| Clone Name | bags30a06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1188 Score = 436 bits (220), Expect = e-119 Identities = 505/600 (84%) Strand = Plus / Plus Query: 7 ggttatgttccttctctggactatgttataaaagacatggaagtacttcttgataaaatt 66 |||||||| ||||| || || |||||| || |||| || || |||||||||| ||||||| Sbjct: 550 ggttatgtgccttcactagattatgttgtagaagatatagatgtacttcttggtaaaatt 609 Query: 67 atgctggagaatccagatgttccttgttttctactcggccactccactggtggagctgtt 126 |||| |||||||||| || || |||||||| || || ||||||||||||||||||||| Sbjct: 610 gtgcttgagaatccaggggtcccctgttttcttcttggtcactccactggtggagctgtt 669 Query: 127 gttttgaaggcatcgctgtacgcccatatcagaaccagactggaagggatcatcctgact 186 |||||||||||||| ||| | | | ||||||| | | ||||||||| |||||||| ||| Sbjct: 670 gttttgaaggcatcattgttccctcgtatcagagcaaaactggaaggcatcatcctaact 729 Query: 187 tcaccagctgtgcgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattc 246 ||||||||| ||||||||||||| || ||||| || || ||||| ||||| || |||||| Sbjct: 730 tcaccagctctgcgtgtaaaacctgctcatcccattgtaggggctgtggcgccaatattc 789 Query: 247 tctctgattgcacccaagttccaattcaagggagccaacaagcggggcatcccggtgtcc 306 |||||| | ||||| ||||| || ||||||||||| |||||| | ||||||||||||||| Sbjct: 790 tctctgttagcaccaaagtttcagttcaagggagctaacaagagaggcatcccggtgtcc 849 Query: 307 cgcgaccctgcggcgctgctagcaaagtactctgacccgctggtctacacggggccgatc 366 |||||||| || || |||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 850 cgcgacccggctgccctgctagcgaagtactccgatccgctggtttacaccgggccgatc 909 Query: 367 agggtccgtacgggccacgagatcctgcgcatctcctcctacctgctgcacaacctgaag 426 || || || || ||||| || ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 910 agagttcggaccggccatgaaatcctacgcatctcctcctacctgctgcacaacttgaag 969 Query: 427 aaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgggtgacggacccgctg 486 ||||| || ||||| || ||||||| || || || || ||||||||||| ||||| ||| Sbjct: 970 aaggtcaccgtcccattcatggtcctccatggaaccgcagaccgggtgaccgaccccctg 1029 Query: 487 gcctcgcaggagctctacagggaggcggcgtcgaggcacaaggacctgcggctgtacgag 546 || || ||||| ||||||| ||||| | |||||||||||||| ||| |||||||||| Sbjct: 1030 gcttcacaggacctctacaacgaggcctcatcgaggcacaaggatctgaggctgtacgat 1089 Query: 547 gggttcctgcacgacctgctcttcgaacccgagcgcgacgagatcgccgccgacatcatc 606 |||||| ||||||| |||||||| || || ||||| || ||||||||| | ||||||||| Sbjct: 1090 gggttcttgcacgatctgctctttgagcctgagcgtgatgagatcgccacagacatcatc 1149
>dbj|AK070748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068O10, full insert sequence Length = 2538 Score = 436 bits (220), Expect = e-119 Identities = 505/600 (84%) Strand = Plus / Plus Query: 7 ggttatgttccttctctggactatgttataaaagacatggaagtacttcttgataaaatt 66 |||||||| ||||| || || |||||| || |||| || || |||||||||| ||||||| Sbjct: 1670 ggttatgtgccttcactagattatgttgtagaagatatagatgtacttcttggtaaaatt 1729 Query: 67 atgctggagaatccagatgttccttgttttctactcggccactccactggtggagctgtt 126 |||| |||||||||| || || |||||||| || || ||||||||||||||||||||| Sbjct: 1730 gtgcttgagaatccaggggtcccctgttttcttcttggtcactccactggtggagctgtt 1789 Query: 127 gttttgaaggcatcgctgtacgcccatatcagaaccagactggaagggatcatcctgact 186 |||||||||||||| ||| | | | ||||||| | | ||||||||| |||||||| ||| Sbjct: 1790 gttttgaaggcatcattgttccctcgtatcagagcaaaactggaaggcatcatcctaact 1849 Query: 187 tcaccagctgtgcgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattc 246 ||||||||| ||||||||||||| || ||||| || || ||||| ||||| || |||||| Sbjct: 1850 tcaccagctctgcgtgtaaaacctgctcatcccattgtaggggctgtggcgccaatattc 1909 Query: 247 tctctgattgcacccaagttccaattcaagggagccaacaagcggggcatcccggtgtcc 306 |||||| | ||||| ||||| || ||||||||||| |||||| | ||||||||||||||| Sbjct: 1910 tctctgttagcaccaaagtttcagttcaagggagctaacaagagaggcatcccggtgtcc 1969 Query: 307 cgcgaccctgcggcgctgctagcaaagtactctgacccgctggtctacacggggccgatc 366 |||||||| || || |||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 1970 cgcgacccggctgccctgctagcgaagtactccgatccgctggtttacaccgggccgatc 2029 Query: 367 agggtccgtacgggccacgagatcctgcgcatctcctcctacctgctgcacaacctgaag 426 || || || || ||||| || ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 2030 agagttcggaccggccatgaaatcctacgcatctcctcctacctgctgcacaacttgaag 2089 Query: 427 aaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgggtgacggacccgctg 486 ||||| || ||||| || ||||||| || || || || ||||||||||| ||||| ||| Sbjct: 2090 aaggtcaccgtcccattcatggtcctccatggaaccgcagaccgggtgaccgaccccctg 2149 Query: 487 gcctcgcaggagctctacagggaggcggcgtcgaggcacaaggacctgcggctgtacgag 546 || || ||||| ||||||| ||||| | |||||||||||||| ||| |||||||||| Sbjct: 2150 gcttcacaggacctctacaacgaggcctcatcgaggcacaaggatctgaggctgtacgat 2209 Query: 547 gggttcctgcacgacctgctcttcgaacccgagcgcgacgagatcgccgccgacatcatc 606 |||||| ||||||| |||||||| || || ||||| || ||||||||| | ||||||||| Sbjct: 2210 gggttcttgcacgatctgctctttgagcctgagcgtgatgagatcgccacagacatcatc 2269
>dbj|AK068509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154B19, full insert sequence Length = 1485 Score = 436 bits (220), Expect = e-119 Identities = 505/600 (84%) Strand = Plus / Plus Query: 7 ggttatgttccttctctggactatgttataaaagacatggaagtacttcttgataaaatt 66 |||||||| ||||| || || |||||| || |||| || || |||||||||| ||||||| Sbjct: 613 ggttatgtgccttcactagattatgttgtagaagatatagatgtacttcttggtaaaatt 672 Query: 67 atgctggagaatccagatgttccttgttttctactcggccactccactggtggagctgtt 126 |||| |||||||||| || || |||||||| || || ||||||||||||||||||||| Sbjct: 673 gtgcttgagaatccaggggtcccctgttttcttcttggtcactccactggtggagctgtt 732 Query: 127 gttttgaaggcatcgctgtacgcccatatcagaaccagactggaagggatcatcctgact 186 |||||||||||||| ||| | | | ||||||| | | ||||||||| |||||||| ||| Sbjct: 733 gttttgaaggcatcattgttccctcgtatcagagcaaaactggaaggcatcatcctaact 792 Query: 187 tcaccagctgtgcgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattc 246 ||||||||| ||||||||||||| || ||||| || || ||||| ||||| || |||||| Sbjct: 793 tcaccagctctgcgtgtaaaacctgctcatcccattgtaggggctgtggcgccaatattc 852 Query: 247 tctctgattgcacccaagttccaattcaagggagccaacaagcggggcatcccggtgtcc 306 |||||| | ||||| ||||| || ||||||||||| |||||| | ||||||||||||||| Sbjct: 853 tctctgttagcaccaaagtttcagttcaagggagctaacaagagaggcatcccggtgtcc 912 Query: 307 cgcgaccctgcggcgctgctagcaaagtactctgacccgctggtctacacggggccgatc 366 |||||||| || || |||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 913 cgcgacccggctgccctgctagcgaagtactccgatccgctggtttacaccgggccgatc 972 Query: 367 agggtccgtacgggccacgagatcctgcgcatctcctcctacctgctgcacaacctgaag 426 || || || || ||||| || ||||| ||||||||||||||||||||||||||| ||||| Sbjct: 973 agagttcggaccggccatgaaatcctacgcatctcctcctacctgctgcacaacttgaag 1032 Query: 427 aaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgggtgacggacccgctg 486 ||||| || ||||| || ||||||| || || || || ||||||||||| ||||| ||| Sbjct: 1033 aaggtcaccgtcccattcatggtcctccatggaaccgcagaccgggtgaccgaccccctg 1092 Query: 487 gcctcgcaggagctctacagggaggcggcgtcgaggcacaaggacctgcggctgtacgag 546 || || ||||| ||||||| ||||| | |||||||||||||| ||| |||||||||| Sbjct: 1093 gcttcacaggacctctacaacgaggcctcatcgaggcacaaggatctgaggctgtacgat 1152 Query: 547 gggttcctgcacgacctgctcttcgaacccgagcgcgacgagatcgccgccgacatcatc 606 |||||| ||||||| |||||||| || || ||||| || ||||||||| | ||||||||| Sbjct: 1153 gggttcttgcacgatctgctctttgagcctgagcgtgatgagatcgccacagacatcatc 1212
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 283 bits (143), Expect = 4e-73 Identities = 317/375 (84%) Strand = Plus / Minus Query: 232 gtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaacaagcgg 291 ||||| || |||||||||||| | ||||| ||||| || ||||||||||| |||||| | Sbjct: 5389484 gtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaacaagaga 5389425 Query: 292 ggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgacccgctggtc 351 ||||||||||||||||||||||| || || |||||||| |||||||| || |||||||| Sbjct: 5389424 ggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatccgctggtt 5389365 Query: 352 tacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctcctacctg 411 ||||| ||||||||||| || || || ||||| || ||||| |||||||||||||||||| Sbjct: 5389364 tacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctcctacctg 5389305 Query: 412 ctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgg 471 ||||||||| |||||||||| || ||||| || ||||||| || || || || |||||| Sbjct: 5389304 ctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgcagaccgg 5389245 Query: 472 gtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggcacaaggac 531 ||||| ||||| ||||| || ||||| ||||||| ||||| | |||||||||||||| Sbjct: 5389244 gtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggcacaaggat 5389185 Query: 532 ctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcgacgagatc 591 ||| |||||||||| |||||| ||||||| |||||||| || || ||||| || |||||| Sbjct: 5389184 ctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtgatgagatc 5389125 Query: 592 gccgccgacatcatc 606 ||| | ||||||||| Sbjct: 5389124 gccacagacatcatc 5389110 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 49 gtacttcttgataaaattatgctggagaatccagatgttccttgttttctactcggccac 108 |||||||||| ||||||| |||| |||||||||| || || |||||||| || || ||| Sbjct: 5390387 gtacttcttggtaaaattgtgcttgagaatccaggggtcccctgttttcttcttggtcac 5390328 Query: 109 tccactggtggagctgttgttttgaagg 136 |||||||||||||||||||||||||||| Sbjct: 5390327 tccactggtggagctgttgttttgaagg 5390300 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 49 gtacttcttgataaaattatgctggagaatccagatgttccttgttttctactcggccac 108 |||||||||| ||||||| |||| |||||||||| || | |||||||| || || ||| Sbjct: 41555072 gtacttcttggtaaaattgtgcttgagaatccaggggtcctctgttttcttcttggtcac 41555131 Query: 109 tccactggtggagctgttgttttgaagg 136 |||||||| ||||||||||||||||||| Sbjct: 41555132 tccactgggggagctgttgttttgaagg 41555159 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 165 actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatcc 218 ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| Sbjct: 5390036 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcc 5389983 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 151 catatcagaaccagactggaagggatcatcctgacttcaccagc 194 ||||||||| | | ||||||||| |||||||| ||||||||||| Sbjct: 41555417 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 41555460
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 283 bits (143), Expect = 4e-73 Identities = 317/375 (84%) Strand = Plus / Minus Query: 232 gtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaacaagcgg 291 ||||| || |||||||||||| | ||||| ||||| || ||||||||||| |||||| | Sbjct: 140828 gtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaacaagaga 140769 Query: 292 ggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgacccgctggtc 351 ||||||||||||||||||||||| || || |||||||| |||||||| || |||||||| Sbjct: 140768 ggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatccgctggtt 140709 Query: 352 tacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctcctacctg 411 ||||| ||||||||||| || || || ||||| || ||||| |||||||||||||||||| Sbjct: 140708 tacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctcctacctg 140649 Query: 412 ctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgg 471 ||||||||| |||||||||| || ||||| || ||||||| || || || || |||||| Sbjct: 140648 ctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgcagaccgg 140589 Query: 472 gtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggcacaaggac 531 ||||| ||||| ||||| || ||||| ||||||| ||||| | |||||||||||||| Sbjct: 140588 gtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggcacaaggat 140529 Query: 532 ctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcgacgagatc 591 ||| |||||||||| |||||| ||||||| |||||||| || || ||||| || |||||| Sbjct: 140528 ctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtgatgagatc 140469 Query: 592 gccgccgacatcatc 606 ||| | ||||||||| Sbjct: 140468 gccacagacatcatc 140454 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 49 gtacttcttgataaaattatgctggagaatccagatgttccttgttttctactcggccac 108 |||||||||| ||||||| |||| |||||||||| || || |||||||| || || ||| Sbjct: 141731 gtacttcttggtaaaattgtgcttgagaatccaggggtcccctgttttcttcttggtcac 141672 Query: 109 tccactggtggagctgttgttttgaagg 136 |||||||||||||||||||||||||||| Sbjct: 141671 tccactggtggagctgttgttttgaagg 141644 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 165 actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatcc 218 ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| Sbjct: 141380 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcc 141327
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 49 gtacttcttgataaaattatgctggagaatccagatgttccttgttttctactcggccac 108 |||||||||| ||||||| |||| |||||||||| || | |||||||| || || ||| Sbjct: 111365 gtacttcttggtaaaattgtgcttgagaatccaggggtcctctgttttcttcttggtcac 111424 Query: 109 tccactggtggagctgttgttttgaagg 136 |||||||| ||||||||||||||||||| Sbjct: 111425 tccactgggggagctgttgttttgaagg 111452 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 151 catatcagaaccagactggaagggatcatcctgacttcaccagc 194 ||||||||| | | ||||||||| |||||||| ||||||||||| Sbjct: 111710 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 111753
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 49 gtacttcttgataaaattatgctggagaatccagatgttccttgttttctactcggccac 108 |||||||||| ||||||| |||| |||||||||| || | |||||||| || || ||| Sbjct: 123271 gtacttcttggtaaaattgtgcttgagaatccaggggtcctctgttttcttcttggtcac 123330 Query: 109 tccactggtggagctgttgttttgaagg 136 |||||||| ||||||||||||||||||| Sbjct: 123331 tccactgggggagctgttgttttgaagg 123358 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 151 catatcagaaccagactggaagggatcatcctgacttcaccagc 194 ||||||||| | | ||||||||| |||||||| ||||||||||| Sbjct: 123616 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 123659
>ref|XM_450903.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 103 ggccactccactggtggagctgttgttttgaaggca 138 ||||||||||| ||||||||| |||||||||||||| Sbjct: 370 ggccactccacaggtggagctattgttttgaaggca 405
>gb|AF039531.1|AF039531 Oryza sativa lysophospholipase homolog (LPL1) mRNA, complete cds Length = 1224 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 103 ggccactccactggtggagctgttgttttgaaggca 138 ||||||||||| ||||||||| |||||||||||||| Sbjct: 415 ggccactccacaggtggagctattgttttgaaggca 450
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 103 ggccactccactggtggagctgttgttttgaagg 136 ||||||||||| ||||||||| |||||||||||| Sbjct: 13642461 ggccactccacaggtggagctattgttttgaagg 13642428
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 103 ggccactccactggtggagctgttgttttgaagg 136 ||||||||||| ||||||||| |||||||||||| Sbjct: 79877 ggccactccacaggtggagctattgttttgaagg 79844
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 103 ggccactccactggtggagctgttgttttgaagg 136 ||||||||||| ||||||||| |||||||||||| Sbjct: 40575 ggccactccacaggtggagctattgttttgaagg 40542
>ref|NM_121203.2| Arabidopsis thaliana catalytic/ hydrolase AT5G11650 mRNA, complete cds Length = 1571 Score = 48.1 bits (24), Expect = 0.036 Identities = 138/176 (78%) Strand = Plus / Plus Query: 199 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 258 ||||| ||||| || ||||| || ||||||||| | || || || ||||| || | ||| Sbjct: 798 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 857 Query: 259 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 318 || | |||||||||||| ||||| |||||| | ||||| ||||| || | ||||||| Sbjct: 858 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 917 Query: 319 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 374 || || |||| ||||||||||| ||| | |||||||| || ||||| || ||||| Sbjct: 918 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 973 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cactccactggtggagctgttgttttgaaggca 138 ||||| || ||||||||||| |||||||||||| Sbjct: 705 cactctaccggtggagctgtggttttgaaggca 737 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 601 tgcatggttatgttccttctcttgattatgtt 632
>emb|BX831480.1|CNS09ZGU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1363 Score = 48.1 bits (24), Expect = 0.036 Identities = 138/176 (78%) Strand = Plus / Plus Query: 199 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 258 ||||| ||||| || ||||| || ||||||||| | || || || ||||| || | ||| Sbjct: 789 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 848 Query: 259 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 318 || | |||||||||||| ||||| |||||| | ||||| ||||| || | ||||||| Sbjct: 849 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 908 Query: 319 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 374 || || |||| ||||||||||| ||| | |||||||| || ||||| || ||||| Sbjct: 909 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 964 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cactccactggtggagctgttgttttgaaggca 138 ||||| || ||||||||||| |||||||||||| Sbjct: 696 cactctaccggtggagctgtggttttgaaggca 728 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 592 tgcatggttatgttccttctcttgattatgtt 623
>emb|BX831759.1|CNS09YN1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1317 Score = 48.1 bits (24), Expect = 0.036 Identities = 138/176 (78%) Strand = Plus / Plus Query: 199 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 258 ||||| ||||| || ||||| || ||||||||| | || || || ||||| || | ||| Sbjct: 779 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 838 Query: 259 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 318 || | |||||||||||| ||||| |||||| | ||||| ||||| || | ||||||| Sbjct: 839 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 898 Query: 319 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 374 || || |||| ||||||||||| ||| | |||||||| || ||||| || ||||| Sbjct: 899 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 954 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cactccactggtggagctgttgttttgaaggca 138 ||||| || ||||||||||| |||||||||||| Sbjct: 686 cactctaccggtggagctgtggttttgaaggca 718 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 582 tgcatggttatgttccttctcttgattatgtt 613
>emb|BX830277.1|CNS09YO7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB6ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1296 Score = 48.1 bits (24), Expect = 0.036 Identities = 138/176 (78%) Strand = Plus / Plus Query: 199 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 258 ||||| ||||| || ||||| || ||||||||| | || || || ||||| || | ||| Sbjct: 734 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 793 Query: 259 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 318 || | |||||||||||| ||||| |||||| | ||||| ||||| || | ||||||| Sbjct: 794 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 853 Query: 319 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 374 || || |||| ||||||||||| ||| | |||||||| || ||||| || ||||| Sbjct: 854 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 909 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cactccactggtggagctgttgttttgaaggca 138 ||||| || ||||||||||| |||||||||||| Sbjct: 641 cactctaccggtggagctgtggttttgaaggca 673 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 537 tgcatggttatgttccttctcttgattatgtt 568
>gb|AY085467.1| Arabidopsis thaliana clone 15284 mRNA, complete sequence Length = 1406 Score = 48.1 bits (24), Expect = 0.036 Identities = 138/176 (78%) Strand = Plus / Plus Query: 199 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 258 ||||| ||||| || ||||| || ||||||||| | || || || ||||| || | ||| Sbjct: 798 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 857 Query: 259 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 318 || | |||||||||||| ||||| |||||| | ||||| ||||| || | ||||||| Sbjct: 858 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 917 Query: 319 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 374 || || |||| ||||||||||| ||| | |||||||| || ||||| || ||||| Sbjct: 918 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 973 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cactccactggtggagctgttgttttgaaggca 138 ||||| || ||||||||||| |||||||||||| Sbjct: 705 cactctaccggtggagctgtggttttgaaggca 737 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 601 tgcatggttatgttccttctcttgattatgtt 632
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence Length = 112873 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 328 gcaaagtactctgacccgctggtctacacggggcc 362 |||||||||||||| || ||||||||||| ||||| Sbjct: 82206 gcaaagtactctgatcctctggtctacacagggcc 82240
>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project) Length = 93205 Score = 46.1 bits (23), Expect = 0.14 Identities = 89/111 (80%) Strand = Plus / Plus Query: 264 gttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcggcgct 323 |||||||||||| ||||| |||||| | ||||| ||||| || | ||||||| || || Sbjct: 25399 gttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaagctct 25458 Query: 324 gctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 374 |||| ||||||||||| ||| | |||||||| || ||||| || ||||| Sbjct: 25459 cttagccaagtactctgatccgttagtctacactggtccgattagagtccg 25509 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 24848 tgcatggttatgttccttctcttgattatgtt 24879
>gb|AE009080.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 106 of 256 of the complete sequence Length = 10277 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 582 cgacgagatcgccgccgacatc 603 |||||||||||||||||||||| Sbjct: 7949 cgacgagatcgccgccgacatc 7928
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 582 cgacgagatcgccgccgacatc 603 |||||||||||||||||||||| Sbjct: 4499473 cgacgagatcgccgccgacatc 4499452
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 582 cgacgagatcgccgccgacatc 603 |||||||||||||||||||||| Sbjct: 192686 cgacgagatcgccgccgacatc 192665
>gb|AE012028.1| Xanthomonas axonopodis pv. citri str. 306, section 406 of 469 of the complete genome Length = 10029 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 582 cgacgagatcgccgccgacatc 603 |||||||||||||||||||||| Sbjct: 2885 cgacgagatcgccgccgacatc 2864
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 582 cgacgagatcgccgccgacatc 603 |||||||||||||||||||||| Sbjct: 1167646 cgacgagatcgccgccgacatc 1167625
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 165 actggaagggatcatcctgacttcaccagc 194 ||||||||| |||||||| ||||||||||| Sbjct: 22269025 actggaaggcatcatcctaacttcaccagc 22269054
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 558 cgacctgctcttcgaacccgag 579 |||||||||||||||||||||| Sbjct: 474373 cgacctgctcttcgaacccgag 474352
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 165 actggaagggatcatcctgacttcaccagc 194 ||||||||| |||||||| ||||||||||| Sbjct: 27669 actggaaggcatcatcctaacttcaccagc 27698
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 cgacgagatcgccgccgacatc 603 |||||||||||||||||||||| Sbjct: 4017643 cgacgagatcgccgccgacatc 4017664 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 gcgcgacgagatcgccgccg 598 |||||||||||||||||||| Sbjct: 5245098 gcgcgacgagatcgccgccg 5245079 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cgagcgcgacgagatcgccg 595 |||||||||||||||||||| Sbjct: 1653041 cgagcgcgacgagatcgccg 1653022
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 acgagatcgccgccgacatca 604 ||||||||||||||||||||| Sbjct: 238284 acgagatcgccgccgacatca 238264
>emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in linkage group 1, complete sequence Length = 194023 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 tgacttcaccagctgtgcgtgtaaa 206 ||||||| ||||||||||||||||| Sbjct: 54625 tgacttctccagctgtgcgtgtaaa 54601
>emb|BX830105.1|CNS0A068 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 106 cactccactggtggagctgttgttttgaaggca 138 ||||| || ||||||||||| |||||||||||| Sbjct: 652 cactctaccggtggagctgtggttttgaaggca 684 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 tgcacggttatgttccttctctggactatgtt 33 |||| ||||||||||||||||| || |||||| Sbjct: 548 tgcatggttatgttccttctcttgattatgtt 579
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 576 cgagcgcgacgagatcgccgccgac 600 |||||||| |||||||||||||||| Sbjct: 2091194 cgagcgcggcgagatcgccgccgac 2091170
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 578 agcgcgacgagatcgccgccg 598 ||||||||||||||||||||| Sbjct: 480516 agcgcgacgagatcgccgccg 480536
>emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 in linkage group 1, complete sequence Length = 211668 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 tgacttcaccagctgtgcgtgtaaa 206 ||||||| ||||||||||||||||| Sbjct: 69397 tgacttctccagctgtgcgtgtaaa 69373
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctggactatgttataaaagac 42 ||||||||||||||||||||| Sbjct: 2438187 ctggactatgttataaaagac 2438207
>gb|U60417.1|SPU60417 Streptomyces pristinaespiralis 4-dimethylamino-L-phenylalanine precursor biosynthesis (papA, papC, papB, papM) genes, complete cds Length = 4740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 gcggaccgggtgacggacccg 483 ||||||||||||||||||||| Sbjct: 2327 gcggaccgggtgacggacccg 2347
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctggactatgttataaaagac 42 ||||||||||||||||||||| Sbjct: 2415252 ctggactatgttataaaagac 2415272
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 2106197 agccaacaagctgggcatcccggt 2106174
>ref|XM_493741.2| Oryza sativa (japonica cultivar-group), mRNA Length = 887 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 576 cgagcgcgacgagatcgccgccga 599 ||||||||| |||||||||||||| Sbjct: 241 cgagcgcgaggagatcgccgccga 264
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 1275583 agccaacaagctgggcatcccggt 1275606
>gb|AY658256.1| Synthetic construct Peudomonas aeruginosa clone FLH052696.01F PA3656 gene, partial cds Length = 741 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 525 agccaacaagctgggcatcccggt 548
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 1694081 agccaacaagctgggcatcccggt 1694104
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 1523741 agccaacaagctgggcatcccggt 1523764
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 tcgaacccgagcgcgacgag 588 |||||||||||||||||||| Sbjct: 3090759 tcgaacccgagcgcgacgag 3090778
>gb|BT022174.1| Drosophila melanogaster IP01280 full insert cDNA Length = 1434 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 821 ctggagaatccagatgttcc 840
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctggactatgttataaaaga 41 |||||||||||||||||||| Sbjct: 2370773 ctggactatgttataaaaga 2370792
>gb|AC144563.15| Medicago truncatula clone mth2-5c24, complete sequence Length = 111376 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 167 tggaagggatcatcctgacttcac 190 |||||||||| ||||||||||||| Sbjct: 94564 tggaagggatgatcctgacttcac 94541
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 576 cgagcgcgacgagatcgccgccgacatc 603 |||||||| |||||||||||||| |||| Sbjct: 1754854 cgagcgcggcgagatcgccgccggcatc 1754881
>emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chromosome 11, complete sequence Length = 124112 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 gactggaagggatcatcctgactt 187 ||||||| |||||||||||||||| Sbjct: 83926 gactggatgggatcatcctgactt 83949
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 1348428 agccaacaagctgggcatcccggt 1348451
>gb|AC104140.5| Drosophila melanogaster X BAC RP98-9H13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191342 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 185193 ctggagaatccagatgttcc 185174
>gb|AC104145.7| Drosophila melanogaster X BAC RP98-30B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161569 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 20340 ctggagaatccagatgttcc 20321
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 Length = 1913118 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tttgtggtcctgcacggcac 461 |||||||||||||||||||| Sbjct: 1175660 tttgtggtcctgcacggcac 1175641
>ref|NM_080316.1| Drosophila melanogaster Helix loop helix protein 3B CG2655-RA (HLH3B), mRNA Length = 1353 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 834 ctggagaatccagatgttcc 853
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 576 cgagcgcgacgagatcgccgccga 599 |||||||||| ||||||||||||| Sbjct: 3049944 cgagcgcgacaagatcgccgccga 3049921
>gb|L20771.1|DROHELHELT Drosophila melanogaster helix-loop-helix transcription factor mRNA, partial cds Length = 1350 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 830 ctggagaatccagatgttcc 849
>dbj|AK044942.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130014M11 product:unclassifiable, full insert sequence Length = 1930 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 gactggaagggatcatcctgactt 187 ||||||| |||||||||||||||| Sbjct: 1324 gactggatgggatcatcctgactt 1347
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 576 cgagcgcgacgagatcgccgccga 599 ||||||||| |||||||||||||| Sbjct: 2245347 cgagcgcgaggagatcgccgccga 2245324
>emb|BX832067.1|CNS0A1XI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1272 Score = 40.1 bits (20), Expect = 8.8 Identities = 83/104 (79%) Strand = Plus / Plus Query: 199 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 258 ||||| ||||| || ||||| || ||||||||| | || || || ||||| || | ||| Sbjct: 780 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 839 Query: 259 cccaagttccaattcaagggagccaacaagcggggcatcccggt 302 || | |||||||||||| ||||| |||||| | ||||| ||||| Sbjct: 840 ccaaggttccaattcaaaggagcaaacaagagaggcattccggt 883 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 ggtggagctgttgttttgaaggca 138 ||||||||||| |||||||||||| Sbjct: 697 ggtggagctgtggttttgaaggca 720
>gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 of the complete genome Length = 14537 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 6923 agccaacaagctgggcatcccggt 6900
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gccaacaagcggggcatccc 299 |||||||||||||||||||| Sbjct: 2974843 gccaacaagcggggcatccc 2974824
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0535G04 Length = 154180 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 576 cgagcgcgacgagatcgccgccga 599 ||||||||| |||||||||||||| Sbjct: 104804 cgagcgcgaggagatcgccgccga 104781
>dbj|AK071423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098B10, full insert sequence Length = 887 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 576 cgagcgcgacgagatcgccgccga 599 ||||||||| |||||||||||||| Sbjct: 241 cgagcgcgaggagatcgccgccga 264
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 4502966 agccaacaagctgggcatcccggt 4502943
>gb|AE003425.3| Drosophila melanogaster chromosome X, section 9 of 74 of the complete sequence Length = 309053 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 46944 ctggagaatccagatgttcc 46925
>emb|AL024485.1|DMC155E2 Drosophila melanogaster cosmid clone 155E2 Length = 31180 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 ctggagaatccagatgttcc 89 |||||||||||||||||||| Sbjct: 17979 ctggagaatccagatgttcc 17960
>dbj|AB010087.1| Pseudomonas aeruginosa rpsB, tsf, pyrH, frr genes for ribosomal protein S2, elongation factor Ts, UMP kinase, ribosome recycling factor, complete cds Length = 4003 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 agccaacaagcggggcatcccggt 302 ||||||||||| |||||||||||| Sbjct: 787 agccaacaagctgggcatcccggt 810 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,442,574 Number of Sequences: 3902068 Number of extensions: 4442574 Number of successful extensions: 83439 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81708 Number of HSP's gapped (non-prelim): 1722 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)