ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PDAT_SCHPO (O94680) Phospholipid:diacylglycerol acyltransferase ... 143 2e-34
2PDAT_YEAST (P40345) Phospholipid:diacylglycerol acyltransferase ... 118 6e-27
3EVX2_HETFR (Q9IA18) Homeobox even-skipped homolog protein 2 (EVX-2) 30 3.0
4ALA5_ARATH (Q9SGG3) Putative phospholipid-transporting ATPase 5 ... 30 3.9
5ABCCB_HUMAN (Q96J66) ATP-binding cassette transporter sub-family... 29 5.1
6CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9 29 6.7
7MANS1_MACFA (Q95KG7) MANSC domain containing protein 1 precursor 28 8.7

>PDAT_SCHPO (O94680) Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158)|
           (PDAT) (Pombe LRO1 homolog 1)
          Length = 623

 Score =  143 bits (360), Expect = 2e-34
 Identities = 64/135 (47%), Positives = 90/135 (66%), Gaps = 2/135 (1%)
 Frame = +3

Query: 63  LQKEGLQAKHPVIFVPGIVTGGLELWEGHHCAEGLFRKRLWGG--TFGDVYKRPLCWVEH 236
           +  EG ++ HPVI VPG+++ GLE W  ++C+   FRKRLWG       ++    CW+EH
Sbjct: 137 MYNEGYRSDHPVIMVPGVISSGLESWSFNNCSIPYFRKRLWGSWSMLKAMFLDKQCWLEH 196

Query: 237 MSLDNETGLDKPGIRVRPVTGLVAADYFVPGYFVWAVLIANLARIGYEEKNMYMAAYDWR 416
           + LD +TGLD  GI++R   G  AAD+F+ GY++W+ +I NLA IGYE  NM  A+YDWR
Sbjct: 197 LMLDKKTGLDPKGIKLRAAQGFEAADFFITGYWIWSKVIENLAAIGYEPNNMLSASYDWR 256

Query: 417 LSFQNTETRDQTLSR 461
           LS+ N E RD+  S+
Sbjct: 257 LSYANLEERDKYFSK 271



to top

>PDAT_YEAST (P40345) Phospholipid:diacylglycerol acyltransferase (EC 2.3.1.158)|
           (PDAT)
          Length = 661

 Score =  118 bits (296), Expect = 6e-27
 Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 6/139 (4%)
 Frame = +3

Query: 63  LQKEGLQAKHPVIFVPGIVTGGLELW----EGHHCAEGLFRKRLWGGTF--GDVYKRPLC 224
           L+   ++AKHPV+ VPG+++ G+E W    +    +   FRKRLWG  +    +    +C
Sbjct: 164 LRDYNIEAKHPVVMVPGVISTGIESWGVIGDDECDSSAHFRKRLWGSFYMLRTMVMDKVC 223

Query: 225 WVEHMSLDNETGLDKPGIRVRPVTGLVAADYFVPGYFVWAVLIANLARIGYEEKNMYMAA 404
           W++H+ LD ETGLD P   +R   G  + DYF+ GY++W  +  NL  IGYE   M  AA
Sbjct: 224 WLKHVMLDPETGLDPPNFTLRAAQGFESTDYFIAGYWIWNKVFQNLGVIGYEPNKMTSAA 283

Query: 405 YDWRLSFQNTETRDQTLSR 461
           YDWRL++ + E RD+  ++
Sbjct: 284 YDWRLAYLDLERRDRYFTK 302



to top

>EVX2_HETFR (Q9IA18) Homeobox even-skipped homolog protein 2 (EVX-2)|
          Length = 424

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 10/92 (10%)
 Frame = -1

Query: 325 GTK*SAATRPVTGLTLIP----------GLSNPVSLSNDICSTQHKGLLYTSPNVPPQRR 176
           G   +AA    TG T  P           LS+P S    +CS +H G LY SP+      
Sbjct: 282 GVTAAAAAAAATGATPFPTSIRPLDTFRALSHPYSRPELLCSFRHPG-LYQSPH-----G 335

Query: 175 FRKXXXXXXXXXXXXXXPVTIPGTKMTGCLAC 80
                              T  GT    CL+C
Sbjct: 336 LNSSAATAAAAAAAAAAASTPAGTAPCSCLSC 367



to top

>ALA5_ARATH (Q9SGG3) Putative phospholipid-transporting ATPase 5 (EC 3.6.3.1)|
           (Aminophospholipid flippase 5)
          Length = 1228

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 35/92 (38%)
 Frame = +3

Query: 93  PVIFVPGI--VTGGLELWEGH-------------HCAEGLFRKRLWGG-TFGDV------ 206
           P++FV G+  +   LE W                H ++G+FR+R W   + GD+      
Sbjct: 112 PLVFVVGLSMLKEALEDWRRFMQDVKINARKTCVHKSDGVFRQRKWKKVSVGDIVKVEKD 171

Query: 207 -------------YKRPLCWVEHMSLDNETGL 263
                        Y+  +C+VE M+LD ET L
Sbjct: 172 EFFPADLLLLSSSYEDGICYVETMNLDGETNL 203



to top

>ABCCB_HUMAN (Q96J66) ATP-binding cassette transporter sub-family C member 11|
           (Multidrug resistance-associated protein 8)
          Length = 1382

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 108 PGIVTGGLELWEGHHCAEGLFRKR 179
           PGIV G LEL    H +EG+ R R
Sbjct: 488 PGIVNGALELERNGHASEGMTRPR 511



to top

>CCDC9_HUMAN (Q9Y3X0) Coiled-coil domain-containing protein 9|
          Length = 531

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
 Frame = +3

Query: 66  QKEGLQAKHPV---IFVPGIVTGGLELWEGHHCAEGLFRKRLWGGTFGDVYKRPLCWVEH 236
           Q+EG+   +PV   +  P   +G LE  E     E     R WGG     ++R  C +EH
Sbjct: 181 QREGVLEPNPVRNFLDDPRRRSGPLEESERDRREESRRHGRNWGGPD---FERVRCGLEH 237

Query: 237 MSLDNETGLDKPGIRVRPVTGLVAADY 317
                  GL   G     +TG   ++Y
Sbjct: 238 ERQGRRAGLGSAGDMTLSMTGRERSEY 264



to top

>MANS1_MACFA (Q95KG7) MANSC domain containing protein 1 precursor|
          Length = 431

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 11/39 (28%)
 Frame = -3

Query: 350 QDCPNKIARDKIVSCDKACD-----------RPNSYSWF 267
           +DC N     KI+S DKAC+           RPN Y +F
Sbjct: 61  EDCINSCCSTKIISGDKACNFMIFDTRKIARRPNCYLFF 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,038,761
Number of Sequences: 219361
Number of extensions: 1051372
Number of successful extensions: 2491
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2488
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top