ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29p19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT018219.1| Zea mays clone EL01N0561C01.c mRNA sequence 289 3e-75
2ref|NM_194084.1| Oryza sativa (japonica cultivar-group), mRNA 264 2e-67
3dbj|AK119532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
4dbj|AK065851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
5gb|AY111683.1| Zea mays CL4677_1 mRNA sequence 125 9e-26
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 3e-16
7gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom... 94 3e-16
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 3e-16
9gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 geno... 52 0.001
10emb|X84319.1|STTYKY1 S.tuberosum TYKY1 mRNA for NADH:ubiquinone ... 48 0.017
11emb|CR700081.2|CNS0G34T Tetraodon nigroviridis full-length cDNA 42 1.0
12emb|CR670805.2|CNS0FGKB Tetraodon nigroviridis full-length cDNA 42 1.0
13gb|AF350703.1|AF350703 Notylia barkerii chloroplast tRNA-Leu (tr... 42 1.0
14gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, comple... 42 1.0
15gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome ... 40 4.1
16gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosom... 40 4.1
17gb|AC135117.3| Mus musculus BAC clone RP24-444P19 from chromosom... 40 4.1
18ref|XM_732656.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 4.1
19gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 4.1
20emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on ch... 40 4.1
21gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 4.1
22gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosom... 40 4.1
23emb|AL049980.1|HSM800327 Homo sapiens genomic DNA; cDNA DKFZp564... 40 4.1
24gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cance... 40 4.1
25dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 4.1
26gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell ... 40 4.1
27gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 4.1
28gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete... 40 4.1
29gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 fro... 40 4.1
30gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 40 4.1
31dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 4.1
32emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chr... 40 4.1
33gb|AC169805.2| Rhesus Macaque CHR14 BAC CH250-14P20 (Children's ... 40 4.1
34dbj|AB052733.1| Trichosporon cutaneum CYP55A4 mRNA for cytochrom... 40 4.1

>gb|BT018219.1| Zea mays clone EL01N0561C01.c mRNA sequence
          Length = 854

 Score =  289 bits (146), Expect = 3e-75
 Identities = 224/251 (89%)
 Strand = Plus / Plus

                                                                       
Query: 53  accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112
           ||||||||| |||||||||||||||||||||||| ||| |||||||| ||||| ||||||
Sbjct: 83  accatggcgtcgctcctagcccggcaggcagcgcaggcgctccgcgcgaggcaaacggcg 142

                                                                       
Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172
           || ||||| ||| ||||| |||||||||| || |||||||| ||||||||| ||||||||
Sbjct: 143 cagctcgggccggccgcgtcggcgatgcaagggcacctccgtacctacatgaacgcgggg 202

                                                                       
Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232
            | |||||| ||||||||||||||||||||||||||||| | |||||||| || || |||
Sbjct: 203 attcccaagcggttcaaagaggatgaggagaaagaacagcttgcaaaagatctcgcaaaa 262

                                                                       
Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292
           ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| 
Sbjct: 263 gattggaatgctgtgtttgaaaggagcatcaatacattgtttttgactgaaatggtccgc 322

                      
Query: 293 ggnctgatgct 303
           ||  |||||||
Sbjct: 323 ggcttgatgct 333



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>ref|NM_194084.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1041

 Score =  264 bits (133), Expect = 2e-67
 Identities = 226/258 (87%)
 Strand = Plus / Plus

                                                                       
Query: 53  accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112
           ||||||||||||||||| |||||||||||||||| ||| ||||||||  | |||| ||||
Sbjct: 73  accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgcgcgccagatggcg 132

                                                                       
Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172
           || ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| |||
Sbjct: 133 cagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgcaggg 192

                                                                       
Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232
             ||||| |||||||||||||||||||||||||||  || | ||||| ||  | ||||||
Sbjct: 193 aagcccacgaggttcaaagaggatgaggagaaagagaagcttgcaaaggagatagcgaaa 252

                                                                       
Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292
           |||||||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| 
Sbjct: 253 gattggaatgctgtatttgaaaggagcatcaacacattgtttttgactgaaatggtccgc 312

                             
Query: 293 ggnctgatgctgacactc 310
           ||  ||||||||||||||
Sbjct: 313 ggtttgatgctgacactc 330



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>dbj|AK119532.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F01, full
           insert sequence
          Length = 1052

 Score =  264 bits (133), Expect = 2e-67
 Identities = 226/258 (87%)
 Strand = Plus / Plus

                                                                       
Query: 53  accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112
           ||||||||||||||||| |||||||||||||||| ||| ||||||||  | |||| ||||
Sbjct: 94  accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgcgcgccagatggcg 153

                                                                       
Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172
           || ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| |||
Sbjct: 154 cagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgcaggg 213

                                                                       
Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232
             ||||| |||||||||||||||||||||||||||  || | ||||| ||  | ||||||
Sbjct: 214 aagcccacgaggttcaaagaggatgaggagaaagagaagcttgcaaaggagatagcgaaa 273

                                                                       
Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292
           |||||||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| 
Sbjct: 274 gattggaatgctgtatttgaaaggagcatcaacacattgtttttgactgaaatggtccgc 333

                             
Query: 293 ggnctgatgctgacactc 310
           ||  ||||||||||||||
Sbjct: 334 ggtttgatgctgacactc 351



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>dbj|AK065851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041L15, full
           insert sequence
          Length = 1000

 Score =  264 bits (133), Expect = 2e-67
 Identities = 226/258 (87%)
 Strand = Plus / Plus

                                                                       
Query: 53  accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112
           ||||||||||||||||| |||||||||||||||| ||| ||||||||  | |||| ||||
Sbjct: 42  accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgcgcgccagatggcg 101

                                                                       
Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172
           || ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| |||
Sbjct: 102 cagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgcaggg 161

                                                                       
Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232
             ||||| |||||||||||||||||||||||||||  || | ||||| ||  | ||||||
Sbjct: 162 aagcccacgaggttcaaagaggatgaggagaaagagaagcttgcaaaggagatagcgaaa 221

                                                                       
Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292
           |||||||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| 
Sbjct: 222 gattggaatgctgtatttgaaaggagcatcaacacattgtttttgactgaaatggtccgc 281

                             
Query: 293 ggnctgatgctgacactc 310
           ||  ||||||||||||||
Sbjct: 282 ggtttgatgctgacactc 299



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>gb|AY111683.1| Zea mays CL4677_1 mRNA sequence
          Length = 1077

 Score =  125 bits (63), Expect = 9e-26
 Identities = 111/127 (87%)
 Strand = Plus / Plus

                                                                       
Query: 55  catggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcgca 114
           |||||||||||||||||||||||||||||||| ||| |||||||| || ||| |||||||
Sbjct: 92  catggcggcgctcctagcccggcaggcagcgcaggcgctccgcgcgagacagtcggcgca 151

                                                                       
Query: 115 tctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggggt 174
            ||||| ||| |  || ||||||||||||| |||||||| ||||||||| |||||||| |
Sbjct: 152 gctcgggccgacaacgtcggcgatgcaggggcacctccgtacctacatgaacgcggggat 211

                  
Query: 175 gcccaag 181
            ||||||
Sbjct: 212 tcccaag 218



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                       
Query: 230 aaagattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnc 289
           |||||||||||||||||||| |||||||||||||||||||||     ||||||||||| |
Sbjct: 267 aaagattggaatgctgtgtttgaaaggagcatcaatacattgnnnnngactgaaatggtc 326

                         
Query: 290 cgtggnctgatgct 303
           |||||  |||||||
Sbjct: 327 cgtggcttgatgct 340



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 109      ggcgcatctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgc 168
                |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||
Sbjct: 31791351 ggcgcagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgc 31791292

                                       
Query: 169      gggggtgcccaagaggttcaaag 191
                 |||  ||||| |||||||||||
Sbjct: 31791291 agggaagcccacgaggttcaaag 31791269



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 251      gaaaggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310
                |||||||||||||| |||||||| ||||||||||||| ||| ||  ||||||||||||||
Sbjct: 31790726 gaaaggagcatcaacacattgtttttgactgaaatggtccgcggtttgatgctgacactc 31790667



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 53       accatggcggcgctcctagcccggcaggcagcgctggccctccgcgc 99
                ||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 31791603 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgc 31791557



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 255      ggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310
                |||||||||| |||||||| |||||||||||||  | |||  ||||||| ||||||
Sbjct: 32632983 ggagcatcaacacattgtttttgactgaaatggttcatggtttgatgcttacactc 32632928



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190      agaggatgaggagaaagaacagntcgcaaaagaacttgcgaaagattggaatgctg 245
                ||||||||||||||||||  || | ||||| ||  | |||||||||||||||||||
Sbjct: 31790879 agaggatgaggagaaagagaagcttgcaaaggagatagcgaaagattggaatgctg 31790824



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>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
              sequence
          Length = 134496

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                          
Query: 109    ggcgcatctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgc 168
              |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||
Sbjct: 116577 ggcgcagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgc 116518

                                     
Query: 169    gggggtgcccaagaggttcaaag 191
               |||  ||||| |||||||||||
Sbjct: 116517 agggaagcccacgaggttcaaag 116495



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 251    gaaaggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310
              |||||||||||||| |||||||| ||||||||||||| ||| ||  ||||||||||||||
Sbjct: 115952 gaaaggagcatcaacacattgtttttgactgaaatggtccgcggtttgatgctgacactc 115893



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 53     accatggcggcgctcctagcccggcaggcagcgctggccctccgcgc 99
              ||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 116829 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgc 116783



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 190    agaggatgaggagaaagaacagntcgcaaaagaacttgcgaaagattggaatgctg 245
              ||||||||||||||||||  || | ||||| ||  | |||||||||||||||||||
Sbjct: 116105 agaggatgaggagaaagagaagcttgcaaaggagatagcgaaagattggaatgctg 116050



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                            
Query: 109      ggcgcatctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgc 168
                |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| |||
Sbjct: 31881867 ggcgcagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgc 31881808

                                       
Query: 169      gggggtgcccaagaggttcaaag 191
                 |||  ||||| |||||||||||
Sbjct: 31881807 agggaagcccacgaggttcaaag 31881785



 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 251      gaaaggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310
                |||||||||||||| |||||||| ||||||||||||| ||| ||  ||||||||||||||
Sbjct: 31881242 gaaaggagcatcaacacattgtttttgactgaaatggtccgcggtttgatgctgacactc 31881183



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                               
Query: 53       accatggcggcgctcctagcccggcaggcagcgctggccctccgcgc 99
                ||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 31882119 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgc 31882073



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 255      ggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310
                |||||||||| |||||||| |||||||||||||  | |||  ||||||| ||||||
Sbjct: 32723493 ggagcatcaacacattgtttttgactgaaatggttcatggtttgatgcttacactc 32723438



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 190      agaggatgaggagaaagaacagntcgcaaaagaacttgcgaaagattggaatgctg 245
                ||||||||||||||||||  || | ||||| ||  | |||||||||||||||||||
Sbjct: 31881395 agaggatgaggagaaagagaagcttgcaaaggagatagcgaaagattggaatgctg 31881340



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>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete
              sequence
          Length = 162497

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                      
Query: 255    ggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310
              |||||||||| |||||||| |||||||||||||  | |||  ||||||| ||||||
Sbjct: 110924 ggagcatcaacacattgtttttgactgaaatggttcatggtttgatgcttacactc 110979



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>emb|X84319.1|STTYKY1 S.tuberosum TYKY1 mRNA for NADH:ubiquinone oxidoreductase
          Length = 876

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 257 agcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgac 306
           |||||||||||||| || |||||||||||||  || || || ||||||||
Sbjct: 233 agcatcaatacattatttttgactgaaatggttcgaggtctaatgctgac 282



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>emb|CR700081.2|CNS0G34T Tetraodon nigroviridis full-length cDNA
          Length = 1596

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 ggttcaaagaggatgaggaga 203
           |||||||||||||||||||||
Sbjct: 292 ggttcaaagaggatgaggaga 312



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>emb|CR670805.2|CNS0FGKB Tetraodon nigroviridis full-length cDNA
          Length = 1866

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 ggttcaaagaggatgaggaga 203
           |||||||||||||||||||||
Sbjct: 830 ggttcaaagaggatgaggaga 850



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>gb|AF350703.1|AF350703 Notylia barkerii chloroplast tRNA-Leu (trnL) gene and trnL-trnF
           intergenic spacer, partial sequence
          Length = 1218

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 188 aaagaggatgaggagaaagaa 208
           |||||||||||||||||||||
Sbjct: 843 aaagaggatgaggagaaagaa 823



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>gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, complete sequence
          Length = 185363

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   agaggatgaggagaaagaaca 210
             |||||||||||||||||||||
Sbjct: 18409 agaggatgaggagaaagaaca 18429



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>gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome 6, complete sequence
          Length = 243690

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gaggatgaggagaaagaaca 210
             ||||||||||||||||||||
Sbjct: 30042 gaggatgaggagaaagaaca 30023



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>gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosome 6, complete sequence
          Length = 222024

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gaggatgaggagaaagaaca 210
              ||||||||||||||||||||
Sbjct: 181891 gaggatgaggagaaagaaca 181872



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>gb|AC135117.3| Mus musculus BAC clone RP24-444P19 from chromosome 6, complete sequence
          Length = 166651

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gaggatgaggagaaagaaca 210
             ||||||||||||||||||||
Sbjct: 81911 gaggatgaggagaaagaaca 81892



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>ref|XM_732656.1| Plasmodium chabaudi chabaudi hypothetical protein (PC402676.00.0)
           partial mRNA
          Length = 1028

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 aagaggatgaggagaaagaa 208
           ||||||||||||||||||||
Sbjct: 958 aagaggatgaggagaaagaa 977



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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     cgacgacgcgaccatggcggcgct 66
              |||||||| |||||||||||||||
Sbjct: 496510 cgacgacgagaccatggcggcgct 496487



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>emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on chromosome 13 Contains the
             3' end of a novel gene, complete sequence
          Length = 168068

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaagaggatgaggagaaaga 207
             ||||||||||||||||||||
Sbjct: 33484 aaagaggatgaggagaaaga 33503



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaagaggatgaggagaaaga 207
             ||||||||||||||||||||
Sbjct: 33469 aaagaggatgaggagaaaga 33488



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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 41      gccgacgacgcgaccatggcggcg 64
               |||||||||||||||| |||||||
Sbjct: 3140137 gccgacgacgcgaccaaggcggcg 3140114



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>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence
          Length = 162840

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    aagaggatgaggagaaagaa 208
              ||||||||||||||||||||
Sbjct: 147914 aagaggatgaggagaaagaa 147933



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>emb|AL049980.1|HSM800327 Homo sapiens genomic DNA; cDNA DKFZp564C152 (from clone
           DKFZp564C152)
          Length = 2067

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 219 aagaacttgcgaaagattggaatg 242
           ||||| ||||||||||||||||||
Sbjct: 273 aagaatttgcgaaagattggaatg 296



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>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161699

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaagaggatgaggagaaaga 207
             ||||||||||||||||||||
Sbjct: 17589 aaagaggatgaggagaaaga 17608



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aaagaggatgaggagaaaga 207
             ||||||||||||||||||||
Sbjct: 17574 aaagaggatgaggagaaaga 17593



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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    tcaaagaggatgaggagaaa 205
              ||||||||||||||||||||
Sbjct: 512823 tcaaagaggatgaggagaaa 512804



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>gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153081

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   gaggatgaggagaaagaaca 210
             ||||||||||||||||||||
Sbjct: 40304 gaggatgaggagaaagaaca 40323



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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 33      tcctcgtcgccgacgacgcgacca 56
               |||||||||||||||| |||||||
Sbjct: 2864986 tcctcgtcgccgacgaagcgacca 2865009



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>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence
          Length = 78121

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 236   tggaatgctgtgttcgaaaggagc 259
             |||||||||||||| |||||||||
Sbjct: 55721 tggaatgctgtgtttgaaaggagc 55698



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>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome
            unknown, complete sequence
          Length = 161382

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 189  aagaggatgaggagaaagaa 208
            ||||||||||||||||||||
Sbjct: 8640 aagaggatgaggagaaagaa 8659



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>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   aagaggatgaggagaaagaa 208
             ||||||||||||||||||||
Sbjct: 76547 aagaggatgaggagaaagaa 76528



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>dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-708B6, complete
             sequence
          Length = 189955

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   aagaggatgaggagaaagaa 208
             ||||||||||||||||||||
Sbjct: 11932 aagaggatgaggagaaagaa 11913



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>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete
             sequence
          Length = 251037

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aagaggatgaggagaaagaa 208
             ||||||||||||||||||||
Sbjct: 45329 aagaggatgaggagaaagaa 45348



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>gb|AC169805.2| Rhesus Macaque CHR14 BAC CH250-14P20 (Children's Hospital Oakland
             Research Institute Rhesus macaque Adult Male BAC Library)
             complete sequence
          Length = 204789

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   caaagaggatgaggagaaag 206
             ||||||||||||||||||||
Sbjct: 12814 caaagaggatgaggagaaag 12833



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>dbj|AB052733.1| Trichosporon cutaneum CYP55A4 mRNA for cytochrome P450nor, complete
           cds
          Length = 1360

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 32  ctcctcgtcgccgacgacgcgaccatgg 59
           ||||||||||||| | ||||||||||||
Sbjct: 757 ctcctcgtcgccggcaacgcgaccatgg 784


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,927,503
Number of Sequences: 3902068
Number of extensions: 1927503
Number of successful extensions: 44358
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44056
Number of HSP's gapped (non-prelim): 296
length of query: 310
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 288
effective length of database: 17,147,199,772
effective search space: 4938393534336
effective search space used: 4938393534336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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