ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29o08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY107573.1| Zea mays PCO077294 mRNA sequence 319 6e-84
2dbj|AK099694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
3dbj|AK059540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 2e-31
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
6emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102... 135 2e-28
7gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence 82 2e-12
8gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
11gb|BT013686.1| Lycopersicon esculentum clone 132509R, mRNA sequence 64 5e-07
12gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, co... 46 0.13
13gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.50
14ref|XM_582695.2| PREDICTED: Bos taurus similar to Protein C2orf2... 40 7.8
15emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on ch... 40 7.8
16gb|AC169833.4| Rhesus Macaque BAC CH250-207J10 (Children's Hosp... 40 7.8
17dbj|AK093090.1| Homo sapiens cDNA FLJ35771 fis, clone TESTI2005085 40 7.8
18gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, co... 40 7.8
19gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chrom... 40 7.8
20emb|BX072537.8| Zebrafish DNA sequence from clone DKEY-15F17, co... 40 7.8
21gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 ... 40 7.8
22gb|AF194984.1|AF194984 Bos grunniens alpha s2 casein gene, promo... 40 7.8
23dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.8
24gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 7.8
25dbj|AP006395.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 7.8
26emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on ch... 40 7.8

>gb|AY107573.1| Zea mays PCO077294 mRNA sequence
          Length = 1110

 Score =  319 bits (161), Expect = 6e-84
 Identities = 302/349 (86%)
 Strand = Plus / Plus

                                                                       
Query: 222 ttgatggggagctacagtggctaaatcctgacaacactcatgagctattatgggattata 281
           |||||||||||||||| ||||| || |||||||| |  || |||||||||||||||||||
Sbjct: 318 ttgatggggagctacaatggctgaaccctgacaataaccacgagctattatgggattata 377

                                                                       
Query: 282 gcatgtgtgctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaa 341
           |||||||||||||||||| ||| |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 378 gcatgtgtgctgacacgaatcgaggggctgctatccgagatttgattgcaagagccttaa 437

                                                                       
Query: 342 aaggtcctcttgtacctgctcaacaggagcaagttgttatagaattggtgaaggactcta 401
           ||||||| |||| ||||  ||||||||||||||| ||  ||||| |||  |||||  |||
Sbjct: 438 aaggtccacttgcacctattcaacaggagcaagtcgtagtagaactggcaaaggatccta 497

                                                                       
Query: 402 agctagtctatcactgtgggatgactccacagaaacttccagaccttgttgagcataatc 461
           | || || ||| | |||||||||||||||||||| ||||| || |||||||| || || |
Sbjct: 498 aactggtttattattgtgggatgactccacagaagcttcctgatcttgttgaacacaacc 557

                                                                       
Query: 462 cactcattgctgtagagcttctttcgaagcttatgaactctccggacattgcaggttatt 521
           ||||||||||||| ||| ||||||| ||||| ||  ||||||| |||||| ||||||| |
Sbjct: 558 cactcattgctgttgaggttctttcaaagctaattcactctcctgacatttcaggttact 617

                                                            
Query: 522 ttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgt 570
           |||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 618 ttgatgttcttgtgcacatggaaatgagcctgcattctatggaagttgt 666



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 92/111 (82%), Gaps = 6/111 (5%)
 Strand = Plus / Plus

                                                                       
Query: 29  gttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcaga---- 84
           |||||| |||||||||| ||||||||  | | |||||||||||| |||||||||||    
Sbjct: 119 gttagaagtgctataccagatccagacgtccgtcaaagttgtgcaaattcatcagagtct 178

                                                              
Query: 85  --gatatcagcgcctgaaagcaaacaaaaatctgcttccgatgatagagat 133
             ||||||| | |||| ||||||||| |||||||| || ||||||||||||
Sbjct: 179 tcgatatcaccacctggaagcaaacagaaatctgcgtctgatgatagagat 229



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>dbj|AK099694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074F01, full
            insert sequence
          Length = 1577

 Score =  145 bits (73), Expect = 2e-31
 Identities = 181/217 (83%)
 Strand = Plus / Plus

                                                                        
Query: 355  acctgctcaacaggagcaagttgttatagaattggtgaaggactctaagctagtctatca 414
            |||||| ||||||||||||||| |  | |||||||  |||||||  |||||||| |||||
Sbjct: 907  acctgcccaacaggagcaagttctggtggaattggcaaaggactggaagctagtttatca 966

                                                                        
Query: 415  ctgtgggatgactccacagaaacttccagaccttgttgagcataatccactcattgctgt 474
             ||||||||||| |||||||| || || |||||||| || |||||||||||| |||||||
Sbjct: 967  ttgtgggatgacaccacagaagctccctgaccttgtggaacataatccactcgttgctgt 1026

                                                                        
Query: 475  agagcttctttcgaagcttatgaactctccggacattgcaggttattttgatgttcttgt 534
             ||  | ||||| ||| | || ||||| || ||||| |  | ||| |||||| |||||||
Sbjct: 1027 tgaagtcctttcaaagttaatcaactcgcctgacatggatgcttactttgatattcttgt 1086

                                                 
Query: 535  gcacatggagatgagcctacattcgatggaagttgta 571
            ||||||||| |||||||||||||| ||||||||||||
Sbjct: 1087 gcacatggaaatgagcctacattcaatggaagttgta 1123



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 95/117 (81%)
 Strand = Plus / Plus

                                                                       
Query: 208 aagacttcagatacttgatggggagctacagtggctaaatcctgacaacactcatgagct 267
           ||||||| | ||||||||||| ||| | |||||||| || |  |||||||  || |||||
Sbjct: 761 aagacttgaaatacttgatggagagttgcagtggctgaacctagacaacaaccacgagct 820

                                                                    
Query: 268 attatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgattt 324
           ||| |||||   ||| ||||||||||| || ||||| || ||||||||||| |||||
Sbjct: 821 attgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagattt 877



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 9   gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaagtt 68
           |||||||||||   |||||||||||| ||| ||| || |||||||||||  ||||||| |
Sbjct: 583 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaagct 642

                                  
Query: 69  gtgccaattcatcagagatatca 91
           |  |  |||||||||||||||||
Sbjct: 643 gcactgattcatcagagatatca 665



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>dbj|AK059540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E08, full
           insert sequence
          Length = 934

 Score =  145 bits (73), Expect = 2e-31
 Identities = 133/153 (86%)
 Strand = Plus / Plus

                                                                       
Query: 419 gggatgactccacagaaacttccagaccttgttgagcataatccactcattgctgtagag 478
           |||||||||||||| || || || ||||||||||| || ||||||||||||||||| || 
Sbjct: 8   gggatgactccacaaaagctccctgaccttgttgaacacaatccactcattgctgttgaa 67

                                                                       
Query: 479 cttctttcgaagcttatgaactctccggacattgcaggttattttgatgttcttgtgcac 538
            ||||||||||  | ||||||||||| |||||||  ||||| || |||||||||||||| 
Sbjct: 68  attctttcgaaattgatgaactctcctgacattgatggttacttagatgttcttgtgcat 127

                                            
Query: 539 atggagatgagcctacattcgatggaagttgta 571
           |||||||||||||| ||||| ||||||||||||
Sbjct: 128 atggagatgagcctgcattctatggaagttgta 160



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                           
Query: 231     agctacagtggctaaatcctgacaacactcatgagctattatgggattatagcatgtgtg 290
               ||||||| ||| | || |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 5064889 agctacaatggttgaaccctgacaacaatcacgagctattatgggattatagcatgtgtg 5064948

                                                                           
Query: 291     ctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaaaaggtcctc 350
               ||||||| ||||| || ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 5064949 ctgacacaagtcgaggtgctgctattcgagatttgattgcaagagccttaaaaggtccac 5065008

                       
Query: 351     ttgtacct 358
               ||| ||||
Sbjct: 5065009 ttgcacct 5065016



 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                           
Query: 103     caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 162
               ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 5064675 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 5064734

                                              
Query: 163     atcatggggaagattgggtccccaatggata 193
               ||||||||||||||||||||| |||||||||
Sbjct: 5064735 atcatggggaagattgggtccgcaatggata 5064765



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                           
Query: 26      actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 85
               |||||||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||
Sbjct: 5064489 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 5064548



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                               
Query: 524     gatgttcttgtgcacatggagatgagcctacattcgatggaagttgta 571
               |||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 5065622 gatgttcttgtgcatatggagatgagcctgcattctatggaagttgta 5065669



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 443     gaccttgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactct 502
               ||||||||||| || ||||||||||||||||| ||  ||||||||||  | |||||||||
Sbjct: 5065454 gaccttgttgaacacaatccactcattgctgttgaaattctttcgaaattgatgaactct 5065513

                         
Query: 503     ccggacattg 512
               || |||||||
Sbjct: 5065514 cctgacattg 5065523



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                           
Query: 369     agcaagttgttatagaattggtgaaggactctaagctagtctatcactgtgggatgactc 428
               ||||||| || |||||| |||  |||||||| ||| | || ||||| || ||||||||||
Sbjct: 5065273 agcaagtcgtaatagaactggcaaaggactcgaagttggtgtatcattgcgggatgactc 5065332

                   
Query: 429     caca 432
               ||||
Sbjct: 5065333 caca 5065336



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                           
Query: 231     agctacagtggctaaatcctgacaacactcatgagctattatgggattatagcatgtgtg 290
               ||||||| ||| | || |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 5064871 agctacaatggttgaaccctgacaacaatcacgagctattatgggattatagcatgtgtg 5064930

                                                                           
Query: 291     ctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaaaaggtcctc 350
               ||||||| ||||| || ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 5064931 ctgacacaagtcgaggtgctgctattcgagatttgattgcaagagccttaaaaggtccac 5064990

                       
Query: 351     ttgtacct 358
               ||| ||||
Sbjct: 5064991 ttgcacct 5064998



 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                           
Query: 103     caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 162
               ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 5064657 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 5064716

                                              
Query: 163     atcatggggaagattgggtccccaatggata 193
               ||||||||||||||||||||| |||||||||
Sbjct: 5064717 atcatggggaagattgggtccgcaatggata 5064747



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                           
Query: 26      actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 85
               |||||||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||
Sbjct: 5064471 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 5064530



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                               
Query: 524     gatgttcttgtgcacatggagatgagcctacattcgatggaagttgta 571
               |||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 5065604 gatgttcttgtgcatatggagatgagcctgcattctatggaagttgta 5065651



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                           
Query: 443     gaccttgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactct 502
               ||||||||||| || ||||||||||||||||| ||  ||||||||||  | |||||||||
Sbjct: 5065436 gaccttgttgaacacaatccactcattgctgttgaaattctttcgaaattgatgaactct 5065495

                         
Query: 503     ccggacattg 512
               || |||||||
Sbjct: 5065496 cctgacattg 5065505



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                           
Query: 369     agcaagttgttatagaattggtgaaggactctaagctagtctatcactgtgggatgactc 428
               ||||||| || |||||| |||  |||||||| ||| | || ||||| || ||||||||||
Sbjct: 5065255 agcaagtcgtaatagaactggcaaaggactcgaagttggtgtatcattgcgggatgactc 5065314

                   
Query: 429     caca 432
               ||||
Sbjct: 5065315 caca 5065318



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>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112231

 Score =  135 bits (68), Expect = 2e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                         
Query: 231   agctacagtggctaaatcctgacaacactcatgagctattatgggattatagcatgtgtg 290
             ||||||| ||| | || |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 35542 agctacaatggttgaaccctgacaacaatcacgagctattatgggattatagcatgtgtg 35601

                                                                         
Query: 291   ctgacacgagtcgtggggctgcgatccgtgatttgattgcgagagccttaaaaggtcctc 350
             ||||||| ||||| || ||||| || || ||||||||||| ||||||||||||||||| |
Sbjct: 35602 ctgacacaagtcgaggtgctgctattcgagatttgattgcaagagccttaaaaggtccac 35661

                     
Query: 351   ttgtacct 358
             ||| ||||
Sbjct: 35662 ttgcacct 35669



 Score =  125 bits (63), Expect = 2e-25
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                         
Query: 103   caaacaaaaatctgcttccgatgatagagattctgctcttgttgctttactccaagcaaa 162
             ||||| |||||||||||| ||||||||||||| |||||||| || ||||||||||| |||
Sbjct: 35328 caaaccaaaatctgcttctgatgatagagattttgctcttgctggtttactccaagaaaa 35387

                                            
Query: 163   atcatggggaagattgggtccccaatggata 193
             ||||||||||||||||||||| |||||||||
Sbjct: 35388 atcatggggaagattgggtccgcaatggata 35418



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                         
Query: 26    actgttagatgtgctataccggatccagatatacctcaaagttgtgccaattcatcagag 85
             |||||||||||||||||||||||||||||| |||||||||| ||||  ||||| ||||||
Sbjct: 35142 actgttagatgtgctataccggatccagatgtacctcaaagctgtgtaaattcgtcagag 35201



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                             
Query: 524   gatgttcttgtgcacatggagatgagcctacattcgatggaagttgta 571
             |||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 36275 gatgttcttgtgcatatggagatgagcctgcattctatggaagttgta 36322



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                         
Query: 443   gaccttgttgagcataatccactcattgctgtagagcttctttcgaagcttatgaactct 502
             ||||||||||| || ||||||||||||||||| ||  ||||||||||  | |||||||||
Sbjct: 36107 gaccttgttgaacacaatccactcattgctgttgaaattctttcgaaattgatgaactct 36166

                       
Query: 503   ccggacattg 512
             || |||||||
Sbjct: 36167 cctgacattg 36176



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 369   agcaagttgttatagaattggtgaaggactctaagctagtctatcactgtgggatgactc 428
             ||||||| || |||||| |||  |||||||| ||| | || ||||| || ||||||||||
Sbjct: 35926 agcaagtcgtaatagaactggcaaaggactcgaagttggtgtatcattgcgggatgactc 35985

                 
Query: 429   caca 432
             ||||
Sbjct: 35986 caca 35989



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>gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence
          Length = 1802

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 143/177 (80%)
 Strand = Plus / Plus

                                                                        
Query: 391  gaaggactctaagctagtctatcactgtgggatgactccacagaaacttccagaccttgt 450
            ||||||||  |||||||| ||||| ||||| ||||| |||||||| || || || |||||
Sbjct: 902  gaaggactggaagctagtttatcattgtggaatgacaccacagaagctccctgatcttgt 961

                                                                        
Query: 451  tgagcataatccactcattgctgtagagcttctttcgaagcttatgaactctccggacat 510
            ||| ||||||||||  || ||||| ||  ||||||| ||||| || ||||||||||||||
Sbjct: 962  tgaacataatccacatatagctgttgaagttctttcaaagctaatcaactctccggacat 1021

                                                                     
Query: 511  tgcaggttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagt 567
             |  |  || ||||||| | |||| || ||||| |||||| | ||||| ||||||||
Sbjct: 1022 ggatgcgtactttgatgctattgttcatatggatatgagcttgcattcaatggaagt 1078



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>gb|AC137993.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0122P24, complete sequence
          Length = 136104

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 52/56 (92%)
 Strand = Plus / Minus

                                                                     
Query: 516   gttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgta 571
             |||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 26477 gttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagttgta 26422



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 383   gaattggtgaaggactctaagctagtctatcactgtgggatgactccacagaa 435
             |||||||  |||||||  |||||||| ||||| ||||||||||| ||||||||
Sbjct: 26792 gaattggcaaaggactggaagctagtttatcattgtgggatgacaccacagaa 26740



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 9     gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 66
             |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 35390 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 35333



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 263   gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 322
             |||||||| |||||   ||| ||||||||||| || ||||| || ||||||||||| |||
Sbjct: 34968 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 34909

               
Query: 323   tt 324
             ||
Sbjct: 34908 tt 34907



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 443   gaccttgttgagcataatccactcattgctgt 474
             |||||||| || |||||||||||| |||||||
Sbjct: 26658 gaccttgtggaacataatccactcgttgctgt 26627



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                       
Query: 516     gttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgta 571
               |||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 7444321 gttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagttgta 7444376



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 383     gaattggtgaaggactctaagctagtctatcactgtgggatgactccacagaa 435
               |||||||  |||||||  |||||||| ||||| ||||||||||| ||||||||
Sbjct: 7444006 gaattggcaaaggactggaagctagtttatcattgtgggatgacaccacagaa 7444058



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 263     gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 322
               |||||||| |||||   ||| ||||||||||| || ||||| || ||||||||||| |||
Sbjct: 7435830 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 7435889

                 
Query: 323     tt 324
               ||
Sbjct: 7435890 tt 7435891



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 9       gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 66
               |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 7435408 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 7435465



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 443     gaccttgttgagcataatccactcattgctgt 474
               |||||||| || |||||||||||| |||||||
Sbjct: 7444140 gaccttgtggaacataatccactcgttgctgt 7444171



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                       
Query: 516     gttattttgatgttcttgtgcacatggagatgagcctacattcgatggaagttgta 571
               |||| |||||| |||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 7514407 gttactttgatattcttgtgcacatggaaatgagcctacattcaatggaagttgta 7514462



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 383     gaattggtgaaggactctaagctagtctatcactgtgggatgactccacagaa 435
               |||||||  |||||||  |||||||| ||||| ||||||||||| ||||||||
Sbjct: 7514092 gaattggcaaaggactggaagctagtttatcattgtgggatgacaccacagaa 7514144



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                           
Query: 263     gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 322
               |||||||| |||||   ||| ||||||||||| || ||||| || ||||||||||| |||
Sbjct: 7505916 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 7505975

                 
Query: 323     tt 324
               ||
Sbjct: 7505976 tt 7505977



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                         
Query: 9       gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 66
               |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 7505494 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 7505551



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 443     gaccttgttgagcataatccactcattgctgt 474
               |||||||| || |||||||||||| |||||||
Sbjct: 7514226 gaccttgtggaacataatccactcgttgctgt 7514257



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>gb|BT013686.1| Lycopersicon esculentum clone 132509R, mRNA sequence
          Length = 1534

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 320 gatttgattgcgagagccttaaaaggtcctcttgtacctgctcaacaggagcaagt 375
           ||||||||||| | |||  |||||||||| ||||||||||||||||| ||||||||
Sbjct: 834 gatttgattgcaaaagctctaaaaggtccacttgtacctgctcaacaagagcaagt 889



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 539  atggagatgagcctacattcgatggaagttgt 570
            ||||||||||| || ||||| |||||||||||
Sbjct: 1053 atggagatgagtcttcattctatggaagttgt 1084



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>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence
          Length = 214994

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 428    ccacagaaacttccagaccttgt 450
              |||||||||||||||||||||||
Sbjct: 143873 ccacagaaacttccagaccttgt 143895



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>gb|AC083751.6| Genomic sequence for Oryza sativa, Nipponbare strain, clone
            OSJNBa0042K08, from chromosome 2, complete sequence
          Length = 164628

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 9    gtagtttcagaagcgctactgttagatgtgctataccggatccagatatacctcaaag 66
            |||||||||||   |||||||||||| ||| ||| || |||||||||||  |||||||
Sbjct: 4070 gtagtttcagagaagctactgttagaagtgttattcctgatccagatatttctcaaag 4013



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 263  gagctattatgggattatagcatgtgtgctgacacgagtcgtggggctgcgatccgtgat 322
            |||||||| |||||   ||| ||||||||||| || ||||| || ||||||||||| |||
Sbjct: 3648 gagctattgtgggacagtagtatgtgtgctgatactagtcgaggtgctgcgatccgagat 3589

              
Query: 323  tt 324
            ||
Sbjct: 3588 tt 3587



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>ref|XM_582695.2| PREDICTED: Bos taurus similar to Protein C2orf29 (LOC506268),
           partial mRNA
          Length = 1881

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 tacattcgatggaagttgta 571
           ||||||||||||||||||||
Sbjct: 840 tacattcgatggaagttgta 859



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>emb|AL591065.17| Mouse DNA sequence from clone RP23-199H17 on chromosome 11 Contains the
              Myo18a gene for myosin XVIIIa, the Pipox gene for pipecolic
              acid oxidase, a novel gene (LOC327969), the 5' end of the
              Sez6 gene for seizure related gene 6 and two CpG islands,
              complete sequence
          Length = 220176

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gagattctgctcttgttgct 148
              ||||||||||||||||||||
Sbjct: 117571 gagattctgctcttgttgct 117590



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>gb|AC169833.4| Rhesus Macaque  BAC CH250-207J10 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 187311

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gatatacctcaaagttgtgc 72
              ||||||||||||||||||||
Sbjct: 112432 gatatacctcaaagttgtgc 112413



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>dbj|AK093090.1| Homo sapiens cDNA FLJ35771 fis, clone TESTI2005085
          Length = 2087

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 373  agttgttatagaattggtga 392
            ||||||||||||||||||||
Sbjct: 1367 agttgttatagaattggtga 1386



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>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence
          Length = 177819

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    attctgctcttgttgcttta 151
              ||||||||||||||||||||
Sbjct: 125236 attctgctcttgttgcttta 125255



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>gb|AC164657.4| Pan troglodytes BAC clone CH251-389C15 from chromosome unknown, complete
              sequence
          Length = 182992

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gatatacctcaaagttgtgc 72
              ||||||||||||||||||||
Sbjct: 171348 gatatacctcaaagttgtgc 171329



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>emb|BX072537.8| Zebrafish DNA sequence from clone DKEY-15F17, complete sequence
          Length = 226685

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   attgcaggttattttgatgt 528
             ||||||||||||||||||||
Sbjct: 57428 attgcaggttattttgatgt 57447



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>gb|AC004672.1|AC004672 Homo sapiens 12p13.3-0-2.7 BAC RP5-951N9 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 85420

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 373   agttgttatagaattggtga 392
             ||||||||||||||||||||
Sbjct: 64997 agttgttatagaattggtga 65016



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>gb|AF194984.1|AF194984 Bos grunniens alpha s2 casein gene, promoter region and exon 1
          Length = 990

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 66  gttgtgccaattcatcagagatat 89
           ||||||||||| ||||||||||||
Sbjct: 888 gttgtgccaatccatcagagatat 911



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>dbj|AP003025.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-217L21, complete
              sequence
          Length = 193828

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gatatacctcaaagttgtgc 72
              ||||||||||||||||||||
Sbjct: 173502 gatatacctcaaagttgtgc 173483



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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 308     gctgcgatccgtgatttgat 327
               ||||||||||||||||||||
Sbjct: 1824534 gctgcgatccgtgatttgat 1824515



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>dbj|AP006395.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT26P21, TM0279a,
             complete sequence
          Length = 61586

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    cctgaaagcaaacaaaaatc 114
             ||||||||||||||||||||
Sbjct: 12471 cctgaaagcaaacaaaaatc 12490



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>emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on chromosome 2, complete
              sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 511    tgcaggttattttgatgttcttgt 534
              |||||||||||||||| |||||||
Sbjct: 105310 tgcaggttattttgattttcttgt 105287


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,584,941
Number of Sequences: 3902068
Number of extensions: 4584941
Number of successful extensions: 90848
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90647
Number of HSP's gapped (non-prelim): 198
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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