>CB029_HUMAN (Q9UKZ1) Protein C2orf29|
          Length = 510

 Score =  150 bits (380), Expect = 2e-36
 Identities = 87/177 (49%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
 Frame = +2

Query: 44  PDPDIPQSCANSSEISAPESKQKSASDDRDSALVALLQAKSWGRLGPQWIRPTPPRLQIL 223
           PDPD   S  +SS  S               ALV+  +        P++IRP PP L I 
Sbjct: 247 PDPDSSNSGFDSSVAS-----------QITEALVSGPKPPIESHFRPEFIRPPPP-LHIC 294

Query: 224 DGELQWLNP-DNTHELLWDYSMCADTSRGAAIRDLIARALKGPLVPAQQEQVVIELVKDS 400
           + EL WLNP +  H + WD SMC   S G  I+ ++A+A K PL   QQ Q++ EL KD 
Sbjct: 295 EDELAWLNPTEPDHAIQWDKSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDP 354

Query: 401 KLVYHCGMTPQKLPDLVEHNPLIAVELLSKLMNSPDIAGYFDVLVHMEMSLHSMEVV 571
           KLVYH G+TP KLPDLVE+NPL+A+E+L KLM S  I  YF VLV+M+MSLHSMEVV
Sbjct: 355 KLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVV 411

>CB029_MOUSE (Q9CWN7) Protein C2orf29 homolog|
          Length = 505

 Score =  149 bits (376), Expect = 5e-36
 Identities = 76/131 (58%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
 Frame = +2

Query: 182 PQWIRPTPPRLQILDGELQWLNP-DNTHELLWDYSMCADTSRGAAIRDLIARALKGPLVP 358
           P++IRP PP L I + EL WLNP +  H + WD SMC   S G  I+ ++A+A K PL  
Sbjct: 277 PEFIRPPPP-LHICEDELAWLNPTEPEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSS 335

Query: 359 AQQEQVVIELVKDSKLVYHCGMTPQKLPDLVEHNPLIAVELLSKLMNSPDIAGYFDVLVH 538
            QQ Q++ EL KD KLVYH G+TP KLPDLVE+NPL+A+E+L KLM S  I  YF VLV+
Sbjct: 336 PQQTQLLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVN 395

Query: 539 MEMSLHSMEVV 571
           M+MSLHSMEVV
Sbjct: 396 MDMSLHSMEVV 406

>COX1_PARTE (P05489) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide I)
          Length = 645

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 167 MILLGVKQQEQNLYHRKQIFVCFQALISLMNW 72
           M L+G+  + +N+Y    I +C  A I L+NW
Sbjct: 394 MYLVGLDHRSRNIYSTITIMICLPATIKLVNW 425

>SYW_PHOLL (Q7NA61) Tryptophanyl-tRNA synthetase (EC 6.1.1.2)|
           (Tryptophan--tRNA ligase) (TrpRS)
          Length = 345

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 38  AIPDPDIPQSCANSSEISAPESKQKSASDDRDSALVALLQAKS 166
           A+P+P IP   A    +  PE K   + D+R++ +  L   KS
Sbjct: 184 AVPEPFIPTGGARVMALQDPEKKMSKSDDNRNNVIALLEDPKS 226

>GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Granulin-1|
           (Granulin G); Granulin-2 (Granulin F); Granulin-3
           (Granulin B) (Epithelin-2); Granulin-4 (Granulin A)
           (Epithelin-1); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Gran
          Length = 588

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +1

Query: 355 TCSTGASCYRIGEGL*ASLSLWDDSTETSRPC*A*STHCCRASFEAYELSGHCRL 519
           +C  G +C R+  G       W     T   C     HCC A F+ +  +G C L
Sbjct: 286 SCPDGYTCCRLNTGA------WGCCPFTKAVCCEDHIHCCPAGFQCHTETGTCEL 334

>Y514_SYNY3 (Q55470) Hypothetical protein sll0514|
          Length = 554

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +2

Query: 176 LGPQWIRPTPPRLQILDGELQWLNPD 253
           +G ++++PTPP  QI +GE+  L P+
Sbjct: 424 IGDRFVQPTPPPPQIYEGEIHELEPN 449

>CTGF_BOVIN (O18739) Connective tissue growth factor precursor|
          Length = 349

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
 Frame = -2

Query: 552 RLISMCTRTSK*PAMSGEFISFERSSTAMSGLCSTRSGSFC---GVIPQ**TSLESFTNS 382
           +L  +CT         G F  F   +    G+C+ + G+ C   G + Q   S ESF +S
Sbjct: 63  QLSELCTERDPCDPHKGLFCDFGSPANRKIGVCTAKDGAPCVFGGTVYQ---SGESFQSS 119

Query: 381 IT-TCSC*AGTRGPFKALAIKSRIAAP 304
               C+C  G+ G     ++  R+ +P
Sbjct: 120 CKYQCTCLDGSVGCVPLCSVDVRLPSP 146

>ISOA_FLASP (O32611) Isoamylase precursor (EC 3.2.1.68)|
          Length = 777

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 186 WGPNLPHDFAWSKATRAESLSSEAD 112
           WGPN P+D AW+K + A    S+ D
Sbjct: 116 WGPNWPYDAAWTKGS-ATGFVSDVD 139

>DOS_HUMAN (Q8N350) Protein Dos|
          Length = 725

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 77  SSEISAPESKQKSASDDRDSALVALLQAKSWGRLGPQWIRPTPPRLQILDGELQWL 244
           S E+ A  S   S+ +DRDS           G   P +  P+PP  +  DGE + L
Sbjct: 463 SLELHAAASDHSSSGNDRDSVRSGDSSGSGSGGAAPAFPPPSPPAPRPKDGEARRL 518


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,899,367
Number of Sequences: 219361
Number of extensions: 1569169
Number of successful extensions: 5237
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5230
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)