| Clone Name | bags30b01 |
|---|---|
| Clone Library Name | barley_pub |
>PDAT_SCHPO (O94680) Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158)| (PDAT) (Pombe LRO1 homolog 1) Length = 623 Score = 143 bits (360), Expect = 2e-34 Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 2/135 (1%) Frame = +3 Query: 63 LQKEGLQAKHPVIFVPGIVTGGLELWEGHHCAEGLFRKRLWGG--TFGDVYKRPLCWVEH 236 + EG ++ HPVI VPG+++ GLE W ++C+ FRKRLWG ++ CW+EH Sbjct: 137 MYNEGYRSDHPVIMVPGVISSGLESWSFNNCSIPYFRKRLWGSWSMLKAMFLDKQCWLEH 196 Query: 237 MSLDNETGLDKPGIRVRPVTGLVAADYFVPGYFVWAVLIANLARIGYEEKNMYMAAYDWR 416 + LD +TGLD GI++R G AAD+F+ GY++W+ +I NLA IGYE NM A+YDWR Sbjct: 197 LMLDKKTGLDPKGIKLRAAQGFEAADFFITGYWIWSKVIENLAAIGYEPNNMLSASYDWR 256 Query: 417 LSFQNTETRDQTLSR 461 LS+ N E RD+ S+ Sbjct: 257 LSYANLEERDKYFSK 271
>PDAT_YEAST (P40345) Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158)| (PDAT) Length = 661 Score = 118 bits (296), Expect = 6e-27 Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 6/139 (4%) Frame = +3 Query: 63 LQKEGLQAKHPVIFVPGIVTGGLELW----EGHHCAEGLFRKRLWGGTF--GDVYKRPLC 224 L+ ++AKHPV+ VPG+++ G+E W + + FRKRLWG + + +C Sbjct: 164 LRDYNIEAKHPVVMVPGVISTGIESWGVIGDDECDSSAHFRKRLWGSFYMLRTMVMDKVC 223 Query: 225 WVEHMSLDNETGLDKPGIRVRPVTGLVAADYFVPGYFVWAVLIANLARIGYEEKNMYMAA 404 W++H+ LD ETGLD P +R G + DYF+ GY++W + NL IGYE M AA Sbjct: 224 WLKHVMLDPETGLDPPNFTLRAAQGFESTDYFIAGYWIWNKVFQNLGVIGYEPNKMTSAA 283 Query: 405 YDWRLSFQNTETRDQTLSR 461 YDWRL++ + E RD+ ++ Sbjct: 284 YDWRLAYLDLERRDRYFTK 302
>EVX2_HETFR (Q9IA18) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 424 Score = 30.0 bits (66), Expect = 3.0 Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 10/92 (10%) Frame = -1 Query: 325 GTK*SAATRPVTGLTLIP----------GLSNPVSLSNDICSTQHKGLLYTSPNVPPQRR 176 G +AA TG T P LS+P S +CS +H G LY SP+ Sbjct: 282 GVTAAAAAAAATGATPFPTSIRPLDTFRALSHPYSRPELLCSFRHPG-LYQSPH-----G 335 Query: 175 FRKXXXXXXXXXXXXXXPVTIPGTKMTGCLAC 80 T GT CL+C Sbjct: 336 LNSSAATAAAAAAAAAAASTPAGTAPCSCLSC 367
>ALA5_ARATH (Q9SGG3) Putative phospholipid-transporting ATPase 5 (EC 3.6.3.1)| (Aminophospholipid flippase 5) Length = 1228 Score = 29.6 bits (65), Expect = 3.9 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 35/92 (38%) Frame = +3 Query: 93 PVIFVPGI--VTGGLELWEGH-------------HCAEGLFRKRLWGG-TFGDV------ 206 P++FV G+ + LE W H ++G+FR+R W + GD+ Sbjct: 112 PLVFVVGLSMLKEALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKD 171 Query: 207 -------------YKRPLCWVEHMSLDNETGL 263 Y+ +C+VE M+LD ET L Sbjct: 172 EFFPADLLLLSSSYEDGICYVETMNLDGETNL 203
>ABCCB_HUMAN (Q96J66) ATP-binding cassette transporter sub-family C member 11| (Multidrug resistance-associated protein 8) Length = 1382 Score = 29.3 bits (64), Expect = 5.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +3 Query: 108 PGIVTGGLELWEGHHCAEGLFRKR 179 PGIV G LEL H +EG+ R R Sbjct: 488 PGIVNGALELERNGHASEGMTRPR 511
>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9| Length = 531 Score = 28.9 bits (63), Expect = 6.7 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = +3 Query: 66 QKEGLQAKHPV---IFVPGIVTGGLELWEGHHCAEGLFRKRLWGGTFGDVYKRPLCWVEH 236 Q+EG+ +PV + P +G LE E E R WGG ++R C +EH Sbjct: 181 QREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRRHGRNWGGPD---FERVRCGLEH 237 Query: 237 MSLDNETGLDKPGIRVRPVTGLVAADY 317 GL G +TG ++Y Sbjct: 238 ERQGRRAGLGSAGDMTLSMTGRERSEY 264
>MANS1_MACFA (Q95KG7) MANSC domain containing protein 1 precursor| Length = 431 Score = 28.5 bits (62), Expect = 8.7 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 11/39 (28%) Frame = -3 Query: 350 QDCPNKIARDKIVSCDKACD-----------RPNSYSWF 267 +DC N KI+S DKAC+ RPN Y +F Sbjct: 61 EDCINSCCSTKIISGDKACNFMIFDTRKIARRPNCYLFF 99 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,038,761 Number of Sequences: 219361 Number of extensions: 1051372 Number of successful extensions: 2491 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2488 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2968155324 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)