| Clone Name | bags30b07 |
|---|---|
| Clone Library Name | barley_pub |
>KAB2_OLDAF (P58454) Kalata-B2 precursor| Length = 210 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVRPS 239 CG ETC+ G C TPGC C +P+C R S Sbjct: 179 CG--ETCFGGTCNTPGCSCTWPICTRDS 204 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVRPS 239 CG ETC+ G C TPGC C +P+C R S Sbjct: 125 CG--ETCFGGTCNTPGCSCTWPICTRDS 150 Score = 41.2 bits (95), Expect = 0.002 Identities = 16/28 (57%), Positives = 19/28 (67%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVRPS 239 CG ETC+ G C TPGC C +P+C R S Sbjct: 71 CG--ETCFGGTCNTPGCSCTWPICTRDS 96
>VARF_VIOAR (P58451) Varv peptide F| Length = 29 Score = 38.9 bits (89), Expect = 0.011 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G CYT GC C +P+C R Sbjct: 5 CG--ETCTLGTCYTAGCSCSWPVCTR 28
>VODN_VIOOD (P83838) Vodo peptide N| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G CYT GC C +P+C R Sbjct: 5 CG--ETCTLGKCYTAGCSCSWPVCYR 28
>VARD_VIOAR (P58449) Varv peptide D| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 5 CG--ETCVGGSCNTPGCSCSWPVCTR 28
>VARC_VIOAR (P58448) Varv peptide C| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 5 CG--ETCVGGTCNTPGCSCSWPVCTR 28
>VARA_VIOAR (P58446) Varv peptide A| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 5 CG--ETCVGGTCNTPGCSCSWPVCTR 28
>KABS_OLDAF (P58458) Kalata-S| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 5 CG--ETCVGGTCNTPGCSCSWPVCTR 28
>KAB4_OLDAF (P83938) Kalata-B4| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 1 CG--ETCVGGTCNTPGCTCSWPVCTR 24
>CYO12_VIOOD (P83836) Cycloviolacin-O12| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 5 CG--ETCVGGTCNTPGCSCSWPVCTR 28
>CYO12_VIOAR (P83835) Varv peptide E| Length = 29 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 5 CG--ETCVGGTCNTPGCSCSWPVCTR 28
>KAB1_OLDAF (P56254) Kalata-B1 precursor| Length = 124 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G C TPGC C +P+C R Sbjct: 93 CG--ETCVGGTCNTPGCTCSWPVCTR 116
>KAB7_OLDAF (P58457) Kalata-B7 precursor| Length = 111 Score = 38.5 bits (88), Expect = 0.015 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG ETC G CYT GC C +P+C R Sbjct: 80 CG--ETCTLGTCYTQGCTCSWPICKR 103
>KAB3_OLDAF (P58455) Kalata-B3/B6 precursor [Contains: Kalata-B6; Kalata-B3]| Length = 158 Score = 38.5 bits (88), Expect = 0.015 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 4/35 (11%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR---PSAVA 248 CG ETC+ G C TPGC C+ +P+C R PSA A Sbjct: 126 CG--ETCFGGTCNTPGCTCDPWPICTRDGLPSAAA 158 Score = 35.8 bits (81), Expect = 0.094 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYC-EYPLCVR 233 CG ETC+ G C TPGC C +P+C R Sbjct: 71 CG--ETCFGGTCNTPGCSCSSWPICTR 95
>VODM_VIOOD (P83839) Vodo peptide M| Length = 29 Score = 38.1 bits (87), Expect = 0.019 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCEYPLCVR 233 CG E+C+TG CYT C C +P+C R Sbjct: 5 CG--ESCFTGKCYTVQCSCSWPVCTR 28
>VARH_VIOAR (P58453) Varv peptide H| Length = 30 Score = 36.6 bits (83), Expect = 0.055 Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR 233 CG ETC+ G C TPGC CE +P+C R Sbjct: 5 CG--ETCFGGTCNTPGCSCETWPVCSR 29
>VARB_VIOAR (P58447) Varv peptide B| Length = 30 Score = 35.8 bits (81), Expect = 0.094 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR 233 CG ETC+ G C TPGC C+ +P+C R Sbjct: 5 CG--ETCFGGTCNTPGCSCDPWPMCSR 29
>VARG_VIOAR (P58452) Varv peptide G| Length = 30 Score = 35.4 bits (80), Expect = 0.12 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%) Frame = +3 Query: 156 CGSKETCYTGMCYTPGCYCE-YPLCVR 233 CG ETC+ G C TPGC C+ +P+C R Sbjct: 5 CG--ETCFGGTCNTPGCSCDPWPVCSR 29
>ACLY_MOUSE (Q91V92) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1091 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 473 SGMVVQIHTSPTHMSFIYSSNVGIVAQHRPYPHLQVHSSHSAYF-FRKKATTRYIVPTFT 297 +G+ + + + THM+ I VG+ HRP P+ ++H+A F +T P+ T Sbjct: 398 TGIPIHVFGTETHMTAI----VGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRT 453 Query: 296 SY*GSKDGRAEEVA 255 + + RA+EVA Sbjct: 454 A--SFSESRADEVA 465
>ACLY_HUMAN (P53396) ATP-citrate synthase (EC 2.3.3.8) (ATP-citrate| (pro-S-)-lyase) (Citrate cleavage enzyme) Length = 1101 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = -1 Query: 473 SGMVVQIHTSPTHMSFIYSSNVGIVAQHRPYPHLQVHSSHSAYF-FRKKATTRYIVPTFT 297 +G+ + + + THM+ I VG+ HRP P+ ++H+A F +T P+ T Sbjct: 398 TGIPIHVFGTETHMTAI----VGMALGHRPIPNQPPTAAHTANFLLNASGSTSTPAPSRT 453 Query: 296 SY*GSKDGRAEEVA 255 + + RA+EVA Sbjct: 454 A--SFSESRADEVA 465
>HYFLC_HYBFL (P84649) Cyclotide Hyfl C| Length = 32 Score = 30.0 bits (66), Expect = 5.2 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +3 Query: 150 RRCGSKETCYTGMCYTP--GCYCEYPLCVR 233 R+C ETC+ G CYT GC C LC++ Sbjct: 4 RQCA--ETCFIGKCYTEELGCTCTAFLCMK 31
>HYFLB_HYBFL (P84648) Cyclotide Hyfl B| Length = 32 Score = 29.3 bits (64), Expect = 8.8 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Frame = +3 Query: 168 ETCYTGMCYTP--GCYCEYPLCVR 233 ETC+ G CYT GC C LC++ Sbjct: 8 ETCFIGKCYTEELGCTCTAFLCMK 31
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 29.3 bits (64), Expect = 8.8 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Frame = -1 Query: 455 IHTSPTHMSFIYSSNVGIVAQH-----RPYPHLQVHSSHSAYFFRKKATTRYIVPTFTSY 291 IH PT +S S + +V P L HS+ S+ F K T Y+V T S Sbjct: 2460 IHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSPRFSKSLTETYVVITLPSE 2519 Query: 290 *GS-KDGRAEEVASS 249 G+ D A + +S Sbjct: 2520 PGTPTDSSASQAITS 2534 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,448,556 Number of Sequences: 219361 Number of extensions: 1867563 Number of successful extensions: 4103 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4102 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)