ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KAB2_OLDAF (P58454) Kalata-B2 precursor 41 0.002
2VARF_VIOAR (P58451) Varv peptide F 39 0.011
3VODN_VIOOD (P83838) Vodo peptide N 39 0.015
4VARD_VIOAR (P58449) Varv peptide D 39 0.015
5VARC_VIOAR (P58448) Varv peptide C 39 0.015
6VARA_VIOAR (P58446) Varv peptide A 39 0.015
7KABS_OLDAF (P58458) Kalata-S 39 0.015
8KAB4_OLDAF (P83938) Kalata-B4 39 0.015
9CYO12_VIOOD (P83836) Cycloviolacin-O12 39 0.015
10CYO12_VIOAR (P83835) Varv peptide E 39 0.015
11KAB1_OLDAF (P56254) Kalata-B1 precursor 39 0.015
12KAB7_OLDAF (P58457) Kalata-B7 precursor 39 0.015
13KAB3_OLDAF (P58455) Kalata-B3/B6 precursor [Contains: Kalata-B6;... 39 0.015
14VODM_VIOOD (P83839) Vodo peptide M 38 0.019
15VARH_VIOAR (P58453) Varv peptide H 37 0.055
16VARB_VIOAR (P58447) Varv peptide B 36 0.094
17VARG_VIOAR (P58452) Varv peptide G 35 0.12
18ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citra... 32 1.4
19ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citra... 32 1.4
20HYFLC_HYBFL (P84649) Cyclotide Hyfl C 30 5.2
21HYFLB_HYBFL (P84648) Cyclotide Hyfl B 29 8.8
22PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin) 29 8.8

>KAB2_OLDAF (P58454) Kalata-B2 precursor|
          Length = 210

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVRPS 239
           CG  ETC+ G C TPGC C +P+C R S
Sbjct: 179 CG--ETCFGGTCNTPGCSCTWPICTRDS 204



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVRPS 239
           CG  ETC+ G C TPGC C +P+C R S
Sbjct: 125 CG--ETCFGGTCNTPGCSCTWPICTRDS 150



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVRPS 239
           CG  ETC+ G C TPGC C +P+C R S
Sbjct: 71  CG--ETCFGGTCNTPGCSCTWPICTRDS 96



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>VARF_VIOAR (P58451) Varv peptide F|
          Length = 29

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G CYT GC C +P+C R
Sbjct: 5   CG--ETCTLGTCYTAGCSCSWPVCTR 28



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>VODN_VIOOD (P83838) Vodo peptide N|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G CYT GC C +P+C R
Sbjct: 5   CG--ETCTLGKCYTAGCSCSWPVCYR 28



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>VARD_VIOAR (P58449) Varv peptide D|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 5   CG--ETCVGGSCNTPGCSCSWPVCTR 28



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>VARC_VIOAR (P58448) Varv peptide C|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 5   CG--ETCVGGTCNTPGCSCSWPVCTR 28



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>VARA_VIOAR (P58446) Varv peptide A|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 5   CG--ETCVGGTCNTPGCSCSWPVCTR 28



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>KABS_OLDAF (P58458) Kalata-S|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 5   CG--ETCVGGTCNTPGCSCSWPVCTR 28



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>KAB4_OLDAF (P83938) Kalata-B4|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 1   CG--ETCVGGTCNTPGCTCSWPVCTR 24



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>CYO12_VIOOD (P83836) Cycloviolacin-O12|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 5   CG--ETCVGGTCNTPGCSCSWPVCTR 28



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>CYO12_VIOAR (P83835) Varv peptide E|
          Length = 29

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 5   CG--ETCVGGTCNTPGCSCSWPVCTR 28



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>KAB1_OLDAF (P56254) Kalata-B1 precursor|
          Length = 124

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G C TPGC C +P+C R
Sbjct: 93  CG--ETCVGGTCNTPGCTCSWPVCTR 116



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>KAB7_OLDAF (P58457) Kalata-B7 precursor|
          Length = 111

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  ETC  G CYT GC C +P+C R
Sbjct: 80  CG--ETCTLGTCYTQGCTCSWPICKR 103



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>KAB3_OLDAF (P58455) Kalata-B3/B6 precursor [Contains: Kalata-B6; Kalata-B3]|
          Length = 158

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR---PSAVA 248
           CG  ETC+ G C TPGC C+ +P+C R   PSA A
Sbjct: 126 CG--ETCFGGTCNTPGCTCDPWPICTRDGLPSAAA 158



 Score = 35.8 bits (81), Expect = 0.094
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYC-EYPLCVR 233
           CG  ETC+ G C TPGC C  +P+C R
Sbjct: 71  CG--ETCFGGTCNTPGCSCSSWPICTR 95



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>VODM_VIOOD (P83839) Vodo peptide M|
          Length = 29

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233
           CG  E+C+TG CYT  C C +P+C R
Sbjct: 5   CG--ESCFTGKCYTVQCSCSWPVCTR 28



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>VARH_VIOAR (P58453) Varv peptide H|
          Length = 30

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR 233
           CG  ETC+ G C TPGC CE +P+C R
Sbjct: 5   CG--ETCFGGTCNTPGCSCETWPVCSR 29



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>VARB_VIOAR (P58447) Varv peptide B|
          Length = 30

 Score = 35.8 bits (81), Expect = 0.094
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR 233
           CG  ETC+ G C TPGC C+ +P+C R
Sbjct: 5   CG--ETCFGGTCNTPGCSCDPWPMCSR 29



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>VARG_VIOAR (P58452) Varv peptide G|
          Length = 30

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR 233
           CG  ETC+ G C TPGC C+ +P+C R
Sbjct: 5   CG--ETCFGGTCNTPGCSCDPWPVCSR 29



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>ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate|
           (pro-S-)-lyase) (Citrate cleavage enzyme)
          Length = 1091

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -1

Query: 473 SGMVVQIHTSPTHMSFIYSSNVGIVAQHRPYPHLQVHSSHSAYF-FRKKATTRYIVPTFT 297
           +G+ + +  + THM+ I    VG+   HRP P+    ++H+A F      +T    P+ T
Sbjct: 398 TGIPIHVFGTETHMTAI----VGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRT 453

Query: 296 SY*GSKDGRAEEVA 255
           +     + RA+EVA
Sbjct: 454 A--SFSESRADEVA 465



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>ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate|
           (pro-S-)-lyase) (Citrate cleavage enzyme)
          Length = 1101

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = -1

Query: 473 SGMVVQIHTSPTHMSFIYSSNVGIVAQHRPYPHLQVHSSHSAYF-FRKKATTRYIVPTFT 297
           +G+ + +  + THM+ I    VG+   HRP P+    ++H+A F      +T    P+ T
Sbjct: 398 TGIPIHVFGTETHMTAI----VGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRT 453

Query: 296 SY*GSKDGRAEEVA 255
           +     + RA+EVA
Sbjct: 454 A--SFSESRADEVA 465



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>HYFLC_HYBFL (P84649) Cyclotide Hyfl C|
          Length = 32

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +3

Query: 150 RRCGSKETCYTGMCYTP--GCYCEYPLCVR 233
           R+C   ETC+ G CYT   GC C   LC++
Sbjct: 4   RQCA--ETCFIGKCYTEELGCTCTAFLCMK 31



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>HYFLB_HYBFL (P84648) Cyclotide Hyfl B|
          Length = 32

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 168 ETCYTGMCYTP--GCYCEYPLCVR 233
           ETC+ G CYT   GC C   LC++
Sbjct: 8   ETCFIGKCYTEELGCTCTAFLCMK 31



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>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
 Frame = -1

Query: 455  IHTSPTHMSFIYSSNVGIVAQH-----RPYPHLQVHSSHSAYFFRKKATTRYIVPTFTSY 291
            IH  PT +S   S  + +V         P   L  HS+ S+  F K  T  Y+V T  S 
Sbjct: 2460 IHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSE 2519

Query: 290  *GS-KDGRAEEVASS 249
             G+  D  A +  +S
Sbjct: 2520 PGTPTDSSASQAITS 2534


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,448,556
Number of Sequences: 219361
Number of extensions: 1867563
Number of successful extensions: 4103
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4102
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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