ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29o13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein 51 2e-06
2SGN1_YEAST (P40561) RNA-binding protein SGN1 50 4e-06
3GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A 48 1e-05
4NOP12_YARLI (Q6C2Q7) Nucleolar protein 12 48 1e-05
5YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4 47 3e-05
6YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12 47 3e-05
7PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-bin... 47 3e-05
8GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 47 3e-05
9GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu... 45 9e-05
10GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10 45 9e-05
11NOP12_CANGA (Q6FUS6) Nucleolar protein 12 45 1e-04
12NOP12_KLULA (Q6CKV6) Nucleolar protein 12 45 1e-04
13PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-bi... 44 3e-04
14PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-bi... 44 3e-04
15PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-bi... 44 3e-04
16GAR2_SCHPO (P41891) Protein gar2 44 3e-04
17GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment) 44 3e-04
18NOP12_ASHGO (Q75BJ7) Nucleolar protein 12 44 3e-04
19NOP12_YEAST (Q08208) Nucleolar protein 12 44 3e-04
20PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-... 44 3e-04
21RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p... 43 4e-04
22PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind... 43 4e-04
23PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi... 43 4e-04
24ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ... 43 4e-04
25NUCL_CHICK (P15771) Nucleolin (Protein C23) 43 6e-04
26HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ... 43 6e-04
27HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ... 43 6e-04
28HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hn... 43 6e-04
29GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro... 43 6e-04
30HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h... 43 6e-04
31NUCL_MOUSE (P09405) Nucleolin (Protein C23) 42 8e-04
32NUCL_RAT (P13383) Nucleolin (Protein C23) 42 8e-04
33NUCL_PONPY (Q5RF26) Nucleolin 42 8e-04
34ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ... 42 8e-04
35NUCL_MACFA (Q4R4J7) Nucleolin 42 8e-04
36NUCL_HUMAN (P19338) Nucleolin (Protein C23) 42 8e-04
37NUCL_MESAU (P08199) Nucleolin (Protein C23) 42 8e-04
38PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi... 42 0.001
39PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi... 42 0.001
40NUCL_XENLA (P20397) Nucleolin (Protein C23) 42 0.001
41PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi... 42 0.001
42GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon... 42 0.001
43RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro... 41 0.002
44RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p... 41 0.002
45PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g... 41 0.002
46RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ... 41 0.002
47PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 41 0.002
48RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He... 41 0.002
49RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ... 40 0.003
50RNP24_SCHPO (Q09100) RNA-binding protein rnp24 40 0.004
51RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C... 40 0.005
52RSD1_SCHPO (O13845) RNA-binding protein rsd1 40 0.005
53YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 i... 40 0.005
54RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co... 40 0.005
55MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing prote... 40 0.005
56PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi... 39 0.006
57DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1 39 0.006
58SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl... 39 0.008
59MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 39 0.011
60RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi) 38 0.014
61YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 i... 38 0.014
62ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur... 38 0.019
63RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin... 38 0.019
64RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h... 38 0.019
65MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing prote... 37 0.025
66MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote... 37 0.025
67MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156) 37 0.025
68MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2) 37 0.025
69ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ... 37 0.025
70SXL_CHRRU (O97018) Sex-lethal homolog 37 0.032
71NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO... 37 0.032
72IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 s... 37 0.032
73IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 s... 37 0.032
74DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp... 37 0.042
75DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp... 37 0.042
76DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp... 37 0.042
77DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding prote... 36 0.055
78DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding prote... 36 0.055
79SXL_MUSDO (O17310) Sex-lethal homolog 36 0.071
80NOP12_SCHPO (O13741) Nucleolar protein 12 36 0.071
81RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F... 36 0.071
82CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine... 35 0.093
83CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine... 35 0.093
84RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h... 35 0.093
85MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa... 35 0.12
86MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa... 35 0.12
87PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 35 0.12
88PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 35 0.12
89SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 35 0.12
90NSR1_YEAST (P27476) Nuclear localization sequence-binding protei... 35 0.12
91HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2... 35 0.12
92HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4... 35 0.16
93CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r... 34 0.21
94CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine... 34 0.21
95CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine... 34 0.21
96MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos... 34 0.21
97IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 R... 34 0.21
98ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1 34 0.27
99MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 34 0.27
100MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos... 34 0.27
101TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43) 34 0.27
102CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine... 33 0.35
103MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote... 33 0.35
104PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 33 0.46
105HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (... 33 0.46
106HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn... 33 0.46
107HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (... 33 0.60
108TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran... 33 0.60
109TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr... 33 0.60
110TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr... 33 0.60
111TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43) 33 0.60
112TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha) 32 0.79
113MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing prote... 32 0.79
114TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha) 32 0.79
115YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 ... 32 0.79
116MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote... 32 0.79
117RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho... 32 1.0
118SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli... 32 1.0
119SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp... 32 1.0
120SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp... 32 1.0
121SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp... 32 1.0
122SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp... 32 1.0
123HRP3_PLAFS (P14586) Histidine-rich protein 31 1.8
124FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protei... 31 1.8
125FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protei... 31 1.8
126MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing prote... 31 1.8
127RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS... 31 2.3
128RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2 31 2.3
129MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash... 31 2.3
130MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa... 31 2.3
131MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa... 31 2.3
132YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i... 31 2.3
133RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss... 31 2.3
134RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2 31 2.3
135AUA1_YEAST (P32450) Ammonia regulation of amino acid uptake protein 30 3.0
136SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35) 30 3.0
137RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1 30 3.0
138RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1 30 3.0
139RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1 30 3.0
140RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1 30 3.0
141RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1 30 3.0
142RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain... 30 3.0
143ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E... 30 3.9
144ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR) 30 3.9
145NOP12_NEUCR (Q7S2L7) Nucleolar protein 12 30 3.9
146ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type ... 30 3.9
147IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 9... 30 3.9
148HYPB_BRAJA (Q45257) Hydrogenase nickel incorporation protein hypB 30 5.1
149ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ... 30 5.1
150MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc tra... 30 5.1
151ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn... 29 6.7
152ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (... 29 6.7
153LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (L... 29 6.7
154ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (... 29 6.7
155ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (... 29 6.7
156HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor 29 6.7
157RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri... 29 6.7
158MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos... 29 6.7
159CWC2_ASPFU (Q4WU07) Pre-mRNA-splicing factor cwc2 29 8.7 
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           SL++ FS+ G+IT   +  D E G S+G  ++ F DE S   A+E ++G +L G N+ V 
Sbjct: 21  SLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVN 80

Query: 325 EAKPKG 342
           EA+ +G
Sbjct: 81  EAQSRG 86
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>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 21/67 (31%), Positives = 37/67 (55%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCN 312
           D     +++HF  CG+I R+++  D   G  KG  Y++F   +   KAL+L+G +L G  
Sbjct: 74  DVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQLNGGELKGKK 133

Query: 313 LYVAEAK 333
           + V+  +
Sbjct: 134 IAVSRKR 140
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>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           SL+  FS+ GE+    +  D E G S+G  ++ F DE S   A+E ++G DL G ++ V 
Sbjct: 23  SLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVN 82

Query: 325 EAKPKG 342
           EA+ +G
Sbjct: 83  EAQSRG 88
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>NOP12_YARLI (Q6C2Q7) Nucleolar protein 12|
          Length = 509

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 26/68 (38%), Positives = 37/68 (54%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VFV   D  +QE+    SL E FS CG++  V +  D +    KG AY+ F D +S  +A
Sbjct: 276 VFVGALDFEEQEE----SLWEAFSSCGDVEYVRIVRDPKTNVGKGFAYVQFKDVNSVEQA 331

Query: 277 LELSGSDL 300
           L L+G  +
Sbjct: 332 LLLNGKGI 339
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>YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4|
          Length = 237

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGS 294
           ++EHF  CG+I + ++P D      K  AY++F D SS   AL ++GS
Sbjct: 117 IEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGS 164
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>YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12|
          Length = 197

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGS 294
           ++EHF  CG I R ++P D      K  AY++F D SS   AL ++GS
Sbjct: 77  VEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGS 124
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>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (Poly(A)-binding protein II) (PABII)
          Length = 166

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDL 300
           LQ HF+ CG + RV++  D   G  KG AY++F++ S    AL L+GS L
Sbjct: 71  LQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSML 120
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>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           +L+  FS+ GE+    +  D E G S+G  ++ F DE S   A+E ++G DL G ++ V 
Sbjct: 23  ALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVN 82

Query: 325 EAKPKG 342
           EA+ +G
Sbjct: 83  EAQSRG 88
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>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           SL+  F+  GEI    V  D E G S+G  ++ F+ E+S   A+E ++G +L G N+ V 
Sbjct: 23  SLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVN 82

Query: 325 EAKPKG 342
           +A+ +G
Sbjct: 83  QAQSRG 88
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>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYV 321
           + L+  FS+ GE+    +  D E G S+G  ++ F DE S   A+ E++G +L G  + V
Sbjct: 20  AELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITV 79

Query: 322 AEAKPKG 342
            EA+ +G
Sbjct: 80  NEAQSRG 86
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>NOP12_CANGA (Q6FUS6) Nucleolar protein 12|
          Length = 396

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 27/79 (34%), Positives = 39/79 (49%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VFV   D  + E+    SL +HF  CG I  V +  D +    KG AY+ F +  S SKA
Sbjct: 230 VFVGNLDFEEDEE----SLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKA 285

Query: 277 LELSGSDLGGCNLYVAEAK 333
           L L+   +   N ++ + K
Sbjct: 286 LLLNEKPMISQNEHLKKRK 304
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>NOP12_KLULA (Q6CKV6) Nucleolar protein 12|
          Length = 524

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 26/63 (41%), Positives = 33/63 (52%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VFV   D  + E+    SL +HF  CG+I  V +  D +    KG AY+ F D  S SKA
Sbjct: 361 VFVGNLDFEEVEE----SLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDFQSVSKA 416

Query: 277 LEL 285
           L L
Sbjct: 417 LLL 419
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>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 301

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +1

Query: 136 AIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNL 315
           A    L+ HF  CG + RV++  D  +G  KG AY++F+D+ S   +L L  S   G  +
Sbjct: 178 ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI 237

Query: 316 YV 321
            V
Sbjct: 238 KV 239
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>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +1

Query: 136 AIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNL 315
           A    L+ HF  CG + RV++  D  +G  KG AY++F+D+ S   +L L  S   G  +
Sbjct: 182 ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI 241

Query: 316 YV 321
            V
Sbjct: 242 KV 243
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>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA-binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +1

Query: 136 AIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNL 315
           A    L+ HF  CG + RV++  D  +G  KG AY++F+D+ S   +L L  S   G  +
Sbjct: 182 ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQI 241

Query: 316 YV 321
            V
Sbjct: 242 KV 243
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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VFV     +  ED + ++    F  CG+I  + +P D ++G  KG  Y+ F+D  S  K 
Sbjct: 368 VFVGNLSFNATEDDLSTA----FGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKC 423

Query: 277 LELSGSDLGG 306
           +E++G  + G
Sbjct: 424 VEMNGHFIAG 433



 Score = 32.7 bits (73), Expect = 0.60
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGS 294
           L + F + G I    V MD ++G SKG  Y+DF    +   A+  +G+
Sbjct: 279 LGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGT 326
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>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           +SL   FS  GE+    + +D E   S+G  ++ F+ E +   A+E ++G +L G N+ V
Sbjct: 1   NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60

Query: 322 AEAKPKG 342
            EA+ +G
Sbjct: 61  NEAQSRG 67
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>NOP12_ASHGO (Q75BJ7) Nucleolar protein 12|
          Length = 426

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 25/64 (39%), Positives = 33/64 (51%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VFV   D  + E+    SL +HF  CG I  V +  D +    KG AY+ F D  S +KA
Sbjct: 261 VFVGNLDFEESEE----SLWKHFMSCGPIEYVRIVRDPKTNVGKGFAYVQFADLVSVNKA 316

Query: 277 LELS 288
           L L+
Sbjct: 317 LLLN 320
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>NOP12_YEAST (Q08208) Nucleolar protein 12|
          Length = 459

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 24/64 (37%), Positives = 34/64 (53%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV   D  + E+    SL +HF  CG+I  V +  D +    KG AY+ F D  S +KA
Sbjct: 281 IFVGNLDFEEIEE----SLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQFKDLQSVNKA 336

Query: 277 LELS 288
           L L+
Sbjct: 337 LLLN 340
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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           V++K F     ++     L+E F K G    V V  D +NG SKG  ++ F       KA
Sbjct: 193 VYIKNFGDDMNDER----LKEMFGKYGPALSVKVMTD-DNGKSKGFGFVSFERHEDAQKA 247

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G D+ G +++V  A+ K
Sbjct: 248 VDEMNGKDMNGKSMFVGRAQKK 269
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>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYVA 324
           S++++HF  CG I  V +  D   G  KG  Y+ F +  S   AL+L+ S+L G  L V 
Sbjct: 301 SAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM 360

Query: 325 EAKPK 339
            +  K
Sbjct: 361 RSVNK 365
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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           V++K F     ED     L+E F K G    V V  D E+G SKG  ++ F       KA
Sbjct: 193 VYIKNFG----EDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G +L G  +YV  A+ K
Sbjct: 248 VDEMNGKELNGKQIYVGRAQKK 269
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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           V++K F     ED     L+E F K G    V V  D E+G SKG  ++ F       KA
Sbjct: 193 VYIKNFG----EDMDDERLKELFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G +L G  +YV  A+ K
Sbjct: 248 VDEMNGKELNGKQIYVGRAQKK 269
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>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (CArG-binding factor-A) (CBF-A)
          Length = 285

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 23/81 (28%), Positives = 39/81 (48%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G +    E+ IR    E+F + GEI  + +P+D +    +G  ++ F +E    K 
Sbjct: 161 IFVGGLNPEATEEKIR----EYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKV 216

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
           LE     + G    +  A+PK
Sbjct: 217 LEKKFHTVSGSKCEIKVAQPK 237



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGG 306
           D  +  L+++F+K GE+   ++ MD   G S+G  ++ F D SS  K L+     L G
Sbjct: 85  DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDG 142
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>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCG-EITRVSVPMDHENGASKGIAYMDFTDESSFSK 273
           +FVK    ++  + +R++++E F K   +++ V +      G+SK   Y+DF       K
Sbjct: 283 LFVKNLTPTKDYEELRTAIKEFFGKKNLQVSEVRI------GSSKRFGYVDFLSAEDMDK 336

Query: 274 ALELSGSDLGGCNLYVAEAKPK 339
           AL+L+G  L G  + + +AK K
Sbjct: 337 ALQLNGKKLMGLEIKLEKAKSK 358



 Score = 38.5 bits (88), Expect = 0.011
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV+G      E+ +R S +   S         +  D + G+SKG  ++DF+       A
Sbjct: 555 LFVRGLSEDTTEETLRESFEGSIS-------ARIVTDRDTGSSKGFGFVDFSSPEDAKAA 607

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 608 KEAMEDGEIDGNKVTLDFAKPKGE 631



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 208 HENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYVAEAKPKGQ 345
           ++ G+SKG+AY++F  E+   KAL E  G+++ G  + +     K Q
Sbjct: 402 NKEGSSKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQ 448
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>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G      E+ IR    E+F   GE+  + +PMD++    +G  ++ F +E    K 
Sbjct: 184 IFVGGLSPDTPEEKIR----EYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 239

Query: 277 LELSGSDLG--GCNLYVAEAKPKGQ 345
           +E    ++G   C + VA +K + Q
Sbjct: 240 MEKKYHNVGLSKCEIKVAMSKEQYQ 264



 Score = 37.0 bits (84), Expect = 0.032
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGG 306
           D  +  L+++FSK GE+   ++ +D   G S+G  ++ F +  S  K ++     L G
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNG 164
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>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G      E+ IR    E+F   GE+  + +PMD++    +G  ++ F +E    K 
Sbjct: 184 IFVGGLSPDTPEEKIR----EYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 239

Query: 277 LELSGSDLG--GCNLYVAEAKPKGQ 345
           +E    ++G   C + VA +K + Q
Sbjct: 240 MEKKYHNVGLSKCEIKVAMSKEQYQ 264



 Score = 37.0 bits (84), Expect = 0.032
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGG 306
           D  +  L+++FSK GE+   ++ +D   G S+G  ++ F +  S  K ++     L G
Sbjct: 107 DTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNG 164
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>HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hnRNP C) (hnRNP|
           core protein C) (Fragment)
          Length = 158

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G      E+ IR    E+F   GE+  + +PMD++    +G  ++ F +E    K 
Sbjct: 36  IFVGGLSPDTPEEKIR----EYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 91

Query: 277 LELSGSDLG--GCNLYVAEAKPKGQ 345
           +E    ++G   C + VA +K + Q
Sbjct: 92  MEKKYHNVGLSKCEIKVAMSKEQYQ 116
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>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYVAE 327
           LQ  FS+ G++    +  D E+G S+G  ++ F DE +   A+ E++G +L G  + V E
Sbjct: 22  LQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNE 81

Query: 328 AKPKG 342
           A+ +G
Sbjct: 82  AQSRG 86
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>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 353

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G      E+ IR    E+F   GE+  + +PMD++    +G  ++ F +E    K 
Sbjct: 182 IFVGGLSPDTPEEKIR----EYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 237

Query: 277 LELSGSDLG--GCNLYVAEAKPKGQ 345
           +E    ++G   C + VA +K + Q
Sbjct: 238 MEKKYHNVGLSKCEIKVAMSKEQYQ 262



 Score = 35.8 bits (81), Expect = 0.071
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGG 306
           D  +  L+++FSK G++   ++ +D   G S+G  ++ F +  S  K ++     L G
Sbjct: 105 DTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNG 162
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>NUCL_MOUSE (P09405) Nucleolin (Protein C23)|
          Length = 706

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVKG      E+ ++ S +      G + R  +  D E G+SKG  ++DF  E     A
Sbjct: 570 LFVKGLSEDTTEETLKESFE------GSV-RARIVTDRETGSSKGFGFVDFNSEEDAKAA 622

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 623 KEAMEDGEIDGNKVTLDWAKPKGE 646



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYVAE 327
           L+E F    EI  VS     ++G SKGIAY++F  E+   K L E  G+++ G ++ +  
Sbjct: 410 LKEVFEDAMEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY 464

Query: 328 AKPKGQ 345
              KGQ
Sbjct: 465 TGEKGQ 470



 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/83 (25%), Positives = 42/83 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+   + ++  + ++ ++ E F+K  ++  V V      G ++   Y+DF       KA
Sbjct: 310 LFIGNLNPNKSVNELKFAISELFAK-NDLAVVDV----RTGTNRKFGYVDFESAEDLEKA 364

Query: 277 LELSGSDLGGCNLYVAEAKPKGQ 345
           LEL+G  + G  + +   KPKG+
Sbjct: 365 LELTGLKVFGNEIKL--EKPKGR 385
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>NUCL_RAT (P13383) Nucleolin (Protein C23)|
          Length = 712

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVKG      E+ ++ S +      G + R  +  D E G+SKG  ++DF  E     A
Sbjct: 576 LFVKGLSEDTTEETLKESFE------GSV-RARIVTDRETGSSKGFGFVDFNSEEDAKAA 628

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 629 KEAMEDGEIDGNKVTLDWAKPKGE 652



 Score = 34.7 bits (78), Expect = 0.16
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYVAE 327
           L+E F    EI  VS     ++G SKGIAY++F  E+   K L E  G+++ G ++ +  
Sbjct: 412 LKEVFEDAVEIRLVS-----QDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY 466

Query: 328 AKPKGQ 345
              KGQ
Sbjct: 467 TGEKGQ 472



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+   + ++    ++ ++ E F+K  ++  V V      G ++   Y+DF       KA
Sbjct: 312 LFIGNLNPNKSVAELKVAISELFAK-NDLAAVDV----RTGTNRKFGYVDFESAEDLEKA 366

Query: 277 LELSGSDLGGCNLYVAEAKPKGQ 345
           LEL+G  + G  + +   KPKG+
Sbjct: 367 LELTGLKVFGNEIKL--EKPKGR 387
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>NUCL_PONPY (Q5RF26) Nucleolin|
          Length = 711

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVKG      ED    +L+E F   G + R  +  D E G+SKG  ++DF  E     A
Sbjct: 575 LFVKGLS----EDTTEETLKESFD--GSV-RARIVTDRETGSSKGFGFVDFNSEEDAKAA 627

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 628 KEAMEDGEIDGNKVTLDWAKPKGE 651



 Score = 37.7 bits (86), Expect = 0.019
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
 Frame = +1

Query: 106 KGFDSSQQEDA------------IRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF 249
           KG DS ++ DA             +  L+E F    EI  VS     ++G SKGIAY++F
Sbjct: 383 KGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEF 437

Query: 250 TDESSFSKAL-ELSGSDLGGCNLYVAEAKPKGQ 345
             E+   K   E  G+++ G ++ +     KGQ
Sbjct: 438 KTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 470



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/83 (25%), Positives = 42/83 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV   + ++    +++ + + F+K  ++  V V +    G ++   Y+DF       KA
Sbjct: 310 LFVGNLNFNKSAPELKTGISDVFAK-NDLAVVDVRI----GMTRKFGYVDFESAEDLEKA 364

Query: 277 LELSGSDLGGCNLYVAEAKPKGQ 345
           LEL+G  + G  + +   KPKG+
Sbjct: 365 LELTGLKVFGNEIKL--EKPKGK 385



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/65 (36%), Positives = 33/65 (50%)
 Frame = +1

Query: 118 SSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSD 297
           S+    A   +LQE F K    T + VP + +NG SKG A+++F   +SF  A E     
Sbjct: 492 SNLSYSATEETLQEVFEKA---TFIKVPQN-QNGKSKGYAFIEF---ASFEDAKEA---- 540

Query: 298 LGGCN 312
           L  CN
Sbjct: 541 LNSCN 545
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>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)|
           (APOBEC-1-binding protein 1) (ABBP-1)
          Length = 331

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 22/81 (27%), Positives = 38/81 (46%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G +    E      ++E+F + GEI  + +PMD +    +G  ++ F +E    K 
Sbjct: 154 IFVGGLNP---ESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKV 210

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
           LE     + G    +  A+PK
Sbjct: 211 LEKKFHTVSGSKCEIKVAQPK 231



 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGG 306
           D  +  L+++F+K GE+   ++ MD   G S+G  ++ F D +S  K L+     L G
Sbjct: 78  DTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRLDG 135
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>NUCL_MACFA (Q4R4J7) Nucleolin|
          Length = 710

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVKG      ED    +L+E F   G + R  +  D E G+SKG  ++DF  E     A
Sbjct: 574 LFVKGLS----EDTTEETLKESFD--GSV-RARIVTDRETGSSKGFGFVDFNSEEDAKAA 626

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 627 KEAMEDGEIDGNKVTLDWAKPKGE 650



 Score = 37.7 bits (86), Expect = 0.019
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
 Frame = +1

Query: 106 KGFDSSQQEDA------------IRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF 249
           KG DS ++ DA             +  L+E F    EI  VS     ++G SKGIAY++F
Sbjct: 382 KGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEF 436

Query: 250 TDESSFSKAL-ELSGSDLGGCNLYVAEAKPKGQ 345
             E+   K   E  G+++ G ++ +     KGQ
Sbjct: 437 KTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 469



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/83 (25%), Positives = 42/83 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV   + ++    +++ + + F+K  ++  V V +    G ++   Y+DF       KA
Sbjct: 309 LFVGNLNFNKSAPELKTGISDVFAK-NDLAVVDVRI----GMTRKFGYVDFESAEDLEKA 363

Query: 277 LELSGSDLGGCNLYVAEAKPKGQ 345
           LEL+G  + G  + +   KPKG+
Sbjct: 364 LELTGLKVFGNEIKL--EKPKGK 384



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/65 (36%), Positives = 33/65 (50%)
 Frame = +1

Query: 118 SSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSD 297
           S+    A   +LQE F K    T + VP + +NG SKG A+++F   +SF  A E     
Sbjct: 491 SNLSYSATEETLQEVFEKA---TFIKVPQN-QNGKSKGYAFIEF---ASFEDAKEA---- 539

Query: 298 LGGCN 312
           L  CN
Sbjct: 540 LNSCN 544
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>NUCL_HUMAN (P19338) Nucleolin (Protein C23)|
          Length = 709

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVKG      ED    +L+E F   G + R  +  D E G+SKG  ++DF  E     A
Sbjct: 573 LFVKGLS----EDTTEETLKESFD--GSV-RARIVTDRETGSSKGFGFVDFNSEEDAKAA 625

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 626 KEAMEDGEIDGNKVTLDWAKPKGE 649



 Score = 37.7 bits (86), Expect = 0.019
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
 Frame = +1

Query: 106 KGFDSSQQEDA------------IRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF 249
           KG DS ++ DA             +  L+E F    EI  VS     ++G SKGIAY++F
Sbjct: 381 KGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVS-----KDGKSKGIAYIEF 435

Query: 250 TDESSFSKAL-ELSGSDLGGCNLYVAEAKPKGQ 345
             E+   K   E  G+++ G ++ +     KGQ
Sbjct: 436 KTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQ 468



 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/83 (25%), Positives = 42/83 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV   + ++    +++ + + F+K  ++  V V +    G ++   Y+DF       KA
Sbjct: 308 LFVGNLNFNKSAPELKTGISDVFAK-NDLAVVDVRI----GMTRKFGYVDFESAEDLEKA 362

Query: 277 LELSGSDLGGCNLYVAEAKPKGQ 345
           LEL+G  + G  + +   KPKG+
Sbjct: 363 LELTGLKVFGNEIKL--EKPKGK 383



 Score = 30.4 bits (67), Expect = 3.0
 Identities = 24/65 (36%), Positives = 33/65 (50%)
 Frame = +1

Query: 118 SSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSD 297
           S+    A   +LQE F K    T + VP + +NG SKG A+++F   +SF  A E     
Sbjct: 490 SNLSYSATEETLQEVFEKA---TFIKVPQN-QNGKSKGYAFIEF---ASFEDAKEA---- 538

Query: 298 LGGCN 312
           L  CN
Sbjct: 539 LNSCN 543
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>NUCL_MESAU (P08199) Nucleolin (Protein C23)|
          Length = 713

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVKG      E+ ++ S +      G + R  +  D E G+SKG  ++DF  E     A
Sbjct: 573 LFVKGLSEDTTEETLKESFE------GSV-RARIVTDRETGSSKGFGFVDFNSEEDAKAA 625

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
            E +   ++ G  + +  AKPKG+
Sbjct: 626 KEAMEDGEIDGNKVTLDWAKPKGE 649



 Score = 34.3 bits (77), Expect = 0.21
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYVAE 327
           L+E F    EI  VS     ++G SKGIAY++F  E+   K L E  G+++ G ++ +  
Sbjct: 409 LKEVFEDALEIRLVS-----QDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY 463

Query: 328 AKPKGQ 345
              KGQ
Sbjct: 464 TGEKGQ 469



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+   + ++    ++ ++ E F+K  ++  V V      G ++   Y+DF       KA
Sbjct: 309 LFIGNLNPNKSVAELKVAISEPFAK-NDLAVVDV----RTGTNRKFGYVDFESAEDLEKA 363

Query: 277 LELSGSDLGGCNLYVAEAKPKGQ 345
           LEL+G  + G  + +   KPKG+
Sbjct: 364 LELTGLKVFGNEIKL--EKPKGR 384
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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           V++K F     ED     L++ F K G    V V  D E+G SKG  ++ F       KA
Sbjct: 193 VYIKNFG----EDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G +L G  +YV  A+ K
Sbjct: 248 VDEMNGKELNGKQIYVGRAQKK 269
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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           V++K F     ED     L++ F K G    V V  D E+G SKG  ++ F       KA
Sbjct: 193 VYIKNFG----EDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G +L G  +YV  A+ K
Sbjct: 248 VDEMNGKELNGKQIYVGRAQKK 269
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>NUCL_XENLA (P20397) Nucleolin (Protein C23)|
          Length = 650

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 23/78 (29%), Positives = 42/78 (53%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+   +S+++ D ++ +L+E FSK     +     D   G SK   Y+DF+ E    KA
Sbjct: 234 IFIGNLNSTKEFDELKDALREFFSK-----KNLTIQDIRIGNSKKFGYVDFSSEEEVEKA 288

Query: 277 LELSGSDLGGCNLYVAEA 330
           L+L+G  + G  + + +A
Sbjct: 289 LKLTGKKILGTEVKIEKA 306



 Score = 36.2 bits (82), Expect = 0.055
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYVAE 327
           LQE F    +I R+    D   G++KGIAY++F++E   +KAL E  G+++ G +++V  
Sbjct: 340 LQEIFENAKDI-RIPTGKD---GSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDF 395

Query: 328 AKPKGQ 345
              K Q
Sbjct: 396 TGEKSQ 401



 Score = 35.8 bits (81), Expect = 0.071
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV+G      ED    +L+E F   G +    +  D + GASKG  ++DF+       A
Sbjct: 504 LFVRGLS----EDTTEETLKEAFD--GSVN-ARIVTDRDTGASKGFGFVDFSTAEDAKAA 556

Query: 277 LE-LSGSDLGGCNLYVAEAKPKG 342
            E +   ++ G  + +  AKPKG
Sbjct: 557 KEAMEDGEIDGNKVTLDFAKPKG 579
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>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           V++K F     ED     L++ F K G    V V  D E+G SKG  ++ F       KA
Sbjct: 193 VYIKNFG----EDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKA 247

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G +L G  +YV  A+ K
Sbjct: 248 VDEMNGKELNGKQIYVGRAQKK 269
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>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYV 321
           +SL++ F+  G++    V +D E G S+G  +++F DE + + A+ E+ G +L G ++ V
Sbjct: 49  ASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRV 108

Query: 322 AEAKPK 339
             A  +
Sbjct: 109 NPANDR 114
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>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYVA 324
           S+L+EHF  CG I  V +  +   G  +G  Y+ F +  +   AL+L+ S+L G  L V 
Sbjct: 299 SALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVM 358

Query: 325 EAKPK 339
            +  K
Sbjct: 359 RSVNK 363
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>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYVA 324
           S+L+EHF  CG I  V +  +   G  +G  Y+ F +  +   AL+L+ S+L G  L V 
Sbjct: 305 SALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVM 364

Query: 325 EAKPK 339
            +  K
Sbjct: 365 RSVNK 369
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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF-TDESSFSK 273
           ++VK  + +  E+ +R    +HFS+CG IT   +  D E G SKG  ++ F T E +   
Sbjct: 306 IYVKNVNVAVTEEELR----KHFSQCGTITSTKLMCD-EKGKSKGFGFVCFSTPEEAIDA 360

Query: 274 ALELSGSDLGGCNLYVAEAKPK 339
                G    G  LYVA A+ K
Sbjct: 361 VKTFHGQMFHGKPLYVAIAQKK 382



 Score = 28.9 bits (63), Expect = 8.7
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VFVK       E    + LQ+ F K G I    V    E+G S+G  ++ F  E +   A
Sbjct: 114 VFVKNLP----ESVTNAVLQDMFKKFGNIVSCKVAT-LEDGKSRGYGFVQFEQEDAAHAA 168

Query: 277 LE-LSGSDLGGCNLYVAEAKPK 339
           ++ L+ + +    +YV +   K
Sbjct: 169 IQTLNSTIVADKEIYVGKFMKK 190
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>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G + +  E A    L++HFS  G I+ V V  D E   S+G  ++ FT+    S A
Sbjct: 8   LFVGGLNFNTDEQA----LEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDA 63

Query: 277 LE-LSGSDLGGCNLYVAEA 330
           +  ++G  L G  + V  A
Sbjct: 64  MRAMNGESLDGRQIRVDHA 82
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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FVK  D S  ++     L+E F+  G IT   V M  ENG SKG  ++ F+     +KA
Sbjct: 323 LFVKNLDDSVDDE----KLEEEFAPYGTITSAKV-MRTENGKSKGFGFVCFSTPEEATKA 377

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E +   + G  LYVA A+ K
Sbjct: 378 ITEKNQQIVAGKPLYVAIAQRK 399



 Score = 38.5 bits (88), Expect = 0.011
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +1

Query: 112 FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LS 288
           F  +   D    +L + FS  G+I    +  D ENG SKG  ++ F +E +  +A++ L+
Sbjct: 128 FIKNLHPDIDNKALYDTFSVFGDILSSKIATD-ENGKSKGFGFVHFEEEGAAKEAIDALN 186

Query: 289 GSDLGGCNLYVA 324
           G  L G  +YVA
Sbjct: 187 GMLLNGQEIYVA 198



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           L + FS  G ++ + V  D     S G AY++F D  +  KA+E
Sbjct: 53  LYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 96
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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 22/57 (38%), Positives = 33/57 (57%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYV 321
           L+E FS  G++  V +  D  +  SKGIAY++F D SS   A+ L+G  + G  + V
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIV 225



 Score = 38.1 bits (87), Expect = 0.014
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 163 FSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           F   G I  + + MD E G SKG  ++ F+D     KALE L+G +L G
Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG 318
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>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G + +  E A    L++HFS  G I+ V V  D E   S+G  ++ FT+    S A
Sbjct: 8   LFVGGLNFNTDEQA----LEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVA 63

Query: 277 LE-LSGSDLGGCNLYVAEA 330
           +  ++G  L G  + V  A
Sbjct: 64  MRAMNGESLDGRQIRVDHA 82
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>RNP24_SCHPO (Q09100) RNA-binding protein rnp24|
          Length = 369

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALEL 285
           + L+EHF + G+I RV +    + G  KG  ++DF D  +  KA+EL
Sbjct: 242 ADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAMEL 288



 Score = 37.4 bits (85), Expect = 0.025
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 178 EITRVSVPMDHENG-ASKGIAYMDFTDESSFSKALELSGSDLGGCNLYV 321
           +ITR+ +PM  E    +KG AY+DF  E +   AL+ S   L G N+ +
Sbjct: 148 QITRIHMPMSKEKRFQNKGFAYVDFATEDALKLALQCSEKALNGRNILI 196
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>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/81 (27%), Positives = 41/81 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VF+ G  S+  E  +R+     F++ G++T V +  D E   S+G  ++ F +ESS    
Sbjct: 98  VFLGGLPSNVTETDLRT----FFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHV 153

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
                 +L G  + + +A+P+
Sbjct: 154 TNERYINLNGKQVEIKKAEPR 174



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/69 (21%), Positives = 33/69 (47%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCN 312
           +  + +L  +F + G+I    V  ++E+G S+G  ++ F D ++ +  L+     L G  
Sbjct: 17  ETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQNGPHTLDGRT 76

Query: 313 LYVAEAKPK 339
           +      P+
Sbjct: 77  IDPKPCNPR 85
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>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/57 (35%), Positives = 30/57 (52%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYV 321
           L + F + G +    +  D  +G SKG+AY++F  E S   A+ LSG  L G  + V
Sbjct: 256 LYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSGKRLLGLPVIV 312
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>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I|
          Length = 297

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G  S  QED     LQ+ FSK G +T V +  +    AS+G  ++ F+     + A
Sbjct: 103 LFVSGIASRMQED----ELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSA 158

Query: 277 LE-LSGSDLGGCNLYVAEAK 333
           ++ L+  +  G  L V +AK
Sbjct: 159 IDNLNSQEFYGRVLNVQKAK 178
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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYV 321
           L+E FS  G++  V +  D  +  S+GIAY++F D SS   A+ L+G  + G  + V
Sbjct: 169 LEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIGLTGQRVLGVPIIV 225



 Score = 38.1 bits (87), Expect = 0.014
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 163 FSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           F   G I  + + MD E G SKG  ++ F+D     KALE L+G +L G
Sbjct: 270 FEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAG 318
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>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1|
          Length = 833

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F++    S  ED ++S     F   G++ +V +P+D +    KG AY+DF D     +A
Sbjct: 325 LFLRNLTYSCAEDDLKSL----FGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRA 380

Query: 277 -LELSGSDLGGCNLYVAEAKPK 339
            LEL      G  L+V  AK +
Sbjct: 381 YLELDAKPFQGRLLHVLPAKAR 402
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>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +++K  D +  ++ +R    + FS  G IT   V +  E+G SKG  ++ F+     +KA
Sbjct: 296 LYIKNLDDTIDDEKLR----KEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKA 349

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
           + E++G  +G   LYVA A+ K
Sbjct: 350 VTEMNGRIVGSKPLYVALAQRK 371
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>DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1|
          Length = 476

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE------LSGSDLGG 306
           S L+EHFS  G+I  + V  D     SKGIA++ F   S   +A+E      L  +D   
Sbjct: 39  SVLREHFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKP 98

Query: 307 CNLYVAEAKPKG 342
             +++A+++  G
Sbjct: 99  IKVFIAQSRSSG 110



 Score = 29.6 bits (65), Expect = 5.1
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV    S  +ED     L+E F   G+I   SV  +   G SKG+ Y+ +   S  ++A
Sbjct: 123 IFVMIPKSYTEED-----LREKFKVYGDIEYCSVIKNKVTGESKGLGYVRYLKPSQAAQA 177

Query: 277 LE 282
           +E
Sbjct: 178 IE 179
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>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSK 273
           +     L++HF K GEI  ++V  D + G S+G A++ FT+  +  K
Sbjct: 66  ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112
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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGC 309
           DA  S L+  FSK G+I  + V  D  +  SKG AY+ + +  +  +A  EL G    G 
Sbjct: 311 DASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKELDGKHFQGR 370

Query: 310 NLYVAEAKPK 339
            +++  A  K
Sbjct: 371 LMHILPATAK 380
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>RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi)|
          Length = 165

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +1

Query: 112 FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF-TDESSFSKALELS 288
           F +S  E+A    +QE F   GEI  + + +D   G SKG A +++ T + + +    L+
Sbjct: 76  FVTSIHEEAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALN 135

Query: 289 GSDLGGCNLYVAEAKPKG 342
           G+++ G  + V     KG
Sbjct: 136 GAEIMGQTIQVDWCFVKG 153
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>YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 403

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           D     L++HF  CG+I ++ +    ++G  KG A++DF +E   +  L+
Sbjct: 249 DVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNELK 298



 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
 Frame = +1

Query: 178 EITRVSVPMDHENGAS----KGIAYMDFTDESSFSKALELSGSDLGGCNLYVAEAK 333
           +ITR+S+P      ++    KG  YM F +       LELS S L G N+ + +++
Sbjct: 163 DITRLSMPRVAAKNSNAMKNKGFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSE 218
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>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGGCNLYV-- 321
           L++ FS+ G++    V  D E+G S+G  ++  + E+  S+A+  L G  L G  + V  
Sbjct: 207 LEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNA 266

Query: 322 AEAKPK 339
           AE +P+
Sbjct: 267 AEERPR 272
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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYV 321
           L++ FS  G++  V +  D  +  SKGIAY++F +  S   A+ L+G  L G  + V
Sbjct: 182 LEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIV 238



 Score = 33.1 bits (74), Expect = 0.46
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 163 FSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           F   G+I  + +  D + G SKG  ++ F+D     +ALE L+G +L G
Sbjct: 283 FEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAG 331
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>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 21/78 (26%), Positives = 36/78 (46%)
 Frame = +1

Query: 106 KGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALEL 285
           K F    +ED     L+E+F + G+I  + +  D ++G  +G A++ F D     K +  
Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQ 160

Query: 286 SGSDLGGCNLYVAEAKPK 339
               + G N  V +A  K
Sbjct: 161 KYHTINGHNAEVRKALSK 178
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>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1|
          Length = 827

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 24/81 (29%), Positives = 40/81 (49%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F++    +  ED +R    EHF+K G +  V VP+D   G SKG A + +   +S   A
Sbjct: 310 LFLRNLSYTVTEDDVR----EHFAKFGILVEVHVPLD-SKGHSKGFAMIRYEKPASALAA 364

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
            +  G+   G  +++  A  K
Sbjct: 365 FQTDGTVFQGRIVHILPAAAK 385
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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTD-ESSFSKALELSGSDLGGC 309
           DA     ++ FS  GE+  V V +D   G SKG AY+ F D E + +  +EL      G 
Sbjct: 311 DATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIELDKQIFQGR 370

Query: 310 NLYVAEAKPK 339
            L++  A  K
Sbjct: 371 LLHILPADAK 380
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>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)|
          Length = 600

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VF+       +  AI+  ++E   K GE+T V +  D E G S+G   ++F DE    KA
Sbjct: 102 VFISNIPYDMKWQAIKDLMRE---KVGEVTYVELFKDAE-GKSRGCGVVEFKDEEFVKKA 157

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
           LE ++  DL G  L + E  P G+
Sbjct: 158 LETMNKYDLSGRPLNIKE-DPDGE 180



 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALEL 285
           D     L+E FS+CG +    + M  ENG SKG   + F    S  KA  +
Sbjct: 533 DLTWQKLKEKFSQCGHVMFAEIKM--ENGKSKGCGTVRFDSPESAEKACRI 581
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>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)|
          Length = 591

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           VF+       +  AI+  ++E   K GE+T V +  D E G S+G   ++F DE    KA
Sbjct: 93  VFISNIPYDMKWQAIKDLMRE---KVGEVTYVELFKDAE-GKSRGCGVVEFKDEEFVKKA 148

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
           LE ++  DL G  L + E  P G+
Sbjct: 149 LETMNKYDLSGRPLNIKE-DPDGE 171



 Score = 32.3 bits (72), Expect = 0.79
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALEL 285
           D     L+E FS+CG +    + M  ENG SKG   + F    S  KA  +
Sbjct: 524 DLTWQKLKEKFSQCGHVMFAEIKM--ENGKSKGCGTVRFESAESAEKACRI 572
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>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 37.4 bits (85), Expect = 0.025
 Identities = 22/81 (27%), Positives = 37/81 (45%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G     +ED +R    E+F + G+I  + +  D  +G  +G A++ F D  S  K 
Sbjct: 107 IFVGGIKEDTEEDHLR----EYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
           +      +   N  V +A  K
Sbjct: 163 VIQKYHTVNNHNSQVRKALSK 183
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>SXL_CHRRU (O97018) Sex-lethal homolog|
          Length = 307

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 130 EDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +D     L   F  CG I    +  D++ G S G A++DF  E     A++ L+G  +  
Sbjct: 94  QDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRN 153

Query: 307 CNLYVAEAKPKGQ 345
             L V+ A+P G+
Sbjct: 154 KRLKVSYARPGGE 166
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>NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NOP77)|
          Length = 685

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           DA   SL  HFSK G +      +D   G +KG A++ F D+ ++++ ++
Sbjct: 300 DATEESLAPHFSKFGSVKYALPVIDKSTGLAKGTAFVAFKDQYTYNECIK 349
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>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 130 EDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           ED   + LQE F   G I+R+ +  D   G SKG A++ F      ++A+  +SG     
Sbjct: 248 EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 307

Query: 307 CNLYVAEAKP 336
             L V  AKP
Sbjct: 308 LILNVEWAKP 317
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>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 130 EDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           ED   + LQE F   G I+R+ +  D   G SKG A++ F      ++A+  +SG     
Sbjct: 248 EDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSGFGYDH 307

Query: 307 CNLYVAEAKP 336
             L V  AKP
Sbjct: 308 LILNVEWAKP 317
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>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G D S  ++ +RS    +FS+ GE+    +  D     S+G  ++ F D +     
Sbjct: 12  LFVGGLDWSTTQETLRS----YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 277 LELSGSDLGGCNLYVAEAKPKG 342
           L      L G N+      P+G
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRG 89
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>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G D S  ++ +RS    +FS+ GE+    +  D     S+G  ++ F D +     
Sbjct: 12  LFVGGLDWSTTQETLRS----YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 277 LELSGSDLGGCNLYVAEAKPKG 342
           L      L G N+      P+G
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRG 89
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>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G D S  ++ +RS    +FS+ GE+    +  D     S+G  ++ F D +     
Sbjct: 12  LFVGGLDWSTTQETLRS----YFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 277 LELSGSDLGGCNLYVAEAKPKG 342
           L      L G N+      P+G
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRG 89
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>DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE------LSGSDLGGCN 312
           L+E FS  G+I  + V  D     SKG+A++ F   S   +A+E      L  SD     
Sbjct: 41  LRERFSPFGDIQDIWVVRDKHTKESKGVAFVKFARSSQACRAMEEMHGQCLGPSDTKPIK 100

Query: 313 LYVAEAKPKG 342
           +++A+++  G
Sbjct: 101 VFIAQSRSSG 110



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV    S  +ED     L+E F   G+I   S+  +   G SKG+ Y+ +   S  ++A
Sbjct: 123 IFVMIPKSYTEED-----LREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQA 177

Query: 277 LE 282
           +E
Sbjct: 178 IE 179
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>DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding protein 1 (RB-1)|
          Length = 476

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE------LSGSDLGG 306
           S L+E FS  G+I  + V  D     SKGIA++ F   S   +A+E      L  +D   
Sbjct: 39  SVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKP 98

Query: 307 CNLYVAEAKPKG 342
             +++A+++  G
Sbjct: 99  IKVFIAQSRSSG 110



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV    S  +ED     L+E F   G+I   S+  +   G SKG+ Y+ +   S  ++A
Sbjct: 123 IFVMIPKSYTEED-----LREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLKPSQAAQA 177

Query: 277 LE 282
           +E
Sbjct: 178 IE 179
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>SXL_MUSDO (O17310) Sex-lethal homolog|
          Length = 324

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = +1

Query: 130 EDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +D     L   F  CG I    +  D++ G S G A++DF  E     A++ ++G  +  
Sbjct: 111 QDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRN 170

Query: 307 CNLYVAEAKPKGQ 345
             L V+ A+P G+
Sbjct: 171 KRLKVSYARPGGE 183
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>NOP12_SCHPO (O13741) Nucleolar protein 12|
          Length = 438

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDL-GGC 309
           +A    L  +F  CG I  V +  D +    KG AY+ F D     KAL L+   +  G 
Sbjct: 280 EAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKDTMGVDKALLLNEKKMPEGR 339

Query: 310 NLYVAEAK 333
            L +  AK
Sbjct: 340 TLRIMRAK 347
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>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1|
           protein) (Protein P11)
          Length = 385

 Score = 35.8 bits (81), Expect = 0.071
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G      E+ +R    E+F   G+I  V++  D + G  +G A+++F D     K 
Sbjct: 117 LFVGGLRDDHDEECLR----EYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 172

Query: 277 L 279
           +
Sbjct: 173 I 173



 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/81 (22%), Positives = 33/81 (40%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+ G D    +D +++    HF K G I  V V  D +   S+G  ++ ++       A
Sbjct: 26  LFIGGLDYRTTDDGLKA----HFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA 81

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
                  + G  +    A P+
Sbjct: 82  QNARPHKIDGRTVEPKRAVPR 102
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>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.093
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +1

Query: 97  VFVKG--FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTD-ESSF 267
           +FV G  FD+++Q      SL++ FSK G+I+ V V  D E   S+G  ++ F + + + 
Sbjct: 8   LFVGGLSFDTNEQ------SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 268 SKALELSGSDLGGCNLYVAEA 330
              + ++G  + G  + V +A
Sbjct: 62  DAMMAMNGKSVDGRQIRVDQA 82
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>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 35.4 bits (80), Expect = 0.093
 Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +1

Query: 97  VFVKG--FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTD-ESSF 267
           +FV G  FD+++Q      SL++ FSK G+I+ V V  D E   S+G  ++ F + + + 
Sbjct: 8   LFVGGLSFDTNEQ------SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 268 SKALELSGSDLGGCNLYVAEA 330
              + ++G  + G  + V +A
Sbjct: 62  DAMMAMNGKSVDGRQIRVDQA 82
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>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 35.4 bits (80), Expect = 0.093
 Identities = 20/78 (25%), Positives = 34/78 (43%)
 Frame = +1

Query: 106 KGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALEL 285
           K F    +ED     L+E+F + G+I    +  D ++G  +G  ++ F D     K +  
Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQ 160

Query: 286 SGSDLGGCNLYVAEAKPK 339
               + G N  V +A  K
Sbjct: 161 KYHTINGHNAEVRKALSK 178
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>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-----ELSGSDLGGCN 312
           SL+++FSK GEI    V  D     S+G  ++ F D +S  K L     EL    +    
Sbjct: 36  SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKV 95

Query: 313 LYVAEAKPK 339
            +   A+PK
Sbjct: 96  AFPRRAQPK 104
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>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-----ELSGSDLGGCN 312
           SL+++FSK GEI    V  D     S+G  ++ F D +S  K L     EL    +    
Sbjct: 36  SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKV 95

Query: 313 LYVAEAKPK 339
            +   A+PK
Sbjct: 96  AFPRRAQPK 104
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>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVAE 327
           L   F   G+IT + +P+D+E    +G A+++F      + A++ ++ S+L G  + V  
Sbjct: 22  LHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNL 81

Query: 328 AKP 336
           AKP
Sbjct: 82  AKP 84
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>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVAE 327
           L   F   G+IT + +P+D+E    +G A+++F      + A++ ++ S+L G  + V  
Sbjct: 22  LHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNL 81

Query: 328 AKP 336
           AKP
Sbjct: 82  AKP 84
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>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3|
          Length = 388

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 181 ITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYVAEAKPK 339
           +T + + +D     S+G  Y++F    + S AL LSG DL G  + +  A+P+
Sbjct: 118 VTSIRLVIDPLTERSRGFGYVEFETADTLSAALALSGEDLMGRPVRITVAEPR 170
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>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           +A R ++ E F+K GE+  V +P   E    KG  Y+ F++     KAL+
Sbjct: 277 NADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALD 326



 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL-ELSGSDLGG--CNLYV 321
           L++ F   G +    V  +     S+G  Y+DF ++S   KA+ E+ G ++ G   N  +
Sbjct: 184 LKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDM 243

Query: 322 AEAKPKG 342
           + +KP G
Sbjct: 244 STSKPAG 250
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>HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2 (Fragment)|
          Length = 225

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDE 258
           +FV G      E+ IR    E+F   GE+  + +PMD++    +G  ++ F  E
Sbjct: 174 IFVGGLSPDTPEEKIR----EYFGGFGEVESIELPMDNKTNKRRGFCFITFNQE 223
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>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+ G +    ED    +L+E+F K G +T + +  D   G S+G  ++ F   SS  + 
Sbjct: 161 MFIGGLNWDTTED----NLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216

Query: 277 LE 282
           ++
Sbjct: 217 VK 218
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>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +1

Query: 97  VFVKG--FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTD-ESSF 267
           +FV G  FD+++Q      +L++ FSK G+I+ V V  D E   S+G  ++ F + + + 
Sbjct: 8   LFVGGLSFDTNEQ------ALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 268 SKALELSGSDLGGCNLYVAEA 330
              + ++G  + G  + V +A
Sbjct: 62  DAMMAMNGKSVDGRQIRVDQA 82
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>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +1

Query: 97  VFVKG--FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTD-ESSF 267
           +FV G  FD+++Q      +L++ FSK G+I+ V V  D E   S+G  ++ F + + + 
Sbjct: 8   LFVGGLSFDTNEQ------ALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 268 SKALELSGSDLGGCNLYVAEA 330
              + ++G  + G  + V +A
Sbjct: 62  DAMMAMNGKSVDGRQIRVDQA 82
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>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +1

Query: 97  VFVKG--FDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTD-ESSF 267
           +FV G  FD+++Q      +L++ FSK G+I+ V V  D E   S+G  ++ F + + + 
Sbjct: 8   LFVGGLSFDTNEQ------ALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAK 61

Query: 268 SKALELSGSDLGGCNLYVAEA 330
              + ++G  + G  + V +A
Sbjct: 62  DAMMAMNGKSVDGRQIRVDQA 82
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>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 278

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 139 IRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF 249
           I   LQE+F++ G +TR+ +    + G SKG AY+++
Sbjct: 53  IEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEY 89
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>IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 RNA-binding|
           subunit (eIF-3 RNA-binding subunit) (eIF3 p33)
           (Translation initiation factor eIF3, p33 subunit)
          Length = 274

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
 Frame = +1

Query: 130 EDAIRSSLQEHFS-KCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLG 303
           E+A  +SL+E        I RVSV  + E G S+G+A++ F+ E    +AL  L G    
Sbjct: 200 ENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFVTFSSEEVAEQALRFLDGRGYM 259

Query: 304 GCNLYVAEAKPK 339
              L V  +KPK
Sbjct: 260 NLILRVEWSKPK 271
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>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 21/81 (25%), Positives = 39/81 (48%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV G  S+  +D +R    E +S+ GEIT + V  D     S+G  ++ F+ ++    A
Sbjct: 25  IFVGGLTSNTTDDLMR----EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAA 80

Query: 277 LELSGSDLGGCNLYVAEAKPK 339
           ++     + G  +    A P+
Sbjct: 81  MKQRPHIIDGKTVDPKRAVPR 101



 Score = 32.3 bits (72), Expect = 0.79
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 118 SSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           S  +ED     L E+F+K G +T+  + +D      +G  ++ F D  S  + +
Sbjct: 119 SGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = +1

Query: 118 SSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA-LELSGS 294
           +S++ED      ++ FS  GE+  V V +D   G SKG AY+ F D  +   A +EL   
Sbjct: 355 TSKEED-----FRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVELDKQ 409

Query: 295 DLGGCNLYVAEAKPK 339
              G  L++   + K
Sbjct: 410 IFQGRLLHILPGEEK 424
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>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDF 249
           L+E+FS+ G +TR+ +    + G SKG AY++F
Sbjct: 57  LREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEF 89
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>TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 33.9 bits (76), Expect = 0.27
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           L+E+FS  GE+  V V  D + G SKG  ++ FT+  +  K +
Sbjct: 120 LKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162
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>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+ G +    ED     L++ F+K G I+ V V  D E   S+G  ++ F +      A
Sbjct: 7   LFIGGLNFETNEDC----LEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDA 62

Query: 277 -LELSGSDLGGCNLYVAEA 330
            + ++G  + G  + V +A
Sbjct: 63  MMAMNGKSVDGRQIRVDQA 81
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>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1|
          Length = 858

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +1

Query: 163 FSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALEL-SGSDLGGCNLYVAEAKPK 339
           F   G + +V +P+D +  ASKG+A++ F+D +    A     GS   G  L++  A  K
Sbjct: 334 FESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRAKDGSTFQGRLLHLLPAVNK 393
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>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 300

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVAE 327
           L   F   G+I  + +P D+E+   +G A++++      + A++ ++ S+L G  + V  
Sbjct: 22  LNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSELCGRTIRVNL 81

Query: 328 AKP 336
           AKP
Sbjct: 82  AKP 84
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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV+   ++  E+ +  S    FS+ G++ RV    D+        A++ F +     KA
Sbjct: 340 LFVRNLANTVTEEILEKS----FSQFGKLERVKKLKDY--------AFIHFDERDGAVKA 387

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
           +E ++G DL G N+ +  AKP  Q
Sbjct: 388 MEEMNGKDLEGENIEIVFAKPPDQ 411
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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV+   ++  E+ +  S    FS+ G++ RV    D+        A++ F +     KA
Sbjct: 250 LFVRNLANTVTEEILEKS----FSQFGKLERVKKLKDY--------AFIHFDERDGAVKA 297

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
           +E ++G DL G N+ +  AKP  Q
Sbjct: 298 MEEMNGKDLEGENIEIVFAKPPDQ 321
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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV+   ++  E+     L++ FS+ G++ RV    D+        A++ F +     KA
Sbjct: 340 LFVRNLANTVTEEI----LEKAFSQFGKLERVKKLKDY--------AFIHFDERDGAVKA 387

Query: 277 LE-LSGSDLGGCNLYVAEAKPKGQ 345
           +E ++G DL G N+ +  AKP  Q
Sbjct: 388 MEEMNGKDLEGENIEIVFAKPPDQ 411
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>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           L+E FSK G I  VS+  D ++  S+G A++ F +     +A E  +G +L G  + V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
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>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           L+E FSK G I  VS+  D ++  S+G A++ F +     +A E  +G +L G  + V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
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>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           L+E FSK G I  VS+  D ++  S+G A++ F +     +A E  +G +L G  + V
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRV 191
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>TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43)|
          Length = 414

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           L+++FS  GE+  V V  D + G SKG  ++ FT+  +  K +
Sbjct: 120 LKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVM 162
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>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           L+E FS+ G ++ V+V  D   G S+G A++ F       +A+E  +G +L G  + V
Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRV 190
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>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1|
          Length = 819

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV+      +E    S L+  FS  G+I  + V  D     SKG AY+ + D  +  +A
Sbjct: 297 LFVRNLSYETKE----SELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEA 352

Query: 277 L-ELSGSDLGGCNLYVAEAKPK 339
              L G    G  L++  A  K
Sbjct: 353 YRNLDGKIFQGRLLHILPASQK 374
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>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           L+E FS+ G ++ V+V  D   G S+G A++ F       +A+E  +G +L G  + V
Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRV 192
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>YHC4_YEAST (P38741) Hypothetical 80.1 kDa protein in SNF6-SPO11 intergenic|
           region
          Length = 713

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV    ++  +D +  S+ E+F K G++ RV V  D+   A++  A++ + ++     A
Sbjct: 95  IFVASLAAALSDDELCLSVTENFKKYGDLARVKVLRDN---ANRPYAFVQYNNDHDAKHA 151

Query: 277 L-ELSGSDLGGCNLYVAEAK 333
           L    G+ L G  L    AK
Sbjct: 152 LIRAQGTLLNGRRLRCEPAK 171
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>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1|
          Length = 878

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = +1

Query: 136 AIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA-LELSGSDLGGCN 312
           A     ++ FS  GE+  V + +D   G SKG AY+ F +  + + A +EL      G  
Sbjct: 341 ATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVELDKQIFQGRL 400

Query: 313 LYVAEAKPK 339
           L++  A  K
Sbjct: 401 LHILPADAK 409
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>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog|
          Length = 300

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 151 LQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLG 303
           LQ++F K GEI ++ +  D     SKG A++ F D  S   A +  G   G
Sbjct: 123 LQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRG 173
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>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           +L+  F K G +  V +P D     S+G A++ F D+     A++ + G+ L G  L V 
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87

Query: 325 EAK 333
            A+
Sbjct: 88  MAR 90
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>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           +L+  F K G +  V +P D     S+G A++ F D+     A++ + G+ L G  L V 
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87

Query: 325 EAK 333
            A+
Sbjct: 88  MAR 90
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>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           +L+  F K G +  V +P D     S+G A++ F D+     A++ + G+ L G  L V 
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87

Query: 325 EAK 333
            A+
Sbjct: 88  MAR 90
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>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           +L+  F K G +  V +P D     S+G A++ F D+     A++ + G+ L G  L V 
Sbjct: 28  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 87

Query: 325 EAK 333
            A+
Sbjct: 88  MAR 90
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>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 148 SLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYVA 324
           +L+  F K G +  V +P D     S+G A++ F D+     A++ + G+ L G  L V 
Sbjct: 29  TLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQ 88

Query: 325 EAK 333
            A+
Sbjct: 89  MAR 91
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>HRP3_PLAFS (P14586) Histidine-rich protein|
          Length = 82

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/35 (48%), Positives = 18/35 (51%)
 Frame = -1

Query: 517 HLLYHHLGHQIGQTCHRHHGHLTGQTCRRHHDHQI 413
           H L HHL H+     HRHH H      R HH HQI
Sbjct: 14  HHLNHHLYHRHHH--HRHHHH------RHHHRHQI 40
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>FUSIP_MOUSE (Q9R0U0) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (Neural-specific SR pro
          Length = 262

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 130 EDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           +D     L+  F + G I  V VP+D      +G AY+ F D      AL
Sbjct: 19  DDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
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>FUSIP_HUMAN (O75494) FUS-interacting serine-arginine-rich protein 1|
           (TLS-associated protein with Ser-Arg repeats)
           (TLS-associated protein with SR repeats) (TASR)
           (TLS-associated serine-arginine protein) (TLS-associated
           SR protein) (40 kDa SR-repressor pr
          Length = 262

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +1

Query: 130 EDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           +D     L+  F + G I  V VP+D      +G AY+ F D      AL
Sbjct: 19  DDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
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>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1|
          Length = 861

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFT-DESSFSK 273
           +F++    S  ED      ++ FS  GE+  V V +D   G SKG AY+ F   E +   
Sbjct: 327 LFLRNILYSSTED----DFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQA 382

Query: 274 ALELSGSDLGGCNLYVAEA 330
            +EL      G  L++  A
Sbjct: 383 YIELDKQIFQGRLLHILAA 401
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>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +1

Query: 100 FVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           F K F          +SL+++F   G+I    V  D + G S+G  ++   D ++  +A 
Sbjct: 10  FTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERAC 69

Query: 280 ELSGSDLGG----CNLYVAEAKPK 339
           +     + G     NL    AKP+
Sbjct: 70  KDPNPIIDGRKANVNLAYLGAKPR 93
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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 163 FSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           FS+ GEI  +++  D + G SKG  ++ + D+ S   A++
Sbjct: 56  FSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVD 95
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>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDL 300
           +  L+E+F + GE+    V  D     S+G  ++ F D++   K L  S  +L
Sbjct: 33  QEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85
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>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDL 300
           +  L+E+F + GE+    V  D     S+G  ++ F D++   K L  S  +L
Sbjct: 33  QEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85
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>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDL 300
           +  L+E+F + GE+    V  D     S+G  ++ F D++   K L  S  +L
Sbjct: 33  QEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85
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>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome|
           II
          Length = 473

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +FV     +  E  + S     ++ C       +  D +   S+G  ++ FTDE+    A
Sbjct: 188 IFVGDLSPNVNEFDVYSLFASRYNSCKS---AKIMTDPQTNVSRGYGFVRFTDENDQKSA 244

Query: 277 L-ELSGSDLGGCNLYVAEAKPKGQ 345
           L E+ G   G   + V  A PK +
Sbjct: 245 LAEMQGQICGDRPIRVGLATPKSK 268
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>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +1

Query: 100 FVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           F K F          +SL+++F   G+I    V  D + G S+G  ++   D ++  +A 
Sbjct: 31  FTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRAC 90

Query: 280 ELSGSDLGG----CNLYVAEAKPK 339
           +     + G     NL    AKP+
Sbjct: 91  KDPNPIIDGRKANVNLAYLGAKPR 114
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>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 163 FSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           FS+ GEI  +++  D + G SKG  ++ + D+ S   A++
Sbjct: 56  FSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVD 95
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>AUA1_YEAST (P32450) Ammonia regulation of amino acid uptake protein|
          Length = 94

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -1

Query: 508 YHHLGHQIGQTCHRHHGHLTGQTCRRHHDHQIGRTCHRQ 392
           Y  + HQI +  H+HH     Q  RR H H     C RQ
Sbjct: 44  YRQIHHQIRRRTHQHH-----QIRRRTHQHHHRSNCSRQ 77
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>SRR35_HUMAN (Q8WXF0) 35 kDa SR repressor protein (SRrp35)|
          Length = 261

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +1

Query: 115 DSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           D+++ ED     L+  F + G I  V +P+D      +G AY+ F D      AL
Sbjct: 19  DATRPED-----LRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
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>RNPS1_XENLA (Q5XG24) RNA-binding protein with serine-rich domain 1|
          Length = 283

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMD-HENGASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +  + E FS  G+I  + +P+D +    SKG AY++F       KAL+ + G  + G
Sbjct: 151 KDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDG 207
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>RNPS1_RAT (Q6AYK1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENG-ASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +  + E FS  G+I  + +P++  +   SKG AY++F +     KAL+ + G  + G
Sbjct: 174 KDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 230
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>RNPS1_PONPY (Q5NVM8) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENG-ASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +  + E FS  G+I  + +P++  +   SKG AY++F +     KAL+ + G  + G
Sbjct: 174 KDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 230
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>RNPS1_MOUSE (Q99M28) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENG-ASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +  + E FS  G+I  + +P++  +   SKG AY++F +     KAL+ + G  + G
Sbjct: 174 KDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 230
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>RNPS1_MACFA (Q4R5N1) RNA-binding protein with serine-rich domain 1|
          Length = 305

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENG-ASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +  + E FS  G+I  + +P++  +   SKG AY++F +     KAL+ + G  + G
Sbjct: 174 KDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 230
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>RNPS1_HUMAN (Q15287) RNA-binding protein with serine-rich domain 1 (SR-related|
           protein LDC2)
          Length = 305

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENG-ASKGIAYMDFTDESSFSKALE-LSGSDLGG 306
           +  + E FS  G+I  + +P++  +   SKG AY++F +     KAL+ + G  + G
Sbjct: 174 KDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDG 230
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>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           +  +++ FS+ G I    V +D   G S+G+A++ F   S   +A+
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAI 164
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>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +1

Query: 142 RSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKAL 279
           +  +++ FS+ G I    V +D   G S+G+A++ F   S   +A+
Sbjct: 119 QKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAI 164
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>NOP12_NEUCR (Q7S2L7) Nucleolar protein 12|
          Length = 594

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 175 GEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSG 291
           G++  V V  D      KG AY+ F DE++   A+ L+G
Sbjct: 370 GKVESVRVVRDPVTRVGKGFAYVQFCDENAVESAILLNG 408
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>ITPR3_BOVIN (Q8WN95) Inositol 1,4,5-trisphosphate receptor type 3 (Type 3|
            inositol 1,4,5-trisphosphate receptor) (Type 3 InsP3
            receptor) (IP3 receptor isoform 3) (InsP3R3)
          Length = 2664

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
 Frame = +2

Query: 2    VRLDLAAEXVQVLFAPGMVDLLGSQVEVPASQYLLRVLIHLNRR----MLFGA---LFKN 160
            + LD   E  + +F  G    +  +V+    + LLRVLIHL       ++ GA   LFK+
Sbjct: 1016 MNLDRIGEQAEAMFGVGKTSSM-LEVDDEGGRMLLRVLIHLTMHDYAPLVSGALQLLFKH 1074

Query: 161  TSLNVEKLHVSQFRWIMRMVQAKE 232
             S   E +H   F+ +  ++ A++
Sbjct: 1075 FSQRQEVMHT--FKQVQLLISAQD 1096
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>IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 90 kDa subunit|
           (eIF3 p90) (Cell cycle regulation and translation
           initiation protein)
          Length = 763

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +1

Query: 121 SQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMD 246
           S +   ++ +L   FSK G++  +  P+D   G +KG  +++
Sbjct: 89  SAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVE 130
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>HYPB_BRAJA (Q45257) Hydrogenase nickel incorporation protein hypB|
          Length = 302

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -1

Query: 505 HHLGHQIGQTCHRHHGHLTGQTCRRHHDHQIG 410
           H   H  G   H HH H   Q    HHDH  G
Sbjct: 24  HGHDHDHGHDGHHHHHHGHDQDHHHHHDHAHG 55
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>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFT 252
           +F+ G D    ++    SL++HF + GEI  V V  D +   S+G  ++ ++
Sbjct: 19  LFIGGLDYRTTDE----SLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYS 66
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>MTP1_ARATH (Q9ZT63) Metal tolerance protein 1 (AtMTP1) (Zinc transporter|
           ZAT-1) (ZAT1p) [Contains: Metal tolerance protein 1
           short form]
          Length = 398

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 505 HHLGHQIGQTCHRHHGHLTGQTCRRHHDHQIGRT 404
           H  GH  G   H H   +T  T   HHDH+ G +
Sbjct: 188 HGHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHS 221
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>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFT 252
           +F+ G      +D    SL+EHF K G +T   V  D +   S+G  ++ ++
Sbjct: 37  LFIGGLSFETTDD----SLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84
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>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFT 252
           +F+ G      +D    SL+EHF K G +T   V  D +   S+G  ++ ++
Sbjct: 37  LFIGGLSFETTDD----SLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84
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>LAH1_YEAST (P33399) La protein homolog (La ribonucleoprotein) (La autoantigen|
           homolog)
          Length = 275

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 121 SQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDF 249
           + Q   ++ +L+  F K GEI +V +  DH N    G   ++F
Sbjct: 137 ASQIPELQENLEAFFKKLGEINQVRLRRDHRNKKFNGTVLVEF 179
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>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 378

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFT 252
           +F+ G      +D    SL+EHF K G +T   V  D +   S+G  ++ ++
Sbjct: 37  LFIGGLSFETTDD----SLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYS 84
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>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = +1

Query: 97  VFVKGFDSSQQEDAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKA 276
           +F+ G D    ++    +L+ HF K G I  V V  D     S+G  ++ ++  S   +A
Sbjct: 33  LFIGGLDYRTTDE----NLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA 88
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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 14/43 (32%), Positives = 16/43 (37%)
 Frame = -1

Query: 517 HLLYHHLGHQIGQTCHRHHGHLTGQTCRRHHDHQIGRTCHRQN 389
           H  +HH GH      H HH H  G     HH H      H  +
Sbjct: 226 HHHHHHHGH------HHHHHHHHGHHHHHHHHHDAHHHHHHHH 262



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = -1

Query: 517 HLLYHHLGHQIGQTCHRHHGHLTGQTCRRHHDHQIGRTCHRQN 389
           H  +HH GH      H HHGH        HH H  G   H  +
Sbjct: 216 HHHHHHHGHHHHH--HHHHGH------HHHHHHHHGHHHHHHH 250



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -1

Query: 517 HLLYHHLGHQIGQTCHRHHGHLTGQTCRRHHDH 419
           H  +HH  H  G   H HH H  G     HH H
Sbjct: 212 HAPHHHHHHHHGHHHHHHHHH--GHHHHHHHHH 242



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -1

Query: 508 YHHLGHQIGQTCHRHHGHLTGQTCRRHHDH 419
           +HHLG+      H HH H        HH H
Sbjct: 163 HHHLGYHHHHAPHHHHHHHHAPHHHHHHHH 192
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>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +1

Query: 145 SSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE-LSGSDLGGCNLYV 321
           + L+  F + G+I  V +P D  +  SKG  ++ F +      AL+   G  + G  L V
Sbjct: 33  NDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRV 92

Query: 322 AEAK 333
             AK
Sbjct: 93  TLAK 96
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>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +1

Query: 160 HFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALELSGSDLGGCNLYVAEAKP 336
           +FS+ G +TR  +      G SKG A+++F  E       E   + L G  L      P
Sbjct: 64  YFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMP 122
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>CWC2_ASPFU (Q4WU07) Pre-mRNA-splicing factor cwc2|
          Length = 414

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +1

Query: 133 DAIRSSLQEHFSKCGEITRVSVPMDHENGASKGIAYMDFTDESSFSKALE 282
           D I   +  HF++ G+I R+ V        S+G+A++ +T+E++   A E
Sbjct: 203 DDIEEVVSRHFAEWGQIDRIRVL------TSRGVAFVTYTNEANAQFAKE 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,027,596
Number of Sequences: 219361
Number of extensions: 989166
Number of successful extensions: 3098
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 2794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3029
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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