ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags30b01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 577 e-161
2dbj|AK099811.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 2e-83
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 311 1e-81
4dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic D... 311 1e-81
5dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic D... 311 1e-81
6gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incom... 80 7e-12
7ref|NM_121367.2| Arabidopsis thaliana ATPDAT; phosphatidylcholin... 70 7e-09
8gb|AY160110.1| Arabidopsis thaliana lecithine cholesterol acyltr... 70 7e-09
9gb|AY052715.1| Arabidopsis thaliana AT5g13640/MSH12_10 mRNA, com... 70 7e-09
10gb|AY210981.1| Medicago truncatula lecithine cholesterol acyltra... 68 3e-08
11emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BA... 66 1e-07
12dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 66 1e-07
13gb|BT013705.1| Lycopersicon esculentum clone 132548R, mRNA sequence 58 3e-05
14ref|NM_114352.1| Arabidopsis thaliana phosphatidylcholine-sterol... 42 1.6
15emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, B... 42 1.6
16gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome... 42 1.6
17gb|AC006228.5|AC006228 Genomic sequence for Arabidopsis thaliana... 42 1.6
18gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
19gb|AC102369.21| Mus musculus chromosome 12, clone RP23-246F14, c... 40 6.2
20emb|AL591410.8| Mouse DNA sequence from clone RP23-96I2 on chrom... 40 6.2
21ref|NM_204954.1| Gallus gallus ectonucleoside triphosphate dipho... 40 6.2
22gb|AC077689.9| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-30... 40 6.2
23gb|AC068627.16| Mus Musculus Chromosome 5 RP23-389F6, complete s... 40 6.2
24emb|CR387679.1| Gallus gallus finished cDNA, clone ChEST73j19 40 6.2
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
26gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complet... 40 6.2
27gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome... 40 6.2
28gb|U74467.1|GGU74467 Gallus gallus cell membrane ecto-ATPase mRN... 40 6.2
29gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome ... 40 6.2
30gb|M59302.1|RBLCYCA R.viridis cytochrome C2 gene, complete cds 40 6.2 
>dbj|AK100079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J23, full
           insert sequence
          Length = 2495

 Score =  577 bits (291), Expect = e-161
 Identities = 416/458 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttcccgcagtacgtcacggnaggcctcaccggcccgctaccggacccgcccggggtcaag 62
           |||||||||||||||||||  |   |||| || ||||| |||||||| ||||||||||||
Sbjct: 466 ttcccgcagtacgtcacggaggcgatcacggggccgctcccggaccctcccggggtcaag 525

                                                                       
Query: 63  ctgcagaaggaggggctgcaggccaagcaccccgtcatcttcgtgccggggatcgtcacg 122
           ||||||||||||||||||| ||| |||||||||||| | ||||| ||||| |||||||| 
Sbjct: 526 ctgcagaaggaggggctgcgggcgaagcaccccgtcgtgttcgtcccgggcatcgtcacc 585

                                                                       
Query: 123 ggaggcctcgagctctgggagggccaccactgcgccgaggggctcttccggaagcgcctc 182
           || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 586 ggcggcctcgagctctgggaggggcaccagtgcgccgaggggctcttccgcaagcgcctc 645

                                                                       
Query: 183 tggggcggcacattcggcgacgtgtacaagaggcctttatgctgggttgaacatatgtca 242
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tggggcggcacgttcggcgacgtgtacaagaggcctttatgctgggttgaacatatgtca 705

                                                                       
Query: 243 ttggacaatgaaactggattagataaaccaggaataagagttaggccggtcacaggcctt 302
            ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| 
Sbjct: 706 ctggacaatgaaactggattagataaaccaggaataagagttcggccagtcacaggccta 765

                                                                       
Query: 303 gtcgcagctgactattttgtccctggctattttgtttgggcagtcctgattgccaattta 362
           || ||||| ||||||||||| ||||| |||||||||||||| ||  ||||||| ||||||
Sbjct: 766 gtggcagcagactattttgttcctgggtattttgtttgggctgttttgattgcaaattta 825

                                                                       
Query: 363 gctcggattggatatgaagaaaagaacatgtacatggctgcttatgattggaggttatca 422
           ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| 
Sbjct: 826 gctcgtattggatatgaagaaaagaccatgtacatggctgcatatgattggaggttatct 885

                                                 
Query: 423 ttccagaacaccgagacccgtgatcaaacattgagcag 460
           ||||||||||| |||   ||||||||||| ||||||||
Sbjct: 886 ttccagaacactgaggttcgtgatcaaactttgagcag 923
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>dbj|AK099811.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F09, full
            insert sequence
          Length = 3203

 Score =  317 bits (160), Expect = 2e-83
 Identities = 226/248 (91%)
 Strand = Plus / Plus

                                                                        
Query: 213  aggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagataaacca 272
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1386 aggcctttatgctgggttgaacatatgtcactggacaatgaaactggattagataaacca 1445

                                                                        
Query: 273  ggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccctggctat 332
            |||||||||||| |||| ||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct: 1446 ggaataagagttcggccagtcacaggcctagtggcagcagactattttgttcctgggtat 1505

                                                                        
Query: 333  tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
            ||||||||||| ||  ||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 1506 tttgtttgggctgttttgattgcaaatttagctcgtattggatatgaagaaaagaccatg 1565

                                                                        
Query: 393  tacatggctgcttatgattggaggttatcattccagaacaccgagacccgtgatcaaaca 452
            ||||||||||| ||||||||||||||||| ||||||||||| |||   | ||||||||| 
Sbjct: 1566 tacatggctgcatatgattggaggttatctttccagaacactgaggttcatgatcaaact 1625

                    
Query: 453  ttgagcag 460
            ||||||||
Sbjct: 1626 ttgagcag 1633
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  311 bits (157), Expect = 1e-81
 Identities = 205/221 (92%)
 Strand = Plus / Minus

                                                                            
Query: 213      aggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagataaacca 272
                |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 16492378 aggcctttatgctgggttgaacatatgtcactggacaatgaaactggattagataaacca 16492319

                                                                            
Query: 273      ggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccctggctat 332
                |||||||||||| |||| ||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct: 16492318 ggaataagagttcggccagtcacaggcctagtggcagcagactattttgttcctgggtat 16492259

                                                                            
Query: 333      tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
                ||||||||||| ||  ||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 16492258 tttgtttgggctgttttgattgcaaatttagctcgtattggatatgaagaaaagaccatg 16492199

                                                         
Query: 393      tacatggctgcttatgattggaggttatcattccagaacac 433
                ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 16492198 tacatggctgcatatgattggaggttatctttccagaacac 16492158



 Score =  258 bits (130), Expect = 1e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                            
Query: 3        ttcccgcagtacgtcacggnaggcctcaccggcccgctaccggacccgcccggggtcaag 62
                |||||||||||||||||||  |   |||| || ||||| |||||||| ||||||||||||
Sbjct: 16494665 ttcccgcagtacgtcacggaggcgatcacggggccgctcccggaccctcccggggtcaag 16494606

                                                                            
Query: 63       ctgcagaaggaggggctgcaggccaagcaccccgtcatcttcgtgccggggatcgtcacg 122
                ||||||||||||||||||| ||| |||||||||||| | ||||| ||||| |||||||| 
Sbjct: 16494605 ctgcagaaggaggggctgcgggcgaagcaccccgtcgtgttcgtcccgggcatcgtcacc 16494546

                                                                            
Query: 123      ggaggcctcgagctctgggagggccaccactgcgccgaggggctcttccggaagcgcctc 182
                || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 16494545 ggcggcctcgagctctgggaggggcaccagtgcgccgaggggctcttccgcaagcgcctc 16494486

                                                 
Query: 183      tggggcggcacattcggcgacgtgtacaagagg 215
                ||||||||||| |||||||||||||||||||||
Sbjct: 16494485 tggggcggcacgttcggcgacgtgtacaagagg 16494453
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>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1123_B08
          Length = 134028

 Score =  311 bits (157), Expect = 1e-81
 Identities = 205/221 (92%)
 Strand = Plus / Minus

                                                                         
Query: 213   aggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagataaacca 272
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 24603 aggcctttatgctgggttgaacatatgtcactggacaatgaaactggattagataaacca 24544

                                                                         
Query: 273   ggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccctggctat 332
             |||||||||||| |||| ||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct: 24543 ggaataagagttcggccagtcacaggcctagtggcagcagactattttgttcctgggtat 24484

                                                                         
Query: 333   tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
             ||||||||||| ||  ||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 24483 tttgtttgggctgttttgattgcaaatttagctcgtattggatatgaagaaaagaccatg 24424

                                                      
Query: 393   tacatggctgcttatgattggaggttatcattccagaacac 433
             ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 24423 tacatggctgcatatgattggaggttatctttccagaacac 24383



 Score =  258 bits (130), Expect = 1e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                         
Query: 3     ttcccgcagtacgtcacggnaggcctcaccggcccgctaccggacccgcccggggtcaag 62
             |||||||||||||||||||  |   |||| || ||||| |||||||| ||||||||||||
Sbjct: 26890 ttcccgcagtacgtcacggaggcgatcacggggccgctcccggaccctcccggggtcaag 26831

                                                                         
Query: 63    ctgcagaaggaggggctgcaggccaagcaccccgtcatcttcgtgccggggatcgtcacg 122
             ||||||||||||||||||| ||| |||||||||||| | ||||| ||||| |||||||| 
Sbjct: 26830 ctgcagaaggaggggctgcgggcgaagcaccccgtcgtgttcgtcccgggcatcgtcacc 26771

                                                                         
Query: 123   ggaggcctcgagctctgggagggccaccactgcgccgaggggctcttccggaagcgcctc 182
             || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 26770 ggcggcctcgagctctgggaggggcaccagtgcgccgaggggctcttccgcaagcgcctc 26711

                                              
Query: 183   tggggcggcacattcggcgacgtgtacaagagg 215
             ||||||||||| |||||||||||||||||||||
Sbjct: 26710 tggggcggcacgttcggcgacgtgtacaagagg 26678
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>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0046G12
          Length = 189391

 Score =  311 bits (157), Expect = 1e-81
 Identities = 205/221 (92%)
 Strand = Plus / Minus

                                                                          
Query: 213    aggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagataaacca 272
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 180925 aggcctttatgctgggttgaacatatgtcactggacaatgaaactggattagataaacca 180866

                                                                          
Query: 273    ggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccctggctat 332
              |||||||||||| |||| ||||||||||| || ||||| ||||||||||| ||||| |||
Sbjct: 180865 ggaataagagttcggccagtcacaggcctagtggcagcagactattttgttcctgggtat 180806

                                                                          
Query: 333    tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
              ||||||||||| ||  ||||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 180805 tttgtttgggctgttttgattgcaaatttagctcgtattggatatgaagaaaagaccatg 180746

                                                       
Query: 393    tacatggctgcttatgattggaggttatcattccagaacac 433
              ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 180745 tacatggctgcatatgattggaggttatctttccagaacac 180705



 Score =  258 bits (130), Expect = 1e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                          
Query: 3      ttcccgcagtacgtcacggnaggcctcaccggcccgctaccggacccgcccggggtcaag 62
              |||||||||||||||||||  |   |||| || ||||| |||||||| ||||||||||||
Sbjct: 183212 ttcccgcagtacgtcacggaggcgatcacggggccgctcccggaccctcccggggtcaag 183153

                                                                          
Query: 63     ctgcagaaggaggggctgcaggccaagcaccccgtcatcttcgtgccggggatcgtcacg 122
              ||||||||||||||||||| ||| |||||||||||| | ||||| ||||| |||||||| 
Sbjct: 183152 ctgcagaaggaggggctgcgggcgaagcaccccgtcgtgttcgtcccgggcatcgtcacc 183093

                                                                          
Query: 123    ggaggcctcgagctctgggagggccaccactgcgccgaggggctcttccggaagcgcctc 182
              || |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 183092 ggcggcctcgagctctgggaggggcaccagtgcgccgaggggctcttccgcaagcgcctc 183033

                                               
Query: 183    tggggcggcacattcggcgacgtgtacaagagg 215
              ||||||||||| |||||||||||||||||||||
Sbjct: 183032 tggggcggcacgttcggcgacgtgtacaagagg 183000
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>gb|AY448013.1|AY448010S4 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
            SR4
          Length = 87724

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 306  gcagctgactattttgtccctggctattttgtttgggcagtcctgattgccaatttagct 365
            |||||||| ||||||| |||||| || || |||||||| || |||||||  ||||| || 
Sbjct: 6251 gcagctgattattttgcccctggatacttcgtttgggctgtactgattgagaatttggca 6192

                                                                        
Query: 366  cggattggatatgaagaaaagaacatgtacatggctgcttatgattggaggttatcattc 425
             | ||||| |||||| | ||||| ||||| |||||||||||||| |||||| | || |||
Sbjct: 6191 agaattgggtatgaacagaagaatatgtatatggctgcttatgactggaggctttctttc 6132

                    
Query: 426  cagaacac 433
            ||||||||
Sbjct: 6131 cagaacac 6124



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 117  gtcacgggaggcctcgagctctgggagggc 146
            ||||| || |||||||||||||||||||||
Sbjct: 6664 gtcaccggcggcctcgagctctgggagggc 6635
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>ref|NM_121367.2| Arabidopsis thaliana ATPDAT; phosphatidylcholine-sterol
            O-acyltransferase AT5G13640 (ATPDAT) mRNA, complete cds
          Length = 2811

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 161/203 (79%)
 Strand = Plus / Plus

                                                                        
Query: 207  tacaagaggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagat 266
            ||||| |||||| |||| ||||| ||||| |||||| | |||||||||||||| || |||
Sbjct: 906  tacaaaaggcctctatgttgggtggaacacatgtcacttgacaatgaaactgggttggat 965

                                                                        
Query: 267  aaaccaggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccct 326
              | | || || |||||| |  | ||  |||| || || || |||||||| ||||  |||
Sbjct: 966  ccagctggtattagagttcgagctgtatcaggactcgtggctgctgactactttgctcct 1025

                                                                        
Query: 327  ggctattttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaag 386
            ||||| ||||| |||||||| |||||||| ||  | || |  |||||||||||||| || 
Sbjct: 1026 ggctactttgtctgggcagtgctgattgctaaccttgcacatattggatatgaagagaaa 1085

                                   
Query: 387  aacatgtacatggctgcttatga 409
            || |||||||||||||| |||||
Sbjct: 1086 aatatgtacatggctgcatatga 1108
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>gb|AY160110.1| Arabidopsis thaliana lecithine cholesterol acyltransferase-like
           protein mRNA, complete cds
          Length = 2431

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 161/203 (79%)
 Strand = Plus / Plus

                                                                       
Query: 207 tacaagaggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagat 266
           ||||| |||||| |||| ||||| ||||| |||||| | |||||||||||||| || |||
Sbjct: 563 tacaaaaggcctctatgttgggtggaacacatgtcacttgacaatgaaactgggttggat 622

                                                                       
Query: 267 aaaccaggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccct 326
             | | || || |||||| |  | ||  |||| || || || |||||||| ||||  |||
Sbjct: 623 ccagctggtattagagttcgagctgtatcaggactcgtggctgctgactactttgctcct 682

                                                                       
Query: 327 ggctattttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaag 386
           ||||| ||||| |||||||| |||||||| ||  | || |  |||||||||||||| || 
Sbjct: 683 ggctactttgtctgggcagtgctgattgctaaccttgcacatattggatatgaagagaaa 742

                                  
Query: 387 aacatgtacatggctgcttatga 409
           || |||||||||||||| |||||
Sbjct: 743 aatatgtacatggctgcatatga 765
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>gb|AY052715.1| Arabidopsis thaliana AT5g13640/MSH12_10 mRNA, complete cds
          Length = 2402

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 161/203 (79%)
 Strand = Plus / Plus

                                                                       
Query: 207 tacaagaggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagat 266
           ||||| |||||| |||| ||||| ||||| |||||| | |||||||||||||| || |||
Sbjct: 498 tacaaaaggcctctatgttgggtggaacacatgtcacttgacaatgaaactgggttggat 557

                                                                       
Query: 267 aaaccaggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccct 326
             | | || || |||||| |  | ||  |||| || || || |||||||| ||||  |||
Sbjct: 558 ccagctggtattagagttcgagctgtatcaggactcgtggctgctgactactttgctcct 617

                                                                       
Query: 327 ggctattttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaag 386
           ||||| ||||| |||||||| |||||||| ||  | || |  |||||||||||||| || 
Sbjct: 618 ggctactttgtctgggcagtgctgattgctaaccttgcacatattggatatgaagagaaa 677

                                  
Query: 387 aacatgtacatggctgcttatga 409
           || |||||||||||||| |||||
Sbjct: 678 aatatgtacatggctgcatatga 700
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>gb|AY210981.1| Medicago truncatula lecithine cholesterol acyltransferase-like
           protein mRNA, complete cds
          Length = 2828

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 109/134 (81%)
 Strand = Plus / Plus

                                                                       
Query: 300 cttgtcgcagctgactattttgtccctggctattttgtttgggcagtcctgattgccaat 359
           ||||| || |||||||| |||| | | || || ||||||||||| | ||| ||||| || 
Sbjct: 802 cttgtagctgctgactactttgccgcaggatactttgtttgggcggacctaattgctaac 861

                                                                       
Query: 360 ttagctcggattggatatgaagaaaagaacatgtacatggctgcttatgattggaggtta 419
           || || || || || ||||||||||| |  |||||||||||||| |||||||||||  ||
Sbjct: 862 ttggcacgcatcggttatgaagaaaaaactatgtacatggctgcatatgattggagaata 921

                         
Query: 420 tcattccagaacac 433
           ||||| ||||||||
Sbjct: 922 tcatttcagaacac 935
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>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project)
          Length = 90472

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 156/197 (79%)
 Strand = Plus / Plus

                                                                         
Query: 213   aggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagataaacca 272
             |||||| |||| ||||| ||||| |||||| | |||||||||||||| || |||  | | 
Sbjct: 77262 aggcctctatgttgggtggaacacatgtcacttgacaatgaaactgggttggatccagct 77321

                                                                         
Query: 273   ggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccctggctat 332
             || || |||||| |  | ||  |||| || || || |||||||| ||||  |||||||| 
Sbjct: 77322 ggtattagagttcgagctgtatcaggactcgtggctgctgactactttgctcctggctac 77381

                                                                         
Query: 333   tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
             ||||| |||||||| |||||||| ||  | || |  |||||||||||||| || || |||
Sbjct: 77382 tttgtctgggcagtgctgattgctaaccttgcacatattggatatgaagagaaaaatatg 77441

                              
Query: 393   tacatggctgcttatga 409
             ||||||||||| |||||
Sbjct: 77442 tacatggctgcatatga 77458
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>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12
          Length = 79259

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 156/197 (79%)
 Strand = Plus / Plus

                                                                         
Query: 213   aggcctttatgctgggttgaacatatgtcattggacaatgaaactggattagataaacca 272
             |||||| |||| ||||| ||||| |||||| | |||||||||||||| || |||  | | 
Sbjct: 38004 aggcctctatgttgggtggaacacatgtcacttgacaatgaaactgggttggatccagct 38063

                                                                         
Query: 273   ggaataagagttaggccggtcacaggccttgtcgcagctgactattttgtccctggctat 332
             || || |||||| |  | ||  |||| || || || |||||||| ||||  |||||||| 
Sbjct: 38064 ggtattagagttcgagctgtatcaggactcgtggctgctgactactttgctcctggctac 38123

                                                                         
Query: 333   tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
             ||||| |||||||| |||||||| ||  | || |  |||||||||||||| || || |||
Sbjct: 38124 tttgtctgggcagtgctgattgctaaccttgcacatattggatatgaagagaaaaatatg 38183

                              
Query: 393   tacatggctgcttatga 409
             ||||||||||| |||||
Sbjct: 38184 tacatggctgcatatga 38200
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>gb|BT013705.1| Lycopersicon esculentum clone 132548R, mRNA sequence
          Length = 2441

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                       
Query: 333 tttgtttgggcagtcctgattgccaatttagctcggattggatatgaagaaaagaacatg 392
           ||||| ||||||||  ||||||| || || ||||| |||||||| || || || | ||||
Sbjct: 578 tttgtctgggcagttttgattgctaacttggctcgaattggatacgaggagaaaaccatg 637

                                                        
Query: 393 tacatggctgcttatgattggaggttatcattccagaacaccgag 437
           || |||||||| |||||||||||| |  | || ||||||||||||
Sbjct: 638 tatatggctgcatatgattggaggcttgcctttcagaacaccgag 682
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>ref|NM_114352.1| Arabidopsis thaliana phosphatidylcholine-sterol O-acyltransferase
           AT3G44830 mRNA, complete cds
          Length = 1998

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 369 attggatatgaagaaaagaacatgtacatggctgcttatgattggaggttatcattccag 428
           |||||||||||||  |||||| |  |||||||  |||||||||||||  | || ||||| 
Sbjct: 550 attggatatgaaggcaagaaccttcacatggcctcttatgattggagactctctttccat 609

                    
Query: 429 aacaccgag 437
           |||||||||
Sbjct: 610 aacaccgag 618
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>emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28D10
          Length = 49890

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                         
Query: 369   attggatatgaagaaaagaacatgtacatggctgcttatgattggaggttatcattccag 428
             |||||||||||||  |||||| |  |||||||  |||||||||||||  | || ||||| 
Sbjct: 10723 attggatatgaaggcaagaaccttcacatggcctcttatgattggagactctctttccat 10782

                      
Query: 429   aacaccgag 437
             |||||||||
Sbjct: 10783 aacaccgag 10791
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>gb|AC151718.5| Mus musculus BAC clone RP23-142J2 from chromosome 7, complete sequence
          Length = 213292

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 388   acatgtacatggctgcttatg 408
             |||||||||||||||||||||
Sbjct: 95467 acatgtacatggctgcttatg 95487
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>gb|AC006228.5|AC006228 Genomic sequence for Arabidopsis thaliana BAC F5J5, complete sequence
          Length = 104806

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 378   gaagaaaagaacatgtacatg 398
             |||||||||||||||||||||
Sbjct: 61529 gaagaaaagaacatgtacatg 61549
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>gb|AC119291.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0052K01,
              complete sequence
          Length = 144395

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    ttggatatgaagaaaagaac 389
              ||||||||||||||||||||
Sbjct: 121109 ttggatatgaagaaaagaac 121090
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>gb|AC102369.21| Mus musculus chromosome 12, clone RP23-246F14, complete sequence
          Length = 214580

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    aacatatgtcattggacaatgaaa 255
              |||||||||||||||| |||||||
Sbjct: 150968 aacatatgtcattggaaaatgaaa 150991
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>emb|AL591410.8| Mouse DNA sequence from clone RP23-96I2 on chromosome 11 Contains part of
              the Myo1d gene for myosin ID, complete sequence
          Length = 231675

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    atgtcattggacaatgaaac 256
              ||||||||||||||||||||
Sbjct: 224742 atgtcattggacaatgaaac 224723
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>ref|NM_204954.1| Gallus gallus ectonucleoside triphosphate diphosphohydrolase 2
            (ENTPD2), mRNA
          Length = 2352

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tcaagctgcagaaggagggg 77
            ||||||||||||||||||||
Sbjct: 1693 tcaagctgcagaaggagggg 1712
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>gb|AC077689.9| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-301H20, complete
             sequence
          Length = 213462

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   tgaaactggattagataaac 270
             ||||||||||||||||||||
Sbjct: 24696 tgaaactggattagataaac 24677
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>gb|AC068627.16| Mus Musculus Chromosome 5 RP23-389F6, complete sequence
          Length = 180673

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    tgaaactggattagataaac 270
              ||||||||||||||||||||
Sbjct: 146484 tgaaactggattagataaac 146465
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>emb|CR387679.1| Gallus gallus finished cDNA, clone ChEST73j19
          Length = 1046

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 58  tcaagctgcagaaggagggg 77
           ||||||||||||||||||||
Sbjct: 272 tcaagctgcagaaggagggg 291
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 370      ttggatatgaagaaaagaac 389
                ||||||||||||||||||||
Sbjct: 26607634 ttggatatgaagaaaagaac 26607615
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>gb|AC019208.8| Homo sapiens BAC clone RP11-439J5 from 2, complete sequence
          Length = 188164

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   gggcagtcctgattgccaat 359
             ||||||||||||||||||||
Sbjct: 73253 gggcagtcctgattgccaat 73272
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>gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome 9, complete sequence
          Length = 192639

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gctgggttgaacatatgtcattgg 246
              |||||||||||| |||||||||||
Sbjct: 183331 gctgggttgaacctatgtcattgg 183354
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>gb|U74467.1|GGU74467 Gallus gallus cell membrane ecto-ATPase mRNA, complete cds
          Length = 2352

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   tcaagctgcagaaggagggg 77
            ||||||||||||||||||||
Sbjct: 1693 tcaagctgcagaaggagggg 1712
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>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence
          Length = 193235

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gctgggttgaacatatgtcattgg 246
              |||||||||||| |||||||||||
Sbjct: 104746 gctgggttgaacctatgtcattgg 104769
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>gb|M59302.1|RBLCYCA R.viridis cytochrome C2 gene, complete cds
          Length = 660

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  tcatcttcgtgccggggatc 116
           ||||||||||||||||||||
Sbjct: 387 tcatcttcgtgccggggatc 368


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,472,440
Number of Sequences: 3902068
Number of extensions: 3472440
Number of successful extensions: 60752
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60652
Number of HSP's gapped (non-prelim): 96
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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