ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29n08 |
|---|---|
| Clone Library Name | barley_pub |
>TMEDA_RABIT (Q28735) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) (Integral membrane protein p23) Length = 219 Score = 73.6 bits (179), Expect = 3e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_RAT (Q63584) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 73.2 bits (178), Expect = 4e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_MOUSE (Q9D1D4) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 73.2 bits (178), Expect = 4e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_BOVIN (Q5E971) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 73.2 bits (178), Expect = 4e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_MESAU (O35587) Transmembrane protein Tmp21 precursor (21 kDa| transmembrane trafficking protein) (Integral membrane protein p23) Length = 219 Score = 72.8 bits (177), Expect = 5e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMLCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_PONPY (Q5RE32) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) Length = 219 Score = 72.4 bits (176), Expect = 7e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMEKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_HUMAN (P49755) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (21 kDa transmembrane trafficking protein) (p24delta) (S31III125) (S31I125) (Tmp-21-I) Length = 219 Score = 72.4 bits (176), Expect = 7e-13 Identities = 42/148 (28%), Positives = 75/148 (50%) Frame = +2 Query: 29 RVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGV 208 R L++T G+ ++ E+ G FAFT + + CF + D K GV Sbjct: 71 RSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV 130 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 AK++ +AK K+ +E+EL++LED ++I ++ N TN+R+ + S Sbjct: 131 EAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFS 190 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 S+ + +A Q+++L+ FF+ KKL+ Sbjct: 191 IFSMFCLIGLATWQVFYLRRFFKAKKLI 218
>TMEDA_FUGRU (Q90515) Transmembrane emp24 domain-containing protein 10 precursor| (Transmembrane protein Tmp21) (S31III125) Length = 213 Score = 69.7 bits (169), Expect = 5e-12 Identities = 39/144 (27%), Positives = 73/144 (50%) Frame = +2 Query: 41 RVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGVTAKD 220 ++T ++++ E+ G FAFT + + CF + D K GV AK+ Sbjct: 69 KITDSSSHTLYSKEDATKGKFAFTTEDYDMFEVCFESKCTGRVPDQLVNLDMKHGVEAKN 128 Query: 221 WSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSL 400 + +AK K+ +E+EL++LED ++I ++ N TN+R+ + S S+ Sbjct: 129 YEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSM 188 Query: 401 GICLSVAGLQLWHLKTFFERKKLL 472 + +A Q+++L+ FF+ KKL+ Sbjct: 189 FCLIGLATWQVFYLRRFFKAKKLI 212
>TMED9_MOUSE (Q99KF1) Transmembrane emp24 domain-containing protein 9 precursor| (Glycoprotein 25L2) Length = 214 Score = 58.2 bits (139), Expect = 1e-08 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Frame = +2 Query: 95 GHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSGVTAKDWSNVAKKGKVDMME 262 G F FT+ G++ C + K + + D + G A D++ +A K K+ ++ Sbjct: 85 GRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQ 144 Query: 263 LELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHL 442 L +++L + ++ I + + TN R+ W S L I L++ Q+ HL Sbjct: 145 LRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSVLQTLILLAIGVCQMRHL 204 Query: 443 KTFFERKKLL 472 K+FFE KKL+ Sbjct: 205 KSFFEAKKLV 214
>TMED9_BOVIN (Q3T133) Transmembrane emp24 domain-containing protein 9 precursor| Length = 235 Score = 57.0 bits (136), Expect = 3e-08 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Frame = +2 Query: 95 GHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSGVTAKDWSNVAKKGKVDMME 262 G F FT+ G++ C + K + + D + G A D++ +A K K+ ++ Sbjct: 106 GRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQ 165 Query: 263 LELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHL 442 L +++L + ++ I + + TN R+ W S L I +++ Q+ HL Sbjct: 166 LRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHL 225 Query: 443 KTFFERKKLL 472 K+FFE KKL+ Sbjct: 226 KSFFEAKKLV 235
>TMED9_HUMAN (Q9BVK6) Transmembrane emp24 domain-containing protein 9 precursor| (Glycoprotein 25L2) Length = 214 Score = 57.0 bits (136), Expect = 3e-08 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%) Frame = +2 Query: 95 GHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSGVTAKDWSNVAKKGKVDMME 262 G F FT+ G++ C + K + + D + G A D++ +A K K+ ++ Sbjct: 85 GRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDKLSELQ 144 Query: 263 LELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQLWHL 442 L +++L + ++ I + + TN R+ W S L I +++ Q+ HL Sbjct: 145 LRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIGVWQMRHL 204 Query: 443 KTFFERKKLL 472 K+FFE KKL+ Sbjct: 205 KSFFEAKKLV 214
>ERV25_YEAST (P54837) Protein ERV25 precursor| Length = 211 Score = 54.3 bits (129), Expect = 2e-07 Identities = 38/159 (23%), Positives = 71/159 (44%), Gaps = 3/159 (1%) Frame = +2 Query: 5 DAQLPDSHRVSLRVTSPYGNSMHYSENVQSG-HFAFTAVEAGDYLACF--WAPDHKPPVT 175 D + D +++L V GN + AFTA + + CF A ++ Sbjct: 53 DGSVGDGQKLNLFVRDSVGNEYRRKRDFAGDVRVAFTAPSSTAFDVCFENQAQYRGRSLS 112 Query: 176 VTFEFDWKSGVTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNIN 355 E D +SG A+DW+ ++ K+ +E+EL+++E+ I ++ N Sbjct: 113 RAIELDIESGAEARDWNKISANEKLKPIEVELRRVEEITDEIVDELTYLKNREERLRDTN 172 Query: 356 RQTNSRMGWLSFLSLGICLSVAGLQLWHLKTFFERKKLL 472 TN R+ S L + + S+ Q+ +LK +F+ K ++ Sbjct: 173 ESTNRRVRNFSILVIIVLSSLGVWQVNYLKNYFKTKHII 211
>TMED4_MOUSE (Q8R1V4) Transmembrane emp24 domain-containing protein 4 precursor| (p26) Length = 227 Score = 52.4 bits (124), Expect = 7e-07 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +2 Query: 38 LRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSG 205 + V P G + + G F FT+ GD+ C + + + + D + G Sbjct: 79 VEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVG 138 Query: 206 VTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWL 385 A ++ +A K K+ ++L ++L D ++ I + + TN R+ W Sbjct: 139 EHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWW 198 Query: 386 SFLSLGICLSVAGLQLWHLKTFFERKKLL 472 S I + Q+ HLK+FFE KKL+ Sbjct: 199 SIAQTVILILTGIWQMRHLKSFFEAKKLV 227
>TMED4_HUMAN (Q7Z7H5) Transmembrane emp24 domain-containing protein 4 precursor| Length = 227 Score = 52.4 bits (124), Expect = 7e-07 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Frame = +2 Query: 38 LRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPV----TVTFEFDWKSG 205 + V P G + + G F FT+ GD+ C + + + + D + G Sbjct: 79 VEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICLHSNSTRMALFAGGKLRVHLDIQVG 138 Query: 206 VTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWL 385 A ++ +A K K+ ++L ++L D ++ I + + TN R+ W Sbjct: 139 EHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQRVLWW 198 Query: 386 SFLSLGICLSVAGLQLWHLKTFFERKKLL 472 S I + Q+ HLK+FFE KKL+ Sbjct: 199 SIAQTVILILTGIWQMRHLKSFFEAKKLV 227
>TMED2_RAT (Q63524) Transmembrane emp24 domain trafficking protein 2 precursor| (Membrane protein p24A) (RNP21.4) Length = 201 Score = 45.4 bits (106), Expect = 9e-05 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = +2 Query: 32 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 208 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 116 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 117 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 173 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 F + +++ Q+++LK FFE ++++ Sbjct: 174 FFEALVLVAMTLGQIYYLKRFFEVRRVV 201
>TMED2_MOUSE (Q9R0Q3) Transmembrane emp24 domain trafficking protein 2 precursor| (Membrane protein p24A) (Sid 394) Length = 201 Score = 45.4 bits (106), Expect = 9e-05 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = +2 Query: 32 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 208 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 116 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 117 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 173 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 F + +++ Q+++LK FFE ++++ Sbjct: 174 FFEALVLVAMTLGQIYYLKRFFEVRRVV 201
>TMED2_HUMAN (Q15363) Transmembrane emp24 domain trafficking protein 2 precursor| (Membrane protein p24A) Length = 201 Score = 45.4 bits (106), Expect = 9e-05 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = +2 Query: 32 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 208 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 57 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 116 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 117 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 173 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 F + +++ Q+++LK FFE ++++ Sbjct: 174 FFEALVLVAMTLGQIYYLKRFFEVRRVV 201
>TMED2_CRIGR (P49020) Transmembrane emp24 domain trafficking protein 2 precursor| (COPI-coated vesicle membrane protein p24) (Fragment) Length = 196 Score = 45.4 bits (106), Expect = 9e-05 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 1/148 (0%) Frame = +2 Query: 32 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFW-APDHKPPVTVTFEFDWKSGV 208 + + +T P ++ + SG + F A G Y CF P V F D Sbjct: 52 IDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMFTIDIGEAP 111 Query: 209 TAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLS 388 +D A + K++ M + +L + A+ + IN TNSR+ S Sbjct: 112 KGQDMETEAHQNKLEEM---INELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWS 168 Query: 389 FLSLGICLSVAGLQLWHLKTFFERKKLL 472 F + +++ Q+++LK FFE ++++ Sbjct: 169 FFEALVLVAMTLGQIYYLKRFFEVRRVV 196
>ERP6_YEAST (P53198) Protein ERP6 precursor| Length = 216 Score = 42.0 bits (97), Expect = 0.001 Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 6/139 (4%) Frame = +2 Query: 74 YSENVQSGHFAFTAVEAGDYLACF------WAPDHKPPVTVTFEFDWKSGVTAKDWSNVA 235 + + SG F+F A+E+G+Y C W K + + FE +++ + ++ Sbjct: 84 HQQGSPSGDFSFLALESGEYKICLQSRVNNWVGKTKTKLEIEFEVGFEAML------DMQ 137 Query: 236 KKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLS 415 +K ++ + ++ L I I ++I+ NSR W + + + + Sbjct: 138 RKETLESLHGKVSILNSKIVDIRREQQLMREREESFRDISESVNSRAMWWTVTQVTLLII 197 Query: 416 VAGLQLWHLKTFFERKKLL 472 + Q+ L++FF ++K+L Sbjct: 198 ICVWQMKSLRSFFVKQKVL 216
>G25L_MOUSE (Q9D2R4) Glycoprotein 25L precursor (GP25L)| Length = 215 Score = 41.6 bits (96), Expect = 0.001 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 7/133 (5%) Frame = +2 Query: 95 GHFAFTAVEAGDYLACFWAPDHKPPVTVTF-------EFDWKSGVTAKDWSNVAKKGKVD 253 G F FT+ +G+++ C + V+F D + G D + V K KV+ Sbjct: 86 GTFYFTSHSSGEHIICL---ESNSTQFVSFGGSKLRIHLDIRVGEHDLDAAIVQAKDKVN 142 Query: 254 MMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQL 433 + +L+ L + ++ I + + TN + W +F + I +SV Q+ Sbjct: 143 EVTFKLQHLIEQVEQILKEQDYQRDREENFRITSEDTNRNVLWWAFAQILIFISVGIFQM 202 Query: 434 WHLKTFFERKKLL 472 HLK FF KKL+ Sbjct: 203 KHLKDFFIAKKLV 215
>SEL9_CAEEL (O17528) Suppressor/enhancer of lin-12 protein 9 precursor| Length = 203 Score = 40.8 bits (94), Expect = 0.002 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 6/153 (3%) Frame = +2 Query: 32 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAP-DHKPPVTVTFEFD----W 196 + +++T P ++ E SG F F A G Y CF P V F + Sbjct: 55 IDVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPH 114 Query: 197 KSGVTAKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSR- 373 + A + A K++ M +++L + ++ +NIN TNSR Sbjct: 115 QQAPGAAANQDAADNAKLEEM---VRELSSALMSVKHEQEYMEVRERVHRNINENTNSRV 171 Query: 374 MGWLSFLSLGICLSVAGLQLWHLKTFFERKKLL 472 + W +F + + G Q+++LK FFE + ++ Sbjct: 172 VMWAAFEAFVLVGMTVG-QIFYLKRFFEVRTMV 203
>ERP5_YEAST (P38819) Protein ERP5 precursor| Length = 212 Score = 40.4 bits (93), Expect = 0.003 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 3/134 (2%) Frame = +2 Query: 80 ENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSG-VTAKDWSNVAKKGKVDM 256 +N +G FTA++ G++ CF K T+ + + G V A D K K DM Sbjct: 84 KNSHTGDVTFTALDTGEHRFCFTPFYSKKSATLRVFIELEIGNVEALD-----SKKKEDM 138 Query: 257 MELE--LKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQ 430 L+ + +L + +I +N + NS++ S L I L Q Sbjct: 139 NSLKGRVGQLTQRLSSIRKEQDAIREKEAEFRNQSESANSKIMTWSVFQLLILLGTCAFQ 198 Query: 431 LWHLKTFFERKKLL 472 L +LK FF ++K++ Sbjct: 199 LRYLKNFFVKQKVV 212
>G25L_CANFA (P27869) Glycoprotein 25L precursor (GP25L)| Length = 215 Score = 37.7 bits (86), Expect = 0.019 Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 7/133 (5%) Frame = +2 Query: 95 GHFAFTAVEAGDYLACFWAPDHKPPVTVTF-------EFDWKSGVTAKDWSNVAKKGKVD 253 G F FT+ G+++ C + + V+F + + G D + K KV+ Sbjct: 86 GRFYFTSHSPGEHIICLESNSTR---LVSFGGSKLRIHLEIRVGQHDLDAAIAQAKDKVN 142 Query: 254 MMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQL 433 + +L+ L + I+ I + I+ TNS + W +F I +++ Q+ Sbjct: 143 EVSFKLEHLIEQIEQIVKEQNYQRDREENFRMISEDTNSNVLWWAFAQTLIFIAIGIFQM 202 Query: 434 WHLKTFFERKKLL 472 LK FF KKL+ Sbjct: 203 KSLKNFFIAKKLV 215
>YE98_SCHPO (O13770) Hypothetical protein C17A5.08 precursor| Length = 210 Score = 37.0 bits (84), Expect = 0.033 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 4/150 (2%) Frame = +2 Query: 23 SHRVSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVT---VTFEFD 193 S V + +P ++ + + FT E G+Y CF +H T VT E Sbjct: 57 SFDVDYMIKAPSQKTVALGKKRRQADVFFTLEEKGEYEFCF--DNHMSTFTDKIVTMEIT 114 Query: 194 WKSGVTAKDWS-NVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNS 370 ++ ++ + + AK K D M+ + ++ + I + + T + Sbjct: 115 MENELSLPALTRDEAKDYKKDSMQSTVLEISTALSEIDRVQNYFKTREHRNYSTVKSTQA 174 Query: 371 RMGWLSFLSLGICLSVAGLQLWHLKTFFER 460 R+ W S + ++++ LQ++ +KTFF+R Sbjct: 175 RIFWFSLAESIMVVALSALQVFIVKTFFKR 204
>TMED7_HUMAN (Q9Y3B3) Transmembrane emp24 domain-containing protein 7 precursor| Length = 224 Score = 35.0 bits (79), Expect = 0.12 Identities = 31/145 (21%), Positives = 59/145 (40%) Frame = +2 Query: 32 VSLRVTSPYGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGVT 211 V R+ P G ++ Q F FTA + G Y CF + + T FD++ G Sbjct: 73 VDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCF-SNEFSTFTHKTVYFDFQVGED 131 Query: 212 AKDWSNVAKKGKVDMMELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSF 391 + + + + ME + + ++++ ++ N+R+ + S Sbjct: 132 PPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSV 191 Query: 392 LSLGICLSVAGLQLWHLKTFFERKK 466 I L V+ Q++ LK+FF K+ Sbjct: 192 GEALILLVVSIGQVFLLKSFFSDKR 216
>EMP24_YEAST (P32803) Endosomal P24B protein precursor (24 kDa endomembrane| protein) (Basic 24 kDa late endocytic intermediate component) Length = 203 Score = 33.9 bits (76), Expect = 0.28 Identities = 16/72 (22%), Positives = 33/72 (45%) Frame = +2 Query: 257 MELELKKLEDTIQAIHXXXXXXXXXXXXXQNINRQTNSRMGWLSFLSLGICLSVAGLQLW 436 ++ ++KL + + +N TN R+ W S LG+ ++ + Q++ Sbjct: 132 LDSAVRKLSKLTREVKDEQSYIVIRERTHRNTAESTNDRVKWWSIFQLGVVIANSLFQIY 191 Query: 437 HLKTFFERKKLL 472 +L+ FFE L+ Sbjct: 192 YLRRFFEVTSLV 203
>DHE3_PYRKO (O59650) Glutamate dehydrogenase (EC 1.4.1.3) (GDH)| Length = 420 Score = 32.0 bits (71), Expect = 1.0 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = +2 Query: 56 YGNSMHYSENVQSGHFAFTAVEAGDYLACFWAPDHKPPVTVTFEFDWKSGVTAKDWSNVA 235 YGN+ +Y + S F V D + PD PP ++ + G + KD Sbjct: 220 YGNAGYYLHKIMSEEFGMKVVAVSDSKGGIYNPDGLPPADEVLKWKKEHG-SVKDMPGTQ 278 Query: 236 KKGKVDMMELEL 271 +++ELE+ Sbjct: 279 NITNEELLELEV 290
>PBPC_ECOLI (P76577) Penicillin-binding protein 1C (PBP-1c) (PBP1c) [Includes:| Penicillin-insensitive transglycosylase (EC 2.4.2.-) (Peptidoglycan TGase); Transpeptidase-like module] Length = 770 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -1 Query: 223 PVLGRDAALPVELEGDGDGWLVVRRPEAGQVVPGLNSREG 104 P G DA LP++L G DG ++ R P A + L S G Sbjct: 682 PPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGG 721
>TAH18_EMENI (Q5BB41) Probable NADPH reductase tah18 (EC 1.-.-.-)| Length = 626 Score = 30.4 bits (67), Expect = 3.0 Identities = 18/39 (46%), Positives = 24/39 (61%) Frame = +1 Query: 334 GGNAEHQQADKLEDGVAEFPLAWHLLVRGRAAAVASEDL 450 GG A+HQ + LED V + P W L +R + A ASED+ Sbjct: 144 GGEADHQHSSGLEDDV-QLPPKWVLRLRDQEA--ASEDV 179
>ACPD_RALSO (Q8XQG9) Putative acyl carrier protein phosphodiesterase (EC| 3.1.4.14) (ACP phosphodiesterase) Length = 208 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -1 Query: 256 HIDLALLGDVGPVLGRDAALPVELEGDGDGWLVVRRPEAGQVVPGLN 116 H+D ++LGD AA+ EL D G V+ R A + +P L+ Sbjct: 5 HLDSSILGDASASRILTAAIVDELRRDNPGATVIHRDLAVEAIPHLD 51
>EFC2_HUMAN (P60608) HERV-F(c)2_7q36.2 provirus ancestral Env polyprotein| (Envelope polyprotein) (Fc2deltaenv) [Includes: Surface protein (SU); Truncated transmembrane protein (TM)] Length = 527 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +3 Query: 288 PSKLSMKKCFIYAKGRRKCRTSTGRQTRGWGG*VSSRLASACPWQGCS 431 P++ + CF+Y + KC TS ++ G CPW C+ Sbjct: 114 PARKNPALCFLYDQSNSKCNTSWVKENVG------------CPWHWCN 149 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,556,324 Number of Sequences: 219361 Number of extensions: 1168075 Number of successful extensions: 3684 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3561 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3659 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
