>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein|
          Length = 210

 Score =  302 bits (773), Expect = 4e-82
 Identities = 138/162 (85%), Positives = 143/162 (88%)
 Frame = +2

Query: 26  VFGTPISEKTVIATGEYKEPITQKDVADYTMKMINAGGKDINAQTFVDNLKERYGNGIAV 205
           VFGTPIS +TVIATGEYKEPITQKDVADY MKMINAGGKD+NAQ FVDNLKERYGNGIAV
Sbjct: 5   VFGTPISAQTVIATGEYKEPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYGNGIAV 64

Query: 206 KCLIYNATGATLSLAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXXXXYR 385
           KCL+YNATGATL+ AKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHP            YR
Sbjct: 65  KCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAGAVVYR 124

Query: 386 SKIPSSPRSCDWLFSWTVPYIGANGVYTEIREEGHYPNVGSW 511
           SKIPSS  SCDWLFSWTVPYIG NGVYTEIREEGHYP+VGSW
Sbjct: 125 SKIPSSSSSCDWLFSWTVPYIGGNGVYTEIREEGHYPSVGSW 166

>JIPH_ATRCA (P42764) Jasmonate-induced protein homolog|
          Length = 185

 Score = 36.2 bits (82), Expect = 0.053
 Identities = 33/143 (23%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
 Frame = +2

Query: 116 MKMINAGGKDINAQTFVDNLKERYGN-GIAVKCL------IYNATGATLSLAKYNDWHGH 274
           M    A G     +  VD + E+  N G+ V+        + N T  +++  + ++W G 
Sbjct: 1   MASTQAMGMTEQQKKSVDEMVEKATNMGVNVQAQNSAVVSMINQTNVSMTFNENHNWSGS 60

Query: 275 IYDTPYPSDIQNGQWGAFLHVHPXXXXXXXXXXXXYRSKIPSSPRSCDWLFSWTVPY--- 445
           +  T YP  I   Q   F+H               Y S     P  C WL +W  P    
Sbjct: 61  VVGTGYPKSIPTKQSRQFIH-QGDAKDGSQGAVVYYGSNANGEP--CGWLLAWCAPTNVT 117

Query: 446 -IGANGVYTEIREEGHYPNVGSW 511
               N VY +   +  +  + SW
Sbjct: 118 PTKPNRVYVDCGAQSKFDTI-SW 139

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 390 RSPPAPGPAIGCSPGPSPTLVPTGCTPKSV 479
           + PPAPGP+    P PSP   P    PK V
Sbjct: 55  KPPPAPGPSPKPGPSPSPPKPPPSPAPKPV 84

>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +3

Query: 396 PPAPGPAIGCSPGPSPTLVPTGCTP 470
           PPAPGPA    P P P  VPT C P
Sbjct: 848 PPAPGPA----PPPVPAAVPTLCLP 868

>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = +3

Query: 381 IVARSPPAPGPAIGCSPGPSPTLVPTGCTPKSVRKDTT 494
           +V R PP P PA   SPGP P   P G  P S R   T
Sbjct: 757 LVRRPPPGPAPA-AASPGPPPPASPPG-APASPRAPRT 792

>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 381 IVARSPPAPGPAIGCSPGPSPTLVPTGCTP 470
           +V+ S P P P +G  PGP P   P    P
Sbjct: 294 VVSPSHPPPAPPLGSPPGPKPGFAPPPAPP 323

>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)|
           (Forkhead-related transcription factor 9) (FREAC-9)
          Length = 497

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 387 ARSPPAPGPAIGCSPGPSPTLVP 455
           A S PAP PA G  PGP P  +P
Sbjct: 333 AGSAPAPAPASGSGPGPGPAGLP 355

>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 393 SPPAPGPAIGCSPGPSPTLVPTGCTPKS 476
           +PPA  P  G  PGP PT  P    P +
Sbjct: 127 APPANPPTTGAPPGPGPTPTPPPAVPST 154

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +3

Query: 396 PPAPGPAIGCSPGPSPTLVPTGCTP 470
           P APGPA    P P PT VPT C P
Sbjct: 846 PAAPGPA----PPPVPTAVPTLCLP 866

>ACTY_DROME (P45891) Actin-like protein 53D|
          Length = 376

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -1

Query: 274 MAVPIVVLSQAQSGTSGIVDEAFYSYSVTVPLFE-IVDEGLCVNILTTGVDHLHGIVCNI 98
           +AV  V+   A   T GIV ++    + TVP++E       CV +   G D L   +C +
Sbjct: 139 VAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRD-LTDYLCKL 197

Query: 97  LLSNGFLILTSGYHRLLR 44
           LL  G  + TS    ++R
Sbjct: 198 LLERGVTMGTSAEREIVR 215

>CSKI1_RAT (Q8VHK2) Caskin-1 (CASK-interacting protein 1)|
          Length = 1430

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = +3

Query: 396 PPAPGPAIGCSPGPSPTLVPTGCTP 470
           PPAPGP     P P P  VPT C P
Sbjct: 847 PPAPGPV----PPPVPAAVPTLCLP 867

>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)|
          Length = 279

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 399 PAPGPAIGCSPGPSPTLVPT 458
           P P PA+  +P PSPTL PT
Sbjct: 71  PTPTPALSPTPTPSPTLSPT 90

>ACFD_ECOLI (Q46837) Putative lipoprotein acfD homolog precursor|
          Length = 1520

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +2

Query: 77  KEPITQKDVADYTMKMINAGGKDINAQTFVDNLKERYGNGIAVKCLIYNATGATLSLAK 253
           K  +TQ+DV D  +  +N GG  +  +  + NLKE   +G      + +A G +++L K
Sbjct: 702 KPKLTQQDVTDL-IAYLNKGGSVLIMENVMSNLKEESASGFV---RLLDAAGLSMALNK 756

>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = +3

Query: 387 ARSPPAPG--PAIGCSPGPSPTLVPTGCTPK 473
           A  PP PG  P  G  PGP P  VP    PK
Sbjct: 49  AAGPPTPGLGPVPGPGPGPGPGSVPRRLDPK 79

>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +3

Query: 381 IVARSPPAPGPAIGCSPGPSP 443
           + AR+ P PGP  G  PGP P
Sbjct: 166 LAARAGPGPGPGPGPGPGPGP 186

>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)|
           (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite
           motif protein 33)
          Length = 1127

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 393 SPPAPGPAIGCSPGPSPTLVPT 458
           S PAPGP+ G  PGP  +L+ T
Sbjct: 103 SAPAPGPSAGPPPGPPASLLDT 124

>SMCA2_HUMAN (P51531) Probable global transcription activator SNF2L2 (EC|
           3.6.1.-) (ATP-dependent helicase SMARCA2) (SNF2-alpha)
           (SWI/SNF-related matrix associated actin dependent
           regulator of chromatin subfamily A member 2) (hBRM)
          Length = 1586

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 399 PAPGPAIGCSPGPSPT 446
           P+PGP +G SPGP P+
Sbjct: 21  PSPGPILGPSPGPGPS 36

>KCNK9_MOUSE (Q3LS21) Potassium channel subfamily K member 9 (Acid-sensitive|
           potassium channel protein TASK-3) (TWIK-related
           acid-sensitive K(+) channel 3)
          Length = 402

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 393 SPPAPGPAIGCSPGPSPTLVPTGCTPKSVR 482
           S PAP PA    P P+P  V  G T +SVR
Sbjct: 328 SAPAPAPA----PAPAPAAVAAGATIRSVR 353

>PHTF_DROME (Q9V9A8) Putative homeodomain transcription factor|
          Length = 880

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 399 PAPGPAIGCSPGPSPTLVPTGCTPKSVRKDTTQ 497
           P P P + C+  P PT  PT  +P  +R+ T +
Sbjct: 261 PLPSPTVTCATVPDPT-TPTTPSPSVIRRSTNE 292

>POT22_HUMAN (Q6S545) Prostate, ovary, testis expressed protein on chromosome 22|
          Length = 288

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 301 YSEWAMGCIPPRPPKWCCGWFSWCR 375
           + + AM  +  +  KWCC  F WCR
Sbjct: 49  HDDSAMKTLRSKMGKWCCHCFPWCR 73

>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48)
          Length = 1692

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 396  PPAPGPAIGCSPGPSPTLVPTGCTPKSVR 482
            PP P P +   P PSP  +    TP S+R
Sbjct: 1098 PPHPHPTLAYGPAPSPRPLGPQATPVSIR 1126

>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC|
           3.1.3.48) (His-domain-containing protein tyrosine
           phosphatase) (HD-PTP) (Protein tyrosine phosphatase
           TD14) (PTP-TD14) (Fragment)
          Length = 1499

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 396 PPAPGPAIGCSPGPSPTLVPTGCTPKSVR 482
           PP P P +   P PSP  +    TP S+R
Sbjct: 905 PPHPHPTLAYGPAPSPRPLGPQATPVSIR 933

>MMP2_CHICK (Q90611) 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72|
           kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2)
           (Gelatinase A)
          Length = 663

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 405 PGPAIGCSPGPSPTLVPTGCTPKSVRKD 488
           PGP  G  PGP PTL P   TP+  + D
Sbjct: 450 PGPGPGPGPGPRPTLGPV--TPELCKHD 475

>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor|
           (Salivary protein MSG1)
          Length = 147

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 396 PPAPGPAIGCSPGPSPTLVPTGCTPKSVRKDT 491
           PP P P    SP P+P++ PTG  P +V+  T
Sbjct: 83  PPHPRPPSNPSPPPTPSIPPTG-PPTTVQATT 113

>OI106_HUMAN (Q9UPV9) 106 kDa O-GlcNAc transferase-interacting protein|
           (Trafficking protein, kinesin-binding 1)
          Length = 953

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 408 GPAIGCSPGPSPTLVPTGCTPKSV 479
           GP +   PGP+P LVP G  P+ +
Sbjct: 871 GPLLCGPPGPAPALVPRGLVPEGL 894

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 396 PPAPGPAIGCSPGPSPTLVPTGCTPK 473
           PP PGP  G  PGP P        PK
Sbjct: 57  PPVPGPGPGPGPGPGPGSTSRRLDPK 82


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,851,319
Number of Sequences: 219361
Number of extensions: 1850752
Number of successful extensions: 7868
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7749
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)