| Clone Name | bags29p19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018219.1| Zea mays clone EL01N0561C01.c mRNA sequence Length = 854 Score = 289 bits (146), Expect = 3e-75 Identities = 224/251 (89%) Strand = Plus / Plus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112 ||||||||| |||||||||||||||||||||||| ||| |||||||| ||||| |||||| Sbjct: 83 accatggcgtcgctcctagcccggcaggcagcgcaggcgctccgcgcgaggcaaacggcg 142 Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172 || ||||| ||| ||||| |||||||||| || |||||||| ||||||||| |||||||| Sbjct: 143 cagctcgggccggccgcgtcggcgatgcaagggcacctccgtacctacatgaacgcgggg 202 Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232 | |||||| ||||||||||||||||||||||||||||| | |||||||| || || ||| Sbjct: 203 attcccaagcggttcaaagaggatgaggagaaagaacagcttgcaaaagatctcgcaaaa 262 Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292 ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 263 gattggaatgctgtgtttgaaaggagcatcaatacattgtttttgactgaaatggtccgc 322 Query: 293 ggnctgatgct 303 || ||||||| Sbjct: 323 ggcttgatgct 333
>ref|NM_194084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 264 bits (133), Expect = 2e-67 Identities = 226/258 (87%) Strand = Plus / Plus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112 ||||||||||||||||| |||||||||||||||| ||| |||||||| | |||| |||| Sbjct: 73 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgcgcgccagatggcg 132 Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172 || ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| Sbjct: 133 cagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgcaggg 192 Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232 ||||| ||||||||||||||||||||||||||| || | ||||| || | |||||| Sbjct: 193 aagcccacgaggttcaaagaggatgaggagaaagagaagcttgcaaaggagatagcgaaa 252 Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292 |||||||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| Sbjct: 253 gattggaatgctgtatttgaaaggagcatcaacacattgtttttgactgaaatggtccgc 312 Query: 293 ggnctgatgctgacactc 310 || |||||||||||||| Sbjct: 313 ggtttgatgctgacactc 330
>dbj|AK119532.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F01, full insert sequence Length = 1052 Score = 264 bits (133), Expect = 2e-67 Identities = 226/258 (87%) Strand = Plus / Plus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112 ||||||||||||||||| |||||||||||||||| ||| |||||||| | |||| |||| Sbjct: 94 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgcgcgccagatggcg 153 Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172 || ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| Sbjct: 154 cagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgcaggg 213 Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232 ||||| ||||||||||||||||||||||||||| || | ||||| || | |||||| Sbjct: 214 aagcccacgaggttcaaagaggatgaggagaaagagaagcttgcaaaggagatagcgaaa 273 Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292 |||||||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| Sbjct: 274 gattggaatgctgtatttgaaaggagcatcaacacattgtttttgactgaaatggtccgc 333 Query: 293 ggnctgatgctgacactc 310 || |||||||||||||| Sbjct: 334 ggtttgatgctgacactc 351
>dbj|AK065851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041L15, full insert sequence Length = 1000 Score = 264 bits (133), Expect = 2e-67 Identities = 226/258 (87%) Strand = Plus / Plus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcg 112 ||||||||||||||||| |||||||||||||||| ||| |||||||| | |||| |||| Sbjct: 42 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgcgcgccagatggcg 101 Query: 113 catctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggg 172 || ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| ||| Sbjct: 102 cagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgcaggg 161 Query: 173 gtgcccaagaggttcaaagaggatgaggagaaagaacagntcgcaaaagaacttgcgaaa 232 ||||| ||||||||||||||||||||||||||| || | ||||| || | |||||| Sbjct: 162 aagcccacgaggttcaaagaggatgaggagaaagagaagcttgcaaaggagatagcgaaa 221 Query: 233 gattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnccgt 292 |||||||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| Sbjct: 222 gattggaatgctgtatttgaaaggagcatcaacacattgtttttgactgaaatggtccgc 281 Query: 293 ggnctgatgctgacactc 310 || |||||||||||||| Sbjct: 282 ggtttgatgctgacactc 299
>gb|AY111683.1| Zea mays CL4677_1 mRNA sequence Length = 1077 Score = 125 bits (63), Expect = 9e-26 Identities = 111/127 (87%) Strand = Plus / Plus Query: 55 catggcggcgctcctagcccggcaggcagcgctggccctccgcgccaggcagacggcgca 114 |||||||||||||||||||||||||||||||| ||| |||||||| || ||| ||||||| Sbjct: 92 catggcggcgctcctagcccggcaggcagcgcaggcgctccgcgcgagacagtcggcgca 151 Query: 115 tctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgcgggggt 174 ||||| ||| | || ||||||||||||| |||||||| ||||||||| |||||||| | Sbjct: 152 gctcgggccgacaacgtcggcgatgcaggggcacctccgtacctacatgaacgcggggat 211 Query: 175 gcccaag 181 |||||| Sbjct: 212 tcccaag 218 Score = 89.7 bits (45), Expect = 5e-15 Identities = 65/74 (87%) Strand = Plus / Plus Query: 230 aaagattggaatgctgtgttcgaaaggagcatcaatacattgttcttgactgaaatggnc 289 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | Sbjct: 267 aaagattggaatgctgtgtttgaaaggagcatcaatacattgnnnnngactgaaatggtc 326 Query: 290 cgtggnctgatgct 303 ||||| ||||||| Sbjct: 327 cgtggcttgatgct 340
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 3e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 109 ggcgcatctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgc 168 |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| Sbjct: 31791351 ggcgcagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgc 31791292 Query: 169 gggggtgcccaagaggttcaaag 191 ||| ||||| ||||||||||| Sbjct: 31791291 agggaagcccacgaggttcaaag 31791269 Score = 75.8 bits (38), Expect = 7e-11 Identities = 54/60 (90%) Strand = Plus / Minus Query: 251 gaaaggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310 |||||||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| Sbjct: 31790726 gaaaggagcatcaacacattgtttttgactgaaatggtccgcggtttgatgctgacactc 31790667 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgc 99 ||||||||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 31791603 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgc 31791557 Score = 52.0 bits (26), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 255 ggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310 |||||||||| |||||||| ||||||||||||| | ||| ||||||| |||||| Sbjct: 32632983 ggagcatcaacacattgtttttgactgaaatggttcatggtttgatgcttacactc 32632928 Score = 50.1 bits (25), Expect = 0.004 Identities = 48/56 (85%) Strand = Plus / Minus Query: 190 agaggatgaggagaaagaacagntcgcaaaagaacttgcgaaagattggaatgctg 245 |||||||||||||||||| || | ||||| || | ||||||||||||||||||| Sbjct: 31790879 agaggatgaggagaaagagaagcttgcaaaggagatagcgaaagattggaatgctg 31790824
>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete sequence Length = 134496 Score = 93.7 bits (47), Expect = 3e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 109 ggcgcatctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgc 168 |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| Sbjct: 116577 ggcgcagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgc 116518 Query: 169 gggggtgcccaagaggttcaaag 191 ||| ||||| ||||||||||| Sbjct: 116517 agggaagcccacgaggttcaaag 116495 Score = 75.8 bits (38), Expect = 7e-11 Identities = 54/60 (90%) Strand = Plus / Minus Query: 251 gaaaggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310 |||||||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| Sbjct: 115952 gaaaggagcatcaacacattgtttttgactgaaatggtccgcggtttgatgctgacactc 115893 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgc 99 ||||||||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 116829 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgc 116783 Score = 50.1 bits (25), Expect = 0.004 Identities = 48/56 (85%) Strand = Plus / Minus Query: 190 agaggatgaggagaaagaacagntcgcaaaagaacttgcgaaagattggaatgctg 245 |||||||||||||||||| || | ||||| || | ||||||||||||||||||| Sbjct: 116105 agaggatgaggagaaagagaagcttgcaaaggagatagcgaaagattggaatgctg 116050
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 3e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 109 ggcgcatctcggcccgtccgcgacggcgatgcagggccacctccggacctacatggacgc 168 |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||| Sbjct: 31881867 ggcgcagctcgggccgtccgcgacggcgatgcaggggcacatccggacctacatgggcgc 31881808 Query: 169 gggggtgcccaagaggttcaaag 191 ||| ||||| ||||||||||| Sbjct: 31881807 agggaagcccacgaggttcaaag 31881785 Score = 75.8 bits (38), Expect = 7e-11 Identities = 54/60 (90%) Strand = Plus / Minus Query: 251 gaaaggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310 |||||||||||||| |||||||| ||||||||||||| ||| || |||||||||||||| Sbjct: 31881242 gaaaggagcatcaacacattgtttttgactgaaatggtccgcggtttgatgctgacactc 31881183 Score = 69.9 bits (35), Expect = 5e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 53 accatggcggcgctcctagcccggcaggcagcgctggccctccgcgc 99 ||||||||||||||||| |||||||||||||||| ||| |||||||| Sbjct: 31882119 accatggcggcgctcctcgcccggcaggcagcgcaggcgctccgcgc 31882073 Score = 52.0 bits (26), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Minus Query: 255 ggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310 |||||||||| |||||||| ||||||||||||| | ||| ||||||| |||||| Sbjct: 32723493 ggagcatcaacacattgtttttgactgaaatggttcatggtttgatgcttacactc 32723438 Score = 50.1 bits (25), Expect = 0.004 Identities = 48/56 (85%) Strand = Plus / Minus Query: 190 agaggatgaggagaaagaacagntcgcaaaagaacttgcgaaagattggaatgctg 245 |||||||||||||||||| || | ||||| || | ||||||||||||||||||| Sbjct: 31881395 agaggatgaggagaaagagaagcttgcaaaggagatagcgaaagattggaatgctg 31881340
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 52.0 bits (26), Expect = 0.001 Identities = 48/56 (85%) Strand = Plus / Plus Query: 255 ggagcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgacactc 310 |||||||||| |||||||| ||||||||||||| | ||| ||||||| |||||| Sbjct: 110924 ggagcatcaacacattgtttttgactgaaatggttcatggtttgatgcttacactc 110979
>emb|X84319.1|STTYKY1 S.tuberosum TYKY1 mRNA for NADH:ubiquinone oxidoreductase Length = 876 Score = 48.1 bits (24), Expect = 0.017 Identities = 43/50 (86%) Strand = Plus / Plus Query: 257 agcatcaatacattgttcttgactgaaatggnccgtggnctgatgctgac 306 |||||||||||||| || ||||||||||||| || || || |||||||| Sbjct: 233 agcatcaatacattatttttgactgaaatggttcgaggtctaatgctgac 282
>emb|CR700081.2|CNS0G34T Tetraodon nigroviridis full-length cDNA Length = 1596 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ggttcaaagaggatgaggaga 203 ||||||||||||||||||||| Sbjct: 292 ggttcaaagaggatgaggaga 312
>emb|CR670805.2|CNS0FGKB Tetraodon nigroviridis full-length cDNA Length = 1866 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ggttcaaagaggatgaggaga 203 ||||||||||||||||||||| Sbjct: 830 ggttcaaagaggatgaggaga 850
>gb|AF350703.1|AF350703 Notylia barkerii chloroplast tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence Length = 1218 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 aaagaggatgaggagaaagaa 208 ||||||||||||||||||||| Sbjct: 843 aaagaggatgaggagaaagaa 823
>gb|AC123827.4| Mus musculus BAC clone RP24-100N12 from 5, complete sequence Length = 185363 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 agaggatgaggagaaagaaca 210 ||||||||||||||||||||| Sbjct: 18409 agaggatgaggagaaagaaca 18429
>gb|AC163675.4| Mus musculus BAC clone RP23-9G21 from chromosome 6, complete sequence Length = 243690 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gaggatgaggagaaagaaca 210 |||||||||||||||||||| Sbjct: 30042 gaggatgaggagaaagaaca 30023
>gb|AC159310.3| Mus musculus BAC clone RP23-158N20 from chromosome 6, complete sequence Length = 222024 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gaggatgaggagaaagaaca 210 |||||||||||||||||||| Sbjct: 181891 gaggatgaggagaaagaaca 181872
>gb|AC135117.3| Mus musculus BAC clone RP24-444P19 from chromosome 6, complete sequence Length = 166651 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gaggatgaggagaaagaaca 210 |||||||||||||||||||| Sbjct: 81911 gaggatgaggagaaagaaca 81892
>ref|XM_732656.1| Plasmodium chabaudi chabaudi hypothetical protein (PC402676.00.0) partial mRNA Length = 1028 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aagaggatgaggagaaagaa 208 |||||||||||||||||||| Sbjct: 958 aagaggatgaggagaaagaa 977
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 cgacgacgcgaccatggcggcgct 66 |||||||| ||||||||||||||| Sbjct: 496510 cgacgacgagaccatggcggcgct 496487
>emb|AL445668.10| Human DNA sequence from clone RP11-234O23 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 168068 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 aaagaggatgaggagaaaga 207 |||||||||||||||||||| Sbjct: 33484 aaagaggatgaggagaaaga 33503 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 aaagaggatgaggagaaaga 207 |||||||||||||||||||| Sbjct: 33469 aaagaggatgaggagaaaga 33488
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgacgacgcgaccatggcggcg 64 |||||||||||||||| ||||||| Sbjct: 3140137 gccgacgacgcgaccaaggcggcg 3140114
>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence Length = 162840 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aagaggatgaggagaaagaa 208 |||||||||||||||||||| Sbjct: 147914 aagaggatgaggagaaagaa 147933
>emb|AL049980.1|HSM800327 Homo sapiens genomic DNA; cDNA DKFZp564C152 (from clone DKFZp564C152) Length = 2067 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 aagaacttgcgaaagattggaatg 242 ||||| |||||||||||||||||| Sbjct: 273 aagaatttgcgaaagattggaatg 296
>gb|AC107300.6| Homo sapiens 3 BAC RP11-516H5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161699 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 aaagaggatgaggagaaaga 207 |||||||||||||||||||| Sbjct: 17589 aaagaggatgaggagaaaga 17608 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 aaagaggatgaggagaaaga 207 |||||||||||||||||||| Sbjct: 17574 aaagaggatgaggagaaaga 17593
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tcaaagaggatgaggagaaa 205 |||||||||||||||||||| Sbjct: 512823 tcaaagaggatgaggagaaa 512804
>gb|AC009774.18|AC009774 Homo sapiens 12 BAC RP11-524K8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153081 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gaggatgaggagaaagaaca 210 |||||||||||||||||||| Sbjct: 40304 gaggatgaggagaaagaaca 40323
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 tcctcgtcgccgacgacgcgacca 56 |||||||||||||||| ||||||| Sbjct: 2864986 tcctcgtcgccgacgaagcgacca 2865009
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence Length = 78121 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tggaatgctgtgttcgaaaggagc 259 |||||||||||||| ||||||||| Sbjct: 55721 tggaatgctgtgtttgaaaggagc 55698
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aagaggatgaggagaaagaa 208 |||||||||||||||||||| Sbjct: 8640 aagaggatgaggagaaagaa 8659
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aagaggatgaggagaaagaa 208 |||||||||||||||||||| Sbjct: 76547 aagaggatgaggagaaagaa 76528
>dbj|AP000775.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-708B6, complete sequence Length = 189955 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 aagaggatgaggagaaagaa 208 |||||||||||||||||||| Sbjct: 11932 aagaggatgaggagaaagaa 11913
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 aagaggatgaggagaaagaa 208 |||||||||||||||||||| Sbjct: 45329 aagaggatgaggagaaagaa 45348
>gb|AC169805.2| Rhesus Macaque CHR14 BAC CH250-14P20 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 204789 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 caaagaggatgaggagaaag 206 |||||||||||||||||||| Sbjct: 12814 caaagaggatgaggagaaag 12833
>dbj|AB052733.1| Trichosporon cutaneum CYP55A4 mRNA for cytochrome P450nor, complete cds Length = 1360 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 32 ctcctcgtcgccgacgacgcgaccatgg 59 ||||||||||||| | |||||||||||| Sbjct: 757 ctcctcgtcgccggcaacgcgaccatgg 784 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,927,503 Number of Sequences: 3902068 Number of extensions: 1927503 Number of successful extensions: 44358 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 44056 Number of HSP's gapped (non-prelim): 296 length of query: 310 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 288 effective length of database: 17,147,199,772 effective search space: 4938393534336 effective search space used: 4938393534336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)