ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29p10 |
|---|---|
| Clone Library Name | barley_pub |
>PSB2_ORYSA (Q9LST6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome alpha subunit D) (20S proteasome subunit beta-4) Length = 212 Score = 346 bits (888), Expect = 3e-95 Identities = 169/186 (90%), Positives = 179/186 (96%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 MECVIGVVGRD AVVAADTSAVQSILVHKTDEDK+M+LDSHKLMGASGEPGDRVQFTEFI Sbjct: 1 MECVIGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 QKNLHLYQFRNN+PLSTAATANFTRGELATALRKNPY VN++LAG+D D GAS+YYIDYI Sbjct: 61 QKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYI 120 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIK 634 AT HKI+KGAFGYGSYFCLSLMDKLY PDM+VEEAVDLVDKCIKEIRLRLVVAPQNF IK Sbjct: 121 ATFHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEIRLRLVVAPQNFIIK 180 Query: 635 IVDKDG 652 IVDK+G Sbjct: 181 IVDKEG 186
>PSB2B_ARATH (O24633) Proteasome subunit beta type 2-B (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-2) (Proteasome component GA) Length = 199 Score = 305 bits (780), Expect = 1e-82 Identities = 147/186 (79%), Positives = 166/186 (89%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 MECV G+VG FA+VAADTSAV SIL+HK EDKIM LDSHKL+ ASGEPGDRVQFTE++ Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYV 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 QKN+ LYQFRN +PLSTAA ANFTRGELATALRKNPYSVNI++AG+DK+AGAS+YYIDYI Sbjct: 61 QKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYI 120 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIK 634 ATLHK+DKGAFGYGSYF LS MD+ Y DM+VEEA++LVDKCI EIR RLV+AP NF IK Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVIAPPNFVIK 180 Query: 635 IVDKDG 652 IVDKDG Sbjct: 181 IVDKDG 186
>PSB2A_ARATH (O23714) Proteasome subunit beta type 2-A (EC 3.4.25.1) (Proteasome| subunit beta type 4) (20S proteasome beta subunit D-1) (Proteasome component GB) Length = 204 Score = 300 bits (769), Expect = 2e-81 Identities = 144/186 (77%), Positives = 167/186 (89%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 MECV G+VG FA+VAADTSAV SIL+HK +EDKIM+LDSHKL+ ASGEPGDRVQFTE++ Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYV 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 QKN+ LY+FRN +PL+TAA ANFTRGELATALRKNPYSVNI++AG+D ++GAS+YYIDYI Sbjct: 61 QKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYI 120 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIK 634 ATLHK+DKGAFGYGSYF LS MD+ Y DM+VEEA++LVDKCI EIR RLVVAP NF IK Sbjct: 121 ATLHKVDKGAFGYGSYFSLSTMDRHYRSDMSVEEAIELVDKCILEIRSRLVVAPPNFVIK 180 Query: 635 IVDKDG 652 IVDKDG Sbjct: 181 IVDKDG 186
>PSB2_SCHPO (Q09720) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 194 Score = 170 bits (431), Expect = 3e-42 Identities = 83/188 (44%), Positives = 127/188 (67%), Gaps = 2/188 (1%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 ME ++ V G+DF + A+ +SAV+ I V K D+DK +L+SH LM GE GD F E+I Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAG-ASMYYID 448 N+ LY R+N+ LS ATA+FTR +LAT+LR + PY VNI+LAG++ + G ++++D Sbjct: 61 AANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLD 120 Query: 449 YIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFA 628 Y+AT ++ GY S++CLS+ D+ Y PD+T++EAV ++ C E++ R+ + + F Sbjct: 121 YLATCVRVPYACQGYSSFYCLSIFDRYYKPDLTIDEAVRIMKLCFDELKKRMPIDFKGFI 180 Query: 629 IKIVDKDG 652 K+VDKDG Sbjct: 181 CKVVDKDG 188
>PSB2_RAT (P40307) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 169 bits (429), Expect = 5e-42 Identities = 82/187 (43%), Positives = 124/187 (66%), Gaps = 1/187 (0%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 ME +IG+ G D+ +VA+D A +I+ K D DK+ + L+ GE GD VQF E+I Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDY 451 QKN+ LY+ RN LS A ANFTR LA LR + PY VN++LAG+D+ G ++YY+DY Sbjct: 61 QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 +A L K A GYG++ LS++D+ Y P ++ E AV+L+ KC++E++ R ++ F++ Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSV 180 Query: 632 KIVDKDG 652 +++DKDG Sbjct: 181 RVIDKDG 187
>PSB2_MOUSE (Q9R1P3) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 169 bits (429), Expect = 5e-42 Identities = 82/187 (43%), Positives = 124/187 (66%), Gaps = 1/187 (0%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 ME +IG+ G D+ +VA+D A +I+ K D DK+ + L+ GE GD VQF E+I Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDY 451 QKN+ LY+ RN LS A ANFTR LA LR + PY VN++LAG+D+ G ++YY+DY Sbjct: 61 QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 +A L K A GYG++ LS++D+ Y P ++ E AV+L+ KC++E++ R ++ F++ Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSV 180 Query: 632 KIVDKDG 652 +++DKDG Sbjct: 181 RVIDKDG 187
>PSB2_NEUCR (Q9P6U7) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 203 Score = 168 bits (425), Expect = 1e-41 Identities = 81/188 (43%), Positives = 121/188 (64%), Gaps = 2/188 (1%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 M ++G+ G+DF ++AA +A++ + K +DK L+ H LM SGE GD VQF E+ Sbjct: 1 MYVLLGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEYT 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDK-DAGASMYYID 448 Q N LY RN LS +A ANF RGELAT+LR + PY+VN++L G D S+Y++D Sbjct: 61 QANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLD 120 Query: 449 YIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFA 628 Y+A+L K+ A GY Y+CLS++DK +HPD+T+ + + L++ C E++ RL + + Sbjct: 121 YLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMT 180 Query: 629 IKIVDKDG 652 +K V KDG Sbjct: 181 VKAVTKDG 188
>PSB2_HUMAN (P49721) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| component C7-I) (Macropain subunit C7-I) (Multicatalytic endopeptidase complex subunit C7-I) Length = 201 Score = 168 bits (425), Expect = 1e-41 Identities = 82/187 (43%), Positives = 124/187 (66%), Gaps = 1/187 (0%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 ME +IG+ G D+ +VA+D A +I+ K D DK+ + L+ GE GD VQF E+I Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDY 451 QKN+ LY+ RN LS A ANFTR LA LR + PY VN++LAG+D+ G ++YY+DY Sbjct: 61 QKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDY 120 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 +A L K A GYG++ LS++D+ Y P ++ E AV+L+ KC++E++ R ++ F++ Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSV 180 Query: 632 KIVDKDG 652 +I+DK+G Sbjct: 181 RIIDKNG 187
>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit| C11) (Proteinase YSCE subunit 11) (Multicatalytic endopeptidase complex subunit C11) Length = 198 Score = 149 bits (376), Expect = 7e-36 Identities = 74/188 (39%), Positives = 114/188 (60%), Gaps = 2/188 (1%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 M+ ++G+ +D ++A+ + + I V K +DK L H LM +GE GD VQF E+I Sbjct: 1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAG-ASMYYID 448 Q N+ LY R + LS A ++F R ELA ++R + PY VN+++ G+DK +Y ID Sbjct: 61 QANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQID 120 Query: 449 YIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFA 628 Y+ T ++ GA GY ++ SL+D Y PDMT EE +DL+ C++E+ R+ + + Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVI 180 Query: 629 IKIVDKDG 652 +KIVDKDG Sbjct: 181 VKIVDKDG 188
>PSB2_CRYNE (Q00826) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 224 Score = 147 bits (371), Expect = 3e-35 Identities = 78/188 (41%), Positives = 115/188 (61%), Gaps = 2/188 (1%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 MEC G+ G+D+ ++A+D A +SI+ K+DE+K+ L H M SGEPGD F E+I Sbjct: 1 MECSFGITGKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYI 60 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAG-ASMYYID 448 ++N+ LY RN+ PL A + + R LA A+R ++PY+VN++L GFD +Y+ID Sbjct: 61 ERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWID 120 Query: 449 YIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFA 628 Y+ T + A G G Y LS MDK ++ DM +E VDL+ KCI E RL + +F Sbjct: 121 YLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI-KFDFN 179 Query: 629 IKIVDKDG 652 ++DK+G Sbjct: 180 CILIDKNG 187
>PSB2_DROME (Q9VQE5) Probable proteasome subunit beta type 2 (EC 3.4.25.1)| Length = 210 Score = 145 bits (367), Expect = 8e-35 Identities = 71/187 (37%), Positives = 113/187 (60%), Gaps = 1/187 (0%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 ME ++G+ G DF ++A+DT +S++ K D+ KI L +M G+ GD +QFT+FI Sbjct: 3 METILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFI 62 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNP-YSVNIILAGFDKDAGASMYYIDY 451 KNLHLY+ + LS + A+FTR LA +R N Y V ++LAG+D G ++YID Sbjct: 63 SKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDS 122 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 I+ G+GS FC S++ + ++ ++ E+A L+ KC+ EI+ RL++ +NF + Sbjct: 123 YGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEV 182 Query: 632 KIVDKDG 652 +VD G Sbjct: 183 YVVDSKG 189
>PSB2_TRYBB (Q9NHC6) Proteasome subunit beta type 2 (EC 3.4.25.1) (20S| proteasome subunit beta-4) Length = 206 Score = 137 bits (344), Expect = 4e-32 Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 12/197 (6%) Frame = +2 Query: 98 ECVIGVVGRDFAVVAA-DTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 E IG +DF +VAA +A I + T EDKI LDSHK++ +GE G R F E++ Sbjct: 3 ETTIGFRCQDFVLVAAAGLNAFYYIKITDT-EDKITELDSHKVVACAGENGPRTHFVEYV 61 Query: 275 QKNLHLYQFRNN-MPLSTAATANFTRGELATALRKNP--YSVNIILAGFDKDA------- 424 + N+ L + R + +ST ATA+F R LA ALR Y VN +LAGFD A Sbjct: 62 KCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVA 121 Query: 425 -GASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 601 GA +YY+DY+ TL ++ G GYG+ F +++D+++ P++T +E V+L+ KC E+ R Sbjct: 122 TGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKR 181 Query: 602 LVVAPQNFAIKIVDKDG 652 +VV+ F K V KDG Sbjct: 182 VVVSNNTFICKAVPKDG 198
>PSB2_CAEEL (P91477) Proteasome subunit beta type 2 (EC 3.4.25.1) (Proteasome| subunit beta 4) Length = 199 Score = 95.9 bits (237), Expect = 9e-20 Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 5/191 (2%) Frame = +2 Query: 95 MECVIGVVGRDFAVVAAD--TSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTE 268 M ++G+ ++ ++AAD T A +IL ++ DK L M GE GD QF + Sbjct: 1 MHFLVGISTENYVILAADKATFAYGAILAD-SENDKEYRLGKKLTMMCIGEEGDVAQFGD 59 Query: 269 FIQKNLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFD-KDAGASMYY 442 + ++NL LY RN +S + +F R +A LR ++ Y+V++++ G+D K+ A + Sbjct: 60 WTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGS 119 Query: 443 IDYIATLHKIDKGAF-GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQ 619 +DY+A F G+ FC ++MD+ Y DMT E + L++KCI E + R V Sbjct: 120 VDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIP 179 Query: 620 NFAIKIVDKDG 652 + + I+DK G Sbjct: 180 GYKVVIIDKKG 190
>PSB1_MOUSE (O09061) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 240 Score = 73.6 bits (179), Expect = 5e-13 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 9/192 (4%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 V+ + G DF++VA+DT + +H D K L ++G SG GD + T+ I+ Sbjct: 39 VLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 98 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 L +Y+ NN ++T A A + + R PY V I+ G D++ ++Y D + + Sbjct: 99 LKMYKHSNNKAMTTGAIAAML-STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 157 Query: 464 HKIDKGAFGYGSYFCLSLMD---------KLYHPDMTVEEAVDLVDKCIKEIRLRLVVAP 616 + A G S L+D + H +T++ A+ LV R V Sbjct: 158 QRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTG 217 Query: 617 QNFAIKIVDKDG 652 I IV K+G Sbjct: 218 DALRICIVTKEG 229
>PSB1_RAT (P18421) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 240 Score = 73.2 bits (178), Expect = 6e-13 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 9/192 (4%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 V+ + G DF++VA+DT + +H D K L ++G SG GD + T+ I+ Sbjct: 39 VLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 98 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 L +Y+ NN ++T A A + + R PY V I+ G D++ ++Y D + + Sbjct: 99 LKMYKHSNNKAMTTGAIAAML-STILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDPVGSY 157 Query: 464 HKIDKGAFGYGSYFCLSLMD---------KLYHPDMTVEEAVDLVDKCIKEIRLRLVVAP 616 + A G S L+D + H +T++ A+ LV R V Sbjct: 158 QRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTG 217 Query: 617 QNFAIKIVDKDG 652 I IV K+G Sbjct: 218 DALRICIVTKEG 229
>PSB1_HUMAN (P20618) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 241 Score = 72.8 bits (177), Expect = 8e-13 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 9/192 (4%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++ + G DFA+VA+DT + +H D K L ++G SG GD + T+ I+ Sbjct: 40 ILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEAR 99 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 L +Y+ NN ++T A A + + R PY V I+ G D++ ++Y D + + Sbjct: 100 LKMYKHSNNKAMTTGAIAAML-STILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 158 Query: 464 HKIDKGAFGYGSYFCLSLMD---------KLYHPDMTVEEAVDLVDKCIKEIRLRLVVAP 616 + A G S L+D + H ++++ A+ LV R V Sbjct: 159 QRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTG 218 Query: 617 QNFAIKIVDKDG 652 I IV K+G Sbjct: 219 DALRICIVTKEG 230
>PSB12_CARAU (Q9IB83) Proteasome subunit beta type 1-B (EC 3.4.25.1) (20S| proteasome beta 6 subunit B) (B6-B) Length = 237 Score = 69.7 bits (169), Expect = 7e-12 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 12/195 (6%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 V+ V G DFA+VA+DT + +H D K L ++G SG GD + T+ I+ Sbjct: 36 VLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEAR 95 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATAL---RKNPYSVNIILAGFDKDAGASMYYIDYI 454 L +Y+ NN +++ A A L+T L R PY V I+ G D++ ++Y D + Sbjct: 96 LKMYKHSNNKSMTSGAIA----AMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPV 151 Query: 455 ATLHKIDKGAFGYGSYFCLSLMD---------KLYHPDMTVEEAVDLVDKCIKEIRLRLV 607 + + A G S L+D + ++ E+AV LV R V Sbjct: 152 GSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDV 211 Query: 608 VAPQNFAIKIVDKDG 652 I I+ K+G Sbjct: 212 YTGDALKICIITKEG 226
>PSB11_CARAU (Q9IB84) Proteasome subunit beta type 1-A (EC 3.4.25.1) (20S| proteasome beta 6 subunit A) (B6-A) Length = 238 Score = 69.7 bits (169), Expect = 7e-12 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 12/195 (6%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 V+ V G DFA+VA+DT + +H D K L ++G SG GD + T+ I+ Sbjct: 37 VLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEAR 96 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATAL---RKNPYSVNIILAGFDKDAGASMYYIDYI 454 L +Y+ NN +++ A A L+T L R PY V I+ G D++ ++Y D + Sbjct: 97 LKMYKHSNNKSMTSGAIA----AMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPV 152 Query: 455 ATLHKIDKGAFGYGSYFCLSLMD---------KLYHPDMTVEEAVDLVDKCIKEIRLRLV 607 + + A G S L+D + ++ E+AV LV R V Sbjct: 153 GSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDV 212 Query: 608 VAPQNFAIKIVDKDG 652 I I+ K+G Sbjct: 213 YTGDALKICIITKEG 227
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 67.8 bits (164), Expect = 3e-11 Identities = 42/182 (23%), Positives = 81/182 (44%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+V +D V+AAD A +++ + KI +D H + +G+ GD + ++ Sbjct: 14 VGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEA 73 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 LY ++ +S A A + + PY ++ G+D+ +Y +D + + Sbjct: 74 KLYYSQSGKRMSVKALATLL-ANIMNGAKYFPYLAWFLVGGYDEK--PKLYSVDMVGGIT 130 Query: 467 KIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDK 646 + G G F S++D Y ++T+EE + L K I R V + + + K Sbjct: 131 EDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITK 190 Query: 647 DG 652 +G Sbjct: 191 EG 192
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 65.5 bits (158), Expect = 1e-10 Identities = 42/182 (23%), Positives = 82/182 (45%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+V ++ V+AADT A +++ + KI +D H + +G+ GD + ++ Sbjct: 14 VGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEA 73 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 +LY+ +S A A + + PY ++ G+D+ ++ +D + + Sbjct: 74 NLYKSTVGKEMSVKALATLL-ANILNGSKYFPYLGWFLVGGYDEK--PRLFSVDMVGGIT 130 Query: 467 KIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDK 646 + + A G G F S++D Y +M+V + + L K I R V + + K Sbjct: 131 EDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITK 190 Query: 647 DG 652 DG Sbjct: 191 DG 192
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 64.7 bits (156), Expect = 2e-10 Identities = 45/182 (24%), Positives = 80/182 (43%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+V D V+AAD A +V+ + KI +D H + +G+ GD + ++ Sbjct: 14 VGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEA 73 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 LY ++ +S A A L A R PY ++ GFD+ +Y +D + + Sbjct: 74 KLYYAQSGKRMSVKALATLLANMLNGA-RMLPYLAWFLVGGFDEK--PRLYSVDMMGGIT 130 Query: 467 KIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDK 646 + A G G F S++D Y D+ V E + + + I R V + + + + Sbjct: 131 EDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITE 190 Query: 647 DG 652 +G Sbjct: 191 EG 192
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 63.2 bits (152), Expect = 7e-10 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 1/183 (0%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G++ D ++A D A LV + K+ +D + M +G GD + Sbjct: 10 VGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEA 69 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 LY+ R + A A L ++ R P+ II+ G+D GA ++ +D + ++ Sbjct: 70 KLYKMRTGRNIPPLACATLLSNILHSS-RMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMN 128 Query: 467 KIDK-GAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVD 643 + A G GS +++ Y DM+VEE + L +K R + ++ ++ Sbjct: 129 EEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVIT 188 Query: 644 KDG 652 KDG Sbjct: 189 KDG 191
>PSB1_DROME (P40304) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| 26 kDa subunit) Length = 235 Score = 62.4 bits (150), Expect = 1e-09 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 4/186 (2%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++ + G DFAV+AADT +H + K+ L ++G++G D + T I+ Sbjct: 32 IVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSLTGSIKVR 91 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATAL---RKNPYSVNIILAGFDKDAGASMYYIDYI 454 + Y+ + ++T A A L+ A+ R PY V+ ILAG D + +Y D I Sbjct: 92 MQSYEHTHLRTMTTEAVAQM----LSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPI 147 Query: 455 ATLHKIDKGAFGYGSYFCLSLMD-KLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 K A G ++D ++ H +M +E+A DK IK + R V + I Sbjct: 148 GHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDA----DK-IKLTKERAVSVASDTFI 202 Query: 632 KIVDKD 649 ++D Sbjct: 203 SAAERD 208
>PSB1_CAEEL (P34286) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta 6) Length = 258 Score = 61.6 bits (148), Expect = 2e-09 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 11/164 (6%) Frame = +2 Query: 113 VVGRDFAVVAADTSAVQS-ILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLH 289 + G +FA+VA+DT Q+ I + D +KI +L+ + ++ SG GD +Q + +Q LH Sbjct: 57 ISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVLQSRLH 116 Query: 290 LYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 Y+F +S A L R PY ILAG D+ +++ D I + + Sbjct: 117 KYRFDYRSDMSVDLCAELLSRNLYYR-RFFPYYTGAILAGIDEHGKGAVFSYDPIGCIER 175 Query: 470 IDKGAFGYGSYFCLSLMD-KLYH---------PDMTVEEAVDLV 571 + A G + +D ++ H P++T++ A+ L+ Sbjct: 176 LGYSASGAAEPMIIPFLDCQIGHVTLSEGYERPELTLDRAISLM 219
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 61.2 bits (147), Expect = 3e-09 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 5/182 (2%) Frame = +2 Query: 122 RDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLY-- 295 +D ++AAD+ + DK+ L + SG D + ++ L +Y Sbjct: 33 KDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRI 92 Query: 296 QFRNNMPLSTAATANFTRGELATAL---RKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 QF ++ + TAAT LA+ + KN S +I+AG+D+ G +Y I +LH Sbjct: 93 QFGHDPSVHTAAT-------LASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGGSLH 145 Query: 467 KIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVDK 646 K G GS F D + +MT EEAV+ + + R + + I++K Sbjct: 146 KQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNK 205 Query: 647 DG 652 DG Sbjct: 206 DG 207
>PSB6_ARATH (Q8LD27) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 1) (20S proteasome beta subunit A-1) (Proteasome component CD) Length = 233 Score = 60.8 bits (146), Expect = 3e-09 Identities = 42/160 (26%), Positives = 70/160 (43%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 +IGV V+ AD+ + V DKI L + + SG D +++++ Sbjct: 15 IIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYF 74 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 LH + ++ P + +AN R + KN +I+ G+DK G +Y I T+ Sbjct: 75 LHQHTIQHGQPATVKVSANLIR--MLAYNNKNMLQTGLIVGGWDKYEGGKIYGIPLGGTV 132 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 + G GS + D+ + +MT EEA LV K + Sbjct: 133 VEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAV 172
>PSB1_YEAST (P23724) Proteasome component C5 (EC 3.4.25.1) (Multicatalytic| endopeptidase complex subunit C5) Length = 241 Score = 60.5 bits (145), Expect = 4e-09 Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 17/200 (8%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++G+ G DFAV+A DT + ++ E K+ + +M A+G D + + + Sbjct: 31 ILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRFKNS 90 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 + Y F +N + +A L R PY V+ I+AG D+D ++Y D + + Sbjct: 91 VKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSY 150 Query: 464 HKIDKGAFGYGSYFCLSLMD------KLYHPD-----------MTVEEAVDLVDKCIKEI 592 + A G + + +D Y P ++VEE + LV Sbjct: 151 EREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSA 210 Query: 593 RLRLVVAPQNFAIKIVDKDG 652 R + I IV KDG Sbjct: 211 TERHIQVGDGLEILIVTKDG 230
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 60.1 bits (144), Expect = 6e-09 Identities = 42/160 (26%), Positives = 74/160 (46%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ +D V A + A L+ DKI +D H +G D ++++ Sbjct: 13 VGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEA 72 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 LY+ RN+ +S A A L ++ R P+ V +L G D++ GA +Y +D + Sbjct: 73 ALYRMRNSEKISIEAAAALAANILHSS-RFYPFIVQTLLGGVDEN-GAKIYSLDPSGGMI 130 Query: 467 KIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIK 586 + G GS +++ Y ++ V+EAVD+ + IK Sbjct: 131 PDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIK 170
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 58.9 bits (141), Expect = 1e-08 Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 3/168 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSA-VQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 +G+ +D ++A + +++ ++HK + K+ +D++ M +G GD +++ Sbjct: 12 VGITLKDAVIMATERRVTMENFIMHKNGK-KLFQIDTYTGMTIAGLVGDAQVLVRYMKAE 70 Query: 284 LHLY--QFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 L LY Q R NMP+ AT + ++ PY V +++ G D ++ ID Sbjct: 71 LELYRLQRRVNMPIEAVATL---LSNMLNQVKYMPYMVQLLVGGID--TAPHVFSIDAAG 125 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 601 + + G GS F +++ Y MTV+E VDLV + I + R Sbjct: 126 GSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQR 173
>PSB1_ARATH (P42742) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta type 6) (20S proteasome beta subunit F-1) (TAS-G39.20) (TAS-F22/FAFP98) (Proteasome component C5) Length = 223 Score = 58.5 bits (140), Expect = 2e-08 Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 14/196 (7%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 + + G D+ V+AADT + D KI L ++ +SG D V+ + + K+ Sbjct: 19 VAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQAD-VKALQKVLKSR 77 Query: 287 HL-YQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 HL YQ ++N +S A A L R PY +L G D++ ++ D + + Sbjct: 78 HLIYQHQHNKQMSCPAMAQLLSNTLYFK-RFFPYYAFNVLGGLDEEGKGCVFTYDAVGSY 136 Query: 464 HKIDKGAFGYGSYFCLSLMD-KLYHPD------------MTVEEAVDLVDKCIKEIRLRL 604 ++ GA G GS + +D +L P ++ EAVDLV R Sbjct: 137 ERVGYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTVFASATERD 196 Query: 605 VVAPQNFAIKIVDKDG 652 + I I+ DG Sbjct: 197 IYTGDKLEIMILKADG 212
>PSA5B_ARATH (Q42134) Proteasome subunit alpha type 5-B (EC 3.4.25.1) (20S| proteasome alpha subunit E-2) (Proteasome component Z) Length = 237 Score = 58.5 bits (140), Expect = 2e-08 Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IGV ++ V+A + + S L+ + +KIM +D H SG D E + Sbjct: 38 IGVKTKEGVVLAVE-KRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVET 96 Query: 287 HLYQFRNNMPLSTAATAN--------FTRGELATALRKNPYSVNIILAGFDKDAGASMYY 442 ++F P++ +T F GE + R P+ V++++AG D++ G S+YY Sbjct: 97 QNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSR--PFGVSLLIAGHDEN-GPSLYY 153 Query: 443 IDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 D T + + A G GS S + + ++ D+T++EA + +K++ + V P N Sbjct: 154 TDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQV-MEEKVTPNN 212 Query: 623 FAI 631 I Sbjct: 213 VDI 215
>PSA5_ORYSA (Q9LSU1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 Score = 58.2 bits (139), Expect = 2e-08 Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IG+ +D V+A + V S L+ + +KIM +D H SG D E + Sbjct: 38 IGLKTKDGVVLAVE-KRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVET 96 Query: 287 HLYQFRNNMPLSTAATAN--------FTRGELATALRKNPYSVNIILAGFDKDAGASMYY 442 ++F P++ +T F G+ + R P+ V++++AG D++ G S+YY Sbjct: 97 QNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSR--PFGVSLLIAGHDEN-GPSLYY 153 Query: 443 IDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 D T + + A G GS S + + Y+ ++T++EA + +K++ + V P N Sbjct: 154 TDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQV-MEEKVTPNN 212 Query: 623 FAI 631 I Sbjct: 213 VDI 215
>PSA5A_ARATH (O81149) Proteasome subunit alpha type 5-A (EC 3.4.25.1) (20S| proteasome alpha subunit E-1) Length = 237 Score = 57.4 bits (137), Expect = 4e-08 Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 8/183 (4%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IGV ++ V+A + + S L+ + +KIM +D H SG D E + Sbjct: 38 IGVKTKEGVVLAVE-KRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVET 96 Query: 287 HLYQFRNNMPLSTAATAN--------FTRGELATALRKNPYSVNIILAGFDKDAGASMYY 442 ++F P++ +T F GE + R P+ V++++AG D++ G S+YY Sbjct: 97 QNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSR--PFGVSLLIAGHDEN-GPSLYY 153 Query: 443 IDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 D T + + A G GS S + + ++ D++++EA + +K++ + V P N Sbjct: 154 TDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQV-MEEKVTPNN 212 Query: 623 FAI 631 I Sbjct: 213 VDI 215
>PSB1_TRYBB (Q9U794) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome beta 6 subunit) Length = 258 Score = 57.0 bits (136), Expect = 5e-08 Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 11/194 (5%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVH-KTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 280 + + G ++ V+ ADT +H ++D K+ L + +SG DR+Q + ++ Sbjct: 55 IAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQLQQMLKY 114 Query: 281 NLHLYQFRNNMPL-STAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 + YQ+ N + ST A A T + R PY ++ G D+ Y D + Sbjct: 115 RIQWYQYNNGGKVPSTKAIAKLT-STMLYQRRFFPYYTFNMIVGIDEKGAGVCYSYDPVG 173 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLY---------HPDMTVEEAVDLVDKCIKEIRLRLVV 610 + G G S F L+D L D+T+EEA+ ++ R + Sbjct: 174 STEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAAERDIF 233 Query: 611 APQNFAIKIVDKDG 652 I+ DG Sbjct: 234 TGDTVCFHIITADG 247
>PSA5_TRYBB (Q9XZG5) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome subunit alpha-5) Length = 246 Score = 56.6 bits (135), Expect = 6e-08 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 8/170 (4%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ D ++AA+ V S LV + +KI+ +D H SG D + + Sbjct: 38 LGIQTPDAVIIAAE-KRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEA 96 Query: 287 HLYQFRNNMPLSTAATA--------NFTRGELATALRKNPYSVNIILAGFDKDAGASMYY 442 ++F + P+S + A F L P+ V++++AG D++ G ++ Sbjct: 97 QNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDEN-GPQLWQ 155 Query: 443 IDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 592 D T + D A G G+ ++ + YH +MTVEEA +L + ++++ Sbjct: 156 TDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQV 205
>PSB6_TOBAC (P93395) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Tobacco cryptogein-induced protein 7) (tcI 7) Length = 234 Score = 56.2 bits (134), Expect = 8e-08 Identities = 42/156 (26%), Positives = 67/156 (42%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 +IGV V+ AD+ + V DKI L + + SG D +++++ Sbjct: 16 IIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYF 75 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 LH + + P + AN TR L + K+ +I+ G+DK G +Y I T+ Sbjct: 76 LHQHTIQLGQPATVKVAANLTR--LLSYNNKDRLQTGMIIGGWDKYEGGKIYGIPPGGTV 133 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLV 571 + G GS + D+ + MT EEA LV Sbjct: 134 LEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLV 169
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 209 Score = 56.2 bits (134), Expect = 8e-08 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 2/158 (1%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 +VAAD+ A + K++ ++ + L +G D + + + +Y+ RN Sbjct: 17 IVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKE 76 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAF-- 487 +S AA + + + S+ ++ G+DK G +YY+D + ++I AF Sbjct: 77 RISVAAASKLL-ANMVYQYKGMGLSMGTMICGWDK-RGPGLYYVD--SEGNRISGTAFSV 132 Query: 488 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 601 G GS + +MD+ Y D+ VEEA DL + I + R Sbjct: 133 GSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYR 170
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome epsilon chain) (Macropain epsilon chain) (Multicatalytic endopeptidase complex epsilon chain) (Proteasome subunit X) (Proteasome chain 6) Length = 208 Score = 55.8 bits (133), Expect = 1e-07 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 2/158 (1%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 +VAAD+ A + K++ ++ + L +G D + + + +Y+ RN Sbjct: 17 IVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKE 76 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAF-- 487 +S AA + + + S+ ++ G+DK G +YY+D + ++I AF Sbjct: 77 RISVAAASKLL-ANMVYQYKGMGLSMGTMICGWDK-RGPGLYYVD--SEGNRISGTAFSV 132 Query: 488 GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 601 G GS + +MD+ Y D+ VEEA DL + I + R Sbjct: 133 GSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYR 170
>PSB6_YEAST (P38624) Proteasome component PRE3 precursor (EC 3.4.25.1)| (Macropain subunit PRE3) (Proteinase YSCE subunit PRE3) (Multicatalytic endopeptidase complex subunit PRE3) Length = 215 Score = 55.8 bits (133), Expect = 1e-07 Identities = 39/162 (24%), Positives = 68/162 (41%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++ V +D ++ AD+ + DK+ + SG D + +Q + Sbjct: 22 IMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYH 81 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 L LY + P + A + F EL + N + II+AG+D +Y I ++ Sbjct: 82 LELYTSQYGTPSTETAASVFK--ELCYENKDN-LTAGIIVAGYDDKNKGEVYTIPLGGSV 138 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 HK+ G GS F DK + +M+ EE VD + + + Sbjct: 139 HKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQ 180
>PSA5_SOYBN (Q9M4T8) Proteasome subunit alpha type 5 (EC 3.4.25.1) (20S| proteasome alpha subunit E) (20S proteasome subunit alpha-5) Length = 237 Score = 55.8 bits (133), Expect = 1e-07 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 8/174 (4%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 VV A + S L+ + +KIM +D H SG D E + ++F Sbjct: 46 VVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGE 105 Query: 314 PLSTAATAN--------FTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 P++ +T F G+ + R P+ V++++AG D++ G S+YY D T + Sbjct: 106 PMTVESTTQALCDLALRFGEGDEESMSR--PFGVSLLIAGHDEN-GPSLYYTDPSGTFWQ 162 Query: 470 IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 + A G GS S + + ++ D+T++EA + +K++ + V P N I Sbjct: 163 CNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQV-MEEKVTPNNVDI 215
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 55.1 bits (131), Expect = 2e-07 Identities = 37/150 (24%), Positives = 67/150 (44%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 VVA D+ A + K++ ++ L +G D + + + +Y+ RN Sbjct: 68 VVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLLARQCRVYELRNKE 127 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGY 493 P+S AA + + + S+ ++ G+DK G +YY+D T + A G Sbjct: 128 PISVAAASKLL-ANMVYQYKGMGLSMGTMICGWDK-RGPGLYYVDSEGTRIPGEAFAVGS 185 Query: 494 GSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 GS + ++D PDM +EA++L + I Sbjct: 186 GSSYAYGVLDGGRRPDMATDEALELARRAI 215
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 54.3 bits (129), Expect = 3e-07 Identities = 39/182 (21%), Positives = 78/182 (42%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++GV+ +D V+ ADT A ++ + K+ L+ + +G D T I N Sbjct: 38 IVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSN 97 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 + L+ N + L + ++L G+D G ++ I + Sbjct: 98 IELHSLYTNRKPRVVTALTMLKQHLFR--YQGHIGAYLVLGGYD-CKGPHLFTIAAHGSS 154 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIVD 643 K+ A G GS +S+++ Y PD+ EA++LV + I+ + + N + ++D Sbjct: 155 DKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVID 214 Query: 644 KD 649 ++ Sbjct: 215 EE 216
>PSMB_SULSO (Q9UXF3) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 208 Score = 54.3 bits (129), Expect = 3e-07 Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ D ++AAD A V K++ + + +G D +QF + KN+ Sbjct: 18 VGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVAD-LQFIYDVLKNI 76 Query: 287 HLYQFRNNM-PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 + Y P+S A L+ A + PY V I++ G+D ++ +DY+ + Sbjct: 77 YHYNSITKYGPISIKGIATRLANVLS-ATKYFPYIVQILIGGYDDQP--RLFNLDYLGDI 133 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 + + A G GS + +++ Y+P MT++EA DL + + Sbjct: 134 TEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAV 173
>PSA5_SCHPO (Q9UT97) Probable proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 247 Score = 53.9 bits (128), Expect = 4e-07 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 9/171 (5%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IGV +D AVV + S L+ +K+ +DSH SG D E + Sbjct: 38 IGVKTKD-AVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQT 96 Query: 287 HLYQFRNNMPLSTAATAN--------FTRGELATA-LRKNPYSVNIILAGFDKDAGASMY 439 ++F + P +T F GE + P+ V +++AG D+ G +Y Sbjct: 97 QNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEH-GPQLY 155 Query: 440 YIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 592 + + T + + A G GS S + K +H DMT+EEA L+ K ++++ Sbjct: 156 HSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQV 206
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 53.9 bits (128), Expect = 4e-07 Identities = 38/150 (25%), Positives = 67/150 (44%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 +VA D+ A + + +K++ ++ L SG D + + K LY RN Sbjct: 85 IVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGE 144 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGY 493 +S +A + + R S+ ++ G+DK G +YY+D T + + G Sbjct: 145 RISVSAASKLL-SNMVYQYRGMDLSMGSMICGWDKK-GPGLYYVDQNGTRLSGNMFSTGS 202 Query: 494 GSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 GS + +MD Y P ++ EEA +L + I Sbjct: 203 GSTYAYGVMDSGYQPSLSPEEAYELGRRAI 232
>PSB1_SCHPO (Q9UQY2) Probable proteasome subunit beta type 1 (EC 3.4.25.1)| Length = 225 Score = 53.1 bits (126), Expect = 7e-07 Identities = 44/199 (22%), Positives = 81/199 (40%), Gaps = 17/199 (8%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 + + G FA++A DT +V ++ + ++ + ++GASG D + + IQ+ + Sbjct: 17 VAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRI 76 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 LY + +S + A R L R PY V +AG DK+ +Y D + + Sbjct: 77 DLYHDNHERKMSAQSCACMVR-TLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGSYE 135 Query: 467 KIDKGAFGYGSYFCLSLMD------KLYHPD-----------MTVEEAVDLVDKCIKEIR 595 + A G + F +D Y P + +EEA+ + Sbjct: 136 REWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLKLEEAMKITTDAFTSAG 195 Query: 596 LRLVVAPQNFAIKIVDKDG 652 R + + +KI+ K+G Sbjct: 196 ERHIEVGDSVLVKIITKEG 214
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 52.8 bits (125), Expect = 9e-07 Identities = 38/150 (25%), Positives = 66/150 (44%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 +VA D+ A + +K++ ++ + L SG D + + K LY RN Sbjct: 85 IVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGE 144 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGY 493 +S +A + + R S+ ++ G+DK G +YY+D T + G Sbjct: 145 RISVSAASKLL-SNMMLQYRGMGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGS 202 Query: 494 GSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 G+ + +MD Y D++ EEA DL + I Sbjct: 203 GNTYAYGVMDSGYRQDLSPEEAYDLGRRAI 232
>PSB1_PETHY (O82531) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit beta-6) Length = 223 Score = 52.8 bits (125), Expect = 9e-07 Identities = 45/195 (23%), Positives = 76/195 (38%), Gaps = 13/195 (6%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 + V G D+ V+AADT + D KI+ L +M +SG D + + Sbjct: 19 VAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRH 78 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 +YQ ++N +S A L YS N+ L G D + ++ D + + Sbjct: 79 LIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNV-LGGLDSEGKGCVFTYDAVGSYE 137 Query: 467 KIDKGAFGYGSYFCLSLMD-KLYHPD------------MTVEEAVDLVDKCIKEIRLRLV 607 ++ + G GS + +D +L P ++ EA+DLV C R + Sbjct: 138 RVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTCFASATERDI 197 Query: 608 VAPQNFAIKIVDKDG 652 I I++ G Sbjct: 198 YTGDRLEIVILNASG 212
>PSB3_GIALA (Q9N9W8) Proteasome subunit beta type 3 (EC 3.4.25.1)| Length = 207 Score = 52.8 bits (125), Expect = 9e-07 Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 4/187 (2%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTS---AVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI 274 +IG+ G D +AAD + Q++ + +E++I L L+G +G D + I Sbjct: 12 LIGIKGXDCVALAADKRLGCSYQTLTIG--NEERIFRLSQSCLLGLAGLQTDVLTTYRQI 69 Query: 275 QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 + +LY + + + ATA L R PY ++ I+AGF+ D + +D I Sbjct: 70 RMKSNLYHLQEDREIRPRATAKMISSFLYKH-RFGPYFISPIIAGFEADGKPYLGAMDTI 128 Query: 455 ATLHKIDKGAF-GYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 L G S F L L + PDM+ +E + L+++ I+ R + + Sbjct: 129 GCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGAHV 188 Query: 632 KIVDKDG 652 ++ +DG Sbjct: 189 VVLRRDG 195
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 52.4 bits (124), Expect = 1e-06 Identities = 38/150 (25%), Positives = 66/150 (44%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 +VA D+ A + +K++ ++ + L SG D + + K LY RN Sbjct: 85 IVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGE 144 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGY 493 +S +A + + R S+ ++ G+DK G +YY+D T + G Sbjct: 145 RISVSAASKLL-SNMMLQYRGMGLSMGSMICGWDKK-GPGLYYVDDNGTRLSGQMFSTGS 202 Query: 494 GSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 G+ + +MD Y D++ EEA DL + I Sbjct: 203 GNTYAYGVMDSGYRQDLSPEEAYDLARRAI 232
>PSB1_ORYSA (O64464) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit beta-6) Length = 221 Score = 52.4 bits (124), Expect = 1e-06 Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 13/195 (6%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 + + G D+ VVAADT + D KI L + +SG GD + + Sbjct: 17 VAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARE 76 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLH 466 LYQ ++N +S A A L R PY +L G D + ++ D + + Sbjct: 77 LLYQHQHNKRMSCPAMAQLLSNTLYYK-RFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYE 135 Query: 467 KIDKGAFGYGSYFCLSLMD-KLYHPD------------MTVEEAVDLVDKCIKEIRLRLV 607 + A G GS + ++D +L P ++ EAVDLV R + Sbjct: 136 RTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDVFASATERDI 195 Query: 608 VAPQNFAIKIVDKDG 652 I +++K G Sbjct: 196 YTGDKLEIVVINKAG 210
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 52.0 bits (123), Expect = 2e-06 Identities = 37/150 (24%), Positives = 67/150 (44%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 + A D+ A + +K++ ++ + L SG D + + K LY RN Sbjct: 85 IAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGE 144 Query: 314 PLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGY 493 +S +A + + R S+ ++ G+DK G +YY+D T + + G Sbjct: 145 RISVSAASKLL-SNMMCQYRGMGLSMGSMICGWDKK-GPGLYYVDEHGTRLSGNMFSTGS 202 Query: 494 GSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 G+ + +MD Y P+++ EEA DL + I Sbjct: 203 GNTYAYGVMDSGYRPNLSPEEAYDLGRRAI 232
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 52.0 bits (123), Expect = 2e-06 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 1/161 (0%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 + GVV +D V+ ADT A + ++V + KI + + +G D T+ I N Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSN 105 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPY-SVNIILAGFDKDAGASMYYIDYIAT 460 L L+ L TAN ++ R Y ++L G D G +Y I + Sbjct: 106 LELHSLSTGR-LPRVVTANRMLKQM--LFRYQGYIGAALVLGGVDV-TGPHLYSIYPHGS 161 Query: 461 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 K+ G GS +++ + + PDM EEA +LV + I Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAI 202
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 51.2 bits (121), Expect = 3e-06 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 4/169 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 + + ++ +VAAD+ A + KI+ ++ + L +G D +F +NL Sbjct: 61 LAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD----CQFWHRNL 116 Query: 287 ----HLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 L++ N +S + + L + R SV ++AG+D + G +YY+D Sbjct: 117 GIKCRLHELANKRRISVSGASKLLANMLYS-YRGMGLSVGTMIAGWD-ETGPGLYYVDNE 174 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 601 K D+ + G GS + ++D Y DM+VEEA +L + I R Sbjct: 175 GGRLKGDRFSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFR 223
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 51.2 bits (121), Expect = 3e-06 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 1/161 (0%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 + GVV +D V+ ADT A + ++V + KI + + +G D T+ I N Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSN 105 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPY-SVNIILAGFDKDAGASMYYIDYIAT 460 L L+ L TAN ++ R Y ++L G D G +Y I + Sbjct: 106 LELHSLTTGR-LPRVVTANRMLKQM--LFRYQGYIGAALVLGGVDV-TGPHLYSIYPHGS 161 Query: 461 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 K+ G GS +++ + + PDM EEA LV + I Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAI 202
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 51.2 bits (121), Expect = 3e-06 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 1/161 (0%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 + GVV +D V+ ADT A + ++V + KI + + +G D T+ I N Sbjct: 46 IAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSN 105 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPY-SVNIILAGFDKDAGASMYYIDYIAT 460 L L+ L TAN ++ R Y ++L G D G +Y I + Sbjct: 106 LELHSLTTGR-LPRVVTANRMLKQM--LFRYQGYIGAALVLGGVDV-TGPHLYSIYPHGS 161 Query: 461 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 K+ G GS +++ + + PDM EEA LV + I Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAI 202
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 50.8 bits (120), Expect = 3e-06 Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 4/160 (2%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL----HLYQF 301 +VAAD+ A + KI+ ++ + L +G D +F +NL L++ Sbjct: 70 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD----CQFWHRNLGIKCRLHEL 125 Query: 302 RNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKG 481 N +S + + L + R SV ++AG+D + G +YY+D K D+ Sbjct: 126 ANKRRISVSGASKLLANMLYS-YRGMGLSVGTMIAGWD-ETGPGLYYVDNEGGRLKGDRF 183 Query: 482 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLR 601 + G GS + ++D Y DM+VEEA +L + I R Sbjct: 184 SVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFR 223
>PSB4_ARATH (Q7DLR9) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome subunit beta type 7) (20S proteasome beta subunit G-1) (Proteasome component H) Length = 246 Score = 50.1 bits (118), Expect = 6e-06 Identities = 36/185 (19%), Positives = 83/185 (44%), Gaps = 2/185 (1%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK- 280 ++ + +D ++A+D + + +++ + H L+GASGE D + ++ + Sbjct: 34 IVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYLDEL 93 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRK-NPYSVNIILAGFDKDAGASMYYIDYIA 457 L+ + + L N+ + K NP ++L G K+ + + + I Sbjct: 94 TLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGV-KNGKSYLGMVSMIG 152 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKI 637 + D A G+G++ ++ +H D++ E+ V L++KC++ + R A I Sbjct: 153 VSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIAK 212 Query: 638 VDKDG 652 + ++G Sbjct: 213 ITEEG 217
>PSB4_HUMAN (P28070) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (HSN3) (HsBPROS26) Length = 264 Score = 49.7 bits (117), Expect = 8e-06 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 11/194 (5%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGD---------RV 256 V+GV V+AAD L + +IM +++ ++GASG+ D ++ Sbjct: 56 VLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQM 115 Query: 257 QFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASM 436 E + + H Y R A + TR + + NP +++ G+ D + + Sbjct: 116 VIDEELLGDGHSYSPR-------AIHSWLTRAMYSRRSKMNPLWNTMVIGGY-ADGESFL 167 Query: 437 YYIDYIATLHKIDKGAFGYGSYFCLSLMDKLY--HPDMTVEEAVDLVDKCIKEIRLRLVV 610 Y+D + ++ A GYG+Y L+ ++ P ++ EA DLV++C++ + R Sbjct: 168 GYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDAR 227 Query: 611 APQNFAIKIVDKDG 652 + F V + G Sbjct: 228 SYNRFQTATVTEKG 241
>PSA4_ARATH (O81148) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome| subunit alpha type 3) (20S proteasome alpha subunit C-1) (Proteasome 27 kDa subunit) (Proteasome component 9) Length = 250 Score = 49.3 bits (116), Expect = 1e-05 Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 3/162 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDR--VQFTEFIQK 280 IG++ +D V+ + +L T +K+ +D H +G D + T +Q Sbjct: 35 IGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATAL-RKNPYSVNIILAGFDKDAGASMYYIDYIA 457 + + ++ MP+ + + T P+ V+ + AG+DK G +Y D Sbjct: 95 QRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 A G + S++ + Y D T EEAV+L K + Sbjct: 155 NYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVL 196
>PSA4_SPIOL (P52427) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) (Proteasome 27 kDa subunit) Length = 250 Score = 48.9 bits (115), Expect = 1e-05 Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 3/164 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDR--VQFTEFIQK 280 IG++ +D V+ + +L T +K+ +D H +G D + T +Q Sbjct: 35 IGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATAL-RKNPYSVNIILAGFDKDAGASMYYIDYIA 457 + + ++ MP+ + + T P+ V+ + AG+DK+ G +Y D Sbjct: 95 QRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 A G + S++ + Y D+T E+AV L K + + Sbjct: 155 NYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSK 198
>PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) Length = 264 Score = 48.9 bits (115), Expect = 1e-05 Identities = 45/194 (23%), Positives = 85/194 (43%), Gaps = 11/194 (5%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGD---------RV 256 V+GV V+AAD L + +IM ++ ++GASG+ D ++ Sbjct: 56 VLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQM 115 Query: 257 QFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASM 436 E + + H Y R A + TR + + NP +++ G+ D + + Sbjct: 116 VIDEELLGDGHSYSPR-------AIHSWLTRAMYSRRSKMNPLWNTMVIGGY-ADGESFL 167 Query: 437 YYIDYIATLHKIDKGAFGYGSYFCLSLMDKLY--HPDMTVEEAVDLVDKCIKEIRLRLVV 610 Y+D + ++ A GYG+Y L+ ++ P ++ EA +LV++C++ + R Sbjct: 168 GYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDAR 227 Query: 611 APQNFAIKIVDKDG 652 + F I V + G Sbjct: 228 SYNRFQIATVTEKG 241
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (20S proteasome subunit E) (Proteasome epsilon chain) Length = 272 Score = 47.8 bits (112), Expect = 3e-05 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL----HLYQF 301 +VAAD+ A + KI+ ++ + L +G D +F +NL L++ Sbjct: 68 MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD----CQFWHRNLGIKCRLHEL 123 Query: 302 RNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKG 481 N +S + L R SV ++AG+D + G +YY+D K + Sbjct: 124 ANKRRISVTGASKLLANILYN-YRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGMRF 181 Query: 482 AFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 + G GS + ++D Y DMTVEEA +L + I Sbjct: 182 SVGSGSPYAYGVLDNGYKYDMTVEEASELARRAI 215
>PSA4_PETHY (O82530) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) Length = 249 Score = 47.8 bits (112), Expect = 3e-05 Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 3/164 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDR--VQFTEFIQK 280 IG+ +D V+ + +L T +K+ +D H +G D + T +Q Sbjct: 35 IGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRK-NPYSVNIILAGFDKDAGASMYYIDYIA 457 + + ++ MP+ + + T P+ V+ + AG+DK+ G ++ D Sbjct: 95 QRYTFSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 A G + S++ + Y D+T EEAV L K + + Sbjct: 155 NYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSK 198
>PSB4_XENLA (P28024) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (Fragment) Length = 242 Score = 47.8 bits (112), Expect = 3e-05 Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 6/189 (3%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 V+GV ++AAD L + +IM ++ + ++GASG+ D + I + Sbjct: 34 VLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVIDQM 93 Query: 284 LHLYQF----RNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDY 451 + + N P A + TR + NP +++ GF + + + Y+D Sbjct: 94 VIDEELVGDGHNYSP--KAIHSWLTRVMYNRRSKMNPLWNTVVIGGF-YNGESFLGYVDK 150 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTV--EEAVDLVDKCIKEIRLRLVVAPQNF 625 + ++ A G+G+Y L+ ++ T+ EEA LVD+C+K + R + F Sbjct: 151 LGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRF 210 Query: 626 AIKIVDKDG 652 I V + G Sbjct: 211 EITTVTESG 219
>PSA7_TRYBB (Q9NDA2) Proteasome subunit alpha type 7 (EC 3.4.25.1) (20S| proteasome subunit alpha-4) Length = 247 Score = 47.4 bits (111), Expect = 4e-05 Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 3/166 (1%) Frame = +2 Query: 101 CVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 280 C +GV G+D + A + +VQ + +T KI LD H + ++G D Q Sbjct: 31 CAVGVKGKDSIIFAVEKKSVQKLQDSRTTR-KIYKLDEHIYLASAGLSADARVVVNHAQL 89 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDY 451 ++ + + + + + PY V+ I+ GF+++ ++ + Sbjct: 90 ECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEP 149 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 T + A G L M+K Y MT + V K + E Sbjct: 150 SGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLE 195
>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) (20S proteasome alpha subunit) Length = 261 Score = 46.2 bits (108), Expect = 8e-05 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 4/158 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IG+ +D V+A D + S LV +KI +D H SG D + + Sbjct: 39 IGIACKDGVVLAVDRR-ITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEA 97 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN----PYSVNIILAGFDKDAGASMYYIDYI 454 +Y+ +S A ++ A ++ P+ V++++AG DK+ A ++ D Sbjct: 98 QIYRLTYGEEISIEMLAKKIC-DIKQAYTQHGGVRPFGVSLLIAGIDKNE-ARLFETDPS 155 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDL 568 L + A G G + L++K Y D+T++E ++L Sbjct: 156 GALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLEL 193
>PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)| (Proteasome beta chain) (Macropain beta chain) (Multicatalytic endopeptidase complex beta chain) (Proteasome chain 3) (RN3) Length = 263 Score = 45.8 bits (107), Expect = 1e-04 Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 6/189 (3%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI-QK 280 V+GV V+AAD L + +IM ++ ++GASG+ D + + Q Sbjct: 55 VLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQM 114 Query: 281 NLHLYQFRNNMPLSTAATANF-TRGELATALRKNPYSVNIILAGFDKDAGASMY--YIDY 451 + F + S A ++ TR + + NP ++ G+ AG + Y+D Sbjct: 115 VIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGY---AGGESFLGYVDM 171 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLY--HPDMTVEEAVDLVDKCIKEIRLRLVVAPQNF 625 + ++ A GYG+Y L+ ++ P ++ EA +LV++C++ + R + F Sbjct: 172 LGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRF 231 Query: 626 AIKIVDKDG 652 + V + G Sbjct: 232 QVATVTEKG 240
>PSB4_YEAST (P30657) Proteasome component PRE4 (EC 3.4.25.1) (Macropain subunit| PRE4) (Proteinase YSCE subunit PRE4) (Multicatalytic endopeptidase complex subunit PRE4) Length = 266 Score = 45.8 bits (107), Expect = 1e-04 Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 13/185 (7%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 ++AAD L+ ++++ + + ++G SG+ D +Q E + K+L +N Sbjct: 54 IIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISD-MQHIERLLKDLVTENAYDN- 111 Query: 314 PLSTAATA---NFTRGELATAL-----RKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 PL+ A A ++ LAT + + NP II+AG + + Y++ + + Sbjct: 112 PLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVNLLGVTYS 171 Query: 470 IDKGAFGYGSYFCLSLMDKLYH-----PDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIK 634 A G+G++ L+ K+ P TV+ A + + ++ + R + +NF++ Sbjct: 172 SPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAMRVLYYRDARSSRNFSLA 231 Query: 635 IVDKD 649 I+DK+ Sbjct: 232 IIDKN 236
>PSA5_DROME (Q95083) Proteasome subunit alpha type 5 (EC 3.4.25.1)| Length = 244 Score = 45.4 bits (106), Expect = 1e-04 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 10/172 (5%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEF--IQK 280 IG+ + V+A + ++V T E KI+ +D H SG D E ++ Sbjct: 38 IGICTPEGVVLAVEKRITSPLMVPSTVE-KIVEVDKHIGCATSGLMADARTLIERARVEC 96 Query: 281 NLHLYQFRNNMPLSTAATANFTRG--------ELATALRKNPYSVNIILAGFDKDAGASM 436 H + + M + + A A T A P+ V I+ AG + + Sbjct: 97 QNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQ-PQL 155 Query: 437 YYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEI 592 +++D T + A G GS + L+ PD+T++EA+D+ +K++ Sbjct: 156 WHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQV 207
>PSA7_CARAU (Q9PTW9) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit alpha 4) Length = 251 Score = 45.1 bits (105), Expect = 2e-04 Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 15/194 (7%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ G+D V+ + +V + +T KI LD H M +G D + Sbjct: 35 VGIRGKDIVVLGVEKKSVAKLQEERTVR-KICALDEHVCMAFAGLTAD----ARIVINRA 89 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRK-------NPYSVNIILAGFDKDAGASMYYI 445 + + + + T + +AT ++ P+ ++ ++ GFD D +Y Sbjct: 90 RVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQT 149 Query: 446 DYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTV--EEAVDLVDKCIKEI------RLR 601 D T H A G + ++K Y + +A+ L K + E+ + Sbjct: 150 DPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGKNIE 209 Query: 602 LVVAPQNFAIKIVD 643 L V +N +KI++ Sbjct: 210 LAVIRRNQPLKILE 223
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 44.7 bits (104), Expect = 2e-04 Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 4/186 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + V+ D V S L+ +K+ +D+H +G D E + Sbjct: 40 LGIKVEEGVVLGVD-KRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEA 98 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN----PYSVNIILAGFDKDAGASMYYIDYI 454 Y++ P+ +L ++ P+ +++AG D G ++ D Sbjct: 99 QTYRYTYGEPIDVDVLVKAIC-DLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPS 156 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIK 634 L + A G G L + ++ Y DMT++EA++L + + E R N I Sbjct: 157 GALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEAS-REETTADNLEIA 215 Query: 635 IVDKDG 652 +VDK G Sbjct: 216 VVDKQG 221
>PSA7_YEAST (P40303) Proteasome component PRE6 (EC 3.4.25.1) (Macropain subunit| PRE6) (Proteinase YSCE subunit PRE6) (Multicatalytic endopeptidase complex subunit PRE6) Length = 254 Score = 44.3 bits (103), Expect = 3e-04 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 7/190 (3%) Frame = +2 Query: 101 CVIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 280 C +GV G++ V+ + + + + K+ +DSH ++ SG D E + Sbjct: 32 CAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARV 91 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRK---NPYSVNIILAGFD-KDAGASMYYID 448 ++ P++ + G + P+ V+ ++AGFD +D +Y + Sbjct: 92 EAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTE 151 Query: 449 YIATLHKIDKGAFGYGSYFCLSLMDKLY---HPDMTVEEAVDLVDKCIKEIRLRLVVAPQ 619 G S ++K Y P TVEE V L + + E+ + + Sbjct: 152 PSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEV---VQTGAK 208 Query: 620 NFAIKIVDKD 649 N I +V D Sbjct: 209 NIEITVVKPD 218
>PSA1_ORYSA (P52428) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2) Length = 270 Score = 43.9 bits (102), Expect = 4e-04 Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 5/185 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ R AV+AA A + H+ K+ + H + +G D + F++ Sbjct: 36 VGLRSRTHAVLAAANKAASELSSHQR---KVFRVADHAGVALAGLTADGRVLSRFLRSEC 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDYIA 457 H + + +P+S A + ++ T K PY V +++AG D ++GA +YY Sbjct: 93 INHAFVYDAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLD-ESGAHLYYNCPSG 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLY--HPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 + A G S + +++ + + D T E+ + IKE + N + Sbjct: 152 NYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTV 211 Query: 632 KIVDK 646 IV + Sbjct: 212 AIVGR 216
>PSA4_ORYSA (Q9LE92) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) Length = 250 Score = 43.1 bits (100), Expect = 7e-04 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 3/164 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV+ D V+ + +L +K+ +DSH +G D + + Sbjct: 35 LGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHA 94 Query: 287 HLYQFRNNMPLSTAATANF---TRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 Y P+ T+ P+ V+ + AG+DK G +Y D Sbjct: 95 QRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 A G S S++ + Y MT EEAV L K + + Sbjct: 155 NYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSK 198
>PSA7_HUMAN (O14818) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit RC6-1) (Proteasome subunit XAPC7) Length = 248 Score = 43.1 bits (100), Expect = 7e-04 Identities = 40/192 (20%), Positives = 77/192 (40%), Gaps = 11/192 (5%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV GRD V+ + +V + +T KI LD + M +G D + Sbjct: 33 VGVRGRDIVVLGVEKKSVAKLQDERTVR-KICALDDNVCMAFAGLTADARIVINRARVEC 91 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIA 457 ++ P++ + + N P+ ++ ++ GFD D +Y D Sbjct: 92 QSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSG 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDM--TVEEAVDLVDKCIKEI------RLRLVVA 613 T H A G G+ ++K Y + T + + LV K + E+ + L V Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211 Query: 614 PQNFAIKIVDKD 649 ++ ++KI++ + Sbjct: 212 RRDQSLKILNPE 223
>PSA5_MOUSE (Q9Z2U1) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 43.1 bits (100), Expect = 7e-04 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 8/151 (5%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEF--IQKNLHLYQFRN 307 V A + S L+ + +KI+ +D+H SG D + ++ H + + Sbjct: 46 VCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105 Query: 308 NMPLSTAATA------NFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 M + + A F + P+ V ++ G D + G ++++D T + Sbjct: 106 TMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVD-EKGPQLFHMDPSGTFVQ 164 Query: 470 IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 562 D A G S S + ++YH MT++EA+ Sbjct: 165 CDARAIGSASEGAQSSLQEVYHKSMTLKEAI 195
>PSA5_HUMAN (P28066) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 43.1 bits (100), Expect = 7e-04 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 8/151 (5%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEF--IQKNLHLYQFRN 307 V A + S L+ + +KI+ +D+H SG D + ++ H + + Sbjct: 46 VCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105 Query: 308 NMPLSTAATA------NFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 M + + A F + P+ V ++ G D + G ++++D T + Sbjct: 106 TMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVD-EKGPQLFHMDPSGTFVQ 164 Query: 470 IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 562 D A G S S + ++YH MT++EA+ Sbjct: 165 CDARAIGSASEGAQSSLQEVYHKSMTLKEAI 195
>PSA7_MOUSE (Q9Z2U0) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit RC6-1) Length = 248 Score = 42.7 bits (99), Expect = 0.001 Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 11/192 (5%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV G+D V+ + +V + +T KI LD + M +G D + Sbjct: 33 VGVRGKDIVVLGVEKKSVAKLQDERTVR-KICALDDNVCMAFAGLTADARIVINRARVEC 91 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIA 457 ++ P++ + + N P+ ++ ++ GFD D +Y D Sbjct: 92 QSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSG 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDM--TVEEAVDLVDKCIKEI------RLRLVVA 613 T H A G G+ ++K Y D T + + LV K + E+ + L V Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKNIELAVM 211 Query: 614 PQNFAIKIVDKD 649 ++ +KI++ + Sbjct: 212 RRDQPLKILNPE 223
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 42.0 bits (97), Expect = 0.002 Identities = 31/160 (19%), Positives = 67/160 (41%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++G++ +D ++ ADT A + +V + +KI + + +G D T+ + Sbjct: 42 IVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQ 101 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 L L++++ + L + + S ++L G D G ++ I + Sbjct: 102 LRLHRYQTGRDSRVVTALTLLKKHLFS--YQGHVSAALVLGGVD-ITGPHLHTIYPHGST 158 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 + G GS +S+ + Y +T +E + LV + I Sbjct: 159 DTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAI 198
>PSA7L_MOUSE (Q9CWH6) Proteasome subunit alpha type 7-like (EC 3.4.25.1)| Length = 250 Score = 42.0 bits (97), Expect = 0.002 Identities = 37/186 (19%), Positives = 73/186 (39%), Gaps = 5/186 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ G + V+ + +V + +T KI LD H M +G D + Sbjct: 35 VGIRGTNIVVLGVEKKSVAKLQDERTVR-KICALDDHVCMAFAGLTADARVVISRARVEC 93 Query: 287 HLYQFRNNMPLSTAATANFT---RGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 ++ P++ F + + + + P+ ++ ++ GFD D +Y D Sbjct: 94 QSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSG 153 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPD--MTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 T H A G + ++K Y D +EA+ L K + E+ + +N + Sbjct: 154 TYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEV---VQSGGKNIEL 210 Query: 632 KIVDKD 649 I+ +D Sbjct: 211 AIIRRD 216
>PSA7_CHICK (O13268) Proteasome subunit alpha type 7 (EC 3.4.25.1) (GPRO-28)| Length = 249 Score = 42.0 bits (97), Expect = 0.002 Identities = 37/175 (21%), Positives = 69/175 (39%), Gaps = 3/175 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV G+D V+ + +V + +T KI LD + M +G D + Sbjct: 33 VGVRGKDIVVLGVEKKSVAKLQDERTVR-KICALDDNVCMAFAGLTADARIVINRARVEC 91 Query: 287 HLYQFRNNMPLSTAATANFT---RGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 ++ P++ + + + R+ P+ ++ ++ GFD D +Y D Sbjct: 92 QSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSG 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 T H A G G+ +K Y +EA++ D IK + L+ Q+ Sbjct: 152 TYHAWKANAIGRGAKSVRVEFEKNY-----TDEAIETDDLTIKLVIKALLEVVQS 201
>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (Proteasome| component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) (Fragment) Length = 104 Score = 41.2 bits (95), Expect = 0.003 Identities = 27/98 (27%), Positives = 47/98 (47%) Frame = +2 Query: 290 LYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 LY RN +S +A + + R S+ ++ G+DK G +YY+D T Sbjct: 2 LYYLRNGARISVSAASKLX-SNMMYQYRGMGLSMGSMICGWDKK-GPGLYYVDENGTRLS 59 Query: 470 IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 + + G G+ + +MD + D+++EEA DL + I Sbjct: 60 GNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAI 97
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 41.2 bits (95), Expect = 0.003 Identities = 31/160 (19%), Positives = 67/160 (41%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++G++ +D ++ ADT A + +V + +KI + + +G D T+ + Sbjct: 42 IVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQ 101 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 L L++++ + L + + S ++L G D G ++ I + Sbjct: 102 LRLHRYQTGRDSRVITALTLLKKHLFS--YQGHVSAALVLGGVD-ITGPHLHTIYPHGST 158 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCI 583 + G GS +S+ + Y +T +E + LV + I Sbjct: 159 DTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESI 198
>PSA5_RAT (P34064) Proteasome subunit alpha type 5 (EC 3.4.25.1) (Proteasome| zeta chain) (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) Length = 241 Score = 40.8 bits (94), Expect = 0.004 Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 8/151 (5%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEF--IQKNLHLYQFRN 307 V A + S L+ + +KI+ +D+H SG D + ++ H + + Sbjct: 46 VCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNE 105 Query: 308 NMPLSTAATA------NFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATLHK 469 M + + A F + P+ V ++ G D + G ++++D T + Sbjct: 106 TMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVD-EKGPQLFHMDPSGTFVQ 164 Query: 470 IDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 562 D A G S S + ++YH T++EA+ Sbjct: 165 CDARAIGSASEGAQSSLQEVYHKSTTLKEAI 195
>PSA7A_XENLA (Q9PVY6) Proteasome subunit alpha type 7-A (EC 3.4.25.1)| (Proteasome subunit alpha 4-A) Length = 248 Score = 40.4 bits (93), Expect = 0.005 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 3/175 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV G++ V+ + +V + +T KI LD + M +G D + Sbjct: 33 VGVRGKEIVVLGVEKKSVAKLQDERTVR-KICALDENVFMAFAGLTADARIVINRARVEC 91 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIA 457 ++ P++ + + N P+ ++ ++ GFD D +Y D Sbjct: 92 QSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSG 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 T H A G G+ ++K Y +EA++ D IK + L+ Q+ Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKHY-----TDEAIETDDLTIKLVIKALLEVVQS 201
>PSMA_AERPE (Q9YC01) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 258 Score = 40.4 bits (93), Expect = 0.005 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 4/179 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + V+AA+ + LV D DKI +D H + +G GD ++ + Sbjct: 42 LGIKTNEGVVIAAEKRFIGP-LVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFT 100 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN----PYSVNIILAGFDKDAGASMYYIDYI 454 ++ P A ++ A ++ P+ V +I AG + D +Y D Sbjct: 101 VRHRLLYGEPPPVELVAKVV-ADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPG 159 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAI 631 A G G + +K Y DM++EEA L K + I +R V + AI Sbjct: 160 GQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAI-IRKTVEDKEKAI 217
>PSA7B_XENLA (Q9PVQ1) Proteasome subunit alpha type 7-B (EC 3.4.25.1)| (Proteasome subunit alpha 4-B) Length = 247 Score = 40.4 bits (93), Expect = 0.005 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 3/175 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV G++ V+ + +V + +T KI LD + M +G D + Sbjct: 33 VGVRGKEIVVLGVEKKSVAKLQDERTVR-KICALDENVFMAFAGLTADARIVINRARVEC 91 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIA 457 ++ P++ + + N P+ ++ ++ GFD D +Y D Sbjct: 92 QSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSG 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 T H A G G+ ++K Y +EA++ D IK + L+ Q+ Sbjct: 152 TYHAWKANAIGRGAKSVREFLEKHY-----TDEAIETDDLTIKLVIKALLEVVQS 201
>PSMA_THEAC (P25156) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 233 Score = 39.7 bits (91), Expect = 0.008 Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 5/162 (3%) Frame = +2 Query: 116 VGRDFA--VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLH 289 +G FA V+ V+S L+ + +KI L+D + SG D +F + + Sbjct: 38 LGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQ 97 Query: 290 LYQFRNNMPLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIAT 460 + ++ ++ + PY V++I AG D+ G ++ D T Sbjct: 98 QEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGT 156 Query: 461 LHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIK 586 +++ A G G +S +++ Y ++ +EAV L K +K Sbjct: 157 INEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALK 198
>PSB3_ONCMY (O73817) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 39.7 bits (91), Expect = 0.008 Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 8/190 (4%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTS-AVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 280 V+ + G+ +AAD VQ+ +V TD KI + +G +G D ++ ++ Sbjct: 11 VMAMKGKQCVAIAADRRFGVQAQMV-TTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKF 69 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIAT 460 L+LY+ + + + L R PY + ++AG D + +I + Sbjct: 70 RLNLYELKEGRQIKPKTFMSMV-SNLLYERRFGPYYIEPVIAGLDPKT-----FEPFICS 123 Query: 461 LHKI-------DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQ 619 L I D G S + + L+ PDM E+ + + + + R V+ Sbjct: 124 LDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGM 183 Query: 620 NFAIKIVDKD 649 +++++KD Sbjct: 184 GVVVQVIEKD 193
>PSA2_YEAST (P23639) Proteasome component Y7 (EC 3.4.25.1) (Macropain subunit| Y7) (Proteinase YSCE subunit 7) (Multicatalytic endopeptidase complex subunit Y7) Length = 250 Score = 39.3 bits (90), Expect = 0.010 Identities = 18/70 (25%), Positives = 39/70 (55%) Frame = +2 Query: 380 PYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEA 559 P+ V++++AG D+ G S+Y +D + A G GS + ++K ++ ++ +E+A Sbjct: 129 PFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDA 188 Query: 560 VDLVDKCIKE 589 + + +KE Sbjct: 189 IHIALLTLKE 198
>PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 233 Score = 39.3 bits (90), Expect = 0.010 Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 3/154 (1%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 V+ ++S L+ + +KI L+D + SG D +F + + + Sbjct: 46 VLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGS 105 Query: 314 PLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGA 484 ++ ++ + PY V++I AG D+ G ++ D T+++ A Sbjct: 106 LVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATA 164 Query: 485 FGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIK 586 G G +S ++K Y ++ +EAV L K +K Sbjct: 165 IGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALK 198
>PSA4_RAT (P21670) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome| component C9) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome subunit L) Length = 261 Score = 39.3 bits (90), Expect = 0.010 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 4/165 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQ--K 280 +G++ D ++AA+ + +L +KI L+ +G D T ++ Sbjct: 35 LGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDYIA 457 +L Q++ +P TA + T K P+ V+++ G+DK G +Y D Sbjct: 95 QRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLY-HPDMTVEEAVDLVDKCIKE 589 G S +S++ + Y +MT++ A+ L K + + Sbjct: 155 NYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNK 199
>PSA4_MOUSE (Q9R1P0) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome| component C9) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome subunit L) Length = 261 Score = 39.3 bits (90), Expect = 0.010 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 4/165 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQ--K 280 +G++ D ++AA+ + +L +KI L+ +G D T ++ Sbjct: 35 LGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDYIA 457 +L Q++ +P TA + T K P+ V+++ G+DK G +Y D Sbjct: 95 QRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLY-HPDMTVEEAVDLVDKCIKE 589 G S +S++ + Y +MT++ A+ L K + + Sbjct: 155 NYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAVKVLNK 199
>PSA4_HUMAN (P25789) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome| component C9) (Macropain subunit C9) (Multicatalytic endopeptidase complex subunit C9) (Proteasome subunit L) Length = 261 Score = 39.3 bits (90), Expect = 0.010 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 4/165 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQ--K 280 +G++ D ++AA+ + +L +KI L+ +G D T ++ Sbjct: 35 LGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDYIA 457 +L Q++ +P TA + T K P+ V+++ G+DK G +Y D Sbjct: 95 QRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLY-HPDMTVEEAVDLVDKCIKE 589 G S +S++ + Y +MT++ A+ L K + + Sbjct: 155 NYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNK 199
>PSA7_RAT (P48004) Proteasome subunit alpha type 7 (EC 3.4.25.1) (Proteasome| subunit RC6-1) Length = 254 Score = 38.9 bits (89), Expect = 0.014 Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 17/198 (8%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLM------GASGEPGDRVQFTE 268 +GV GRD V+ + +V + +T KI LD + M SG D Sbjct: 33 VGVRGRDIVVLGVEKKSVAKLQDERTVR-KICALDDNVCMAFAVVASVSGLTADARIVIN 91 Query: 269 FIQKNLHLYQFRNNMPLSTAATANF---TRGELATALRKNPYSVNIILAGFDKDAGASMY 439 + ++ P++ + + + + P+ ++ ++ GFD D +Y Sbjct: 92 RARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLY 151 Query: 440 YIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDM--TVEEAVDLVDKCIKEI------R 595 D T H A G G+ ++K Y D T + + LV K + E+ Sbjct: 152 QTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGKN 211 Query: 596 LRLVVAPQNFAIKIVDKD 649 + L V ++ +KI+ + Sbjct: 212 IELAVMRRDQPLKILSPE 229
>PSA4_MACFA (Q4R932) Proteasome subunit alpha type 4 (EC 3.4.25.1)| Length = 261 Score = 38.9 bits (89), Expect = 0.014 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 4/165 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQ--K 280 +G++ D ++AA+ + +L +KI L+ +G D T ++ Sbjct: 35 LGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIA 94 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYIDYIA 457 +L Q++ +P TA + T K P+ V+++ G+DK G +Y D Sbjct: 95 QRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPNG 154 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLY-HPDMTVEEAVDLVDKCIKE 589 G S +S++ + Y +MT++ A+ L K + + Sbjct: 155 NYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKSALALAIKVLNK 199
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 37.7 bits (86), Expect = 0.030 Identities = 33/161 (20%), Positives = 66/161 (40%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 ++GV + V+AADT + Q +V + K+ + +G D T+ I N Sbjct: 32 IVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSN 91 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 + L+ + + + L + +I+AG D G+ ++ I + Sbjct: 92 IELHSLYTSREPRVVSALQMLKQHLFK--YQGHIGAYLIVAGVD-PTGSHLFSIHAHGST 148 Query: 464 HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIK 586 + G GS +++++ + D+T EEA+ L I+ Sbjct: 149 DVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQ 189
>PSA4_SCHPO (Q09682) Probable proteasome subunit alpha type 4 (EC 3.4.25.1)| Length = 248 Score = 37.4 bits (85), Expect = 0.039 Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 4/165 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK-- 280 +G+V +D V+AA+ +L + +K+ + + L +G D + ++ Sbjct: 35 LGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVG 94 Query: 281 NLHLYQFRNNMPLSTAA--TANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 +L F MP + +G + P+ V+ + AG+D G ++ + Sbjct: 95 QQYLQTFNEEMPCEQLVRRVCDLKQGYTQYGGLR-PFGVSFLYAGWDHIRGYQLFQSNPS 153 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 + G S SLM + Y D+ ++EA + K + + Sbjct: 154 GNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSK 198
>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 268 Score = 37.4 bits (85), Expect = 0.039 Identities = 35/170 (20%), Positives = 75/170 (44%), Gaps = 4/170 (2%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI-QK 280 V+G+ ++AADT + + +++ ++ + L+G SG+ D I QK Sbjct: 60 VLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQK 119 Query: 281 NLHLYQFRNNMPLSTAATANF-TRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 + +N+ + + A++ TR R NP +++++ G D + + +D Sbjct: 120 MIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRG 179 Query: 458 TLHKIDKGAFGYGSYFCLSLM--DKLYHPDMTVEEAVDLVDKCIKEIRLR 601 ++ A G+ + + L+ K D T EA +L+ C++ + R Sbjct: 180 RSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYR 229
>PSA1_TRYCR (P92188) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| 29 kDa subunit) (TCPR29) Length = 265 Score = 37.4 bits (85), Expect = 0.039 Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 6/158 (3%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G +DF V+ A + + + ++K+ LD H M +G D F++ Sbjct: 36 VGAKNKDFVVLTALKRS--PVAQFSSYQEKVFKLDDHVGMAIAGLVADGRMLARFVRTEC 93 Query: 287 HLYQFR----NNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYI 454 Y++ N +PL + + A K P+ V +++AG+D G +Y+ Sbjct: 94 MNYRYMHDSDNPLPLIAEIVGEKYQRHIQFA-GKRPFGVGLLIAGYD-STGPHLYHTVPS 151 Query: 455 ATLHKIDKGAFGYGSYFCLSLMDKLYH--PDMTVEEAV 562 + A G S + ++K + PD ++E + Sbjct: 152 GDVFDFKATAMGLRSQAARTYLEKHFESFPDCGLDELI 189
>PSB3_CAEEL (Q23237) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| subunit beta 3) Length = 204 Score = 36.6 bits (83), Expect = 0.067 Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 1/183 (0%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 V+ + G + +A+D + + TD+ K+ + +G +G D E I Sbjct: 11 VVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFR 70 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 +LY+ R N + + LA R Y ++AG D + +D I + Sbjct: 71 KNLYELRENRNIKPQVLSEMI-SNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIGCV 129 Query: 464 H-KIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIV 640 D A G G + L + + + +M +E + + I R + + + Sbjct: 130 SAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGAVVYTI 189 Query: 641 DKD 649 KD Sbjct: 190 TKD 192
>PSA73_DROVI (O16812) Proteasome subunit alpha type 7-1B (EC 3.4.25.1)| (Testis-specific proteasome 28 kDa subunit 1B) Length = 245 Score = 36.6 bits (83), Expect = 0.067 Identities = 22/117 (18%), Positives = 49/117 (41%), Gaps = 3/117 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ ++ V+ + A+ S+ + +T KI +D H M +G D Q Sbjct: 32 VGLRTKECVVLGVEKRAIDSLQIERTSR-KIKKIDQHMAMTFAGLTADARVLVSRAQVEA 90 Query: 287 HLYQFRNNMPLSTAATANFT---RGELATALRKNPYSVNIILAGFDKDAGASMYYID 448 ++ + P S + + ++ + P+ V+ ++ GFD+D ++ D Sbjct: 91 QSHRLNFDRPASVEYITRYLARLKQTYTQSVARRPFGVSCLIGGFDEDGRPRLFQTD 147
>PSA7L_HUMAN (Q8TAA3) Proteasome subunit alpha type 7-like (EC 3.4.25.1)| Length = 256 Score = 36.2 bits (82), Expect = 0.088 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 11/173 (6%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGAS------GEPGDRVQFTE 268 +G+ G + V+ + +V + +T KI LD H M + G D Sbjct: 35 VGIRGTNIVVLGVEKKSVAKLQDERTVR-KICALDDHVCMAFAVLTIFIGLTADARVVIN 93 Query: 269 FIQKNLHLYQFRNNMPLSTAATANFT---RGELATALRKNPYSVNIILAGFDKDAGASMY 439 + ++ P++ F + + + + P+ ++ ++ GFD D + +Y Sbjct: 94 RARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLY 153 Query: 440 YIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTV--EEAVDLVDKCIKEI 592 D T H A G + ++K Y D EA+ L K + E+ Sbjct: 154 QTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEV 206
>PSMA_PICTO (Q6L0W3) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 234 Score = 36.2 bits (82), Expect = 0.088 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 5/157 (3%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFI---- 274 +G+ +D V V+S LV KT +KI L+D SG D +F Sbjct: 38 LGIKFKD-GVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISD 96 Query: 275 -QKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDY 451 Q+ + N L + +R PY V+II AG D G ++ D Sbjct: 97 QQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVR--PYGVSIIFAGLD-SIGPRLFDCDP 153 Query: 452 IATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAV 562 T+++ + G G + ++K Y +++ +EA+ Sbjct: 154 AGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAI 190
>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 35.4 bits (80), Expect = 0.15 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 3/157 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGD-RVQFTEF-IQK 280 +GV +D V+A + + S L+ +KI +D H +SG D RV ++ Sbjct: 40 VGVKCKDGVVLAVE-KRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEA 98 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRK-NPYSVNIILAGFDKDAGASMYYIDYIA 457 +H + PL+ ++ T P+ +++AG + +Y D Sbjct: 99 QIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDKP--ELYETDPSG 156 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDL 568 A G G +++ + Y DMT++EA+ L Sbjct: 157 AYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKL 193
>PSA1A_ARATH (P34066) Proteasome subunit alpha type 1-A (EC 3.4.25.1)| (Proteasome subunit alpha type 6) (20S proteasome alpha subunit F-1) (Proteasome 30 kDa subunit) (Proteasome component 2A) (AtPSM30) Length = 278 Score = 35.4 bits (80), Expect = 0.15 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 3/115 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IG+ R V+A A + H+ KI +D H + +G D + +++ Sbjct: 36 IGLRSRSHVVLACVNKAQSELSSHQR---KIFKVDDHIGVAIAGLTADGRVLSRYMRSES 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYY 442 H + + + +P+ + ++ T K PY V +++ G D ++GA +YY Sbjct: 93 INHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLD-ESGAHLYY 146
>PSA1B_ARATH (O23712) Proteasome subunit alpha type 1-B (EC 3.4.25.1)| (Proteasome subunit alpha type 6) (20S proteasome alpha subunit F-2) (Proteasome component 2B) Length = 277 Score = 35.4 bits (80), Expect = 0.15 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 3/115 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 IG+ R V+A A + H+ KI +D H + +G D + +++ Sbjct: 36 IGLRSRSHVVLACVNKAQSELSSHQR---KIFKVDDHIGVAIAGLTADGRVLSRYMRSES 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYY 442 H + + + +P+ + ++ T K PY V +++ G D ++GA +YY Sbjct: 93 INHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLD-ESGAHLYY 146
>PSA1_DROME (P12881) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| 35 kDa subunit) (PROS-Dm35) Length = 279 Score = 35.0 bits (79), Expect = 0.20 Identities = 29/143 (20%), Positives = 61/143 (42%), Gaps = 3/143 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ +D+AV+ A + + KI+ +D H + +G D + +++ Sbjct: 36 VGLKNKDYAVLVALCKPTSEL---SDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSEC 92 Query: 287 HLYQ--FRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 Y+ + P+S T + + T + PY V +++AG+D + G +Y + A Sbjct: 93 LNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYD-ERGPHIYQVTPSA 151 Query: 458 TLHKIDKGAFGYGSYFCLSLMDK 526 T + G S + ++K Sbjct: 152 TFFNCKANSIGSRSQSARTYLEK 174
>PSA1_TRYBR (O96788) Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S| proteasome subunit alpha-6) Length = 266 Score = 35.0 bits (79), Expect = 0.20 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 3/114 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +GV G D+ V+ A S L + ++K LD H M SG D + F++ Sbjct: 36 VGVKGADYVVLTALKRNPVSGL--SSYQEKAFKLDEHVGMAISGLVADGRALSRFLRTEC 93 Query: 287 HLYQFRNNMPLSTAATANFTRGELATALR---KNPYSVNIILAGFDKDAGASMY 439 Y++ ++ A+ + ++ K P+ V +++AG+D+ G +Y Sbjct: 94 MNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQ-GPRLY 146
>PSB3_RAT (P40112) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 34.7 bits (78), Expect = 0.25 Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 8/190 (4%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTS-AVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 280 V+ + G++ +AAD +Q+ +V TD KI + +G +G D + ++ Sbjct: 11 VMAMKGKNCVAIAADRRFGIQAQMV-TTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKF 69 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIAT 460 L+LY+ + + + L R PY ++AG D + +I + Sbjct: 70 RLNLYELKEGRQIKPYTLMSMV-ANLLYEKRFGPYYTEPVIAGLDPKT-----FKPFICS 123 Query: 461 LHKI-------DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQ 619 L I D G S + + L+ P+M E + + + + R V+ Sbjct: 124 LDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGM 183 Query: 620 NFAIKIVDKD 649 + I++KD Sbjct: 184 GVIVHIIEKD 193
>PSB3_MOUSE (Q9R1P1) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 34.3 bits (77), Expect = 0.33 Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 8/190 (4%) Frame = +2 Query: 104 VIGVVGRDFAVVAADTS-AVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 280 V+ + G++ +AAD +Q+ +V TD KI + +G +G D + ++ Sbjct: 11 VMAMKGKNCVAIAADRRFGIQAQMV-TTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKF 69 Query: 281 NLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIAT 460 L+LY+ + + + L R PY ++AG D + +I + Sbjct: 70 RLNLYELKEGRQIKPYTLMSMV-ANLLYEKRFGPYYTEPVIAGLDPKT-----FKPFICS 123 Query: 461 LHKI-------DKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQ 619 L I D G S + + L+ P+M E + + + + R V+ Sbjct: 124 LDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGM 183 Query: 620 NFAIKIVDKD 649 + +++KD Sbjct: 184 GVIVHVIEKD 193
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 34.3 bits (77), Expect = 0.33 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 3/148 (2%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGD-RVQFTEF-IQKNLHLYQFRN 307 VV A + S L+ +KI +D H +SG D RV ++ +H + Sbjct: 48 VVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGE 107 Query: 308 NMPLSTAATANFTRGELATALRK-NPYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGA 484 PL+ ++ T P+ +++AG ++ +Y D A Sbjct: 108 PAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEKP--ELYETDPSGAYFAWKAVA 165 Query: 485 FGYGSYFCLSLMDKLYHPDMTVEEAVDL 568 G G +++ ++ Y DM++EEA+ L Sbjct: 166 IGSGRNTAMAIFEEKYKDDMSLEEAIKL 193
>MT_XENLA (Q05890) Metallothionein (MT)| Length = 62 Score = 33.9 bits (76), Expect = 0.43 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = -2 Query: 581 CTCQQGLPLPRQSCQGGTTCPSATNRSTTRTQMLPCRSCGVSRCSQCSTSMH 426 C C+ G SC GTTC + + T+ + C SC + CS+CS H Sbjct: 6 CKCETGA-----SCSCGTTCSCSNCKCTSCKKS--CCSCCPAECSKCSQGCH 50
>PSA2_NEUCR (Q8X077) Probable proteasome subunit alpha type 2 (EC 3.4.25.1)| Length = 249 Score = 33.9 bits (76), Expect = 0.43 Identities = 18/70 (25%), Positives = 36/70 (51%) Frame = +2 Query: 380 PYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEA 559 PY V++++AG+D + G +Y +D + A G + + ++K Y + +E+A Sbjct: 129 PYGVSLLIAGWD-EGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDA 187 Query: 560 VDLVDKCIKE 589 V + +KE Sbjct: 188 VHIALLTLKE 197
>PSA1_CHICK (O42265) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) Length = 260 Score = 33.5 bits (75), Expect = 0.57 Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 7/188 (3%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + AV+ A A + H + KI+ +D+H + +G D F+++ Sbjct: 35 VGLKSKTHAVLVALKRAQSELAAH---QKKILYVDNHIGISIAGLTADARLLCNFMRQEC 91 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMYYIDYIA 457 + F +P+S + ++ ++ T + PY V +++AG+D D G ++ A Sbjct: 92 LDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSA 150 Query: 458 TLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLV----VAPQNF 625 + G S + +++ + + T +LV ++ +R L + +N Sbjct: 151 NYFDCKAMSIGARSQSARNYLER-HMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNV 209 Query: 626 AIKIVDKD 649 +I IV KD Sbjct: 210 SIGIVGKD 217
>PSA1_CAEEL (O44156) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| subunit alpha 6) Length = 260 Score = 33.5 bits (75), Expect = 0.57 Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 10/191 (5%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ AV+ A A + H + K+ +D+H + +G D ++Q Sbjct: 36 VGIKSETHAVIVALKRAQNDLSSH---QKKVYEIDTHAGVSIAGLLSDGRILARYLQTEC 92 Query: 287 HLYQ--FRNNMPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYID--- 448 ++ ++ +P+ A + + + T + P+ V I++AG+DKD GA + D Sbjct: 93 SSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKD-GAHIIQTDPSA 151 Query: 449 YIATLHKIDKGAFGYGSYFCLSL----MDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAP 616 + ++H GA + L +K + V + L D E L Sbjct: 152 EVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAEENLN----A 207 Query: 617 QNFAIKIVDKD 649 QN +I IV KD Sbjct: 208 QNTSIGIVGKD 218
>PSB3_SCHPO (Q9Y7T8) Probable proteasome subunit beta type 3 (EC 3.4.25.1)| Length = 204 Score = 33.1 bits (74), Expect = 0.74 Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 2/183 (1%) Frame = +2 Query: 107 IGVVGRDFAVVAADTS-AVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKN 283 + + G++ +A+D VQSI + + K+ + +G +G D E + Sbjct: 12 VAMAGKNCVAIASDLRLGVQSISL-TNNFPKVFAMGDKTYLGLTGLATDVQTLYELFRYK 70 Query: 284 LHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIATL 463 ++LY+FR + AN L R PY ++AG D + D I + Sbjct: 71 VNLYKFREERQIQPKTFANLVSSTLYEK-RFGPYFSFPVVAGVSNDNTPFICGFDSIGCI 129 Query: 464 -HKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFAIKIV 640 D G + + + +Y P++ ++ + + + + + R ++ + ++ Sbjct: 130 DFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCISGWGCVVYVI 189 Query: 641 DKD 649 D Sbjct: 190 TAD 192
>PSA1_RAT (P18420) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome nu chain) Length = 263 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + AV+ A A + H + KI+ +D+H + +G D F+++ Sbjct: 36 VGLKSKTHAVLVALKRAQSELAAH---QKKILHVDNHIGISIAGLTADARLLCNFMRQEC 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMY 439 + F +P+S + ++ ++ T + PY V +++AG+D D G ++ Sbjct: 93 LDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHVF 145
>PSA1_PONPY (Q5REN2) Proteasome subunit alpha type 1 (EC 3.4.25.1)| Length = 263 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + AV+ A A + H + KI+ +D+H + +G D F+++ Sbjct: 36 VGLKSKTHAVLVALKRAQSELAAH---QKKILHVDNHIGISIAGLTADARLLCNFMRQEC 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMY 439 + F +P+S + ++ ++ T + PY V +++AG+D D G ++ Sbjct: 93 LDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIF 145
>PSA1_MOUSE (Q9R1P4) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome nu chain) Length = 263 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + AV+ A A + H + KI+ +D+H + +G D F+++ Sbjct: 36 VGLKSKTHAVLVALKRAQSELAAH---QKKILHVDNHIGISIAGLTADARLLCNFMRQEC 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMY 439 + F +P+S + ++ ++ T + PY V +++AG+D D G ++ Sbjct: 93 LDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIF 145
>PSA1_MACFA (Q4R3H2) Proteasome subunit alpha type 1 (EC 3.4.25.1)| Length = 263 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + AV+ A A + H+ KI+ +D+H + +G D F+++ Sbjct: 36 VGLKSKTHAVLVALKRAQSELAAHRK---KILHVDNHIGISIAGLTADARLLCNFMRQEC 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMY 439 + F +P+S + ++ ++ T + PY V +++AG+D D G ++ Sbjct: 93 LDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIF 145
>PSA1_HUMAN (P25786) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| component C2) (Macropain subunit C2) (Multicatalytic endopeptidase complex subunit C2) (Proteasome nu chain) (30 kDa prosomal protein) (PROS-30) Length = 263 Score = 32.3 bits (72), Expect = 1.3 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 3/114 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G+ + AV+ A A + H + KI+ +D+H + +G D F+++ Sbjct: 36 VGLKSKTHAVLVALKRAQSELAAH---QKKILHVDNHIGISIAGLTADARLLCNFMRQEC 92 Query: 287 --HLYQFRNNMPLSTAATANFTRGELATA-LRKNPYSVNIILAGFDKDAGASMY 439 + F +P+S + ++ ++ T + PY V +++AG+D D G ++ Sbjct: 93 LDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIF 145
>PSA1_YEAST (P40302) Proteasome component PRE5 (EC 3.4.25.1) (Macropain subunit| PRE5) (Proteinase YSCE subunit PRE5) (Multicatalytic endopeptidase complex subunit PRE5) Length = 234 Score = 31.6 bits (70), Expect = 2.2 Identities = 38/189 (20%), Positives = 76/189 (40%), Gaps = 20/189 (10%) Frame = +2 Query: 143 ADTSAVQSILVHKTDE-----DKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRN 307 ++T AV L DE KI+ D H + +G D + ++++ + Sbjct: 40 SNTHAVLVALKRNADELSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVF 99 Query: 308 NMPLSTAATANFTRGELATALRKN-------PYSVNIILAGFDKDAGASMYYIDYIATLH 466 N L+ + L +KN PY V +++ G+DK +GA + + Sbjct: 100 NRKLAVERAGHL----LCDKAQKNTQSYGGRPYGVGLLIIGYDK-SGAHLLEFQPSGNVT 154 Query: 467 KIDKGAFGYGSYFCLSLMDKLY--------HPDMTVEEAVDLVDKCIKEIRLRLVVAPQN 622 ++ A G S + +++ +PD ++ V+ + + +++ L + N Sbjct: 155 ELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTV----DN 210 Query: 623 FAIKIVDKD 649 +I IV KD Sbjct: 211 LSIAIVGKD 219
>LCE3C_HUMAN (Q5T5A8) Late cornified envelope protein 3C (Late envelope protein| 15) (Small proline-rich-like epidermal differentiation complex protein 3A) Length = 94 Score = 31.2 bits (69), Expect = 2.8 Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Frame = -2 Query: 578 TCQQGLPLPRQSCQGGTTCPSATNRSTTRTQMLPCRS---------CGVSRCSQCSTSMH 426 +CQQ +Q CQ +CPS + Q LP S CG S S C S H Sbjct: 2 SCQQN----QQQCQPPPSCPSPKCPPKSPAQCLPPPSSDCALSSGGCGPSSESGCCLSHH 57 Query: 425 RH 420 RH Sbjct: 58 RH 59
>LRRN3_RAT (Q9ESY6) Leucine-rich repeats neuronal protein 3 precursor| (Neuronal leucine-rich repeat protein 3) (NLRR-3) Length = 707 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 216 WESRSMILSSSVLWTRMLCTADVSAATTAK 127 W++ S IL SSV WT + T D AA +A+ Sbjct: 541 WKANSKILKSSVKWTAFVKTEDSQAAQSAR 570
>TNR21_HUMAN (O75509) Tumor necrosis factor receptor superfamily member 21| precursor (TNFR-related death receptor 6) (Death receptor 6) Length = 655 Score = 30.8 bits (68), Expect = 3.7 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Frame = -2 Query: 647 PCPQS*WRNSEARRPAGV*SP*CTCQQGLPLPRQSCQGGTTCPS--ATNRSTTRTQMLPC 474 PCP W E A + CTC G+ +C T CP + T T+ + C Sbjct: 112 PCP---WPMIEKLPCAALTDRECTCPPGMFQSNATCAPHTVCPVGWGVRKKGTETEDVRC 168 Query: 473 RSCGVSRCSQCSTSM 429 + C S +S+ Sbjct: 169 KQCARGTFSDVPSSV 183
>PSA4_DROME (P18053) Proteasome subunit alpha type 4 (EC 3.4.25.1) (Proteasome| 29 kDa subunit) (PROS-Dm29) Length = 264 Score = 30.8 bits (68), Expect = 3.7 Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 3/117 (2%) Frame = +2 Query: 107 IGVVGRDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL 286 +G++ D ++AA+ + +L +KI L+ + + +G D T ++ Sbjct: 35 LGILAEDGILLAAECRSTNKLLDSAIPSEKIYRLNDNMVCSVAGITSDANVLTSELRLIA 94 Query: 287 HLYQFRNN--MPLSTAATANFTRGELATALR-KNPYSVNIILAGFDKDAGASMYYID 448 YQF +P + + T K P+ V+++ G+D G +Y D Sbjct: 95 QRYQFSYGEVIPCEQLVSHLCDIKQAYTQYGGKRPFGVSLLYMGWDNKYGYQLYQSD 151
>APRN_ENTHI (P20301) Antigenic protein NP1 (Non-pathogenic protein 1)| (Fragment) Length = 640 Score = 30.4 bits (67), Expect = 4.8 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Frame = +2 Query: 242 PGDRVQFTEFIQKNLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDK- 418 PG+R+ FT +NL Q+ ++ L + +N+ A L P ++N FD+ Sbjct: 113 PGNRLVFTSRHIRNLEDAQYISDYWLKAISISNY-----AVTLENIPITLN-----FDQR 162 Query: 419 -DAGASMYYIDYIATLHKID 475 DAGA++ ++D T H D Sbjct: 163 VDAGAAVAFVDRWFTQHPSD 182
>LRRN3_MOUSE (Q8CBC6) Leucine-rich repeats neuronal protein 3 precursor| (Neuronal leucine-rich repeat protein 3) (NLRR-3) Length = 707 Score = 30.4 bits (67), Expect = 4.8 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 216 WESRSMILSSSVLWTRMLCTADVSAATTAK 127 W++ S IL SSV WT + T D AA +A+ Sbjct: 541 WKASSKILKSSVKWTAFVKTEDSHAAQSAR 570
>PSA2_CARAU (O73672) Proteasome subunit alpha type 2 (EC 3.4.25.1)| Length = 233 Score = 29.6 bits (65), Expect = 8.2 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 3/155 (1%) Frame = +2 Query: 134 VVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNM 313 VV A +SIL + KI + H M SG D +K Y Sbjct: 43 VVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQE 102 Query: 314 PLSTAATANFTRGELATALRKN---PYSVNIILAGFDKDAGASMYYIDYIATLHKIDKGA 484 P+ T + + P+ V++++AG+D+D ++ D A Sbjct: 103 PIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDR-PYLFQSDPSGAYFAWKATA 161 Query: 485 FGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKE 589 G + ++K Y+ D+ +E+A+ +KE Sbjct: 162 MGKSYVNGKTFLEKRYNEDLELEDAIHTAILTLKE 196
>PSA1_DICDI (Q27562) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome| subunit C2) Length = 248 Score = 29.6 bits (65), Expect = 8.2 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 3/87 (3%) Frame = +2 Query: 188 EDKIMLLDSHKLMGASGEPGDRVQFTEFIQKNL--HLYQFRNNMPLSTAATANFTRGELA 361 + KI ++D H + SG D +++ + Y + + M + T + ++ Sbjct: 60 QKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVH 119 Query: 362 TA-LRKNPYSVNIILAGFDKDAGASMY 439 T + PY V +++AG+D+ GA +Y Sbjct: 120 TQRYGRRPYGVGLLVAGYDQ-LGAHIY 145
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 29.6 bits (65), Expect = 8.2 Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 4/61 (6%) Frame = -2 Query: 560 PLPRQSCQGGTTCPSATNRSTTRTQMLP----CRSCGVSRCSQCSTSMHRHLYQTLQV*C 393 PLP T CP T T P C C C+QC + + HL Q + C Sbjct: 159 PLP-----SSTLCPICKTSDLTSTSSQPNFNTCTQCHNKVCNQCGFNPNPHLTQVKEWLC 213 Query: 392 L 390 L Sbjct: 214 L 214
>BRM_DROME (P25439) Homeotic gene regulator (EC 3.6.1.-) (ATP-dependent| helicase brm) (Protein brahma) Length = 1638 Score = 29.6 bits (65), Expect = 8.2 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +3 Query: 3 PQITTPLARPSVPKSLPPHEPQPNQQ 80 PQ +P+A PS + PH P P+QQ Sbjct: 14 PQAPSPMAPPSQSPAPSPHSPYPHQQ 39 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,658,073 Number of Sequences: 219361 Number of extensions: 1367785 Number of successful extensions: 5540 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 5116 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5474 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
