ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29p10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY736118.1| Triticum aestivum 20S proteasome beta 4 subunit mRNA, complete cds Length = 654 Score = 991 bits (500), Expect = 0.0 Identities = 545/560 (97%) Strand = Plus / Plus Query: 95 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 154 ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 1 atggagtgcgtcatcggcgtggtgggcagcgacttcgcggtggtggcggcggacacgtcc 60 Query: 155 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 120 Query: 215 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 274 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 121 cacaagctcatgggcgcctccggggagcccggcgaccgcgtgcagttcaccgagttcatc 180 Query: 275 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 240 Query: 335 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 394 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 241 gccaacttcacccgcggcgagctcgccaccgccctgcgcaagaatccctactccgtaaac 300 Query: 395 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 454 || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 301 atcatacttgcagggtttgataaagacgctggtgcatcgatgtactacattgactacatc 360 Query: 455 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 514 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 361 gcgacgctccacaagatcgacaagggagcattcgggtacgggtcgtacttctgtctgtcg 420 Query: 515 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 574 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctgatggacaagttgtaccgccctgacatgactgtcgaggaagcggtagaccttgttgac 480 Query: 575 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 634 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 540 Query: 635 attgtggacaaggatggcgc 654 || ||||||||||||||||| Sbjct: 541 atcgtggacaaggatggcgc 560
>ref|XM_469367.1| Oryza sativa (japonica cultivar-group), mRNA Length = 885 Score = 452 bits (228), Expect = e-124 Identities = 438/508 (86%) Strand = Plus / Plus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 57 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 116 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 117 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 176 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 254 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 177 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 236 Query: 255 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 314 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 237 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 296 Query: 315 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 374 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 297 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 356 Query: 375 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 434 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 357 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 416 Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 417 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 476 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 477 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 536 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 537 aagctgttgatcttgttgacaagtgcat 564
>dbj|AK105847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G05, full insert sequence Length = 1250 Score = 452 bits (228), Expect = e-124 Identities = 438/508 (86%) Strand = Plus / Plus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 470 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 529 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 530 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 589 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 254 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 590 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 649 Query: 255 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 314 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 650 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 709 Query: 315 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 374 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 710 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 769 Query: 375 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 434 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 770 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 829 Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 830 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 889 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 890 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 949 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 950 aagctgttgatcttgttgacaagtgcat 977
>dbj|AK099128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C17, full insert sequence Length = 926 Score = 452 bits (228), Expect = e-124 Identities = 438/508 (86%) Strand = Plus / Plus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 73 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 132 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 133 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 192 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 254 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 193 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 252 Query: 255 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 314 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 253 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 312 Query: 315 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 374 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 313 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 372 Query: 375 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 434 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 373 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 432 Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 433 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 492 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 493 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 552 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 553 aagctgttgatcttgttgacaagtgcat 580
>dbj|AK061228.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A02, full insert sequence Length = 968 Score = 452 bits (228), Expect = e-124 Identities = 438/508 (86%) Strand = Plus / Plus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 112 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 171 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 172 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 231 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 254 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 232 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 291 Query: 255 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 314 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 292 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 351 Query: 315 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 374 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 352 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 411 Query: 375 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 434 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 412 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 471 Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 472 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 531 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 532 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 591 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 592 aagctgttgatcttgttgacaagtgcat 619
>dbj|AB026566.1| Oryza sativa (japonica cultivar-group) OsPBD1 mRNA for beta 4 subunit of 20S proteasome, complete cds Length = 882 Score = 444 bits (224), Expect = e-121 Identities = 437/508 (86%) Strand = Plus / Plus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || |||||||||||| |||||| Sbjct: 101 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacatcgcgg 160 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 161 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 220 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccgcg 254 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| | Sbjct: 221 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccggg 280 Query: 255 tgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatgc 314 |||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| | Sbjct: 281 tgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatcc 340 Query: 315 cgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccctccgca 374 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct: 341 cgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccctgcgga 400 Query: 375 agaatccctactctgtaaacattatacttgcagggtttgataaagatgccggtgcatcga 434 ||||||| |||| ||| ||| | | ||||| || | |||| |||| ||||| || Sbjct: 401 agaatccgtactatgtcaacgtgttgcttgctggatatgattcggatgttggtgcctctt 460 Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 461 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 520 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 521 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 580 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 581 aagctgttgatcttgttgacaagtgcat 608
>gb|BT017976.1| Zea mays clone EL01N0524H02.c mRNA sequence Length = 922 Score = 371 bits (187), Expect = 2e-99 Identities = 448/535 (83%) Strand = Plus / Plus Query: 114 tggtcggccgcgacttcgcggtggtggcggcggacacgtcggccgtgcagagcatcctcg 173 |||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||||| Sbjct: 172 tggttggccgcgacttcgcggtggtggcggccgacacctccgccgtgcagagtatcctcg 231 Query: 174 tccacaagacggacgaggacaagatcatgctcctcgactcccacaagctcatgggcgcct 233 |||||||||| ||||||||||| | ||| |||||||||| |||||||| ||||||| | Sbjct: 232 tccacaagactgacgaggacaaagtaatggtcctcgactcgcacaagctgttgggcgctt 291 Query: 234 ccggcgagcccggcgaccgcgtgcagttcaccgagttcatccagaagaacctccacctct 293 | || ||||| || ||||| |||||||| || |||||||| ||||||||||||||||| | Sbjct: 292 caggggagcctggtgaccgggtgcagtttacggagttcatacagaagaacctccacctgt 351 Query: 294 accagttccgcaacaacatgccgctcagcaccgccgccaccgccaacttcacccgcggcg 353 ||||||| ||||||| ||| ||||| |||||||| | ||||||||||| ||||||| Sbjct: 352 accagtttcgcaacaccatcccgctgtcaaccgccgctgctgccaacttcacacgcggcg 411 Query: 354 agctcgccaccgccctccgcaagaatccctactctgtaaacattatacttgcagggtttg 413 |||||||||| ||||| || |||||||| ||| || || |||| || | || | | Sbjct: 412 agctcgccacagcccttcgtaagaatccatacatggtcaatgttattctcggtggttacg 471 Query: 414 ataaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcg 473 |||| |||| ||||| ||| |||||||||| |||||||| ||||| | |||||||||| Sbjct: 472 ataaggatgttggtgcctcgctgtactacatcgactacattgcgaccttgcacaagatcg 531 Query: 474 acaagggagcatttgggtacgggtcgtacttctgtttgtcgctgatggacaagttgtacc 533 ||||||| || ||||||||||| ||||| ||||| |||| |||||||||||| |||||| Sbjct: 532 acaagggcgcttttgggtacggatcgtatttctgcctgtctctgatggacaagctgtacc 591 Query: 534 accctgacatgactgtcgaggaagcggtagaccttgttgacaagtgcatcaaggagatca 593 ||| |||||||| || |||||||||||||| || |||||||||||||| ||||||||| Sbjct: 592 gcccggacatgaccgttgaggaagcggtagatctcgttgacaagtgcattaaggagatcc 651 Query: 594 gactccggctggtcgtcgcgcctcagaatttcgccatcaagattgtggacaagga 648 | || |||||||| || ||||| ||||| |||| |||||||| || |||||||| Sbjct: 652 ggctgcggctggttgtggcgccccagaacttcgtgatcaagatcgtagacaagga 706
>gb|BT017738.1| Zea mays clone EL01N0449B05.c mRNA sequence Length = 944 Score = 369 bits (186), Expect = 8e-99 Identities = 462/554 (83%) Strand = Plus / Plus Query: 95 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 154 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 40 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 99 Query: 155 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 214 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 100 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 159 Query: 215 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 274 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 160 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 219 Query: 275 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 334 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 220 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 279 Query: 335 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 394 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 280 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 339 Query: 395 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 454 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 340 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 399 Query: 455 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 514 || || | ||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 400 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 459 Query: 515 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 574 || |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 460 cttatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 519 Query: 575 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 634 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 520 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 579 Query: 635 attgtggacaagga 648 ||||| |||||||| Sbjct: 580 attgttgacaagga 593
>gb|AY746978.1| Zea mays putative beta 4 proteasome subunit mRNA, complete cds Length = 931 Score = 369 bits (186), Expect = 8e-99 Identities = 462/554 (83%) Strand = Plus / Plus Query: 95 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 154 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 90 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 149 Query: 155 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 214 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 150 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 209 Query: 215 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 274 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 210 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 269 Query: 275 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 334 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 270 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 329 Query: 335 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 394 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 330 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 389 Query: 395 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 454 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 390 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 449 Query: 455 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 514 || || | ||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 450 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 509 Query: 515 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 574 || |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 510 cttatggacaagttgtaccacccggacatgactgttgaggaagcggtagacctcgttgat 569 Query: 575 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 634 |||||||| ||||||||| | || |||||||| || ||||| ||||| |||| |||||| Sbjct: 570 aagtgcattaaggagatccggctgcggctggttgtggcgccccagaacttcgtgatcaag 629 Query: 635 attgtggacaagga 648 || || |||||||| Sbjct: 630 atcgtcgacaagga 643
>gb|AY104366.1| Zea mays PCO066933 mRNA sequence Length = 1048 Score = 369 bits (186), Expect = 8e-99 Identities = 462/554 (83%) Strand = Plus / Plus Query: 95 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 154 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 150 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 209 Query: 155 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 214 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 210 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 269 Query: 215 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 274 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 270 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 329 Query: 275 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 334 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 330 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 389 Query: 335 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 394 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 390 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 449 Query: 395 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 454 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 450 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 509 Query: 455 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 514 || || | ||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 510 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttgtct 569 Query: 515 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 574 || |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 570 cttatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 629 Query: 575 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 634 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 630 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 689 Query: 635 attgtggacaagga 648 ||||| |||||||| Sbjct: 690 attgttgacaagga 703
>gb|BT017659.1| Zea mays clone EL01N0440E05.c mRNA sequence Length = 995 Score = 361 bits (182), Expect = 2e-96 Identities = 461/554 (83%) Strand = Plus / Plus Query: 95 atggagtgcgtcatcggagtggtcggccgcgacttcgcggtggtggcggcggacacgtcg 154 ||||||||||| | || ||||| ||||||||||||||| |||||||||| ||||| || Sbjct: 77 atggagtgcgtattgggcgtggttggccgcgacttcgcgctggtggcggccgacacctcc 136 Query: 155 gccgtgcagagcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcc 214 ||||||||||| || |||||||||||||| |||||||||||| | ||| | |||||||| Sbjct: 137 gccgtgcagagtattctcgtccacaagaccgacgaggacaaggtgatggtgctcgactcg 196 Query: 215 cacaagctcatgggcgcctccggcgagcccggcgaccgcgtgcagttcaccgagttcatc 274 || ||||| |||||||| || || ||||| || || || ||||| || || |||||||| Sbjct: 197 caaaagctgatgggcgcttcaggggagcctggtgatcgggtgcaatttacggagttcata 256 Query: 275 cagaagaacctccacctctaccagttccgcaacaacatgccgctcagcaccgccgccacc 334 ||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| || Sbjct: 257 cagaagaacctccacctgtaccagttccggaacaccatcccgctctcaaccgccgccgcc 316 Query: 335 gccaacttcacccgcggcgagctcgccaccgccctccgcaagaatccctactctgtaaac 394 ||||||||||| |||||||| |||||||| ||||| ||||||||||| || || || Sbjct: 317 gccaacttcacacgcggcgaactcgccacagcccttcgcaagaatccatatatggtcaat 376 Query: 395 attatacttgcagggtttgataaagatgccggtgcatcgatgtactacattgactacatc 454 ||||| |||| || | |||||| |||| ||||| || | |||||||| |||||||| Sbjct: 377 attattcttggtggttatgataaggatgttggtgcttccctctactacatcgactacatt 436 Query: 455 gcgacactccacaagatcgacaagggagcatttgggtacgggtcgtacttctgtttgtcg 514 || || | ||||| || ||||| || || ||||||||||| || |||||||||||| | Sbjct: 437 gcaaccttgcacaaaattgacaaaggtgcttttgggtacggatcatacttctgtttggct 496 Query: 515 ctgatggacaagttgtaccaccctgacatgactgtcgaggaagcggtagaccttgttgac 574 || |||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||| Sbjct: 497 cttatggacaagttgtaccacccggacatgactgttgaggaagcagtagatcttgttgac 556 Query: 575 aagtgcatcaaggagatcagactccggctggtcgtcgcgcctcagaatttcgccatcaag 634 ||||||||||||||||| | || || |||| |||||||||||||| || | |||||| Sbjct: 557 aagtgcatcaaggagattcggctgcgattggttgtcgcgcctcagaactttgttatcaag 616 Query: 635 attgtggacaagga 648 ||||| |||||||| Sbjct: 617 attgttgacaagga 630
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 4e-45 Identities = 111/116 (95%) Strand = Plus / Minus Query: 254 gtgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatg 313 ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 27569216 gtgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatc 27569157 Query: 314 ccgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccct 369 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27569156 ccgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccct 27569101 Score = 178 bits (90), Expect = 2e-41 Identities = 156/178 (87%) Strand = Plus / Minus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 27569568 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 27569509 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 27569508 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 27569449 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccg 252 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| Sbjct: 27569448 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccg 27569391 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 27567830 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 27567771 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 27567770 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 27567711 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 27567710 aagctgttgatcttgttgacaagtgcat 27567683 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 30706871 ccgccgccaccgccaacttc 30706890
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 4e-45 Identities = 111/116 (95%) Strand = Plus / Minus Query: 254 gtgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatg 313 ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 27660539 gtgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatc 27660480 Query: 314 ccgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccct 369 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 27660479 ccgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccct 27660424 Score = 178 bits (90), Expect = 2e-41 Identities = 156/178 (87%) Strand = Plus / Minus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 27660891 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 27660832 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 27660831 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 27660772 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccg 252 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| Sbjct: 27660771 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccg 27660714 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 27659153 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 27659094 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 27659093 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 27659034 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 27659033 aagctgttgatcttgttgacaagtgcat 27659006 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 30798295 ccgccgccaccgccaacttc 30798314
>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete sequence Length = 136982 Score = 190 bits (96), Expect = 4e-45 Identities = 111/116 (95%) Strand = Plus / Minus Query: 254 gtgcagttcaccgagttcatccagaagaacctccacctctaccagttccgcaacaacatg 313 ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 10913 gtgcagttcaccgagttcatccagaagaatctccacctgtatcagttccgcaacaacatc 10854 Query: 314 ccgctcagcaccgccgccaccgccaacttcacccgcggcgagctcgccaccgccct 369 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10853 ccgctcagcaccgccgccaccgccaatttcacccgcggcgagctcgccaccgccct 10798 Score = 178 bits (90), Expect = 2e-41 Identities = 156/178 (87%) Strand = Plus / Minus Query: 75 cagcagcggcgtcgccggcgatggagtgcgtcatcggagtggtcggccgcgacttcgcgg 134 |||| |||||| || ||| |||||||||||| ||||| || ||||||||||||||||||| Sbjct: 11265 cagcggcggcggcggcggtgatggagtgcgttatcggggtcgtcggccgcgacttcgcgg 11206 Query: 135 tggtggcggcggacacgtcggccgtgcagagcatcctcgtccacaagacggacgaggaca 194 ||||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 11205 tggtggccgccgacacatcggcggtgcagagcatcctggtccacaagaccgacgaggaca 11146 Query: 195 agatcatgctcctcgactcccacaagctcatgggcgcctccggcgagcccggcgaccg 252 || | ||| | |||||| ||||||||| |||||||| ||||| |||||||||||||| Sbjct: 11145 aggtgatggtgctcgacagccacaagctgatgggcgcgtccggagagcccggcgaccg 11088 Score = 119 bits (60), Expect = 1e-23 Identities = 126/148 (85%) Strand = Plus / Minus Query: 435 tgtactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacg 494 |||| ||||||||||||||||| ||| |||| |||||||| ||||| || |||||||| | Sbjct: 9527 tgtattacattgactacatcgcaacattccataagatcgaaaagggtgcctttgggtatg 9468 Query: 495 ggtcgtacttctgtttgtcgctgatggacaagttgtaccaccctgacatgactgtcgagg 554 | || ||||||||| | ||||||||||||||||| || | || |||||| | ||||||| Sbjct: 9467 gctcctacttctgtctctcgctgatggacaagttatatcgtccagacatgtcagtcgagg 9408 Query: 555 aagcggtagaccttgttgacaagtgcat 582 |||| || || ||||||||||||||||| Sbjct: 9407 aagctgttgatcttgttgacaagtgcat 9380
>ref|NM_117565.2| Arabidopsis thaliana PBD2 (20S PROTEASOME BETA SUBUNIT 2); peptidase/ threonine endopeptidase AT4G14800 (PBD2) mRNA, complete cds Length = 881 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 432 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 491 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 492 aagggagcatttggatacggctcatacttct 522
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 66846 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 66905 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 66906 aagggagcatttggatacggctcatacttct 66936
>emb|Y13175.1|ATY13175 Arabidopsis thaliana mRNA for proteasome subunit prcga Length = 829 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 341 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 400 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 401 aagggagcatttggatacggctcatacttct 431
>gb|BT024588.1| Arabidopsis thaliana At4g14800 mRNA, complete cds Length = 600 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 322 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 381 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 382 aagggagcatttggatacggctcatacttct 412
>gb|AY086350.1| Arabidopsis thaliana clone 24266 mRNA, complete sequence Length = 848 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 433 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 492 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 493 aagggagcatttggatacggctcatacttct 523
>gb|AF043535.1|AF043535 Arabidopsis thaliana 20S proteasome beta subunit PBD2 (PBD2) mRNA, complete cds Length = 828 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 341 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 400 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 401 aagggagcatttggatacggctcatacttct 431
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 416 aaagatgccggtgcatcgatgtactacattgactacatcgcgacactccacaagatcgac 475 ||||| ||||| ||||| | ||||||||||||||||| || || ||||||||| | || Sbjct: 12300 aaagaagccggcgcatctctatactacattgactacattgcaaccctccacaaggttgat 12359 Query: 476 aagggagcatttgggtacgggtcgtacttct 506 |||||||||||||| ||||| || ||||||| Sbjct: 12360 aagggagcatttggatacggctcatacttct 12390
>emb|BX828636.1|CNS0A2J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL24ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacgg 495 ||||||||||||||||| || || ||||||||| | || |||||||||||||| ||||| Sbjct: 367 tactacattgactacattgcaaccctccacaaggttgataagggagcatttggatacgg 425
>gb|BT018812.1| Zea mays clone EL01N0530D10.d mRNA sequence Length = 1829 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 333 ccgccaacttcacccgcggcgagctcgccaccgccctccg 372 |||||||||||||||| ||||||||| |||| |||||||| Sbjct: 119 ccgccaacttcacccgaggcgagctcaccacagccctccg 158
>ref|NM_113162.2| Arabidopsis thaliana PBD1 (PROTEASOME SUBUNIT PRGB); peptidase/ threonine endopeptidase AT3G22630 (PBD1) mRNA, complete cds Length = 854 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 413 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 472 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 473 tcctacttct 482
>ref|NM_113160.2| Arabidopsis thaliana lipid binding AT3G22620 mRNA, complete cds Length = 1295 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 1259 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 1200 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 1199 tcctacttct 1190
>gb|AY143817.1| Arabidopsis thaliana At3g22630/F16J14_20 mRNA, complete cds Length = 615 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 343 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 402 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 403 tcctacttct 412
>emb|Y13692.1|ATY13692 Arabidopsis thaliana mRNA for proteasome subunit prgb Length = 753 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 366 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 425 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 426 tcctacttct 435
>gb|AY052249.1| Arabidopsis thaliana AT3g22630/F16J14_20 mRNA, complete cds Length = 836 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 395 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 454 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 455 tcctacttct 464
>emb|BX826068.1|CNS0A687 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZA02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 743 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 344 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 403 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 404 tcctacttct 413
>dbj|AP000731.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F16J14 Length = 47827 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 47022 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 46963 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 46962 tcctacttct 46953
>gb|AF043534.1|AF043534 Arabidopsis thaliana 20S proteasome beta subunit PBD1 (PBD1) mRNA, complete cds Length = 839 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 437 tactacattgactacatcgcgacactccacaagatcgacaagggagcatttgggtacggg 496 |||||||| |||||||| || || || ||||| ||||||||||||| ||||| ||||| Sbjct: 413 tactacatcgactacattgcaactcttcacaaagtcgacaagggagcttttggttacggc 472 Query: 497 tcgtacttct 506 || ||||||| Sbjct: 473 tcctacttct 482
>emb|BX061810.1|CNS09JUU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 995 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ccggcgaccgcgtgcagttcaccgagttcatc 274 |||||||||| |||||||||||||||| |||| Sbjct: 695 ccggcgaccgtgtgcagttcaccgagtacatc 664
>emb|BX039049.1|CNS092AL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 713 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 243 ccggcgaccgcgtgcagttcaccgagttcatc 274 |||||||||| |||||||||||||||| |||| Sbjct: 596 ccggcgaccgtgtgcagttcaccgagtacatc 565
>emb|BX039048.1|CNS092AK Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 667 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 243 ccggcgaccgcgtgcagttcaccgagttcatc 274 |||||||||| |||||||||||||||| |||| Sbjct: 255 ccggcgaccgtgtgcagttcaccgagtacatc 286
>gb|AE012475.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 383 of 460 of the complete genome Length = 9984 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 315 cgctcagcaccgccgccaccgccaacttcacccgc 349 |||||||||||| |||||||||| || |||||||| Sbjct: 7477 cgctcagcaccgtcgccaccgccgacatcacccgc 7511
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 262 caccgagttcatccagaagaacc 284 ||||||||||||||||||||||| Sbjct: 4174452 caccgagttcatccagaagaacc 4174430
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 315 cgctcagcaccgccgccaccgccaacttcacccgc 349 |||||||||||| |||||||||| || |||||||| Sbjct: 727770 cgctcagcaccgtcgccaccgccgacatcacccgc 727736
>ref|XM_319581.2| Anopheles gambiae str. PEST ENSANGP00000016798 (ENSANGG00000014309), partial mRNA Length = 723 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 243 ccggcgaccgcgtgcagttcaccgagt 269 |||||||||| |||||||||||||||| Sbjct: 263 ccggcgaccgtgtgcagttcaccgagt 289
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 312 tgccgctcagcaccgccgccaccgccaact 341 ||||| ||||||||||||||||||| |||| Sbjct: 4406494 tgccggtcagcaccgccgccaccgcgaact 4406523
>emb|AL512324.14| Human DNA sequence from clone RP11-432I13 on chromosome 10 Contains the 3' end of a breast cancer antigen (NY-BR-1) pseudogene, the 3' end of a novel gene, a pseudogene similar to part of cubilin (intrinsic factor-cobalamin receptor, CUBN), a seven transmembrane helix receptor (FLJ31393) pseudogene, the OR13A1 gene for olfactory receptor family 13 subfamily A member 1 and two CpG islands, complete sequence Length = 168473 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 401 cttgcagggtttgataaagatg 422 |||||||||||||||||||||| Sbjct: 109656 cttgcagggtttgataaagatg 109635
>emb|BX061809.1|CNS09JUT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 976 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 ggcgaccgcgtgcagttcaccgagttcatc 274 |||||||| |||||||||||||||| |||| Sbjct: 245 ggcgaccgtgtgcagttcaccgagtacatc 274
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggcggcgga 147 |||||||| |||||| |||||||||||||| Sbjct: 62988 cggccgcggcttcgccgtggtggcggcgga 63017
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 44.1 bits (22), Expect = 0.57 Identities = 52/62 (83%) Strand = Plus / Minus Query: 164 agcatcctcgtccacaagacggacgaggacaagatcatgctcctcgactcccacaagctc 223 ||||||||||| ||||| | |||| |||||||||||| ||||||| || ||||| ||| Sbjct: 17845 agcatcctcgttcacaaatccaacgaagacaagatcatgttcctcgattcacacaaactc 17786 Query: 224 at 225 || Sbjct: 17785 at 17784 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 341 ttcacccgcggcgagctcgccaccgccctccgcaag 376 ||||| || ||||||||||||||||| || |||||| Sbjct: 17589 ttcactcgtggcgagctcgccaccgctcttcgcaag 17554
>dbj|AK092081.1| Homo sapiens cDNA FLJ34762 fis, clone NT2NE2002100 Length = 2271 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 cttgcagggtttgataaagatg 422 |||||||||||||||||||||| Sbjct: 1627 cttgcagggtttgataaagatg 1648
>gb|AC008770.7| Homo sapiens chromosome 19 clone CTD-2006C1, complete sequence Length = 178184 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 cttgcagggtttgataaagatg 422 |||||||||||||||||||||| Sbjct: 1110 cttgcagggtttgataaagatg 1131
>gb|AC003029.5| Homo sapiens 12 PAC RP3-462E2 (Roswell Park Cancer institute Human PAC Library) complete sequence Length = 137830 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 cttgcagggtttgataaagatg 422 |||||||||||||||||||||| Sbjct: 29369 cttgcagggtttgataaagatg 29390
>gb|AC020951.7| Homo sapiens chromosome 19 clone LLNLR-247E3, complete sequence Length = 35711 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 401 cttgcagggtttgataaagatg 422 |||||||||||||||||||||| Sbjct: 23471 cttgcagggtttgataaagatg 23492
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 320 agcaccgccgccaccgccaact 341 |||||||||||||||||||||| Sbjct: 671249 agcaccgccgccaccgccaact 671270
>gb|AF079797.1|AF079797 Homo sapiens human endogenous retrovirus HML6 gag, pol, and env pseudogenes, complete sequence Length = 7736 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 401 cttgcagggtttgataaagatg 422 |||||||||||||||||||||| Sbjct: 3359 cttgcagggtttgataaagatg 3338
>ref|XM_479408.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1350 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 agcaccgccgccaccgccaac 340 ||||||||||||||||||||| Sbjct: 56 agcaccgccgccaccgccaac 36
>gb|BT018688.1| Zea mays clone EL01N0512B07.d mRNA sequence Length = 1910 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 335 gccaacttcacccgcggcgagctcgccac 363 ||||||||||||| |||||||||| |||| Sbjct: 260 gccaacttcacccccggcgagctcaccac 288
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 aggaagcggtagaccttgttg 572 ||||||||||||||||||||| Sbjct: 1694017 aggaagcggtagaccttgttg 1693997
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 322 caccgccgccaccgccaacttcacccgcg 350 ||||||||||||||||||| | ||||||| Sbjct: 3430244 caccgccgccaccgccaacctgacccgcg 3430272
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggcg 142 |||||||| |||||||||||||||| Sbjct: 21581 cggccgcggcttcgcggtggtggcg 21605
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ggccgcgacttcgcggtggtggcgg 143 ||||||| ||||||||||||||||| Sbjct: 48272 ggccgcggcttcgcggtggtggcgg 48248
>emb|AL138698.15| Human DNA sequence from clone RP11-393H6 on chromosome 13q21.33-22.3 Contains part of the DACH gene for dachshund homolog (Drosophila) (DACH1 FLJ10138), a H3 histone family pseudogene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 102371 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atacttgcagggtttgataaa 418 ||||||||||||||||||||| Sbjct: 86219 atacttgcagggtttgataaa 86239
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 350 ggcgagctcgccaccgccctc 370 ||||||||||||||||||||| Sbjct: 140069 ggcgagctcgccaccgccctc 140089
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 191 gacaagatcatgctcctcgactcccacaa 219 |||||||||||| ||||||| |||||||| Sbjct: 53244 gacaagatcatgttcctcgattcccacaa 53272
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 118 cggccgcgacttcgcggtggtggcg 142 |||||||| |||||||||||||||| Sbjct: 4556646 cggccgcggcttcgcggtggtggcg 4556622 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggcg 142 |||||||| |||||||||||||||| Sbjct: 70128 cggccgcggcttcgcggtggtggcg 70152 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 5365991 cggccgcggcttcgcggtggtggc 5366014 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 4565714 cggccgcggcttcgcggtggtggc 4565691
>gb|AC093553.1| Leishmania donovani clone XX-BNI_Clos11.2, complete sequence Length = 36123 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 accagcagcggcgtcgccggc 93 ||||||||||||||||||||| Sbjct: 13422 accagcagcggcgtcgccggc 13402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 agcaccgccgccaccgccaac 340 ||||||||||||||||||||| Sbjct: 27692825 agcaccgccgccaccgccaac 27692805 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 gcatcaaggagatcagactc 598 |||||||||||||||||||| Sbjct: 18155525 gcatcaaggagatcagactc 18155506
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 aaccagcagcggcgtcgccgg 92 ||||||||||||||||||||| Sbjct: 32728915 aaccagcagcggcgtcgccgg 32728935 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 19977234 ccgccgccaccgccaacttc 19977253 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cagcaccgccgccaccgcca 338 |||||||||||||||||||| Sbjct: 8305435 cagcaccgccgccaccgcca 8305454
>gb|AE009471.1| Brucella melitensis 16M chromosome I, section 28 of 195 of the complete sequence Length = 10783 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 aggaagcggtagaccttgttg 572 ||||||||||||||||||||| Sbjct: 1098 aggaagcggtagaccttgttg 1118
>gb|AC007428.5|AC007428 Homo sapiens, clone RP11-69A1, complete sequence Length = 156180 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atacttgcagggtttgataaa 418 ||||||||||||||||||||| Sbjct: 61465 atacttgcagggtttgataaa 61485
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 aaccagcagcggcgtcgccgg 92 ||||||||||||||||||||| Sbjct: 91710 aaccagcagcggcgtcgccgg 91730
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 agcaccgccgccaccgccaac 340 ||||||||||||||||||||| Sbjct: 149818 agcaccgccgccaccgccaac 149798
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 agcaccgccgccaccgccaac 340 ||||||||||||||||||||| Sbjct: 71927 agcaccgccgccaccgccaac 71907
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 aggaagcggtagaccttgttg 572 ||||||||||||||||||||| Sbjct: 1710939 aggaagcggtagaccttgttg 1710919
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 cccgcggcgagctcgccaccg 365 ||||||||||||||||||||| Sbjct: 1833938 cccgcggcgagctcgccaccg 1833958
>gb|AY106361.1| Zea mays PCO118979 mRNA sequence Length = 1873 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 335 gccaacttcacccgcggcgagctcgccac 363 ||||||||||||| |||||||||| |||| Sbjct: 205 gccaacttcacccccggcgagctcaccac 233
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 ggccgcgacttcgcggtggtggcgg 143 ||||||| ||||||||||||||||| Sbjct: 4172298 ggccgcggcttcgcggtggtggcgg 4172322 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 ggccgcgacttcgcggtggtggcgg 143 ||||||| ||||||||||||||||| Sbjct: 1495791 ggccgcggcttcgcggtggtggcgg 1495815 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 119 ggccgcgacttcgcggtggtggcgg 143 ||||||| ||||||||||||||||| Sbjct: 658107 ggccgcggcttcgcggtggtggcgg 658131 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 119 ggccgcgacttcgcggtggtggcgg 143 ||||||| ||||||||||||||||| Sbjct: 38265 ggccgcggcttcgcggtggtggcgg 38241 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cgctcagcaccgccgccacc 334 |||||||||||||||||||| Sbjct: 3254453 cgctcagcaccgccgccacc 3254472 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 1630983 cggccgcggcttcgcggtggtggc 1630960
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 caccgccgccaccgccaactt 342 ||||||||||||||||||||| Sbjct: 1358543 caccgccgccaccgccaactt 1358523
>gb|DQ298019.1| Klebsiella pneumoniae plasmid pIGMS32, complete sequence Length = 9294 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 ctgtcgaggaagcggtagacc 566 ||||||||||||||||||||| Sbjct: 2517 ctgtcgaggaagcggtagacc 2537
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ccgaaccagcagcggcgtcgc 89 ||||||||||||||||||||| Sbjct: 2386030 ccgaaccagcagcggcgtcgc 2386050
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 aggaagcggtagaccttgttg 572 ||||||||||||||||||||| Sbjct: 1708096 aggaagcggtagaccttgttg 1708076
>gb|AY794223.1| Pseudopleuronectes americanus thyroid hormone receptor alpha mRNA, complete cds Length = 1251 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 catccagaagaacctccacc 290 |||||||||||||||||||| Sbjct: 258 catccagaagaacctccacc 277
>ref|NM_187859.1| Oryza sativa (japonica cultivar-group), Ozsa8303 predicted mRNA Length = 366 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cagcaccgccgccaccgcca 338 |||||||||||||||||||| Sbjct: 42 cagcaccgccgccaccgcca 23
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cggcgagcccggcgaccgcg 254 |||||||||||||||||||| Sbjct: 291730 cggcgagcccggcgaccgcg 291749
>ref|XM_481050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 756 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 caagtgcatcaaggagatca 593 |||||||||||||||||||| Sbjct: 417 caagtgcatcaaggagatca 436
>ref|XM_469780.1| Oryza sativa (japonica cultivar-group), mRNA Length = 354 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 170 ccgccgccaccgccaacttc 151
>ref|XM_468431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1275 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 332 ccgccgccaccgccaacttc 351
>ref|XM_478167.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3174 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 gcatcaaggagatcagactc 598 |||||||||||||||||||| Sbjct: 932 gcatcaaggagatcagactc 951
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 96912 ccgccgccaccgccaacttc 96893
>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0077O14, complete sequence Length = 124915 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 1158 ccgccgccaccgccaacttc 1177
>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0044M15, complete sequence Length = 144568 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 102928 ccgccgccaccgccaacttc 102947
>gb|AC099007.2| Drosophila melanogaster clone BACR16B07, complete sequence Length = 172393 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcgcggtggtggcggcggac 148 |||||||||||||||||||| Sbjct: 80747 tcgcggtggtggcggcggac 80766
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcggtggtggcggcggacac 150 |||||||||||||||||||| Sbjct: 116427 gcggtggtggcggcggacac 116408
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 caacatgccgctcagcaccgccgccacc 334 ||||||| ||||||||||||||||||| Sbjct: 918911 caacatgttgctcagcaccgccgccacc 918884
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 317 ctcagcaccgccgccaccgccaacttcacccgcggc 352 |||| |||||||||||||| || | ||||||||||| Sbjct: 1078173 ctcatcaccgccgccaccgacatcgtcacccgcggc 1078208
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ctcagcaccgccgccaccgc 336 |||||||||||||||||||| Sbjct: 1765668 ctcagcaccgccgccaccgc 1765649
>gb|AY639949.1| Comamonas sp. JS46 mnb locus, partial sequence Length = 9155 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cgcggcgagctcgccaccgc 366 |||||||||||||||||||| Sbjct: 8958 cgcggcgagctcgccaccgc 8977
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 55519 ccgccgccaccgccaacttc 55500
>emb|AJ291740.1|NTA291740 Nicotiana tabacum partial mRNA for putative beta4 proteasome subunit (b4 gene) Length = 401 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 197 atcatgctcctcgactcccacaagctcatggg 228 |||||| ||||||| || |||||||||||||| Sbjct: 103 atcatgatcctcgattctcacaagctcatggg 134
>gb|AC163108.5| Mus musculus BAC clone RP23-46L17 from chromosome 6, complete sequence Length = 234330 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cagcaccgccgccaccgcca 338 |||||||||||||||||||| Sbjct: 64860 cagcaccgccgccaccgcca 64841
>emb|AL591644.14| Human DNA sequence from clone RP11-443B9 on chromosome 9 Contains a laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1) pseudogene, complete sequence Length = 97747 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ctctgtaaacattatacttg 404 |||||||||||||||||||| Sbjct: 50846 ctctgtaaacattatacttg 50827
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ctcgctcgcccgtccgtccccaaa 44 |||||||||||| ||||||||||| Sbjct: 3354420 ctcgctcgcccggccgtccccaaa 3354443
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 cagcagcggcgtcgccggcg 94 |||||||||||||||||||| Sbjct: 2525466 cagcagcggcgtcgccggcg 2525485
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 15572 ccgccgccaccgccaacttc 15591
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 caacatgccgctcagcaccgccgccacc 334 ||||||| ||||||||||||||||||| Sbjct: 234729 caacatgttgctcagcaccgccgccacc 234702
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 307 caacatgccgctcagcaccgccgccacc 334 ||||||| ||||||||||||||||||| Sbjct: 252832 caacatgttgctcagcaccgccgccacc 252805
>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05, complete sequence Length = 152329 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 148411 ccgccgccaccgccaacttc 148392
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 caccgccaacttcacccgcg 350 |||||||||||||||||||| Sbjct: 18118 caccgccaacttcacccgcg 18099
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 4632375 cggccgcggcttcgcggtggtggc 4632398
>gb|BC103138.1| Bos taurus cDNA clone IMAGE:7984259, partial cds Length = 1488 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 tcatccagaagaacctccacctct 293 ||||||||||||||| |||||||| Sbjct: 415 tcatccagaagaaccgccacctct 438
>dbj|AB207102.1| Acidovorax avenae subsp. avenae Hrp gene cluster, complete cds, strain: N1141 Length = 66987 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ggccgcgacttcgcggtggtggcg 142 ||||||| |||||||||||||||| Sbjct: 63008 ggccgcggcttcgcggtggtggcg 63031
>dbj|AB231836.1| Malassezia obtusa mRNA for MnSOD, partial cds Length = 432 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgagctcgccaccgccctcc 371 |||||||||||||||||||| Sbjct: 190 cgagctcgccaccgccctcc 171
>dbj|AB231831.1| Malassezia japonica mRNA for MnSOD, partial cds Length = 432 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgagctcgccaccgccctcc 371 |||||||||||||||||||| Sbjct: 190 cgagctcgccaccgccctcc 171
>dbj|AB231828.1| Malassezia dermatis mRNA for MnSOD, partial cds Length = 432 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 cgagctcgccaccgccctcc 371 |||||||||||||||||||| Sbjct: 190 cgagctcgccaccgccctcc 171
>gb|AE012020.1| Xanthomonas axonopodis pv. citri str. 306, section 398 of 469 of the complete genome Length = 10044 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 318 tcagcaccgccgccaccgccaact 341 ||||||||||||||||||| |||| Sbjct: 3365 tcagcaccgccgccaccgcgaact 3388
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 caacttcacccgcggcgagc 356 |||||||||||||||||||| Sbjct: 3235192 caacttcacccgcggcgagc 3235211
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 ggcgcctccggcgagcccggcgac 250 ||||||| |||||||||||||||| Sbjct: 941440 ggcgccttcggcgagcccggcgac 941417
>ref|NM_057695.3| Drosophila melanogaster CG4038-RA (CG4038), mRNA Length = 971 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcgcggtggtggcggcggac 148 |||||||||||||||||||| Sbjct: 648 tcgcggtggtggcggcggac 667
>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence Length = 36615 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 18188 cggccgcggcttcgcggtggtggc 18165
>gb|AC026696.5| Homo sapiens chromosome 5 clone CTC-348L14, complete sequence Length = 125862 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tactctgtaaacattatact 402 |||||||||||||||||||| Sbjct: 30755 tactctgtaaacattatact 30774
>gb|DQ360292.1| Mus musculus strain CAST/Ei C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 200011 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 acattatacttgcagggttt 412 |||||||||||||||||||| Sbjct: 142310 acattatacttgcagggttt 142329
>gb|DQ360291.1| Mus musculus strain SJL/J C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 144780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 acattatacttgcagggttt 412 |||||||||||||||||||| Sbjct: 130412 acattatacttgcagggttt 130431
>gb|AF076485.2|AF076485 Myxococcus xanthus defective in fruiting (dif) locus, complete sequence Length = 5950 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 1199 cggccgcggcttcgcggtggtggc 1222
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cagcagcggcgtcgccggcg 94 |||||||||||||||||||| Sbjct: 3654346 cagcagcggcgtcgccggcg 3654327 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 ccggcgagcccggcgaccgc 253 |||||||||||||||||||| Sbjct: 423360 ccggcgagcccggcgaccgc 423379
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 tgcagttcaccgagttcatccaga 278 |||||||||||||||||| ||||| Sbjct: 350610 tgcagttcaccgagttcaaccaga 350633
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 8086287 ccgccgccaccgccaacttc 8086268
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcggtggtggcggcggacac 150 |||||||||||||||||||| Sbjct: 23100424 gcggtggtggcggcggacac 23100405 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 10714674 ccgccgccaccgccaacttc 10714655
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 caagtgcatcaaggagatca 593 |||||||||||||||||||| Sbjct: 9478434 caagtgcatcaaggagatca 9478453
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 35223835 ccgccgccaccgccaacttc 35223854
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 caccgccaacttcacccgcg 350 |||||||||||||||||||| Sbjct: 480145 caccgccaacttcacccgcg 480164
>emb|AL606597.4|OSJN00042 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0045P24, complete sequence Length = 124420 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 19819 ccgccgccaccgccaacttc 19800
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 80143 ccgccgccaccgccaacttc 80162
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 caccgccaacttcacccgcg 350 |||||||||||||||||||| Sbjct: 2108442 caccgccaacttcacccgcg 2108423
>gb|AY075501.2| Drosophila melanogaster RE52135 full insert cDNA Length = 966 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcgcggtggtggcggcggac 148 |||||||||||||||||||| Sbjct: 643 tcgcggtggtggcggcggac 662
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ggcggcggacacgtcggccg 158 |||||||||||||||||||| Sbjct: 4127541 ggcggcggacacgtcggccg 4127560
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 cagcaccgccgccaccgcca 338 |||||||||||||||||||| Sbjct: 99366 cagcaccgccgccaccgcca 99385
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0477A12 Length = 138141 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 579 gcatcaaggagatcagactc 598 |||||||||||||||||||| Sbjct: 90831 gcatcaaggagatcagactc 90812
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cggccgcgacttcgcggtggtggc 141 |||||||| ||||||||||||||| Sbjct: 3228401 cggccgcggcttcgcggtggtggc 3228424
>emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 in linkage group 20, complete sequence Length = 165089 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aacctccacctctaccagtt 300 |||||||||||||||||||| Sbjct: 78709 aacctccacctctaccagtt 78728
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 35885 ccgccgccaccgccaacttc 35904
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 119191 ccgccgccaccgccaacttc 119210
>emb|BX324175.6| Zebrafish DNA sequence from clone DKEY-237M7 in linkage group 22, complete sequence Length = 222879 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 aacctccacctctaccagtt 300 |||||||||||||||||||| Sbjct: 100459 aacctccacctctaccagtt 100478
>dbj|AB024024.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15C23 Length = 73921 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 accgccgccaccgccaacttcacc 346 |||||||||||||||| ||||||| Sbjct: 6485 accgccgccaccgccaccttcacc 6508
>dbj|AK120412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B14, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 accagcagcggcgtcgccgg 92 |||||||||||||||||||| Sbjct: 300 accagcagcggcgtcgccgg 319
>dbj|AP005157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0005L24 Length = 155365 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 574 caagtgcatcaaggagatca 593 |||||||||||||||||||| Sbjct: 8464 caagtgcatcaaggagatca 8483
>dbj|AK109559.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B02, full insert sequence Length = 1534 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 727 ccgccgccaccgccaacttc 708
>dbj|AK070976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073E17, full insert sequence Length = 3174 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 gcatcaaggagatcagactc 598 |||||||||||||||||||| Sbjct: 932 gcatcaaggagatcagactc 951
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 cgctcagcaccgccgccacc 334 |||||||||||||||||||| Sbjct: 4384645 cgctcagcaccgccgccacc 4384664
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 ggccgcgacttcgcggtggtggcg 142 ||||||| |||||||||||||||| Sbjct: 654130 ggccgcggcttcgcggtggtggcg 654153
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence Length = 222792 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 acattatacttgcagggttt 412 |||||||||||||||||||| Sbjct: 98213 acattatacttgcagggttt 98232
>dbj|AK060341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-D05, full insert sequence Length = 557 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 cagcaccgccgccaccgcca 338 |||||||||||||||||||| Sbjct: 121 cagcaccgccgccaccgcca 102
>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete sequence Length = 305143 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 tcgcggtggtggcggcggac 148 |||||||||||||||||||| Sbjct: 8014 tcgcggtggtggcggcggac 7995
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcggtggtggcggcggacac 150 |||||||||||||||||||| Sbjct: 23410334 gcggtggtggcggcggacac 23410315 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccgccgccaccgccaacttc 343 |||||||||||||||||||| Sbjct: 10793984 ccgccgccaccgccaacttc 10793965
>gb|AC004313.1|AC004313 Drosophila melanogaster (P1 DS02368 (D205)) DNA sequence, complete sequence Length = 80993 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcgcggtggtggcggcggac 148 |||||||||||||||||||| Sbjct: 44657 tcgcggtggtggcggcggac 44676
>gb|U49839.1|MTU49839 Mycobacterium tuberculosis DES (des) gene, complete cds Length = 1384 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 307 caacatgccgctcagcaccgccgccacc 334 ||||||| ||||||||||||||||||| Sbjct: 81 caacatgttgctcagcaccgccgccacc 108
>gb|AF499741.1| Oryza sativa CaM-binding transcription factor (CBT) mRNA, complete cds Length = 3134 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 gcatcaaggagatcagactc 598 |||||||||||||||||||| Sbjct: 908 gcatcaaggagatcagactc 927
>emb|X71975.1|DMGCR101A D.melanogaster GCR 101 mRNA Length = 955 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tcgcggtggtggcggcggac 148 |||||||||||||||||||| Sbjct: 644 tcgcggtggtggcggcggac 663
>dbj|AB023580.1| Blastocystis hominis hsp70 mRNA, complete cds Length = 2021 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 tgccgctcagcaccgccgcc 331 |||||||||||||||||||| Sbjct: 1163 tgccgctcagcaccgccgcc 1144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,405,152 Number of Sequences: 3902068 Number of extensions: 4405152 Number of successful extensions: 107036 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 160 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101195 Number of HSP's gapped (non-prelim): 5837 length of query: 654 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 631 effective length of database: 17,143,297,704 effective search space: 10817420851224 effective search space used: 10817420851224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
