ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4,... 44 0.51
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.51
3gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromo... 44 0.51
4gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chrom... 44 0.51
5emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4,... 44 0.51
6gb|AC154093.1| Homo sapiens chromosome 13 clone fa0790, complete... 42 2.0
7gb|AC002541.1| Homo sapiens BAC clone CTB-43K6 from 7, complete ... 42 2.0
8emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chro... 42 2.0
9emb|X56805.1|GGCKR2 G.gallus mRNA for cKr2 gene 42 2.0
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
12dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
13gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
14emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111... 42 2.0
15emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa... 42 2.0
16emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chr... 42 2.0
17ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfami... 40 8.0
18ref|NM_001684.3| Homo sapiens ATPase, Ca++ transporting, plasma ... 40 8.0
19ref|NM_001001396.1| Homo sapiens ATPase, Ca++ transporting, plas... 40 8.0
20gb|AC090033.2| Felis catus clone RP86-523H23, complete sequence 40 8.0
21gb|AC124710.4| Mus musculus BAC clone RP24-92A2 from chromosome ... 40 8.0
22emb|CR396582.13| Zebrafish DNA sequence from clone DKEY-283B1 in... 40 8.0
23ref|XM_650150.1| Entamoeba histolytica HM-1:IMSS cleavage and po... 40 8.0
24gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, comp... 40 8.0
25ref|XM_501502.1| Yarrowia lipolytica CLIB122, YALI0C06083g predi... 40 8.0
26emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on ch... 40 8.0
27emb|AL356274.26| Human DNA sequence from clone RP11-676B18 on ch... 40 8.0
28emb|AL160253.16| Human DNA sequence from clone RP11-421D6 on chr... 40 8.0
29emb|AL133268.15| Human DNA sequence from clone RP3-425P12 on chr... 40 8.0
30emb|AL031177.1|HS889N15 Human DNA sequence from clone RP5-889N15... 40 8.0
31ref|XM_794155.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
32gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, com... 40 8.0
33emb|BX537444.1|HSM805749 Homo sapiens mRNA; cDNA DKFZp686K08109 ... 40 8.0
34emb|CR936708.1| Homo sapiens mRNA; cDNA DKFZp686G08106 (from clo... 40 8.0
35gb|AC105104.7| Homo sapiens chromosome 18, clone RP11-909J22, co... 40 8.0
36emb|CR749393.1| Homo sapiens mRNA; cDNA DKFZp686M088 (from clone... 40 8.0
37gb|AC027678.11| Homo sapiens chromosome 10 clone RP11-97A17, com... 40 8.0
38gb|AC114402.2| Homo sapiens chromosome 1 clone RP11-397P13, comp... 40 8.0
39gb|AC022390.9| Homo sapiens chromosome 10 clone RP11-131N11, com... 40 8.0
40gb|AC006479.2| Homo sapiens PAC clone RP5-1051J4 from 7, complet... 40 8.0
41gb|AC011541.7| Homo sapiens chromosome 19 clone LLNLR-258F7, com... 40 8.0
42gb|AC131945.1| Homo sapiens BAC clone RP11-5K24 from 4, complete... 40 8.0
43gb|AC154703.2| Mus musculus BAC clone RP24-349H1 from chromosome... 40 8.0
44gb|AC134978.4| Homo sapiens chromosome 18, clone RP11-671C19, co... 40 8.0
45ref|XM_218364.3| PREDICTED: Rattus norvegicus spectrin beta 4 (p... 40 8.0
46gb|AE014133.1| Streptococcus mutans UA159, complete genome 40 8.0
47emb|BX647701.1|HSM807847 Homo sapiens mRNA; cDNA DKFZp686D02133 ... 40 8.0
48emb|BX537745.1|HSM805826 Homo sapiens mRNA; cDNA DKFZp686E0762 (... 40 8.0
49emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.0
50emb|AL845483.4| Mouse DNA sequence from clone RP23-256M16 on chr... 40 8.0 
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21,
              complete sequence
          Length = 130433

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 555    tcatgcatgcatgatgattaag 576
              ||||||||||||||||||||||
Sbjct: 117082 tcatgcatgcatgatgattaag 117061
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 555     tcatgcatgcatgatgattaag 576
               ||||||||||||||||||||||
Sbjct: 8306569 tcatgcatgcatgatgattaag 8306548
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>gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromosome unknown, complete
             sequence
          Length = 165832

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 333   ctttctgaagaaatatgctgag 354
             ||||||||||||||||||||||
Sbjct: 41668 ctttctgaagaaatatgctgag 41689
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>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown,
             complete sequence
          Length = 198239

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 333   ctttctgaagaaatatgctgag 354
             ||||||||||||||||||||||
Sbjct: 80669 ctttctgaagaaatatgctgag 80648
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>emb|AL731592.2|OSJN00242 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B17,
             complete sequence
          Length = 99093

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 555   tcatgcatgcatgatgattaag 576
             ||||||||||||||||||||||
Sbjct: 19137 tcatgcatgcatgatgattaag 19116
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>gb|AC154093.1| Homo sapiens chromosome 13 clone fa0790, complete sequence
          Length = 37001

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    tggctctgcagctgctcctgg 45
             |||||||||||||||||||||
Sbjct: 36493 tggctctgcagctgctcctgg 36513
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>gb|AC002541.1| Homo sapiens BAC clone CTB-43K6 from 7, complete sequence
          Length = 166983

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 426   aaatgacatatgtgtgggaga 446
             |||||||||||||||||||||
Sbjct: 33040 aaatgacatatgtgtgggaga 33020
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>emb|AL359649.8| Human DNA sequence from clone RP11-65D24 on chromosome 13 Contains 2
              novel genes, complete sequence
          Length = 144792

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 25     tggctctgcagctgctcctgg 45
              |||||||||||||||||||||
Sbjct: 109526 tggctctgcagctgctcctgg 109506
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>emb|X56805.1|GGCKR2 G.gallus mRNA for cKr2 gene
          Length = 4492

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 11  ggtggctacattggtggctctgcagctgctcctggca 47
           ||||||| | |||||||| | ||||||||||||||||
Sbjct: 673 ggtggctgcgttggtggcccagcagctgctcctggca 637
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 556      catgcatgcatgatgattaag 576
                |||||||||||||||||||||
Sbjct: 13992726 catgcatgcatgatgattaag 13992706
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 556     catgcatgcatgatgattaag 576
               |||||||||||||||||||||
Sbjct: 6279400 catgcatgcatgatgattaag 6279380
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>dbj|AP003919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1734_E04
          Length = 101439

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 556   catgcatgcatgatgattaag 576
             |||||||||||||||||||||
Sbjct: 65537 catgcatgcatgatgattaag 65517
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 556      catgcatgcatgatgattaag 576
                |||||||||||||||||||||
Sbjct: 13947006 catgcatgcatgatgattaag 13946986
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>emb|AL732536.5|CNS08C9B Oryza sativa chromosome 12, . BAC OJ1111_F12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 115351

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 556   catgcatgcatgatgattaag 576
             |||||||||||||||||||||
Sbjct: 21402 catgcatgcatgatgattaag 21382
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>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144552

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 556    catgcatgcatgatgattaag 576
              |||||||||||||||||||||
Sbjct: 129355 catgcatgcatgatgattaag 129335
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>emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chromosome 4, complete
             sequence
          Length = 100102

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 478   aatatgtatctctgatgtaca 498
             |||||||||||||||||||||
Sbjct: 70285 aatatgtatctctgatgtaca 70265
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>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome
              19
          Length = 413528

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     tgcagctgctcctggcagct 50
              ||||||||||||||||||||
Sbjct: 184908 tgcagctgctcctggcagct 184927
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>ref|NM_001684.3| Homo sapiens ATPase, Ca++ transporting, plasma membrane 4 (ATP2B4),
            transcript variant 2, mRNA
          Length = 8733

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 5108 atgatgattaagaaaatgga 5127
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>ref|NM_001001396.1| Homo sapiens ATPase, Ca++ transporting, plasma membrane 4 (ATP2B4),
            transcript variant 1, mRNA
          Length = 8911

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 5286 atgatgattaagaaaatgga 5305
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>gb|AC090033.2| Felis catus clone RP86-523H23, complete sequence
          Length = 125267

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 438   tgtgggagatgtgtgtatttgtac 461
             |||||||||||||||||| |||||
Sbjct: 78247 tgtgggagatgtgtgtatgtgtac 78270
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>gb|AC124710.4| Mus musculus BAC clone RP24-92A2 from chromosome 1, complete sequence
          Length = 162618

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 446   atgtgtgtatttgtactacc 465
             ||||||||||||||||||||
Sbjct: 90724 atgtgtgtatttgtactacc 90743
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>emb|CR396582.13| Zebrafish DNA sequence from clone DKEY-283B1 in linkage group 3,
             complete sequence
          Length = 154857

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   cttttttcatctttaattaa 525
             ||||||||||||||||||||
Sbjct: 46400 cttttttcatctttaattaa 46419
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>ref|XM_650150.1| Entamoeba histolytica HM-1:IMSS cleavage and polyadenylation
            specificity factor 73 kDa subunit (33.t00006) partial
            mRNA
          Length = 2268

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 504  tacttttttcatctttaatt 523
            ||||||||||||||||||||
Sbjct: 2020 tacttttttcatctttaatt 2001
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>gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, complete sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    atgtgtgtatttgtactacc 465
              ||||||||||||||||||||
Sbjct: 190379 atgtgtgtatttgtactacc 190360
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>ref|XM_501502.1| Yarrowia lipolytica CLIB122, YALI0C06083g predicted mRNA
          Length = 1692

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 10   tggtggctacattggtggctctgc 33
            |||||||||||||| |||||||||
Sbjct: 1143 tggtggctacattgctggctctgc 1166
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>emb|AL355574.27| Human DNA sequence from clone RP11-432J22 on chromosome 9 Contains the
             5' end of gene DKFZp434G2311, a novel gene, the GDBR1 gene
             for putative glialblastoma cell differentiation-related,
             3' end of gene MGC23427 and five CpG islands, complete
             sequence
          Length = 139653

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    ctctgcagctgctcctggca 47
             ||||||||||||||||||||
Sbjct: 98349 ctctgcagctgctcctggca 98368
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>emb|AL356274.26| Human DNA sequence from clone RP11-676B18 on chromosome 13, complete
             sequence
          Length = 70626

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   gaggaataaataaatgacat 434
             ||||||||||||||||||||
Sbjct: 56732 gaggaataaataaatgacat 56751
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>emb|AL160253.16| Human DNA sequence from clone RP11-421D6 on chromosome 13, complete
            sequence
          Length = 183580

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   tctgcagctgctcctggcag 48
            ||||||||||||||||||||
Sbjct: 5189 tctgcagctgctcctggcag 5208
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>emb|AL133268.15| Human DNA sequence from clone RP3-425P12 on chromosome 6p21.33-22.3
             Contains 3 novel genes, a nucleoporin 50kD (NUP50) (NPAP60
             NPAP60L) pseudogene and the CMAH gene for cytidine
             monophosphate-N-acetylneuraminic acid hydroxylase
             (CMP-N-acetylneuraminate monooxygenase) (CSAH), complete
             sequence
          Length = 110794

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   gtttgaggaataaataaatg 430
             ||||||||||||||||||||
Sbjct: 51968 gtttgaggaataaataaatg 51987
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>emb|AL031177.1|HS889N15 Human DNA sequence from clone RP5-889N15 on chromosome Xq22.1-22.3
              Contains the 3' end of a novel gene (MGC44287), the PSMD10
              gene for proteasome (prosome, macropain) 26S subunit,
              non-ATPase, 10 (p28), the AUTL2 gene for AUT-like 2,
              cysteine endopeptidase (S. cerevisiae) (APG4A, MGC43691),
              the 3' end of the COL4A6 gene for collagen, type IV, alpha
              6 and a CpG island, complete sequence
          Length = 123395

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 442    ggagatgtgtgtatttgtac 461
              ||||||||||||||||||||
Sbjct: 104456 ggagatgtgtgtatttgtac 104475
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>ref|XM_794155.1| PREDICTED: Strongylocentrotus purpuratus similar to Murinoglobulin 1
            homolog (LOC594725), mRNA
          Length = 4051

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 334  tttctgaagaaatatgctga 353
            ||||||||||||||||||||
Sbjct: 4001 tttctgaagaaatatgctga 4020
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>gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, complete sequence
          Length = 159205

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 412   tttgaggaataaataaatgacata 435
             ||||||||||||| ||||||||||
Sbjct: 70273 tttgaggaataaaaaaatgacata 70296
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>emb|BX537444.1|HSM805749 Homo sapiens mRNA; cDNA DKFZp686K08109 (from clone DKFZp686K08109);
            complete cds
          Length = 8992

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 5348 atgatgattaagaaaatgga 5367
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>emb|CR936708.1| Homo sapiens mRNA; cDNA DKFZp686G08106 (from clone DKFZp686G08106)
          Length = 8711

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 5074 atgatgattaagaaaatgga 5093
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>gb|AC105104.7| Homo sapiens chromosome 18, clone RP11-909J22, complete sequence
          Length = 131296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 412    tttgaggaataaataaatgacata 435
              ||||||||||||| ||||||||||
Sbjct: 103847 tttgaggaataaaaaaatgacata 103870
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>emb|CR749393.1| Homo sapiens mRNA; cDNA DKFZp686M088 (from clone DKFZp686M088)
          Length = 8687

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 5049 atgatgattaagaaaatgga 5068
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>gb|AC027678.11| Homo sapiens chromosome 10 clone RP11-97A17, complete sequence
          Length = 150468

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   atgtgtgggagatgtgtgta 454
             ||||||||||||||||||||
Sbjct: 56977 atgtgtgggagatgtgtgta 56958
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>gb|AC114402.2| Homo sapiens chromosome 1 clone RP11-397P13, complete sequence
          Length = 179308

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   atgatgattaagaaaatgga 584
             ||||||||||||||||||||
Sbjct: 49531 atgatgattaagaaaatgga 49550
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>gb|AC022390.9| Homo sapiens chromosome 10 clone RP11-131N11, complete sequence
          Length = 161223

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    atgtgtgggagatgtgtgta 454
              ||||||||||||||||||||
Sbjct: 152657 atgtgtgggagatgtgtgta 152638
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>gb|AC006479.2| Homo sapiens PAC clone RP5-1051J4 from 7, complete sequence
          Length = 161837

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    tttgaggaataaataaatga 431
              ||||||||||||||||||||
Sbjct: 122941 tttgaggaataaataaatga 122922
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>gb|AC011541.7| Homo sapiens chromosome 19 clone LLNLR-258F7, complete sequence
          Length = 39944

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    tgcagctgctcctggcagct 50
             ||||||||||||||||||||
Sbjct: 29203 tgcagctgctcctggcagct 29222
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>gb|AC131945.1| Homo sapiens BAC clone RP11-5K24 from 4, complete sequence
          Length = 135190

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 434   tatgtgtgggagatgtgtgt 453
             ||||||||||||||||||||
Sbjct: 49321 tatgtgtgggagatgtgtgt 49302
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>gb|AC154703.2| Mus musculus BAC clone RP24-349H1 from chromosome 14, complete sequence
          Length = 154588

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   tttctttctgaagaaatatg 349
             ||||||||||||||||||||
Sbjct: 77860 tttctttctgaagaaatatg 77879
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>gb|AC134978.4| Homo sapiens chromosome 18, clone RP11-671C19, complete sequence
          Length = 177630

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 412    tttgaggaataaataaatgacata 435
              ||||||||||||| ||||||||||
Sbjct: 156949 tttgaggaataaaaaaatgacata 156972
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>ref|XM_218364.3| PREDICTED: Rattus norvegicus spectrin beta 4 (predicted)
            (Spnb4_predicted), mRNA
          Length = 8741

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   gctctgcagctgctcctggc 46
            ||||||||||||||||||||
Sbjct: 4929 gctctgcagctgctcctggc 4910
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    attgcctacttttttcatct 517
              ||||||||||||||||||||
Sbjct: 471674 attgcctacttttttcatct 471655
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>emb|BX647701.1|HSM807847 Homo sapiens mRNA; cDNA DKFZp686D02133 (from clone DKFZp686D02133)
          Length = 4714

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 1074 atgatgattaagaaaatgga 1093
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>emb|BX537745.1|HSM805826 Homo sapiens mRNA; cDNA DKFZp686E0762 (from clone DKFZp686E0762)
          Length = 5352

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 565  atgatgattaagaaaatgga 584
            ||||||||||||||||||||
Sbjct: 1763 atgatgattaagaaaatgga 1782
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     tggtggctacattggtggctctgc 33
              |||||||||||||| |||||||||
Sbjct: 783322 tggtggctacattgctggctctgc 783345
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>emb|AL845483.4| Mouse DNA sequence from clone RP23-256M16 on chromosome 2, complete
             sequence
          Length = 184819

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aggaaacatgctatactggt 185
             ||||||||||||||||||||
Sbjct: 81835 aggaaacatgctatactggt 81854


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,680,198
Number of Sequences: 3902068
Number of extensions: 7680198
Number of successful extensions: 154494
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154213
Number of HSP's gapped (non-prelim): 281
length of query: 587
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 564
effective length of database: 17,143,297,704
effective search space: 9668819905056
effective search space used: 9668819905056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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