDPDNGKTY--IPYAKQAKET--GAKY 131 Query: 232 MGCIGKDKYGEEMKSAAKAAGVTVHYYED 318 G+ ++MK A G+++HY D Sbjct: 132 FKLAGESYKNKDMKQAFFYLGLSLHYLGD 160
>GST1_ASCSU (P46436) Glutathione S-transferase 1 (EC 2.5.1.18) (GST| class-sigma) Length = 205 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 88 AILAEDKHLPMYDELSSKGNVEYIAG 165 A+ A DKHLP+ ++ +K EY+ G Sbjct: 124 AVPARDKHLPLLEKFLAKSGSEYMVG 149
>GLYA_ENTFA (Q831F9) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 412 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +1 Query: 67 YDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVAQWMLQTPGATSYMGC 240 YD L NAI E++ EL + NV A A Q SI ++ PG Y GC Sbjct: 6 YDPDLWNAIAREEERQENNLELIASENVVSKAVMAAQGSILTNKYAEGYPGKRYYGGC 63
>PYR1_MESAU (P08955) CAD protein [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2225 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +2 Query: 128 SCPARAMLNILLEEPRRTLSGLPNGCFKL 214 S PA + E PRR + GLP+G F L Sbjct: 1823 SAPATTEITTTPERPRRVIPGLPDGRFHL 1851
>VL2_HPV26 (P36754) Minor capsid protein L2| Length = 472 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = +1 Query: 205 LQTPGATSYMGCIGKDKYGEE--MKS-AAKAAGVTVHYYED 318 L P TS G + + G++ MK+ + K G TVHYY D Sbjct: 284 LHRPALTSRKGTVRYSRLGQKATMKTRSGKQIGATVHYYHD 324
>PUR3_BACSU (P12040) Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2)| (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) Length = 195 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/25 (40%), Positives = 16/25 (64%) Frame = +1 Query: 244 GKDKYGEEMKSAAKAAGVTVHYYED 318 G D G+ ++ K AG+TVHY ++ Sbjct: 118 GIDAVGQAFRAGVKVAGITVHYVDE 142
>LPXK_HELPJ (Q9ZMB1) Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A| 4'-kinase) Length = 312 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/93 (23%), Positives = 40/93 (43%) Frame = +1 Query: 10 RGNPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIR 189 +GN L+ DEA+L ++K + I++E + L + L + ++ G N Sbjct: 100 KGNILVPQKTAGDEAYLLALNLKQASVIVSEKRELGVLKALELGSKIVFLDDGFRFN-FN 158 Query: 190 VAQWMLQTPGATSYMGCIGKDKYGEEMKSAAKA 288 +L+ Y C+ Y E +KS +A Sbjct: 159 QFNALLKPKVPPYYPFCLPSGLYRENIKSYKEA 191
>PUR7_CLOTE (Q895U7) Phosphoribosylaminoimidazole-succinocarboxamide synthase| (EC 6.3.2.6) (SAICAR synthetase) Length = 227 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +1 Query: 31 ISAVVDEAFLAK----YDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGG 168 IS +V + K YD+KL + ED H+ + DE+S GN+ G Sbjct: 165 ISGIVKDELSKKGIELYDIKLEFGRIDEDNHIALIDEISG-GNMRAYKDG 213
>HIS4_THEMA (Q9X0C7) 1-(5-phosphoribosyl)-5-[(5-| phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16) (Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase) Length = 241 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +1 Query: 16 NPLLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGG 168 +P+ + +++E F + V L+NAI ++LP+ ++LS I GG Sbjct: 31 DPVELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLSEFAEHIQIGGG 81
>PYR1_HUMAN (P27708) CAD protein [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2225 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 128 SCPARAMLNILLEEPRRTLSGLPNGCFKL 214 S PA + + E PRR + GLP+G F L Sbjct: 1823 SAPATSEMTTTPERPRRGIPGLPDGRFHL 1851
>ILVB_ECOLI (P08142) Acetolactate synthase isozyme I large subunit (EC 2.2.1.6)| (AHAS-I) (Acetohydroxy-acid synthase I large subunit) (ALS-I) Length = 562 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +1 Query: 112 LPMYDELSSKGNVEYIAGGATQNSIRVAQWMLQTPGATSY-MGCIG 246 LP+YD LS + +I Q + +AQ M +T G + M C G Sbjct: 40 LPVYDALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSG 85
>Y1797_THETN (Q8R933) Hypothetical RNA methyltransferase TTE1797 (EC 2.1.1.-)| Length = 450 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = +1 Query: 22 LLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYI 159 + D +VDE F + N A+ +K+LP YD+ + +G + Y+ Sbjct: 155 MTDKCNIVDEDFTKALSLTFNYAL---EKNLPFYDKKTHEGYLRYL 197
>DAPF_XYLFT (Q87DI4) Diaminopimelate epimerase (EC 5.1.1.7) (DAP epimerase)| Length = 284 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +1 Query: 181 SIRVAQWMLQTPGATSYMGCIGKDKYGEEM 270 S+ +++ +P T + CIGKD+Y EM Sbjct: 98 SVATEHFLIDSPVQTHSVRCIGKDEYAVEM 127
>SYI_CHLPN (Q9Z972) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1043 Score = 28.1 bits (61), Expect = 5.7 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 161 LEEPRRTLSGLPNGCFKLLVQQVTWV 238 ++E ++ LS LPN L+Q+ TWV Sbjct: 884 MKEVQKALSELPNNAIDKLIQEETWV 909
>PHLC_BACCE (P09598) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Cereolysin A) Length = 283 Score = 27.7 bits (60), Expect = 7.5 Identities = 24/89 (26%), Positives = 37/89 (41%) Frame = +1 Query: 52 AFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVAQWMLQTPGATSY 231 A L ++ +L N I A D P YD + + G T I A+ +T Y Sbjct: 76 AQLNEWRTELENGIYAADYENPYYDNSTFASHFYDPDNGKTY--IPFAKQAKET--GAKY 131 Query: 232 MGCIGKDKYGEEMKSAAKAAGVTVHYYED 318 G+ ++MK A G+++HY D Sbjct: 132 FKLAGESYKNKDMKQAFFYLGLSLHYLGD 160
>ATG11_MAGGR (Q51UJ9) Autophagy-related protein 11| Length = 1407 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%) Frame = +1 Query: 52 AFLAKYDVKLNNAI--LAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVAQW 201 A ++K D+++ + I +AED+ L +D L V Y+ T +IR +W Sbjct: 371 ADVSKLDMQVKSLINAIAEDEELATFDYLRLIHQVPYMYAAFTAEAIRRKEW 422
>VL2_HPV03 (P36744) Minor capsid protein L2| Length = 473 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +1 Query: 205 LQTPGATSYMGCIGKDKYGEEMKS---AAKAAGVTVHYYED 318 L P TS G + + G+++ + K G VHYY+D Sbjct: 286 LHRPALTSRRGTVRYSRVGQKLSMRTRSGKGLGARVHYYQD 326
>MURE_HAEDU (Q7VP59) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 501 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 166 GATQNSIRVAQWMLQTPGATSYMGCIGKDKYGEEMKS 276 G T + +AQW G ++ MG IG YG+E ++ Sbjct: 126 GKTTTAQLLAQWHNLLGGHSAVMGTIGNGLYGQEQEA 162
>SAMN1_MOUSE (P57725) SAM domain-containing protein SAMSN-1 (SAM domain, SH3| domain and nuclear localisation signals protein 1) Length = 372 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +1 Query: 67 YDVKLNNAILAEDKHLPMYDELSSKGNVEYI----AGGATQNSIRVAQWMLQTPGATSYM 234 +D NN++ D + ++D + G+ E +GG+ +R W ++ Y+ Sbjct: 27 FDRFRNNSVSKSDDSIEVHDRELTNGSEEQSKTSSSGGSLGKKVRAISWTMKKKVGKKYI 86 Query: 235 GCIGKDKYGEEMKSA 279 + ++K E + A Sbjct: 87 KALSEEKEEESGEEA 101
>CHSTA_CHICK (Q5ZIE4) Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1| sulfotransferase) (HNK1ST) (HNK-1ST) Length = 358 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 9/72 (12%) Frame = -1 Query: 203 IHWATLIEFCVAPPAIYSTL----PLLDNSSYIGKCLSSARMALF-----SLTSYLARKA 51 IHW T +E C YS + L D++ YI K R+ + +T Y K Sbjct: 263 IHWVTYVELCAPCEITYSVIGHHETLEDDAPYILKAAGIDRLVSYPTIPPGITVYNKTKV 322 Query: 50 SSTTAEMSRRGL 15 + +S+R + Sbjct: 323 ERYFSGISKRDI 334
>VL2_HPV35 (P27234) Minor capsid protein L2| Length = 469 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Frame = +1 Query: 205 LQTPGATSYMGCIGKDKYGEEMKS---AAKAAGVTVHYYED 318 L P TS G I + G + + KA G VHYY+D Sbjct: 286 LHRPALTSRKGTIRYSRVGNKRTMHTRSGKAIGARVHYYQD 326
>Y1698_LACJO (Q74I68) Hypothetical RNA methyltransferase LJ_1698 (EC 2.1.1.-)| Length = 450 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 109 HLPMYDELSSKGNVEYI 159 H+P YDE+ +KG V Y+ Sbjct: 179 HVPAYDEIHNKGEVRYL 195
>GLYA2_RALSO (Q8XTQ1) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine| methylase 2) (SHMT 2) Length = 424 Score = 27.3 bits (59), Expect = 9.8 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = +1 Query: 58 LAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVAQWMLQTPGATSYMG 237 LA+ D + +++L E + EL + N+ A Q S+ ++ PG Y G Sbjct: 12 LAERDAPIRSSLLKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYAEGYPGKRYYGG 71 Query: 238 CIGKDKYGEEMKSAA 282 C +Y +E++S A Sbjct: 72 C----EYADEVESLA 82
>NCAP_DUGBV (P15190) Nucleocapsid protein (Nucleoprotein)| Length = 441 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/60 (30%), Positives = 23/60 (38%) Frame = +1 Query: 22 LLDISAVVDEAFLAKYDVKLNNAILAEDKHLPMYDELSSKGNVEYIAGGATQNSIRVAQW 201 LLD+ V++ A D K N + KHL + ELS K N G W Sbjct: 254 LLDLKKWVEDNKDALEDGKGNELVQTMTKHLAKHVELSKKSNALRAQGAQIDTPFSAYYW 313
>BCHB_CHLAU (Q9F6X5) Light-independent protochlorophyllide reductase subunit B| (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B) Length = 541 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/38 (44%), Positives = 19/38 (50%) Frame = -3 Query: 300 SDSCSFSGALHLLTILVLSDATHVTCCTRSLKHPLGNP 187 +D SFSG V DATHV TR L+ LG P Sbjct: 285 ADMDSFSGK----PAFVFGDATHVVGVTRFLRDELGMP 318
>POLN_ONNVS (O90368) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1. Length = 2513 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Frame = +1 Query: 49 EAFLAKYDVKLNNAILAEDKHLPMYDE--LSSKGNVEYIAGGATQNSIRV 192 ++F ++Y + N ++ D H PMY SS G+V ++ QN I + Sbjct: 1716 DSFDSEYSSRSNIQLVTADVHAPMYANSLASSGGSVLSLSSEQAQNGIMI 1765 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.131 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,212,092 Number of Sequences: 219361 Number of extensions: 868012 Number of successful extensions: 2032 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 2000 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2023 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
