| Clone Name | bags30c03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478310.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 511 bits (258), Expect = e-142 Identities = 453/518 (87%) Strand = Plus / Plus Query: 79 atggccggcaaggaaatctaccacaagatgaaggacaaggtgaaagatgcttttagttcg 138 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggctggcaaggaaatctaccacaagatgaaggacaaggtgaaagatgcttttagttcg 60 Query: 139 tcagggccagaaacagggaaaggcaagacaaaattgtcaggcaggcgtgtcaagcatggt 198 ||||| ||||||||||||||||| || |||||||||||||||| |||||||||||||||| Sbjct: 61 tcaggaccagaaacagggaaaggaaaaacaaaattgtcaggcaagcgtgtcaagcatggt 120 Query: 199 taccatcttgtcaaggggaaatcaaatcatccaatggaggactacttggtggcggagtac 258 ||||||||||| ||||| |||||||||||||| ||||||||||| | ||||| |||||| Sbjct: 121 taccatcttgtgaagggaaaatcaaatcatccgatggaggactatctagtggcagagtac 180 Query: 259 aggcaagttggggagcatgatttgggtttgtttgcaatatttgatggccacctgggccac 318 ||||||| || ||||||||| |||| ||||||||||||||||||| || |||||||| Sbjct: 181 aggcaagaaggagagcatgatctggggctgtttgcaatatttgatgggcatttgggccac 240 Query: 319 actgttccagactttctgcgtgcacatctctttgataacatcttgagcgagccagaattc 378 |||||||||||||| ||||| |||||||||||||||| ||||| | ||||||||||| Sbjct: 241 actgttccagacttcctgcgctcacatctctttgataatatcttaaagcagccagaattc 300 Query: 379 ttgagtgacacgaaaaatgctattagaaaagcatatctacttaccgatgagaaaatattg 438 ||||| || | || ||| ||| |||| ||||||| |||||| |||| ||||||||| Sbjct: 301 ttgagcaacccacaagctgcaattcgaaatgcatatcaacttacggatgcaaaaatattg 360 Query: 439 gaaaaagcagctgagttgggaagaggaggctccacggctgttaccgccatcttgataagc 498 |||| |||||||||||||| |||||||||||||| |||||||| ||||| || |||||| Sbjct: 361 gaaagcgcagctgagttgggcagaggaggctccactgctgttactgccatattaataagc 420 Query: 499 agtaacgatagtgtgaagctagtggtcgcaaatattggagattcacgagcagttattagc 558 ||| | || |||||| ||||| || |||||| |||||||||||||||||||||||||| Sbjct: 421 agtgaaaattctgtgaacctagtagttgcaaatgttggagattcacgagcagttattagc 480 Query: 559 aagaatggtaaagcagagcagctttcagttgatcatga 596 |||| |||| |||| | |||||||| ||||||||||| Sbjct: 481 aagagtggtgtagcaaaacagctttcggttgatcatga 518
>gb|BT024125.1| Zea mays clone EL01N0450F09 mRNA sequence Length = 1431 Score = 450 bits (227), Expect = e-123 Identities = 458/535 (85%) Strand = Plus / Plus Query: 79 atggccggcaaggaaatctaccacaagatgaaggacaaggtgaaagatgcttttagttcg 138 ||||| ||||| |||||| ||||||| |||||||||||||||||||||| |||||||| Sbjct: 330 atggctggcaaagaaatcctccacaaggtgaaggacaaggtgaaagatgcatttagttca 389 Query: 139 tcagggccagaaacagggaaaggcaagacaaaattgtcaggcaggcgtgtcaagcatggt 198 ||||| |||||||||||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 390 tcaggaccagaaacagggaaaggcaagacaaagttatcaggcaagcgtgtcaagcatggt 449 Query: 199 taccatcttgtcaaggggaaatcaaatcatccaatggaggactacttggtggcggagtac 258 |||||||| || ||||| ||||| ||||||||||||||||| || | ||||| |||||| Sbjct: 450 taccatctggtgaagggcaaatctaatcatccaatggaggattatctagtggcagagtac 509 Query: 259 aggcaagttggggagcatgatttgggtttgtttgcaatatttgatggccacctgggccac 318 | |||||||| || |||||||| || |||||||| ||||| ||||| |||||||||||| Sbjct: 510 cgacaagttggtgaacatgatttaggattgtttgctatattcgatggtcacctgggccac 569 Query: 319 actgttccagactttctgcgtgcacatctctttgataacatcttgagcgagccagaattc 378 ||||||||||||||| |||| | ||||| || ||||||||||||| |||||||||||| Sbjct: 570 actgttccagactttttgcgctcccatcttttcaataacatcttgagtgagccagaattc 629 Query: 379 ttgagtgacacgaaaaatgctattagaaaagcatatctacttaccgatgagaaaatattg 438 |||||||| | ||| |||||| |||| ||||| | |||||| ||| ||||||||||| Sbjct: 630 ttgagtgatccagaaactgctatccgaaatgcataccaacttacagatcagaaaatattg 689 Query: 439 gaaaaagcagctgagttgggaagaggaggctccacggctgttaccgccatcttgataagc 498 ||||| ||||| |||||||||||||| |||||||| |||||||| |||||||| ||| | Sbjct: 690 gaaaacgcagcagagttgggaagaggtggctccacagctgttactgccatcttaatagga 749 Query: 499 agtaacgatagtgtgaagctagtggtcgcaaatattggagattcacgagcagttattagc 558 ||| || | ||||| ||||| || |||||| |||| |||||||| |||||||||||| Sbjct: 750 agtgacaagttcgtgaaactagttgttgcaaatgttggggattcacgggcagttattagc 809 Query: 559 aagaatggtaaagcagagcagctttcagttgatcatgagcctagcatggagcgac 613 ||||| ||| ||| ||||||||||||||||| ||||| || | ||||||||||| Sbjct: 810 aagaacggtgtagcggagcagctttcagttgaccatgaaccaaacatggagcgac 864
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 299 bits (151), Expect = 6e-78 Identities = 223/247 (90%) Strand = Plus / Minus Query: 116 aggtgaaagatgcttttagttcgtcagggccagaaacagggaaaggcaagacaaaattgt 175 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 19192894 aggtgaaagatgcttttagttcgtcaggaccagaaacagggaaaggaaaaacaaaattgt 19192835 Query: 176 caggcaggcgtgtcaagcatggttaccatcttgtcaaggggaaatcaaatcatccaatgg 235 |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 19192834 caggcaagcgtgtcaagcatggttaccatcttgtgaagggaaaatcaaatcatccgatgg 19192775 Query: 236 aggactacttggtggcggagtacaggcaagttggggagcatgatttgggtttgtttgcaa 295 ||||||| | ||||| ||||||||||||| || ||||||||| |||| ||||||||| Sbjct: 19192774 aggactatctagtggcagagtacaggcaagaaggagagcatgatctggggctgtttgcaa 19192715 Query: 296 tatttgatggccacctgggccacactgttccagactttctgcgtgcacatctctttgata 355 |||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 19192714 tatttgatgggcatttgggccacactgttccagacttcctgcgctcacatctctttgata 19192655 Query: 356 acatctt 362 | ||||| Sbjct: 19192654 atatctt 19192648 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 404 gaaaagcatatctacttaccgatgagaaaatattggaaaaagcagctgagttgggaagag 463 |||| ||||||| |||||| |||| ||||||||||||| |||||||||||||| |||| Sbjct: 19191894 gaaatgcatatcaacttacggatgcaaaaatattggaaagcgcagctgagttgggcagag 19191835 Query: 464 gaggctccacggctgttaccgccatcttgataagcagtaacgatagtgtgaagctagtgg 523 |||||||||| |||||||| ||||| || ||||||||| | || |||||| ||||| | Sbjct: 19191834 gaggctccactgctgttactgccatattaataagcagtgaaaattctgtgaacctagtag 19191775 Query: 524 tcgcaaatattggagattcacgagcagttattagcaagaatggtaaagcagagcagcttt 583 | |||||| |||||||||||||||||||||||||||||| |||| |||| | ||||||| Sbjct: 19191774 ttgcaaatgttggagattcacgagcagttattagcaagagtggtgtagcaaaacagcttt 19191715 Query: 584 cagttgatcatga 596 | ||||||||||| Sbjct: 19191714 cggttgatcatga 19191702 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 79 atggccggcaaggaaatctaccacaagatgaaggacaaggt 119 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 19193877 atggctggcaaggaaatctaccacaagatgaaggacaaggt 19193837
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 299 bits (151), Expect = 6e-78 Identities = 223/247 (90%) Strand = Plus / Minus Query: 116 aggtgaaagatgcttttagttcgtcagggccagaaacagggaaaggcaagacaaaattgt 175 |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 116289 aggtgaaagatgcttttagttcgtcaggaccagaaacagggaaaggaaaaacaaaattgt 116230 Query: 176 caggcaggcgtgtcaagcatggttaccatcttgtcaaggggaaatcaaatcatccaatgg 235 |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct: 116229 caggcaagcgtgtcaagcatggttaccatcttgtgaagggaaaatcaaatcatccgatgg 116170 Query: 236 aggactacttggtggcggagtacaggcaagttggggagcatgatttgggtttgtttgcaa 295 ||||||| | ||||| ||||||||||||| || ||||||||| |||| ||||||||| Sbjct: 116169 aggactatctagtggcagagtacaggcaagaaggagagcatgatctggggctgtttgcaa 116110 Query: 296 tatttgatggccacctgggccacactgttccagactttctgcgtgcacatctctttgata 355 |||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 116109 tatttgatgggcatttgggccacactgttccagacttcctgcgctcacatctctttgata 116050 Query: 356 acatctt 362 | ||||| Sbjct: 116049 atatctt 116043 Score = 168 bits (85), Expect = 1e-38 Identities = 166/193 (86%) Strand = Plus / Minus Query: 404 gaaaagcatatctacttaccgatgagaaaatattggaaaaagcagctgagttgggaagag 463 |||| ||||||| |||||| |||| ||||||||||||| |||||||||||||| |||| Sbjct: 115289 gaaatgcatatcaacttacggatgcaaaaatattggaaagcgcagctgagttgggcagag 115230 Query: 464 gaggctccacggctgttaccgccatcttgataagcagtaacgatagtgtgaagctagtgg 523 |||||||||| |||||||| ||||| || ||||||||| | || |||||| ||||| | Sbjct: 115229 gaggctccactgctgttactgccatattaataagcagtgaaaattctgtgaacctagtag 115170 Query: 524 tcgcaaatattggagattcacgagcagttattagcaagaatggtaaagcagagcagcttt 583 | |||||| |||||||||||||||||||||||||||||| |||| |||| | ||||||| Sbjct: 115169 ttgcaaatgttggagattcacgagcagttattagcaagagtggtgtagcaaaacagcttt 115110 Query: 584 cagttgatcatga 596 | ||||||||||| Sbjct: 115109 cggttgatcatga 115097 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 79 atggccggcaaggaaatctaccacaagatgaaggacaaggt 119 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117272 atggctggcaaggaaatctaccacaagatgaaggacaaggt 117232
>ref|NM_127627.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT2G20630 transcript variant AT2G20630.1 mRNA, complete cds Length = 1287 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 425 catgatttgggtttgtttgctatctttgatgg 456
>ref|NM_201761.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT2G20630 transcript variant AT2G20630.2 mRNA, complete cds Length = 1483 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 362 catgatttgggtttgtttgctatctttgatgg 393
>gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 map mi148, complete sequence Length = 61384 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 16433 catgatttgggtttgtttgctatctttgatgg 16464
>gb|AY093793.1| Arabidopsis thaliana At2g20630/F23N11.5 mRNA, complete cds Length = 840 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 175 catgatttgggtttgtttgctatctttgatgg 206
>gb|AF411787.1|AF411787 Arabidopsis thaliana At2g20630/F23N11.5 mRNA, complete cds Length = 1090 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 226 catgatttgggtttgtttgctatctttgatgg 257
>dbj|AK220638.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL21-55-O11 Length = 1049 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 226 catgatttgggtttgtttgctatctttgatgg 257
>emb|BX819569.1|CNS0A9SQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1018 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 198 catgatttgggtttgtttgctatctttgatgg 229
>emb|BX842471.1|CNS0A9S4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1507 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 357 catgatttgggtttgtttgctatctttgatgg 388
>gb|AY089049.1| Arabidopsis thaliana clone 22316 mRNA, complete sequence Length = 1230 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 425 catgatttgggtttgtttgctatctttgatgg 456
>dbj|AK176314.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL23-27-N13 Length = 1178 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 326 catgatttgggtttgtttgctatctttgatgg 357
>dbj|AK176199.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL23-07-E01 Length = 1090 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 220 catgatttgggtttgtttgctatctttgatgg 251
>dbj|AK176179.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL23-04-M08 Length = 1178 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 326 catgatttgggtttgtttgctatctttgatgg 357
>dbj|AK175927.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL22-59-A17 Length = 1044 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 226 catgatttgggtttgtttgctatctttgatgg 257
>dbj|AK175913.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL22-57-F16 Length = 1121 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 277 catgatttgggtttgtttgctatctttgatgg 308
>dbj|AK175260.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL21-69-H10 Length = 1054 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 231 catgatttgggtttgtttgctatctttgatgg 262
>dbj|AK175149.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL21-57-B10 Length = 1131 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 281 catgatttgggtttgtttgctatctttgatgg 312
>dbj|AK175113.1| Arabidopsis thaliana mRNA for putative protein phosphatase 2C, complete cds, clone: RAFL21-51-K12 Length = 1096 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 226 catgatttgggtttgtttgctatctttgatgg 257
>dbj|AB079672.1| Arabidopsis thaliana AtPPC3;1.2 mRNA for protein phosphatase 2C, complete cds Length = 1057 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatgg 305 |||||||||||||||||||| || |||||||| Sbjct: 186 catgatttgggtttgtttgctatctttgatgg 217
>ref|NM_129028.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT2G34740 mRNA, complete cds Length = 720 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 343 catctctttgataacatcttgag 365 ||||||||||||||||||||||| Sbjct: 112 catctctttgataacatcttgag 134
>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete sequence Length = 69817 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 343 catctctttgataacatcttgag 365 ||||||||||||||||||||||| Sbjct: 13099 catctctttgataacatcttgag 13077
>gb|AF092432.1|AF092432 Lotus japonicus protein phosphatase type 2C (PP2C2) mRNA, complete cds Length = 1248 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 275 atgatttgggtttgtttgcaatatttgatggccac 309 |||| |||||| | ||||||||||||||||||||| Sbjct: 317 atgagttgggtctatttgcaatatttgatggccac 351
>gb|AY830123.1| Zea mays putative protein phosphatase type 2c mRNA, complete cds Length = 739 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 caaatcatccaatggaggacta 242 |||||||||||||||||||||| Sbjct: 240 caaatcatccaatggaggacta 261
>gb|AY110428.1| Zea mays CL12955_1 mRNA sequence Length = 657 Score = 44.1 bits (22), Expect = 0.53 Identities = 80/97 (82%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 517 ctagtggtcgcaaatattggagattcacgagcagttattag-caaga-atggtaaagcag 574 ||||| || |||||| |||| ||||| || ||||||||||| ||||| | ||| ||| Sbjct: 656 ctagttgttgcaaatgttggggattcncgggcagttattaggcaagacacggtgtagcga 597 Query: 575 agcagctttcagttgatcatgagcctagcatggagcg 611 |||||||||||||||| ||||| || | ||||||||| Sbjct: 596 agcagctttcagttgaccatgaaccaaacatggagcg 560
>ref|NM_118982.1| Arabidopsis thaliana catalytic/ protein phosphatase type 2C AT4G28400 mRNA, complete cds Length = 1214 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatggccacctggg 314 ||||| |||||||||||||| || |||||||| ||| |||| Sbjct: 332 catgaattgggtttgtttgctatctttgatggtcacttggg 372
>gb|AC165224.9| Mus musculus chromosome 5, clone RP24-389L10, complete sequence Length = 155046 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 436 ttggaaaaagcagctgagttgggaagagg 464 |||||||||||||||||| | |||||||| Sbjct: 79696 ttggaaaaagcagctgagataggaagagg 79668
>gb|AC009468.3| Homo sapiens BAC clone GS1-278J22 from 7, complete sequence Length = 152517 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 tattagcaagaatggtaaagcagag 576 ||||||||||||||||| ||||||| Sbjct: 21010 tattagcaagaatggtatagcagag 21034
>gb|AC142323.1| Pan troglodytes BAC clone RP43-72N8 from 7, complete sequence Length = 190220 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 tattagcaagaatggtaaagcagag 576 ||||||||||||||||| ||||||| Sbjct: 44158 tattagcaagaatggtatagcagag 44182
>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence Length = 106571 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 aatcatccaatggaggactac 243 ||||||||||||||||||||| Sbjct: 16662 aatcatccaatggaggactac 16682
>gb|AY091272.1| Arabidopsis thaliana putative protein phosphatase 2C (At4g28400) mRNA, complete cds Length = 883 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatggccacctggg 314 ||||| |||||||||||||| || |||||||| ||| |||| Sbjct: 187 catgaattgggtttgtttgctatctttgatggtcacttggg 227
>gb|AY059737.1| Arabidopsis thaliana putative protein phosphatase 2C (At4g28400) mRNA, complete cds Length = 1231 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatggccacctggg 314 ||||| |||||||||||||| || |||||||| ||| |||| Sbjct: 332 catgaattgggtttgtttgctatctttgatggtcacttggg 372
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatggccacctggg 314 ||||| |||||||||||||| || |||||||| ||| |||| Sbjct: 164665 catgaattgggtttgtttgctatctttgatggtcacttggg 164705
>emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BAC clone F20O9 (ESSA project) Length = 93695 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 catgatttgggtttgtttgcaatatttgatggccacctggg 314 ||||| |||||||||||||| || |||||||| ||| |||| Sbjct: 26748 catgaattgggtttgtttgctatctttgatggtcacttggg 26788
>gb|AC174300.4| Medicago truncatula clone mth2-84c16, complete sequence Length = 139426 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 aatcatccaatggaggactac 243 ||||||||||||||||||||| Sbjct: 71341 aatcatccaatggaggactac 71321
>gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete sequence Length = 119876 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 aatcatccaatggaggactac 243 ||||||||||||||||||||| Sbjct: 2103 aatcatccaatggaggactac 2083
>gb|AC167547.2| Mus musculus chromosome 18, clone wi1-1306E8, complete sequence Length = 43528 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aaatattggaaaaagcagct 450 |||||||||||||||||||| Sbjct: 34429 aaatattggaaaaagcagct 34448
>ref|XM_472680.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 aatcatccaatggaggacta 242 |||||||||||||||||||| Sbjct: 136 aatcatccaatggaggacta 155
>gb|AC167548.1| Mus musculus chromosome 18, clone wi1-1164C4, complete sequence Length = 41219 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 aaatattggaaaaagcagct 450 |||||||||||||||||||| Sbjct: 8403 aaatattggaaaaagcagct 8422
>gb|AC008201.8| Drosophila melanogaster clone BACR11E07, complete sequence Length = 190153 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 51841 aagatgaaggacaaggtgaa 51822
>ref|NM_145954.1| Mus musculus aldehyde dehydrogenase 16 family, member A1 (Aldh16a1), mRNA Length = 2586 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1601 cgtcagggccagaaacaggg 1620
>gb|AY350712.1| Arabidopsis arenosa clone BAC Aer6D24, complete sequence Length = 87863 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 catccaatggaggactacttggtg 249 ||||| |||||||||||||||||| Sbjct: 25002 catccgatggaggactacttggtg 25025
>gb|AY534757.1| Lycopersicon esculentum protein phosphatase 2C mRNA, complete cds Length = 1082 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tttgcaatatttgatggcca 308 |||||||||||||||||||| Sbjct: 214 tttgcaatatttgatggcca 233
>gb|AC024214.1| Caenorhabditis elegans cosmid Y77E11A, complete sequence Length = 121081 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 aaaaatgctattagaaaagcatat 414 |||||| ||||||||||||||||| Sbjct: 95776 aaaaatactattagaaaagcatat 95753
>gb|AC022559.12| Homo sapiens chromosome 8, clone RP11-404E12, complete sequence Length = 151033 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 acaagatgaaggacaaggtgaaag 124 ||||||||||||| |||||||||| Sbjct: 109993 acaagatgaaggaaaaggtgaaag 110016
>emb|BX640540.3| Chicken DNA sequence from clone WAG-124D2, complete sequence Length = 161956 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 atttgggtttgtttgcaata 297 |||||||||||||||||||| Sbjct: 44532 atttgggtttgtttgcaata 44513
>ref|XM_649514.1| Entamoeba histolytica HM-1:IMSS protein phosphatase (49.t00019) partial mRNA Length = 2694 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 529 aatattggagattcacgagcagttatta 556 ||||||||||||||| ||||| |||||| Sbjct: 2077 aatattggagattcaagagcaattatta 2104
>gb|AY232135.1| Drosophila yakuba clone yak-ad_Rpn9 mRNA sequence Length = 594 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 310 aagatgaaggacaaggtgaa 329
>gb|AC090805.7| Homo sapiens chromosome 8, clone RP11-55A15, complete sequence Length = 97951 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 acaagatgaaggacaaggtgaaag 124 ||||||||||||| |||||||||| Sbjct: 40063 acaagatgaaggaaaaggtgaaag 40086
>emb|AL021154.1|HS150O5 Human DNA sequence from clone RP1-150O5 on chromosome 1p36.13-36.22 Contains the 5' end of the gene for up-regulated in liver cancer 1 (UPLC1) (FLJ34972), the E2F2 gene for E2F transcription factor 2, the ID3 gene for inhibitor of DNA binding 3 dominant negative helix-loop-helix protein, a novel gene and two CpG islands, complete sequence Length = 129722 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 catctctttgataacatctt 362 |||||||||||||||||||| Sbjct: 2681 catctctttgataacatctt 2662
>emb|CR626941.10| Zebrafish DNA sequence from clone DKEY-12J5 in linkage group 16, complete sequence Length = 238554 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gaaaatattggaaaaagcag 448 |||||||||||||||||||| Sbjct: 162061 gaaaatattggaaaaagcag 162080
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aatcatccaatggaggacta 242 |||||||||||||||||||| Sbjct: 118318 aatcatccaatggaggacta 118299
>dbj|AK220200.1| Mus musculus mRNA for mFLJ00209 protein Length = 2554 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1577 cgtcagggccagaaacaggg 1596
>gb|AC074276.18| Homo sapiens 3 BAC RP11-113A11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191241 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 565 ggtaaagcagagcagctttc 584 |||||||||||||||||||| Sbjct: 5595 ggtaaagcagagcagctttc 5614
>gb|AC112502.7| Homo sapiens 3 BAC RP11-880C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104564 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 ttagcaagaatggtaaagcagagc 577 |||||||| ||||||||||||||| Sbjct: 59923 ttagcaagcatggtaaagcagagc 59946
>ref|NM_170088.1| Drosophila melanogaster Rpn9 CG10230-RB, transcript variant B (Rpn9), mRNA Length = 1450 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 526 aagatgaaggacaaggtgaa 545
>ref|NM_142920.1| Drosophila melanogaster Rpn9 CG10230-RA, transcript variant A (Rpn9), mRNA Length = 1325 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 401 aagatgaaggacaaggtgaa 420
>dbj|AK144995.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830022C12 product:Similar to putatively membrane-anchored aldehyde dehydrogenase, full insert sequence Length = 2572 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1608 cgtcagggccagaaacaggg 1627
>dbj|AK144967.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830016C20 product:Similar to putatively membrane-anchored aldehyde dehydrogenase, full insert sequence Length = 3499 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1600 cgtcagggccagaaacaggg 1619
>dbj|AK151691.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830034B14 product:Similar to putatively membrane-anchored aldehyde dehydrogenase, full insert sequence Length = 2573 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1601 cgtcagggccagaaacaggg 1620
>dbj|AK161198.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832428E24 product:Similar to putatively membrane-anchored aldehyde dehydrogenase, full insert sequence Length = 2610 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1639 cgtcagggccagaaacaggg 1658
>dbj|AK164374.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130077D09 product:Hypothetical aldehyde dehydrogenase family containing protein homolog [Mus musculus], full insert sequence Length = 2685 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1647 cgtcagggccagaaacaggg 1666
>dbj|AK153129.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830123P10 product:Similar to putatively membrane-anchored aldehyde dehydrogenase homolog [Mus musculus], full insert sequence Length = 1472 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 508 cgtcagggccagaaacaggg 527
>gb|AY061232.1| Drosophila melanogaster LD17530 full length cDNA Length = 1342 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 401 aagatgaaggacaaggtgaa 420
>dbj|AK169346.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920189H05 product:Similar to putatively membrane-anchored aldehyde dehydrogenase homolog [Mus musculus], full insert sequence Length = 4076 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1952 cgtcagggccagaaacaggg 1971
>dbj|AK170276.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630041B10 product:Similar to putatively membrane-anchored aldehyde dehydrogenase, full insert sequence Length = 2611 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1640 cgtcagggccagaaacaggg 1659
>gb|AC008340.5| Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR07J20, complete sequence Length = 181771 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 atttgggtttgtttgcaatatttg 301 ||||||||||||||| |||||||| Sbjct: 146965 atttgggtttgtttgaaatatttg 146988
>gb|AC138596.13| Mus musculus chromosome 1, clone RP24-287G17, complete sequence Length = 151611 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aaatctaccacaagatgaag 111 |||||||||||||||||||| Sbjct: 68153 aaatctaccacaagatgaag 68134
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 caagatgaaggacaaggtga 121 |||||||||||||||||||| Sbjct: 95240 caagatgaaggacaaggtga 95221
>dbj|AK030673.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430417M15 product:hypothetical Aldehyde dehydrogenase family containing protein, full insert sequence Length = 2565 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1594 cgtcagggccagaaacaggg 1613
>gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6, complete sequence Length = 194079 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 572 cagagcagctttcagttgat 591 |||||||||||||||||||| Sbjct: 134845 cagagcagctttcagttgat 134826
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 aatcatccaatggaggacta 242 |||||||||||||||||||| Sbjct: 22514563 aatcatccaatggaggacta 22514544
>gb|AC007549.5|AC007549 Drosophila melanogaster, chromosome 2R, region 42D-42E, BAC clone BACR04F03, complete sequence Length = 150587 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 atttgggtttgtttgcaatatttg 301 ||||||||||||||| |||||||| Sbjct: 96054 atttgggtttgtttgaaatatttg 96077
>gb|AC008223.4|AC008223 Drosophila melanogaster, chromosome 3R, region 95A-95A, BAC clone BACR16I18, complete sequence Length = 161278 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 125905 aagatgaaggacaaggtgaa 125886
>gb|AC006461.2| Homo sapiens BAC clone RP11-343N14 from 2, complete sequence Length = 181215 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 104 agatgaaggacaaggtgaaagatg 127 |||||||||| ||||||||||||| Sbjct: 125925 agatgaaggaaaaggtgaaagatg 125902
>emb|BX119908.8| Zebrafish DNA sequence from clone CH211-225A3 in linkage group 11, complete sequence Length = 121802 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 tgagaaaatattggaaaaag 445 |||||||||||||||||||| Sbjct: 71875 tgagaaaatattggaaaaag 71856
>gb|AF145311.1|AF145311 Drosophila melanogaster 26S proteasome regulatory complex subunit p39A mRNA, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 310 aagatgaaggacaaggtgaa 329
>dbj|AK219145.1| Mus musculus cDNA, clone:Y2G0147I04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000007977, based on BLAT search Length = 398 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 154 cgtcagggccagaaacaggg 173
>dbj|AK212056.1| Mus musculus cDNA, clone:Y2G0123L17, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000007977, based on BLAT search Length = 410 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 44 cgtcagggccagaaacaggg 63
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 ccacctgggccacactgttccagactttctgc 337 ||||||||||| ||| | |||||||||||||| Sbjct: 386190 ccacctgggccgcacgggtccagactttctgc 386221 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 306 ccacctgggccacactgttccagactttctgc 337 ||||||||||| ||| | |||||||||||||| Sbjct: 137630 ccacctgggccgcacgggtccagactttctgc 137599
>gb|AC024873.1|AC024873 Caenorhabditis elegans clone Y77E11A, complete sequence Length = 121081 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 391 aaaaatgctattagaaaagcatat 414 |||||| ||||||||||||||||| Sbjct: 95776 aaaaatactattagaaaagcatat 95753
>gb|BC013548.1| Mus musculus aldehyde dehydrogenase 16 family, member A1, mRNA (cDNA clone MGC:19339 IMAGE:4222058), complete cds Length = 2586 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 1601 cgtcagggccagaaacaggg 1620
>gb|AY106019.1| Zea mays PCO139265 mRNA sequence Length = 838 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 aatcatccaatggaggacta 242 |||||||||||||||||||| Sbjct: 287 aatcatccaatggaggacta 306
>gb|AE003744.3| Drosophila melanogaster chromosome 3R, section 82 of 118 of the complete sequence Length = 244356 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aagatgaaggacaaggtgaa 122 |||||||||||||||||||| Sbjct: 175148 aagatgaaggacaaggtgaa 175129
>gb|AE003790.2| Drosophila melanogaster chromosome 2R, section 7 of 73 of the complete sequence Length = 348873 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 278 atttgggtttgtttgcaatatttg 301 ||||||||||||||| |||||||| Sbjct: 183176 atttgggtttgtttgaaatatttg 183199
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 caagatgaaggacaaggtga 121 |||||||||||||||||||| Sbjct: 197432 caagatgaaggacaaggtga 197413
>gb|AC160959.5| Mus musculus BAC clone RP24-230N7 from chromosome 1, complete sequence Length = 153369 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 aaatctaccacaagatgaag 111 |||||||||||||||||||| Sbjct: 10205 aaatctaccacaagatgaag 10186
>gb|AC149868.2| Mus musculus BAC clone RP23-226I6 from 7, complete sequence Length = 190971 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 131087 cgtcagggccagaaacaggg 131068
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cgtcagggccagaaacaggg 156 |||||||||||||||||||| Sbjct: 200950 cgtcagggccagaaacaggg 200969 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,567,215 Number of Sequences: 3902068 Number of extensions: 5567215 Number of successful extensions: 103982 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103733 Number of HSP's gapped (non-prelim): 246 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)