ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29p14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464026.1| Oryza sativa (japonica cultivar-group), mRNA 100 2e-18
2dbj|AK060180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 2e-18
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 74 1e-10
4dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic D... 74 1e-10
5gb|BT013561.1| Lycopersicon esculentum clone 132298F, mRNA sequence 66 2e-08
6gb|BT009113.1| Triticum aestivum clone wl1.pk0012.b6:fis, full i... 64 1e-07
7ref|NM_127375.1| Arabidopsis thaliana transporter AT2G18180 mRNA... 50 0.001
8gb|BT018660.1| Zea mays clone EL01N0509A01.d mRNA sequence 44 0.091
9emb|Z77659.1|CEF23B12 Caenorhabditis elegans Cosmid F23B12, comp... 44 0.091
10gb|BT009128.1| Triticum aestivum clone wl1n.pk0024.g3:fis, full ... 44 0.091
11gb|AC007212.7| Arabidopsis thaliana chromosome 2 clone F8D23 map... 44 0.091
12gb|AY108714.1| Zea mays PCO089133 mRNA sequence 44 0.091
13dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.36
14dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.36
15ref|XM_639124.1| Dictyostelium discoideum putative STE20 family ... 40 1.4
16gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, compl... 40 1.4
17gb|AC097639.2| Homo sapiens chromosome 3 clone RP11-384L8, compl... 40 1.4
18gb|AF367434.1|AF367434 Lotus japonicus phosphatidylinositol tran... 40 1.4
19gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067... 40 1.4
20gb|AY106985.1| Zea mays PCO123808 mRNA sequence 40 1.4
21dbj|AP006643.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 1.4
22ref|NM_106191.3| Arabidopsis thaliana transporter AT1G75370 mRNA... 38 5.6
23gb|BT012454.1| Drosophila melanogaster RE64461 full insert cDNA 38 5.6
24gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete se... 38 5.6
25emb|AL158047.9| Human DNA sequence from clone RP11-388B24 on chr... 38 5.6
26emb|AL731791.16| Mouse DNA sequence from clone RP23-199A12 on ch... 38 5.6
27emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chr... 38 5.6
28ref|NM_136372.2| Drosophila melanogaster Brahma associated prote... 38 5.6
29gb|AC005045.2| Homo sapiens BAC clone CTB-12D21 from 7q11.2-q22,... 38 5.6
30gb|AF091119.1|AF091119 Lactococcus lactis DNA mismatch repair pr... 38 5.6
31emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chro... 38 5.6
32gb|AC007593.5|AC007593 Drosophila melanogaster, chromosome 2R, r... 38 5.6
33emb|BX815255.1|CNS0AAT4 Arabidopsis thaliana Full-length cDNA Co... 38 5.6
34gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B... 38 5.6
35emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chr... 38 5.6
36dbj|AK118304.1| Arabidopsis thaliana At1g75370 mRNA for putative... 38 5.6
37gb|AY103910.1| Zea mays PCO104496 mRNA sequence 38 5.6
38gb|AF145672.1|AF145672 Drosophila melanogaster clone GH12174 BcD... 38 5.6
39gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 ... 38 5.6 
>ref|XM_464026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1875

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 30  ctgcttgaaataattgatgctagtgaatngccagaatttcttggtggcaattgtacctgt 89
           ||||| ||| |||||||||||||||||| ||| ||||| |||||||||  ||||||||||
Sbjct: 907 ctgctagaagtaattgatgctagtgaattgccggaattccttggtggcgcttgtacctgt 966

                                           
Query: 90  cccnaatatggagggtgcctcaaagctgaaaa 121
           ||  ||||||||||||| || |||||||||||
Sbjct: 967 cctgaatatggagggtgtcttaaagctgaaaa 998
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>dbj|AK060180.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-B05, full
           insert sequence
          Length = 1467

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 30  ctgcttgaaataattgatgctagtgaatngccagaatttcttggtggcaattgtacctgt 89
           ||||| ||| |||||||||||||||||| ||| ||||| |||||||||  ||||||||||
Sbjct: 302 ctgctagaagtaattgatgctagtgaattgccggaattccttggtggcgcttgtacctgt 361

                                           
Query: 90  cccnaatatggagggtgcctcaaagctgaaaa 121
           ||  ||||||||||||| || |||||||||||
Sbjct: 362 cctgaatatggagggtgtcttaaagctgaaaa 393
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                           
Query: 51      agtgaatngccagaatttcttggtggcaattgtacctgtcccnaatatggagggtgcctc 110
               ||||||| ||| ||||| |||||||||  ||||||||||||  ||||||||||||| || 
Sbjct: 1746345 agtgaattgccggaattccttggtggcgcttgtacctgtcctgaatatggagggtgtctt 1746404

                          
Query: 111     aaagctgaaaa 121
               |||||||||||
Sbjct: 1746405 aaagctgaaaa 1746415
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>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G11
          Length = 143943

 Score = 73.8 bits (37), Expect = 1e-10
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 51    agtgaatngccagaatttcttggtggcaattgtacctgtcccnaatatggagggtgcctc 110
             ||||||| ||| ||||| |||||||||  ||||||||||||  ||||||||||||| || 
Sbjct: 64357 agtgaattgccggaattccttggtggcgcttgtacctgtcctgaatatggagggtgtctt 64416

                        
Query: 111   aaagctgaaaa 121
             |||||||||||
Sbjct: 64417 aaagctgaaaa 64427
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>gb|BT013561.1| Lycopersicon esculentum clone 132298F, mRNA sequence
          Length = 2133

 Score = 65.9 bits (33), Expect = 2e-08
 Identities = 54/60 (90%), Gaps = 1/60 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   cttgggaacaagtgtcagtagtaaactgcttgaaataattgatgctagtgaatngccaga 64
           ||||||||||||| |||| | |||| ||||||||||||||||||||||||| | ||||||
Sbjct: 930 cttgggaacaagtatcagaa-taaattgcttgaaataattgatgctagtgagttgccaga 988
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>gb|BT009113.1| Triticum aestivum clone wl1.pk0012.b6:fis, full insert mRNA
           sequence
          Length = 1325

 Score = 63.9 bits (32), Expect = 1e-07
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 33  cttgaaataattgatgctagtgaatngccagaatttcttggtggcaa 79
           ||||||||||||||||  ||||||| |||||||||| ||||||||||
Sbjct: 66  cttgaaataattgatgagagtgaattgccagaattttttggtggcaa 112
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>ref|NM_127375.1| Arabidopsis thaliana transporter AT2G18180 mRNA, complete cds
          Length = 1677

 Score = 50.1 bits (25), Expect = 0.001
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 31  tgcttgaaataattgatgctagtga 55
           |||||||||||||||||||||||||
Sbjct: 827 tgcttgaaataattgatgctagtga 851
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>gb|BT018660.1| Zea mays clone EL01N0509A01.d mRNA sequence
          Length = 1796

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 31  tgcttgaaataattgatgctagtgaatngccagaatttcttggtggcaa 79
           |||| ||||||||||| |   |||||  |||||||||||||||||||||
Sbjct: 592 tgctcgaaataattgacgagtgtgaactgccagaatttcttggtggcaa 640
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>emb|Z77659.1|CEF23B12 Caenorhabditis elegans Cosmid F23B12, complete sequence
          Length = 27797

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 10  gaacaagtgtcagtagtaaact 31
           ||||||||||||||||||||||
Sbjct: 250 gaacaagtgtcagtagtaaact 229
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>gb|BT009128.1| Triticum aestivum clone wl1n.pk0024.g3:fis, full insert mRNA
           sequence
          Length = 1341

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 31  tgcttgaaataattgatgctagtgaatngccagaatttcttggtggcaa 79
           |||| ||||||||||| |   |||||  |||||||||||||||||||||
Sbjct: 93  tgctcgaaataattgacgagtgtgaactgccagaatttcttggtggcaa 141
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>gb|AC007212.7| Arabidopsis thaliana chromosome 2 clone F8D23 map PhyB, complete
             sequence
          Length = 57550

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 31    tgcttgaaataattgatgctag 52
             ||||||||||||||||||||||
Sbjct: 15664 tgcttgaaataattgatgctag 15685
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>gb|AY108714.1| Zea mays PCO089133 mRNA sequence
          Length = 2292

 Score = 44.1 bits (22), Expect = 0.091
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 31   tgcttgaaataattgatgctagtgaatngccagaatttcttggtggcaa 79
            |||| ||||||||||| |   |||||  |||||||||||||||||||||
Sbjct: 981  tgctcgaaataattgacgagtgtgaactgccagaatttcttggtggcaa 1029
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>dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F02, full
           insert sequence
          Length = 1673

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 33  cttgaaataattgatgctagtgaatngccagaatttcttggtgg 76
           ||||||||||||||||  | ||||| |||||| ||| |||||||
Sbjct: 372 cttgaaataattgatgagaatgaattgccagagttttttggtgg 415
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>dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052B04, full
            insert sequence
          Length = 2363

 Score = 42.1 bits (21), Expect = 0.36
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 33   cttgaaataattgatgctagtgaatngccagaatttcttggtgg 76
            ||||||||||||||||  | ||||| |||||| ||| |||||||
Sbjct: 1063 cttgaaataattgatgagaatgaattgccagagttttttggtgg 1106
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>ref|XM_639124.1| Dictyostelium discoideum putative STE20 family protein kinase
           (DDB0229410), partial mRNA
          Length = 3531

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  aactgcttgaaataattgat 47
           ||||||||||||||||||||
Sbjct: 424 aactgcttgaaataattgat 405
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>gb|AC094019.2| Homo sapiens chromosome 3 clone RP11-345J6, complete sequence
          Length = 198146

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     cttgaaataattgatgctag 52
              ||||||||||||||||||||
Sbjct: 169171 cttgaaataattgatgctag 169190
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>gb|AC097639.2| Homo sapiens chromosome 3 clone RP11-384L8, complete sequence
          Length = 177384

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    cttgaaataattgatgctag 52
             ||||||||||||||||||||
Sbjct: 33409 cttgaaataattgatgctag 33428
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>gb|AF367434.1|AF367434 Lotus japonicus phosphatidylinositol transfer-like protein IV
            (LjPLP-IV) gene, complete cds
          Length = 4920

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 26   taaactgcttgaaataattgatgc 49
            |||| |||||||||||||||||||
Sbjct: 1799 taaattgcttgaaataattgatgc 1822
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>gb|AC116957.2| Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4,
            complete sequence
          Length = 405682

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   aactgcttgaaataattgat 47
            ||||||||||||||||||||
Sbjct: 6641 aactgcttgaaataattgat 6622
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>gb|AY106985.1| Zea mays PCO123808 mRNA sequence
          Length = 1198

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                               
Query: 42   attgatgctagtgaatngccagaatttcttggtgg 76
            |||||||||||||| | ||||||| || |||||||
Sbjct: 1089 attgatgctagtgagttgccagaaatttttggtgg 1123
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>dbj|AP006643.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT34A19, TM0249,
             complete sequence
          Length = 111706

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    taaactgcttgaaataattgatgc 49
             |||| |||||||||||||||||||
Sbjct: 50816 taaattgcttgaaataattgatgc 50793
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>ref|NM_106191.3| Arabidopsis thaliana transporter AT1G75370 mRNA, complete cds
          Length = 2152

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 59   gccagaatttcttggtggcaattgtacctgt 89
            |||||| ||||||||||||| ||| ||||||
Sbjct: 1051 gccagattttcttggtggcacttgcacctgt 1081
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>gb|BT012454.1| Drosophila melanogaster RE64461 full insert cDNA
          Length = 5326

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 70   ttggtggcaattgtacctg 88
            |||||||||||||||||||
Sbjct: 2137 ttggtggcaattgtacctg 2119
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>gb|AC125480.33| Medicago truncatula clone mth2-8c24, complete sequence
          Length = 119718

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    tgcttgaaataattgatgc 49
             |||||||||||||||||||
Sbjct: 86022 tgcttgaaataattgatgc 86004
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>emb|AL158047.9| Human DNA sequence from clone RP11-388B24 on chromosome 9 Contains a
             novel pseudogene, a novel gene, a DEAD/H
             (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase)
             (HRH-J8) (DDX10) pseudogene and a ribosomal protein S2
             (LLREP3) (RPS2) pseudogene, complete sequence
          Length = 201629

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    gccagaatttcttggtggc 77
             |||||||||||||||||||
Sbjct: 54861 gccagaatttcttggtggc 54879
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>emb|AL731791.16| Mouse DNA sequence from clone RP23-199A12 on chromosome X, complete
              sequence
          Length = 134389

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gaacaagtgtcagtagtaa 28
              |||||||||||||||||||
Sbjct: 122998 gaacaagtgtcagtagtaa 122980
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>emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chromosome X, complete
              sequence
          Length = 195259

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gaacaagtgtcagtagtaa 28
              |||||||||||||||||||
Sbjct: 110525 gaacaagtgtcagtagtaa 110507



 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gaacaagtgtcagtagtaa 28
              |||||||||||||||||||
Sbjct: 105696 gaacaagtgtcagtagtaa 105678
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>ref|NM_136372.2| Drosophila melanogaster Brahma associated protein 170kD CG3274-RA
            (Bap170), mRNA
          Length = 5313

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 70   ttggtggcaattgtacctg 88
            |||||||||||||||||||
Sbjct: 2137 ttggtggcaattgtacctg 2119
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>gb|AC005045.2| Homo sapiens BAC clone CTB-12D21 from 7q11.2-q22, complete sequence
          Length = 123947

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    gtaaactgcttgaaataat 43
             |||||||||||||||||||
Sbjct: 77545 gtaaactgcttgaaataat 77527
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>gb|AF091119.1|AF091119 Lactococcus lactis DNA mismatch repair protein HexA (hexA) gene,
           complete cds; and HexB (hexB) gene, partial cds
          Length = 5002

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 64  aatttcttggtggcaattg 82
           |||||||||||||||||||
Sbjct: 937 aatttcttggtggcaattg 955
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>emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chromosome X, complete
              sequence
          Length = 167883

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     gaacaagtgtcagtagtaa 28
              |||||||||||||||||||
Sbjct: 104243 gaacaagtgtcagtagtaa 104225
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>gb|AC007593.5|AC007593 Drosophila melanogaster, chromosome 2R, region 42E-43A, BAC clone
             BACR01C10, complete sequence
          Length = 173702

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    ttggtggcaattgtacctg 88
             |||||||||||||||||||
Sbjct: 97459 ttggtggcaattgtacctg 97441
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>emb|BX815255.1|CNS0AAT4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS47ZB03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2132

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 59   gccagaatttcttggtggcaattgtacctgt 89
            |||||| ||||||||||||| ||| ||||||
Sbjct: 1033 gccagattttcttggtggcacttgcacctgt 1063
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>gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B16 genomic sequence, complete
             sequence
          Length = 100685

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 59    gccagaatttcttggtggcaattgtacctgt 89
             |||||| ||||||||||||| ||| ||||||
Sbjct: 83713 gccagattttcttggtggcacttgcacctgt 83743
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>emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chromosome X, complete
            sequence
          Length = 227248

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   gaacaagtgtcagtagtaa 28
            |||||||||||||||||||
Sbjct: 5416 gaacaagtgtcagtagtaa 5398
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>dbj|AK118304.1| Arabidopsis thaliana At1g75370 mRNA for putative sec14 cytosolic
            factor, complete cds, clone: RAFL19-59-B02
          Length = 2151

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                           
Query: 59   gccagaatttcttggtggcaattgtacctgt 89
            |||||| ||||||||||||| ||| ||||||
Sbjct: 1051 gccagattttcttggtggcacttgcacctgt 1081
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>gb|AY103910.1| Zea mays PCO104496 mRNA sequence
          Length = 1523

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   tggcaattgtacctgtccc 92
            |||||||||||||||||||
Sbjct: 1434 tggcaattgtacctgtccc 1452
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>gb|AF145672.1|AF145672 Drosophila melanogaster clone GH12174 BcDNA.GH12174 (BcDNA.GH12174)
           mRNA, complete cds
          Length = 3662

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 70  ttggtggcaattgtacctg 88
           |||||||||||||||||||
Sbjct: 471 ttggtggcaattgtacctg 453
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>gb|AE003789.5| Drosophila melanogaster chromosome 2R, section 6 of 73 of the complete
              sequence
          Length = 415717

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     ttggtggcaattgtacctg 88
              |||||||||||||||||||
Sbjct: 384327 ttggtggcaattgtacctg 384309


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 911,483
Number of Sequences: 3902068
Number of extensions: 911483
Number of successful extensions: 55055
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54953
Number of HSP's gapped (non-prelim): 101
length of query: 121
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 100
effective length of database: 17,151,101,840
effective search space: 1715110184000
effective search space used: 1715110184000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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