Clone Information

BLAST Search Result

Clone Name	bags29n18
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	226	2e-59
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	225	5e-59
3	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	197	2e-50
4	RL5_ARATH (P49227) 60S ribosomal protein L5	187	1e-47
5	RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)	162	6e-40
6	RL5_BOMMO (O76190) 60S ribosomal protein L5	122	8e-28
7	RL5_STYCL (Q26481) 60S ribosomal protein L5	118	9e-27
8	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	117	2e-26
9	RL5_HELAN (O65353) 60S ribosomal protein L5	116	5e-26
10	RL5_CAEEL (P49405) 60S ribosomal protein L5	114	1e-25
11	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	114	2e-25
12	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	113	4e-25
13	RL5_DUNSA (O22608) 60S ribosomal protein L5	113	4e-25
14	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	112	7e-25
15	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	112	7e-25
16	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	112	9e-25
17	RL5_HUMAN (P46777) 60S ribosomal protein L5	112	9e-25
18	RL5_RAT (P09895) 60S ribosomal protein L5	111	1e-24
19	RL5_MOUSE (P47962) 60S ribosomal protein L5	111	1e-24
20	RL5_CHICK (P22451) 60S ribosomal protein L5	111	1e-24
21	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	102	7e-22
22	RL5_ANOGA (O44248) 60S ribosomal protein L5	101	1e-21
23	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	45	1e-04
24	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	42	8e-04
25	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	42	0.001
26	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	42	0.001
27	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	41	0.002
28	RL18_METJA (P54044) 50S ribosomal protein L18P	40	0.003
29	RL18_PYRHO (O59438) 50S ribosomal protein L18P	40	0.005
30	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	40	0.005
31	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	39	0.007
32	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	39	0.007
33	RL18_METVA (P14033) 50S ribosomal protein L18P	34	0.30
34	ZN674_HUMAN (Q2M3X9) Zinc finger protein 674	33	0.39
35	RL18_METTH (O26130) 50S ribosomal protein L18P	33	0.67
36	RL18_SULAC (O05640) 50S ribosomal protein L18P	32	1.5
37	SRYD_DROME (P07664) Serendipity locus protein delta	31	1.9
38	UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstrea...	30	3.3
39	CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (S...	30	4.3
40	SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subun...	30	4.3
41	NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (At...	30	4.3
42	ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (E...	30	5.6
43	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	30	5.6
44	VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein ...	30	5.6
45	ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein ...	29	7.4
46	PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase ...	29	7.4
47	GIDA_BORGA (Q662I6) tRNA uridine 5-carboxymethylaminomethyl modi...	29	7.4
48	UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstrea...	29	7.4
49	CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Sol...	29	7.4
50	Y1664_METJA (Q59058) Hypothetical protein MJ1664	29	9.6
51	TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1 (Transc...	29	9.6
52	ITB6_HUMAN (P18564) Integrin beta-6 precursor	29	9.6
53	OAF1_YEAST (P39720) Oleate-activated transcription factor 1	29	9.6
54	NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated prote...	29	9.6

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  226 bits (577), Expect = 2e-59
 Identities = 110/140 (78%), Positives = 120/140 (85%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGNRVF            IPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+E
Sbjct: 155 TGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEE 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           EPEK+Q HFSEY+KKGI AD MEA+YKKVHAAIRADP+MAKSTK  P THKRYN KKLTY
Sbjct: 215 EPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTY 274

Query: 363 EERKASLVERLNALNNSAGA 422
           E+RKASLVERLNALN+SAGA
Sbjct: 275 EQRKASLVERLNALNSSAGA 294

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  225 bits (574), Expect = 5e-59
 Identities = 109/140 (77%), Positives = 120/140 (85%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGNRVF            IPHSDKRFAGFKKDEK LD++IHRKYIYGGHVADYMRS+A+E
Sbjct: 155 TGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEE 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           EPEK+Q HFSEY+KKGI AD ME++YKKVHAAIRADP+MAKSTK  P THKRYN KKLTY
Sbjct: 215 EPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTY 274

Query: 363 EERKASLVERLNALNNSAGA 422
           E+RKASLVERLNALN+SAGA
Sbjct: 275 EQRKASLVERLNALNSSAGA 294

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  197 bits (501), Expect = 2e-50
 Identities = 94/138 (68%), Positives = 110/138 (79%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGNRVF            IPHSDKRFAG+ K+ + LD E+HRKYI+GGHVA YMR+L ++
Sbjct: 154 TGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMED 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           EPEKYQ+HFSEYIKKGI AD++E +YKKVHAAIRA+P   KS KP PK HKRYN KKLTY
Sbjct: 214 EPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTY 273

Query: 363 EERKASLVERLNALNNSA 416
           +ERKA LVERLNALN++A
Sbjct: 274 DERKARLVERLNALNSAA 291

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  187 bits (476), Expect = 1e-47
 Identities = 89/139 (64%), Positives = 105/139 (75%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGNRVF            IPHSDKRFAGF K+ K LDAEIHR YIYGGHV++YM+ L ++
Sbjct: 154 TGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGED 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           EPEK QTHFS YIKKG+ A+ +E +YKKVHAAIRA+P+  K+ K APK HKRYN KKLTY
Sbjct: 214 EPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTY 273

Query: 363 EERKASLVERLNALNNSAG 419
           EERK  L+ER+ ALN + G
Sbjct: 274 EERKNKLIERVKALNGAGG 292

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>RL5_SOLME (P93779) 60S ribosomal protein L5 (Fragment)|
          Length = 121

 Score =  162 bits (410), Expect = 6e-40
 Identities = 77/109 (70%), Positives = 88/109 (80%)
 Frame = +3

Query: 93  KDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH 272
           KD K LDAE+HRKYIYGGHVA YM  L ++EPEKYQ+HFS YIK  ++ D++E +YKKVH
Sbjct: 3   KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVH 62

Query: 273 AAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNALNNSAG 419
           AAIR DPS  KS K  PKTHKRYN KKLTYEERKA L+ERLNALN + G
Sbjct: 63  AAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALNAAGG 111

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  122 bits (305), Expect = 8e-28
 Identities = 64/141 (45%), Positives = 86/141 (60%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG RVF            +PHS KRF G+  + K  +AE+HR +I+G HVA+YMRSL  +
Sbjct: 155 TGRRVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQD 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPS-MAKSTKPAPKTHKRYNPKKLT 359
           + + ++  FS+YIK G++AD +EA+YKK H AIRADPS   K  K      KR+N +KLT
Sbjct: 215 DEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLT 274

Query: 360 YEER-------KASLVERLNA 401
             ER       KAS ++RL A
Sbjct: 275 LAERKNRIKQKKASFIKRLQA 295

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  118 bits (296), Expect = 9e-27
 Identities = 56/124 (45%), Positives = 80/124 (64%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG +VF            IPHS KRF G+  +     AE+HR +I+GGHV++YM+ L +E
Sbjct: 154 TGAKVFGAMKGAADGGLDIPHSTKRFPGYDDESGDFSAEVHRSHIFGGHVSNYMKELEEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + E ++  FS+YIK G++AD +E +Y K HAAIR DP+  K T  A KT KR+N KK+T+
Sbjct: 214 DEEAFKRQFSQYIKHGVTADTVEEMYTKAHAAIREDPTPKKKTDFAGKT-KRWNRKKMTF 272

Query: 363 EERK 374
            +R+
Sbjct: 273 SQRR 276

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  117 bits (293), Expect = 2e-26
 Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 8/144 (5%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG RVF            IPHS+ RF G+  + + LDAE  +KYI+GGHVA+YM +LAD+
Sbjct: 158 TGARVFGAMKGASDGGIFIPHSENRFPGYDMESEELDAETLKKYIFGGHVAEYMETLADD 217

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHK--------R 338
           + E+Y++ F+ YI+  + AD +E +Y + HAAIR DP   K+   APK  K        +
Sbjct: 218 DEERYKSQFNRYIEDDLEADGLEDLYAEAHAAIREDP-FKKAESEAPKKTKEEWKAESLK 276

Query: 339 YNPKKLTYEERKASLVERLNALNN 410
           Y   KLT E+R A + ER+ AL +
Sbjct: 277 YKKSKLTREQRAAGVQERIAALRS 300

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  116 bits (290), Expect = 5e-26
 Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG RVF            I HS KRF GF  + K  +A++HR++I+G HVA+YMR LA+E
Sbjct: 155 TGARVFGAMKGAVDGGLNILHSTKRFPGFDSESKEFNADVHRQHIFGQHVAEYMRQLAEE 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA-PKTHKRYNPKKLT 359
           + E Y+  FS+YIK G++AD +E +YKK H AIRA+P+     K A PK  KR+  KKLT
Sbjct: 215 DDEAYKRQFSQYIKLGLNADAIEGLYKKAHEAIRANPARKTVAKKAHPK--KRWTEKKLT 272

Query: 360 YEERKASL 383
            E+R+  +
Sbjct: 273 REQRQGKV 280

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  114 bits (286), Expect = 1e-25
 Identities = 55/130 (42%), Positives = 83/130 (63%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG+++F            +PHS+ RF GF ++ K  +AE HR  I G HVADYM  L +E
Sbjct: 154 TGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + ++Y+  FS+++  G++AD++ A Y+KVH+AIRAD S A   K A K  KR+  K+LTY
Sbjct: 214 DEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPA--AKKAAKPSKRHTAKRLTY 271

Query: 363 EERKASLVER 392
           +ERK  + ++
Sbjct: 272 DERKQRVADK 281

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  114 bits (285), Expect = 2e-25
 Identities = 66/144 (45%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG+RVF            IPHS  RF GF  + + LD E  RKYIYGGHVA+YM  L D+
Sbjct: 155 TGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDD 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKK 353
           + E+YQ  FS  I  GI +D +E +Y + +A IR DPS  KS K A        +Y  +K
Sbjct: 215 DEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKYTQRK 274

Query: 354 LTYEERKASLVERLNALNNSAGAA 425
           LT EERK    ER NA    AG A
Sbjct: 275 LTAEERK----ERFNAKVIEAGRA 294

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  113 bits (282), Expect = 4e-25
 Identities = 53/130 (40%), Positives = 80/130 (61%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  + E+HRK+I+  ++A+YMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNIAEYMRLLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK G++AD +E +YKK HA IR +P   K  K   K  KR+N  KL+ 
Sbjct: 214 DEDAYKKQFSQYIKNGVAADQLEDIYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSL 272

Query: 363 EERKASLVER 392
           E++K  + ++
Sbjct: 273 EQKKDRVAQK 282

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  113 bits (282), Expect = 4e-25
 Identities = 52/116 (44%), Positives = 74/116 (63%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG++VF            IPH++KRF G+   +K LD E+ +KYIYGGHVA+Y  ++ +E
Sbjct: 155 TGSKVFAAMKGALDGGLDIPHNEKRFVGYA--DKKLDTEVLQKYIYGGHVAEYQETMQEE 212

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPK 350
           EPEKYQ HFS Y++  I  D +E +YK+VHA IR +P   K  +  P   KR++P+
Sbjct: 213 EPEKYQAHFSSYVENEIEPDGIEDMYKEVHAKIRENPCPPKKERTKPADAKRWSPQ 268

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  112 bits (280), Expect = 7e-25
 Identities = 54/130 (41%), Positives = 80/130 (61%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  + E+HRK+I+  +VA+YMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNPEVHRKHIFAQNVAEYMRLLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK G++AD +E +YKK HA IR +P   K  K   K  KR+N  KL+ 
Sbjct: 214 DEDAYKKQFSQYIKNGVTADQVEDLYKKAHAGIRENPVHEKKPKKEVK-KKRWNRAKLSL 272

Query: 363 EERKASLVER 392
           E++K  + ++
Sbjct: 273 EQKKDRVAQK 282

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  112 bits (280), Expect = 7e-25
 Identities = 65/144 (45%), Positives = 80/144 (55%), Gaps = 3/144 (2%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG+RVF            IPHS  RF GF  + + LD E  RKYIYGGHVA+YM  L D+
Sbjct: 155 TGSRVFGAMKGASDGGLFIPHSPNRFPGFDIETEELDDETLRKYIYGGHVAEYMEMLIDD 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPA---PKTHKRYNPKK 353
           + E+YQ  FS  I  GI +D +E +Y + +A IR DPS  KS K A        ++  +K
Sbjct: 215 DEERYQKQFSGLIADGIESDQLEDIYAEAYAKIREDPSFQKSGKDAAAFKAESLKHTQRK 274

Query: 354 LTYEERKASLVERLNALNNSAGAA 425
           LT EERK    ER NA    AG A
Sbjct: 275 LTAEERK----ERFNAKVIEAGRA 294

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  112 bits (279), Expect = 9e-25
 Identities = 55/130 (42%), Positives = 79/130 (60%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N  K++ 
Sbjct: 214 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSL 272

Query: 363 EERKASLVER 392
            ++K  + ++
Sbjct: 273 AQKKDRVAQK 282

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  112 bits (279), Expect = 9e-25
 Identities = 55/130 (42%), Positives = 79/130 (60%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N  K++ 
Sbjct: 214 DEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKKPKKEVK-KKRWNRPKMSL 272

Query: 363 EERKASLVER 392
            ++K  + ++
Sbjct: 273 AQKKDRVAQK 282

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  111 bits (278), Expect = 1e-24
 Identities = 55/130 (42%), Positives = 79/130 (60%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N  K++ 
Sbjct: 214 DEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSL 272

Query: 363 EERKASLVER 392
            ++K  + ++
Sbjct: 273 AQKKDRVAQK 282

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  111 bits (278), Expect = 1e-24
 Identities = 55/130 (42%), Positives = 79/130 (60%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK  ++ D ME +YKK HAAIR +P   K  K   K  KR+N  K++ 
Sbjct: 214 DEDAYKKQFSQYIKNNVTPDMMEEMYKKAHAAIRENPVYEKKPKREVK-KKRWNRPKMSL 272

Query: 363 EERKASLVER 392
            ++K  + ++
Sbjct: 273 AQKKDRVAQK 282

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  111 bits (277), Expect = 1e-24
 Identities = 56/130 (43%), Positives = 78/130 (60%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TGN+VF            IPHS KRF G+  + K  +AE+HRK+I G +VADYMR L +E
Sbjct: 154 TGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEE 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTY 362
           + + Y+  FS+YIK  I+ D ME +YKK HAAIR +P   K  K   K  KR N  K++ 
Sbjct: 214 DEDAYKKQFSQYIKNNITPDGMEEMYKKAHAAIRDNPVHEKKPKREVK-KKRVNSTKMSL 272

Query: 363 EERKASLVER 392
            ++K  + ++
Sbjct: 273 AQKKDRVAQK 282

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  102 bits (254), Expect = 7e-22
 Identities = 52/139 (37%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG RVF            +PHS+ RF G+  + + +D E+ R YI+GGHV+ YM  LAD+
Sbjct: 154 TGARVFGALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELADD 213

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTH-----KRYNP 347
           + E++   F  Y+   I AD +E +Y   H AIRADP+   + K   K       K+Y  
Sbjct: 214 DEERFSELFKGYLADDIDADSLEDIYTSAHEAIRADPAFKPTEKKFTKEQYAAESKKYRQ 273

Query: 348 KKLTYEERKASLVERLNAL 404
            KL+ EER A +  ++ AL
Sbjct: 274 TKLSKEERAARVAAKIAAL 292

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  101 bits (252), Expect = 1e-21
 Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
 Frame = +3

Query: 3   TGNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADE 182
           TG+RVF            IPHS KRF G+  + KS +AE+HR +I+G HVA+YMR+L +E
Sbjct: 155 TGSRVFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEE 214

Query: 183 EPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIR-ADPSMAKSTKPAPKTHKRY 341
           + E ++  FS+YI  GI ADD+E +YK  HA+IR   PS     + +P++  R+
Sbjct: 215 DEEAFKRQFSKYISLGIKADDIENIYKNAHASIRKIPPSRRNPRRRSPRSGGRW 268

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 25/95 (26%), Positives = 47/95 (49%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+RVF            IPH           E+ L  E     I G H+A+  R + +E+
Sbjct: 117 GSRVFAMLKGALDAGMDIPHG----------EEVLPPEDR---IRGEHIANLARQIKEED 163

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRAD 290
           PE+Y+  FS+Y+++G+  +++   +++V + I  +
Sbjct: 164 PEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 26/92 (28%), Positives = 40/92 (43%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G RVF            IPH ++       DE           I G HVA+Y   L +E 
Sbjct: 113 GARVFAVLKGALDAGLKIPHGEEVLP----DEDR---------IKGKHVAEYAEKLKEEN 159

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
           PE Y+  FS Y+++G+  + +   +++V   I
Sbjct: 160 PEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191

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>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/92 (27%), Positives = 43/92 (46%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+RVF            IPHS++   G   DE+          +   H+A +  +L +E 
Sbjct: 114 GSRVFAALKGALDAGVEIPHSEEILPG---DER----------VRCEHIAQWAEALKEEN 160

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
            E YQ  FS Y+ +G++ +++    ++V  AI
Sbjct: 161 AELYQRQFSRYLDRGLNPEELPGHVEEVKKAI 192

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/92 (27%), Positives = 43/92 (46%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+ VF            +PHS + F            E +R  I G H+A+Y R L +++
Sbjct: 114 GSSVFAVLKGAVDAGLNVPHSPEIFP-----------EDYR--IRGEHIAEYARMLKEQD 160

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
            EK++  F  Y++KG+  + +   + +V A I
Sbjct: 161 EEKFRRQFGGYLEKGLDPEKLPEHFDEVKARI 192

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+R+F            IP  D    G K+D            I G H+A Y + L  E 
Sbjct: 114 GSRIFTAIKGAIDAGLSIPVGD---LGIKEDR-----------IKGVHIASYAQKLEAEN 159

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRA 287
           PE ++  FS+Y+++G+   D+ + ++++   I++
Sbjct: 160 PELFKRLFSKYLERGLHPKDLPSHFEEILNKIKS 193

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 23/92 (25%), Positives = 43/92 (46%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           GN +F            IPH           E+ L +E   + I G H+  Y   L +++
Sbjct: 113 GNAIFAILKGALDAGMEIPHG----------EEILPSE---ERIRGEHIKAYAEMLKEQD 159

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
            E+Y+  FS+Y++KG+  + +   ++++ A I
Sbjct: 160 EERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 22/92 (23%), Positives = 44/92 (47%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+ +F            +PHS + F            E +R  I G H+A+Y R L +++
Sbjct: 114 GSSIFAVLKGAIDAGLNVPHSPEIFP-----------EDYR--IRGEHIAEYARMLKEQD 160

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
            ++++  F  Y++KG+  + +   +++V A I
Sbjct: 161 EDRFRRQFGGYLEKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 24/92 (26%), Positives = 42/92 (45%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+ VF            +PHS + F     DE           I G H+A+Y + L +++
Sbjct: 114 GSSVFAVLKGAVDAGLNVPHSPEIFP----DEYR---------IRGEHIAEYAKMLKEQD 160

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
            EK++  F  Y+ KG+  + +   +++V A I
Sbjct: 161 EEKFRRQFGGYLVKGLDPEKLPEHFEEVKARI 192

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 23/92 (25%), Positives = 44/92 (47%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G+ +F            +PHS++ +            E +R  I G H+A+Y ++L +E+
Sbjct: 114 GSSIFAVLKGAVDAGLNVPHSEEIYP-----------EDYR--INGEHIANYAKALKEED 160

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
              Y+  FS Y+ KG+  + +   +++V A I
Sbjct: 161 EALYRKQFSGYLVKGLEPEKLPEHFEEVKAKI 192

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 25/81 (30%), Positives = 39/81 (48%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G  +F            IPH DK  A    DE+ L+         G HV +Y  SL  E+
Sbjct: 113 GAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTHVKNYAESLK-ED 158

Query: 186 PEKYQTHFSEYIKKGISADDM 248
            + Y+  FS+Y++KG++ +D+
Sbjct: 159 ADAYKKQFSKYLEKGLNPEDL 179

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 33.9 bits (76), Expect = 0.30
 Identities = 14/47 (29%), Positives = 29/47 (61%)
 Frame = +3

Query: 141 GGHVADYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
           G H+  Y   L ++E E Y+  FS+Y++KG++ +D+   ++++   I
Sbjct: 147 GTHIKQYAELLKEDE-EAYKKQFSKYLEKGLNPEDLPEHFEELKGKI 192

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>ZN674_HUMAN (Q2M3X9) Zinc finger protein 674|
          Length = 581

 Score = 33.5 bits (75), Expect = 0.39
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 198 QTHFSEYIKKGISADDMEAVYKKVHAAIR---ADPSMAKSTKPAPKTHKRYNPKKLTYE 365
           +TH  +   KGI       +Y+++H + +   ++   A   KP+P  H R + K+  YE
Sbjct: 328 KTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCSEHGKASDEKPSPTKHWRTHTKENIYE 386

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 23/92 (25%), Positives = 39/92 (42%)
 Frame = +3

Query: 6   GNRVFXXXXXXXXXXXXIPHSDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEE 185
           G++VF            +PH +        DE           I G H+ +Y  SL +EE
Sbjct: 113 GSKVFAALKGAVDAGLNVPHGESVLP----DESR---------IRGEHIMEYAESLDEEE 159

Query: 186 PEKYQTHFSEYIKKGISADDMEAVYKKVHAAI 281
             K    FS+Y+++G+S  D+   + ++   I
Sbjct: 160 LRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 135 IYGGHVADYMRSLADEEPEKYQTHFSEYIKKGI 233
           + G H++ Y + L +E  E Y   FS YI++G+
Sbjct: 143 VNGSHISAYAQKLKNENQELYNKLFSSYIQRGL 175

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>SRYD_DROME (P07664) Serendipity locus protein delta|
          Length = 433

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = +3

Query: 66  SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 245
           +D  F    KD++  D EI R+++             DEE E+      E+I + +   D
Sbjct: 126 ADALFVELVKDQEESDTEIKREFV-------------DEEEEEDDDDDDEFICEDVDVGD 172

Query: 246 MEAVYKK 266
            EA+Y K
Sbjct: 173 SEALYGK 179

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>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding|
           factor 1-A) (UBF-1-A) (xUBF-1)
          Length = 677

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +3

Query: 156 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPK 326
           DY + LA+++   Y+T F  ++ KG+S+ D  A YK+ ++  R   S AK   P  K
Sbjct: 531 DYYKKLAEDQQRVYRTQFDTWM-KGLSSQD-RAAYKEQNSNKR--KSTAKIQVPVAK 583

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>CTR3_MOUSE (P70423) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 618

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -1

Query: 206 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 66
           +S  L G ++   PHV++  P    LA+ L +  LLVL  +  +LVT
Sbjct: 144 ISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVT 190

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>SCNNB_RAT (P37090) Amiloride-sensitive sodium channel beta-subunit|
           (Epithelial Na+ channel beta subunit) (Beta ENaC)
           (Nonvoltage-gated sodium channel 1 beta subunit) (SCNEB)
           (Beta NaCH)
          Length = 638

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 207 SEFGTSRVPHLLATSCSQQHALHRCTCGESQHP 109
           S++ T+        SC Q H +H C+CG   +P
Sbjct: 373 SDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYP 405

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>NCKP1_ARATH (Q5S2C4) Protein NAP1 (Nck-associated protein 1) (AtNAP1)|
           (AtNAP125) (p125Nap1) (NAP of plants) (ARP2/3 regulatory
           protein subunit NAPP) (Protein GNARLED)
          Length = 1425

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = -1

Query: 269 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLL 90
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SID+  V L    ++ L 
Sbjct: 302 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDIALVVLKENLVVTLF 359

Query: 89  ETSKSL 72
               SL
Sbjct: 360 RDEVSL 365

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>ODO1_RICCN (Q92J42) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)|
           (Alpha-ketoglutarate dehydrogenase)
          Length = 928

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
 Frame = +3

Query: 63  HSDKRFAGFKKDEKSLDAEIHRKYIYGG-------HVADYMRSLADEEPEKYQTHFSEYI 221
           H D  F G     +SL       Y  GG       +   +  + AD    +Y T F++ I
Sbjct: 350 HGDAAFCGQGVVAESLSMSPLAAYDIGGILHFVINNQLGFTANAADTRASRYSTEFAKII 409

Query: 222 KKGI---SADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRY 341
              I   + DD+EAV K  + A+       K        +++Y
Sbjct: 410 AAPILHVNGDDIEAVLKATNIAVEYRQKFGKDVVVEIICYRKY 452

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 216 YIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVER 392
           Y +K +   D        HAAIR +P   K  K   K  KR+N  K++  ++K  + ++
Sbjct: 30  YARKRLVIQDKNKYNTPAHAAIRENPVYEKKPKREVK-KKRWNRPKMSLAQKKDRVAQK 87

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>VTA1_YEAST (Q06263) Vacuolar protein sorting-associated protein VTA1|
           (VPS20-associated protein 1)
          Length = 330

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 25/84 (29%), Positives = 40/84 (47%)
 Frame = +3

Query: 174 ADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNPKK 353
           AD   E+ QT   +  +  I+ D+ + V K+V     + PS     +PA   HK Y   +
Sbjct: 231 ADSVNEEEQT--VDKNEDAITKDEQQVVKKEVDLTRPSAPS-----EPAAAEHKSYTKDE 283

Query: 354 LTYEERKASLVERLNALNNSAGAA 425
           LT    +AS +E++  L   A +A
Sbjct: 284 LTKIMDRASKIEQIQKLAKYAISA 307

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>ZN622_CHICK (Q90Y35) Zinc finger protein 622 (Zn-finger protein C47)|
          Length = 405

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +3

Query: 72  KRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISAD--D 245
           KRF+ F   E  L ++ H          +  +       +K +    + ++KG++ +  D
Sbjct: 74  KRFSTFNAYENHLKSKKH---------LELEKKAVQAVSKKVKILNEKNLEKGLAVESVD 124

Query: 246 MEAVYKKVHAAIRADPSMAKSTKPAPKTHKRYNP 347
            + +   +  AIRA PS +    P P +H   +P
Sbjct: 125 KDEMNAAIQQAIRAQPSSSPKKVPLPPSHASSSP 158

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>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor|
           (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein
           tyrosine phosphatase-NP) (PTP-NP)
          Length = 1001

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 347 QEAHLRGEEGQPRREAQRPQQL 412
           QE+H RG EGQPR +   P+ +
Sbjct: 340 QESHGRGAEGQPREQTDAPETM 361

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>GIDA_BORGA (Q662I6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 621

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
 Frame = +3

Query: 66  SDKRFAGFKKDEKSLDAEIHRKYIYGGHVADYMRSLADEEPEKYQTHFSEYIKKGISADD 245
           SDKR      D   +D E + KY++     + ++ L  +     +    E +KK +S D 
Sbjct: 441 SDKRLIKIGYDLGLVDEERYSKYLFKKRRVEEIKELLKQRRLSLKDVADEQLKKHVSKDF 500

Query: 246 MEAVYK---KVHAAIRADPSMAKSTKPAPKTHKRYNPKKLTYEERKASLVERLNAL 404
              +      +   I+ DPS++ S     +     + K   Y  R+  L+++LN L
Sbjct: 501 YHILKDPSISLDNLIKIDPSLSDSKVILEQV--ELDVKYEGYINRQKDLIKKLNNL 554

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>UBF1B_XENLA (P25980) Nucleolar transcription factor 1-B (Upstream binding|
           factor 1-B) (UBF-1-B) (xUBF-2)
          Length = 701

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +3

Query: 156 DYMRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADPSMAKSTKPAPKT 329
           DY + LA+++   Y+T F  ++ KG+S  D  A YK+ +   R   S  K   P+ K+
Sbjct: 553 DYYKKLAEDQQRLYRTQFDTWM-KGLSTQD-RAAYKEQNTNKR--KSTTKIQAPSSKS 606

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>CTR3_RAT (O08812) Cationic amino acid transporter 3 (CAT-3) (Solute carrier|
           family 7 member 3) (Cationic amino acid transporter y+)
          Length = 619

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -1

Query: 206 VSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVLLETSKSLVT 66
           +S  L G ++   PHV++  P    LA+ L +  LLVL      LVT
Sbjct: 144 ISQTLKGTILLNMPHVLAEYPDFFALALVLLLTGLLVLGANESGLVT 190

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>Y1664_METJA (Q59058) Hypothetical protein MJ1664|
          Length = 226

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
 Frame = +3

Query: 162 MRSLADEEPEKYQTHFSEYIKKGISADDMEAVYKKVH---AAIRADPSMAKSTKPAPKTH 332
           M  L  +  ++ +  F EY   G S+D+   +YK  +   + IR   +M +     PK  
Sbjct: 1   MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIK 60

Query: 333 KRYNPKKLT--YEERKASLVERLNAL 404
           + + PK++T   +E     +E +N +
Sbjct: 61  ESHKPKEITEKIKENDIYFLELINEI 86

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>TREF1_HUMAN (Q96PN7) Transcriptional-regulating factor 1|
           (Transcriptional-regulating protein 132) (Zinc finger
           transcription factor TReP-132) (Zinc finger protein
           rapa)
          Length = 1200

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +2

Query: 302 QINQASSQ--DSQEVQPQEAHLRGEEGQPRREAQRPQQL 412
           Q  QA  Q    QE+Q Q   +R  + QP  + Q+PQQL
Sbjct: 274 QQQQAGQQRISMQEIQTQPQQIRPSQPQPPPQQQQPQQL 312

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>ITB6_HUMAN (P18564) Integrin beta-6 precursor|
          Length = 788

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
 Frame = -3

Query: 165 SCSQQHALHRCTCGESQHPETS------RPS*NQQISCHCGECPDH 46
           +C   H   RC CGE      S       PS + +  C+CG+C  H
Sbjct: 480 ACHPGHMGPRCECGEDMLSTDSCKEAPDHPSCSGRGDCYCGQCICH 525

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>OAF1_YEAST (P39720) Oleate-activated transcription factor 1|
          Length = 1047

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
 Frame = +3

Query: 141 GGHVADYMRSLADEEP---------EKYQTHFSEYIKKGISADDMEAVYKKVHAAIRADP 293
           GG  +D +R+L +E           E+Y+ HF EY+   +   ++E   + +   I  DP
Sbjct: 319 GGEYSDLLRNLINECEAILPSYEIIERYKNHFYEYVYPSLPFIELEIFEESLSQTIFPDP 378

Query: 294 S 296
           +
Sbjct: 379 N 379

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>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)|
           (P125Nap1) (NAP of plants)
          Length = 1359

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 20/59 (33%), Positives = 30/59 (50%)
 Frame = -1

Query: 269 NLLVNCFHVIS*DSLLDVLTEVSLVLLGFLIC*RPHVVSNMPSIDVLAVNLSIQRLLVL 93
           ++L N  H +    L +V +    VLLG+L+C  P  +  + SIDV  V L    +L L
Sbjct: 291 DILTNSAHPMRAQDLANVTSYREWVLLGYLVC--PDELLRVTSIDVAMVVLKENLVLSL 347


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,546,342
Number of Sequences: 219361
Number of extensions: 1218245
Number of successful extensions: 4568
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 4343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4552
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result