ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29o13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234677.1|HVU234677 Hordeum vulgare genomic DNA fragment; c... 565 e-158
2ref|XM_480492.1| Oryza sativa (japonica cultivar-group), mRNA 135 2e-28
3gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nuc... 135 2e-28
4dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
5dbj|AK059471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 2e-28
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8ref|XM_473923.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
9dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
10dbj|AK063918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
11emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, stra... 50 0.007
12ref|XM_748256.1| Aspergillus fumigatus Af293 hypothetical protei... 44 0.45
13emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 44 0.45
14emb|AJ344214.2|YEN344214 Yersinia enterocolitica (type 0:8) yts1... 44 0.45
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
16gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 1.8
17gb|AC009385.8| Drosophila melanogaster 3L BAC RP98-23M20 (Roswel... 42 1.8
18gb|AC009380.6| Drosophila melanogaster 3L BAC RP98-17L5 (Roswell... 42 1.8
19ref|NM_140792.1| Drosophila melanogaster MYPT-75D CG6896-RA (MYP... 42 1.8
20gb|AY075426.1| Drosophila melanogaster LD46604 full length cDNA 42 1.8
21emb|AL824703.12| Mouse DNA sequence from clone RP23-317M2 on chr... 42 1.8
22gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence 42 1.8
23gb|AY105669.1| Zea mays PCO148095 mRNA sequence 42 1.8
24gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66... 42 1.8
25gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, com... 40 7.0
26gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.0
27ref|XM_474927.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
28emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in ... 40 7.0
29ref|XM_382976.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 7.0
30gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete s... 40 7.0
31gb|AC162031.12| Medicago truncatula clone mth2-194a22, complete ... 40 7.0
32gb|AC137819.19| Medicago truncatula clone mth2-21i24, complete s... 40 7.0
33emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 40 7.0
34gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, com... 40 7.0
35emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
36emb|CR859732.1| Pongo pygmaeus mRNA; cDNA DKFZp468I108 (from clo... 40 7.0
37gb|AC087115.10| Mus Musculus Strain C57Bl6/J Chromosome 8 RP23-9... 40 7.0
38dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, ... 40 7.0
39gb|AC144670.1| Homo sapiens chromosome 8, clone XXfos-85539D6, c... 40 7.0
40gb|AC093206.2| Homo sapiens chromosome 5 clone CTC-448D22, compl... 40 7.0
41emb|BX323076.9| Zebrafish DNA sequence from clone DKEY-106A24 in... 40 7.0
42gb|AC022968.9| Homo sapiens chromosome 18, clone RP11-421N8, com... 40 7.0
43gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N1... 40 7.0
44dbj|AK068979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
45emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in ... 40 7.0
46dbj|AK063532.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
47dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, cl... 40 7.0
48dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.0
49dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.0
50emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, c... 40 7.0
51emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 7.0
52dbj|AB022785.1| Homo sapiens ASH2L gene, complete cds, similar t... 40 7.0
53dbj|AB020982.1| Homo sapiens ASH2L mRNA, complete cds, similar t... 40 7.0
54dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 7.0 
>emb|AJ234677.1|HVU234677 Hordeum vulgare genomic DNA fragment; clone MWG0957.uni
          Length = 345

 Score =  565 bits (285), Expect = e-158
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 231 aatagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgg 60

                                                                       
Query: 291 atctgaccttggtggctgcaacttgtatgttgctgaagctaagcctaagggtcaatttgg 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atctgaccttggtggctgcaacttgtatgttgctgaagctaagcctaagggtcaatttgg 120

                                                                       
Query: 351 tggtgggggtggtcgatctggtggtagggatggtggccgttctggcggtggcaggttcgg 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 121 tggtgggggtggtcgatctggtggtagggatggtggccgttctggcggtggcaggttcgs 180

                                                                       
Query: 411 ccgatctggtggtcgtgatggcggcggcaggtttggccggtcaggtggccgtgatggcgg 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccgatctggtggtcgtgatggcggcggcaggtttggccggtcaggtggccgtgatggcgg 240

                                                          
Query: 471 tggcaggtttggccgatctggtggccgagatggtggtagaggaggtg 517
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggcaggtttggccgatctggtggccgagatggtggtagaggaggtg 287
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>ref|XM_480492.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2090

 Score =  135 bits (68), Expect = 2e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                        
Query: 175  ggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaaggaata 234
            ||||| || ||||| ||||||||||| ||||||| ||| | ||||||||||||||| |||
Sbjct: 1419 ggagagatcacacgagtctcagttcccatggatcgtgaaactggtgcaagcaaagggata 1478

                                                                        
Query: 235  gcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtggatct 294
            || ||||| |||||||  ||| ||  |||||| ||||| |||||||| || ||||| |||
Sbjct: 1479 gcatacatagattttaaggatcaggcttccttctcgaaggcacttgaactaagtgggtct 1538

                                                        
Query: 295  gaccttggtggctgcaacttgtatgttgctgaagctaagcctaa 338
            ||||||||||||| |||| ||||||||| |||||| ||||||||
Sbjct: 1539 gaccttggtggctacaacctgtatgttgatgaagccaagcctaa 1582



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 98   tatttgttaagggttttgattcatctc 124
            ||||||| |||||||||||||||||||
Sbjct: 1342 tatttgtcaagggttttgattcatctc 1368
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>gb|AY644645.1| Oryza sativa (indica cultivar-group) putative nucleolin (NUC) mRNA,
            complete cds
          Length = 2039

 Score =  135 bits (68), Expect = 2e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                        
Query: 175  ggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaaggaata 234
            ||||| || ||||| ||||||||||| ||||||| ||| | ||||||||||||||| |||
Sbjct: 1332 ggagagatcacacgagtctcagttcccatggatcgtgaaactggtgcaagcaaagggata 1391

                                                                        
Query: 235  gcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtggatct 294
            || ||||| |||||||  ||| ||  |||||| ||||| |||||||| || ||||| |||
Sbjct: 1392 gcatacatagattttaaggatcaggcttccttctcgaaggcacttgaactaagtgggtct 1451

                                                        
Query: 295  gaccttggtggctgcaacttgtatgttgctgaagctaagcctaa 338
            ||||||||||||| |||| ||||||||| |||||| ||||||||
Sbjct: 1452 gaccttggtggctacaacctgtatgttgatgaagccaagcctaa 1495



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 98   tatttgttaagggttttgattcatctc 124
            ||||||| |||||||||||||||||||
Sbjct: 1255 tatttgtcaagggttttgattcatctc 1281
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>dbj|AK103422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K11, full
            insert sequence
          Length = 2089

 Score =  135 bits (68), Expect = 2e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                        
Query: 175  ggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaaggaata 234
            ||||| || ||||| ||||||||||| ||||||| ||| | ||||||||||||||| |||
Sbjct: 1418 ggagagatcacacgagtctcagttcccatggatcgtgaaactggtgcaagcaaagggata 1477

                                                                        
Query: 235  gcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtggatct 294
            || ||||| |||||||  ||| ||  |||||| ||||| |||||||| || ||||| |||
Sbjct: 1478 gcatacatagattttaaggatcaggcttccttctcgaaggcacttgaactaagtgggtct 1537

                                                        
Query: 295  gaccttggtggctgcaacttgtatgttgctgaagctaagcctaa 338
            ||||||||||||| |||| ||||||||| |||||| ||||||||
Sbjct: 1538 gaccttggtggctacaacctgtatgttgatgaagccaagcctaa 1581



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 101  ttgttaagggttttgattcatctc 124
            |||| |||||||||||||||||||
Sbjct: 1344 ttgtcaagggttttgattcatctc 1367
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>dbj|AK059471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-E02, full
           insert sequence
          Length = 1160

 Score =  135 bits (68), Expect = 2e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                       
Query: 175 ggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaaggaata 234
           ||||| || ||||| ||||||||||| ||||||| ||| | ||||||||||||||| |||
Sbjct: 549 ggagagatcacacgagtctcagttcccatggatcgtgaaactggtgcaagcaaagggata 608

                                                                       
Query: 235 gcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtggatct 294
           || ||||| |||||||  ||| ||  |||||| ||||| |||||||| || ||||| |||
Sbjct: 609 gcatacatagattttaaggatcaggcttccttctcgaaggcacttgaactaagtgggtct 668

                                                       
Query: 295 gaccttggtggctgcaacttgtatgttgctgaagctaagcctaa 338
           ||||||||||||| |||| ||||||||| |||||| ||||||||
Sbjct: 669 gaccttggtggctacaacctgtatgttgatgaagccaagcctaa 712



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 98  tatttgttaagggttttgattcatctc 124
           ||||||| |||||||||||||||||||
Sbjct: 472 tatttgtcaagggttttgattcatctc 498
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 232     atagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgga 291
               ||||| ||||| |||||||  ||| ||  |||||| ||||| |||||||| || ||||| 
Sbjct: 5416651 atagcatacatagattttaaggatcaggcttccttctcgaaggcacttgaactaagtggg 5416592

                                                              
Query: 292     tctgaccttggtggctgcaacttgtatgttgctgaagctaagcctaa 338
               |||||||||||||||| |||| ||||||||| |||||| ||||||||
Sbjct: 5416591 tctgaccttggtggctacaacctgtatgttgatgaagccaagcctaa 5416545



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175     ggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaagg 230
               ||||| || ||||| ||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 5417199 ggagagatcacacgagtctcagttcccatggatcgtgaaactggtgcaagcaaagg 5417144



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 98      tatttgttaagggttttgattcatctc 124
               ||||||| |||||||||||||||||||
Sbjct: 5417344 tatttgtcaagggttttgattcatctc 5417318
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>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056O06
          Length = 151038

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                         
Query: 232   atagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgga 291
             ||||| ||||| |||||||  ||| ||  |||||| ||||| |||||||| || ||||| 
Sbjct: 86462 atagcatacatagattttaaggatcaggcttccttctcgaaggcacttgaactaagtggg 86403

                                                            
Query: 292   tctgaccttggtggctgcaacttgtatgttgctgaagctaagcctaa 338
             |||||||||||||||| |||| ||||||||| |||||| ||||||||
Sbjct: 86402 tctgaccttggtggctacaacctgtatgttgatgaagccaagcctaa 86356



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 175   ggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaagg 230
             ||||| || ||||| ||||||||||| ||||||| ||| | |||||||||||||||
Sbjct: 87010 ggagagatcacacgagtctcagttcccatggatcgtgaaactggtgcaagcaaagg 86955



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 98    tatttgttaagggttttgattcatctc 124
             ||||||| |||||||||||||||||||
Sbjct: 87155 tatttgtcaagggttttgattcatctc 87129
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>ref|XM_473923.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2124

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 127/158 (80%)
 Strand = Plus / Plus

                                                                        
Query: 172  tgtggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaagga 231
            |||||||| |||||||| || ||| |||| | |||| |||| |  |||||||||||||| 
Sbjct: 1726 tgtggagagattacacgggtttcaattccaaaggattatgaaaccggtgcaagcaaaggg 1785

                                                                        
Query: 232  atagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgga 291
            || || |||||||||||| | ||  |  ||||||| |||||||||   || || | ||||
Sbjct: 1786 atggcgtacatggattttgcggacaacggttccttgtcgaaagcatacgaactgaatgga 1845

                                                  
Query: 292  tctgaccttggtggctgcaacttgtatgttgctgaagc 329
            |||||||| ||||| | || ||||||||||| ||||||
Sbjct: 1846 tctgacctcggtggatacagcttgtatgttgatgaagc 1883
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>dbj|AK103446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G11, full
            insert sequence
          Length = 2447

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 127/158 (80%)
 Strand = Plus / Plus

                                                                        
Query: 172  tgtggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaagga 231
            |||||||| |||||||| || ||| |||| | |||| |||| |  |||||||||||||| 
Sbjct: 1868 tgtggagagattacacgggtttcaattccaaaggattatgaaaccggtgcaagcaaaggg 1927

                                                                        
Query: 232  atagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgga 291
            || || |||||||||||| | ||  |  ||||||| |||||||||   || || | ||||
Sbjct: 1928 atggcgtacatggattttgcggacaacggttccttgtcgaaagcatacgaactgaatgga 1987

                                                  
Query: 292  tctgaccttggtggctgcaacttgtatgttgctgaagc 329
            |||||||| ||||| | || ||||||||||| ||||||
Sbjct: 1988 tctgacctcggtggatacagcttgtatgttgatgaagc 2025
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>dbj|AK063918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B06, full
            insert sequence
          Length = 1943

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 127/158 (80%)
 Strand = Plus / Plus

                                                                        
Query: 172  tgtggagaaattacacgtgtctcagttccgatggatcatgagaatggtgcaagcaaagga 231
            |||||||| |||||||| || ||| |||| | |||| |||| |  |||||||||||||| 
Sbjct: 1313 tgtggagagattacacgggtttcaattccaaaggattatgaaaccggtgcaagcaaaggg 1372

                                                                        
Query: 232  atagcttacatggattttactgatgagagttccttttcgaaagcacttgagcttagtgga 291
            || || |||||||||||| | ||  |  ||||||| |||||||||   || || | ||||
Sbjct: 1373 atggcgtacatggattttgcggacaacggttccttgtcgaaagcatacgaactgaatgga 1432

                                                  
Query: 292  tctgaccttggtggctgcaacttgtatgttgctgaagc 329
            |||||||| ||||| | || ||||||||||| ||||||
Sbjct: 1433 tctgacctcggtggatacagcttgtatgttgatgaagc 1470
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>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 456   tggccgtgatggcggtggcaggttt 480
             |||||||||||||||||||||||||
Sbjct: 17671 tggccgtgatggcggtggcaggttt 17695
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>ref|XM_748256.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g13050)
           partial mRNA
          Length = 2334

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 489 tggtggccgagatggtggtaga 510
           ||||||||||||||||||||||
Sbjct: 407 tggtggccgagatggtggtaga 386
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>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
              complete sequence
          Length = 164805

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 288    tggatctgaccttggtggctgcaacttgtatgttgctgaagc 329
              |||||||||||| ||||| | || ||||||||||| ||||||
Sbjct: 162182 tggatctgacctcggtggatacagcttgtatgttgatgaagc 162223
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>emb|AJ344214.2|YEN344214 Yersinia enterocolitica (type 0:8) yts1S gene, yts1C gene, yts1D gene,
             yts1E gene, yts1F gene, yts1G gene, yts1H gene, yts1I
             gene, yts1J gene, yts1K gene, yts1L gene, yts1M gene,
             yts1O gene and chiY gene
          Length = 16996

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 456   tggccgtgatggcggtggcaggtttggccg 485
             |||| ||| |||||||||||||||||||||
Sbjct: 10196 tggcggtgctggcggtggcaggtttggccg 10225
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 288      tggatctgaccttggtggctgcaacttgtatgttgctgaagc 329
                |||||||||||| ||||| | || ||||||||||| ||||||
Sbjct: 31584499 tggatctgacctcggtggatacagcttgtatgttgatgaagc 31584540



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 53      atggtggatcttttgggaag 72
               ||||||||||||||||||||
Sbjct: 8045421 atggtggatcttttgggaag 8045402
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 381    tggtggccgttctggcggtgg 401
              |||||||||||||||||||||
Sbjct: 631922 tggtggccgttctggcggtgg 631902
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>gb|AC009385.8| Drosophila melanogaster 3L BAC RP98-23M20 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 178628

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 482    gccgatctggtggccgagatg 502
              |||||||||||||||||||||
Sbjct: 131952 gccgatctggtggccgagatg 131972
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>gb|AC009380.6| Drosophila melanogaster 3L BAC RP98-17L5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 187973

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 482   gccgatctggtggccgagatg 502
             |||||||||||||||||||||
Sbjct: 76283 gccgatctggtggccgagatg 76303
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>ref|NM_140792.1| Drosophila melanogaster MYPT-75D CG6896-RA (MYPT-75D), mRNA
          Length = 3973

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 482 gccgatctggtggccgagatg 502
           |||||||||||||||||||||
Sbjct: 900 gccgatctggtggccgagatg 920
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>gb|AY075426.1| Drosophila melanogaster LD46604 full length cDNA
          Length = 3975

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 482 gccgatctggtggccgagatg 502
           |||||||||||||||||||||
Sbjct: 881 gccgatctggtggccgagatg 901
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>emb|AL824703.12| Mouse DNA sequence from clone RP23-317M2 on chromosome 4, complete
             sequence
          Length = 80922

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 497   gagatggtggtagaggaggtg 517
             |||||||||||||||||||||
Sbjct: 53524 gagatggtggtagaggaggtg 53504
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>gb|BT024069.1| Zea mays clone EL01N0450D06 mRNA sequence
          Length = 2497

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 295  gaccttggtggctgcaacttgtatgttgctgaagctaagcc 335
            ||||||||||||| || ||||||||| | |||||| |||||
Sbjct: 2074 gaccttggtggctacagcttgtatgtcgatgaagccaagcc 2114



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 216  tggtgcaagcaaaggaatagcttacatggattt 248
            ||||| |||||||||||| || |||||||||||
Sbjct: 1995 tggtgtaagcaaaggaatggcgtacatggattt 2027
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>gb|AY105669.1| Zea mays PCO148095 mRNA sequence
          Length = 983

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 295 gaccttggtggctgcaacttgtatgttgctgaagctaagcc 335
           ||||||||||||| || ||||||||| | |||||| |||||
Sbjct: 836 gaccttggtggctacagcttgtatgtcgatgaagccaagcc 876



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 216 tggtgcaagcaaaggaatagcttacatggattt 248
           ||||| |||||||||||| || |||||||||||
Sbjct: 757 tggtgtaagcaaaggaatggcgtacatggattt 789
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>gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66 of 83 of the complete
             sequence
          Length = 294542

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 482   gccgatctggtggccgagatg 502
             |||||||||||||||||||||
Sbjct: 36113 gccgatctggtggccgagatg 36133
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>gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, complete sequence
          Length = 168316

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 417    tggtggtcgtgatggcggcggcag 440
              ||||||| ||||||||||||||||
Sbjct: 137387 tggtggtggtgatggcggcggcag 137364
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 482     gccgatctggtggccgagat 501
               ||||||||||||||||||||
Sbjct: 3286581 gccgatctggtggccgagat 3286600
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>ref|XM_474927.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1227

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  atggtggatcttttgggaag 72
           ||||||||||||||||||||
Sbjct: 853 atggtggatcttttgggaag 872
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>emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2,
             complete sequence
          Length = 223248

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   aatagcttacatggatttta 250
             ||||||||||||||||||||
Sbjct: 40815 aatagcttacatggatttta 40796
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>ref|XM_382976.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG02800.1)
           partial mRNA
          Length = 3456

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 tttgattcatctcaacagga 131
           ||||||||||||||||||||
Sbjct: 469 tttgattcatctcaacagga 488
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>gb|AC148607.16| Medicago truncatula clone mth2-43g15, complete sequence
          Length = 148291

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   cttggtggctgcaacttgta 317
             ||||||||||||||||||||
Sbjct: 18417 cttggtggctgcaacttgta 18436
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>gb|AC162031.12| Medicago truncatula clone mth2-194a22, complete sequence
          Length = 123712

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   cttggtggctgcaacttgta 317
             ||||||||||||||||||||
Sbjct: 95905 cttggtggctgcaacttgta 95886
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>gb|AC137819.19| Medicago truncatula clone mth2-21i24, complete sequence
          Length = 116989

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   cttggtggctgcaacttgta 317
             ||||||||||||||||||||
Sbjct: 90247 cttggtggctgcaacttgta 90266
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>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 231   aatagcttacatggattttactga 254
             ||||||| ||||||||||||||||
Sbjct: 37333 aatagctaacatggattttactga 37310
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>gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, complete sequence
          Length = 167209

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 417  tggtggtcgtgatggcggcggcag 440
            ||||||| ||||||||||||||||
Sbjct: 3947 tggtggtggtgatggcggcggcag 3970
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>emb|AL606601.3|OSJN00029 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055H05,
              complete sequence
          Length = 152329

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     atggtggatcttttgggaag 72
              ||||||||||||||||||||
Sbjct: 107545 atggtggatcttttgggaag 107526
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>emb|CR859732.1| Pongo pygmaeus mRNA; cDNA DKFZp468I108 (from clone DKFZp468I108)
          Length = 2768

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 418 ggtggtcgtgatggcggcggcagg 441
           ||||| ||||||||||||||||||
Sbjct: 15  ggtggccgtgatggcggcggcagg 38



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 454 ggtggccgtgatggcggtggcagg 477
           ||||||||||||||||| ||||||
Sbjct: 15  ggtggccgtgatggcggcggcagg 38
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>gb|AC087115.10| Mus Musculus Strain C57Bl6/J Chromosome 8 RP23-93A22, complete sequence
          Length = 181849

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    tggtggtcgtgatggcggcggcag 440
              ||||||| ||||||||||||||||
Sbjct: 177999 tggtggtggtgatggcggcggcag 178022
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>dbj|AB232921.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBb
          Length = 80562

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   aagaacacttctctaaatgt 174
             ||||||||||||||||||||
Sbjct: 36586 aagaacacttctctaaatgt 36567
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>gb|AC144670.1| Homo sapiens chromosome 8, clone XXfos-85539D6, complete sequence
          Length = 37413

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 454   ggtggccgtgatggcggtggcagg 477
             ||||||||||||||||| ||||||
Sbjct: 12093 ggtggccgtgatggcggcggcagg 12070



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   ggtggtcgtgatggcggcggcagg 441
             ||||| ||||||||||||||||||
Sbjct: 12093 ggtggccgtgatggcggcggcagg 12070
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>gb|AC093206.2| Homo sapiens chromosome 5 clone CTC-448D22, complete sequence
          Length = 161754

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    ttgattcatctcaacaggag 132
              ||||||||||||||||||||
Sbjct: 129196 ttgattcatctcaacaggag 129215
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>emb|BX323076.9| Zebrafish DNA sequence from clone DKEY-106A24 in linkage group 10,
              complete sequence
          Length = 156467

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    aatagcttacatggatttta 250
              ||||||||||||||||||||
Sbjct: 102906 aatagcttacatggatttta 102887
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>gb|AC022968.9| Homo sapiens chromosome 18, clone RP11-421N8, complete sequence
          Length = 187277

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    caagtgctcttcgcaccagg 51
             ||||||||||||||||||||
Sbjct: 22528 caagtgctcttcgcaccagg 22547
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>gb|AC008444.4|AC008444 Homo sapiens chromosome 5 clone CTC-338N15, complete sequence
          Length = 107553

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   ttgattcatctcaacaggag 132
             ||||||||||||||||||||
Sbjct: 48944 ttgattcatctcaacaggag 48925
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>dbj|AK068979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J09, full
            insert sequence
          Length = 2175

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   atggtggatcttttgggaag 72
            ||||||||||||||||||||
Sbjct: 1462 atggtggatcttttgggaag 1481
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>emb|BX908726.21| Zebrafish DNA sequence from clone DKEY-74I2 in linkage group 22,
             complete sequence
          Length = 180599

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 231   aatagcttacatggattttactga 254
             ||||||| ||||||||||||||||
Sbjct: 55472 aatagctaacatggattttactga 55449
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>dbj|AK063532.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B05, full
           insert sequence
          Length = 1990

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  atggtggatcttttgggaag 72
           ||||||||||||||||||||
Sbjct: 391 atggtggatcttttgggaag 410
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>dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1836B05, complete
              sequence
          Length = 156888

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 454    ggtggccgtgatggcggtggcagg 477
              ||||||||||||||||| ||||||
Sbjct: 146509 ggtggccgtgatggcggcggcagg 146532



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 418    ggtggtcgtgatggcggcggcagg 441
              ||||| ||||||||||||||||||
Sbjct: 146509 ggtggccgtgatggcggcggcagg 146532
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>dbj|AP003395.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-305N23, complete
              sequences
          Length = 205596

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     tgggaagccaagtggaggtc 85
              ||||||||||||||||||||
Sbjct: 170433 tgggaagccaagtggaggtc 170414
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>dbj|AP003393.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-196E1, complete
             sequences
          Length = 174303

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tgggaagccaagtggaggtc 85
             ||||||||||||||||||||
Sbjct: 49682 tgggaagccaagtggaggtc 49663
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>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence
          Length = 152969

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   aatagcttacatggatttta 250
             ||||||||||||||||||||
Sbjct: 27839 aatagcttacatggatttta 27858
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    ttcaagaacacttctctaaa 171
              ||||||||||||||||||||
Sbjct: 117090 ttcaagaacacttctctaaa 117109
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>dbj|AB022785.1| Homo sapiens ASH2L gene, complete cds, similar to Drosophila ash2
           gene
          Length = 34200

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 418 ggtggtcgtgatggcggcggcagg 441
           ||||| ||||||||||||||||||
Sbjct: 83  ggtggccgtgatggcggcggcagg 106



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 454 ggtggccgtgatggcggtggcagg 477
           ||||||||||||||||| ||||||
Sbjct: 83  ggtggccgtgatggcggcggcagg 106
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>dbj|AB020982.1| Homo sapiens ASH2L mRNA, complete cds, similar to Drosophila ash2
           sequence
          Length = 2368

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 418 ggtggtcgtgatggcggcggcagg 441
           ||||| ||||||||||||||||||
Sbjct: 2   ggtggccgtgatggcggcggcagg 25



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 454 ggtggccgtgatggcggtggcagg 477
           ||||||||||||||||| ||||||
Sbjct: 2   ggtggccgtgatggcggcggcagg 25
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>dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 1/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 418   ggtggtcgtgatggcggcggcagg 441
             ||||| ||||||||||||||||||
Sbjct: 69562 ggtggccgtgatggcggcggcagg 69539



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 454   ggtggccgtgatggcggtggcagg 477
             ||||||||||||||||| ||||||
Sbjct: 69562 ggtggccgtgatggcggcggcagg 69539


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,506,514
Number of Sequences: 3902068
Number of extensions: 4506514
Number of successful extensions: 143714
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 143281
Number of HSP's gapped (non-prelim): 426
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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