ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29m20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Plus Query: 31 gccacaatgtcacatgagatcggatctcccctttcagaagtccttaggatagccgagctt 90 ||||| ||||||||||||||| | || || ||||||| || ||||| || || || || Sbjct: 26425984 gccaccatgtcacatgagatcaggtcccctctttcaggggttcttagcatggctgaaatt 26426043 Query: 91 cttgcaactaccaaactggatcaagaacaacatcagttgctagagcttatgttatcctct 150 ||||||||||||||| ||||| |||| ||| ||||||||||||| ||||| | || ||| Sbjct: 26426044 cttgcaactaccaaattggataaagagcaatatcagttgctagaagttatgctgtcatct 26426103 Query: 151 ggaaatgttgtgttacaatcgatcgatggcatccttggtctctccaaagtggaatcaggt 210 ||| | |||| ||||||| ||| | | |||||||| ||| |||||||| || |||||| Sbjct: 26426104 ggagaccttgtattacaattaatcaacgacatccttgatctttccaaagtagagtcaggt 26426163 Query: 211 atttcaaagaatatggtatt 230 |||| ||| |||||||||| Sbjct: 26426164 attttaaatcatatggtatt 26426183 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 tatgtagtactccttccgtcc 511 ||||||||||||||||||||| Sbjct: 9853686 tatgtagtactccttccgtcc 9853706 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ttcctttaattagttacatt 356 |||||||||||||||||||| Sbjct: 4268584 ttcctttaattagttacatt 4268603
>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0709F06 Length = 170964 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Plus Query: 31 gccacaatgtcacatgagatcggatctcccctttcagaagtccttaggatagccgagctt 90 ||||| ||||||||||||||| | || || ||||||| || ||||| || || || || Sbjct: 38023 gccaccatgtcacatgagatcaggtcccctctttcaggggttcttagcatggctgaaatt 38082 Query: 91 cttgcaactaccaaactggatcaagaacaacatcagttgctagagcttatgttatcctct 150 ||||||||||||||| ||||| |||| ||| ||||||||||||| ||||| | || ||| Sbjct: 38083 cttgcaactaccaaattggataaagagcaatatcagttgctagaagttatgctgtcatct 38142 Query: 151 ggaaatgttgtgttacaatcgatcgatggcatccttggtctctccaaagtggaatcaggt 210 ||| | |||| ||||||| ||| | | |||||||| ||| |||||||| || |||||| Sbjct: 38143 ggagaccttgtattacaattaatcaacgacatccttgatctttccaaagtagagtcaggt 38202 Query: 211 atttcaaagaatatggtatt 230 |||| ||| |||||||||| Sbjct: 38203 attttaaatcatatggtatt 38222
>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085J13 Length = 130185 Score = 95.6 bits (48), Expect = 2e-16 Identities = 162/200 (81%) Strand = Plus / Plus Query: 31 gccacaatgtcacatgagatcggatctcccctttcagaagtccttaggatagccgagctt 90 ||||| ||||||||||||||| | || || ||||||| || ||||| || || || || Sbjct: 123711 gccaccatgtcacatgagatcaggtcccctctttcaggggttcttagcatggctgaaatt 123770 Query: 91 cttgcaactaccaaactggatcaagaacaacatcagttgctagagcttatgttatcctct 150 ||||||||||||||| ||||| |||| ||| ||||||||||||| ||||| | || ||| Sbjct: 123771 cttgcaactaccaaattggataaagagcaatatcagttgctagaagttatgctgtcatct 123830 Query: 151 ggaaatgttgtgttacaatcgatcgatggcatccttggtctctccaaagtggaatcaggt 210 ||| | |||| ||||||| ||| | | |||||||| ||| |||||||| || |||||| Sbjct: 123831 ggagaccttgtattacaattaatcaacgacatccttgatctttccaaagtagagtcaggt 123890 Query: 211 atttcaaagaatatggtatt 230 |||| ||| |||||||||| Sbjct: 123891 attttaaatcatatggtatt 123910
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 65.9 bits (33), Expect = 1e-07 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| ||||||||||||| | ||||||||| | ||| || |||||| ||| Sbjct: 52138 tactccctccgtccggaattacttgtcacacaaatggataaaaatggatatatctagaac 52197 Query: 558 aaaaaatacatctagatacat 578 ||||||||||||||||||| Sbjct: 52198 -taaaatacatctagatacat 52217
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 61.9 bits (31), Expect = 2e-06 Identities = 71/83 (85%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 495 tagtactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaa 554 ||||||||| || |||| || |||||||||| ||||||||| | ||||||||||||| Sbjct: 36486 tagtactccctctgtccgaaaatacttgtcatcaaaatggataaaaatgaatgtatctag 36545 Query: 555 aacaaaaaatacatctagataca 577 ||| |||||||||||||||||| Sbjct: 36546 aac-taaaatacatctagataca 36567 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 492 atgtagtactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatc 551 |||||||||||| ||||||| ||| |||||||| | ||||||||| | ||| ||||||| Sbjct: 93585 atgtagtactccctccgtccggaaatacttgtcgcagaaatggatataaatggatgtatc 93526 Query: 552 taaaacaaaaa 562 || ||| |||| Sbjct: 93525 tagaactaaaa 93515
>gb|BT009083.1| Triticum aestivum clone wkm1c.pk0004.c7:fis, full insert mRNA sequence Length = 1186 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 513 gaattacttgtcatataaatggatagacatgaatgtatctaaaacaaaaaatacatctag 572 |||||||||||| || |||||| || | ||||||||||||| ||| |||||||| | ||| Sbjct: 882 gaattacttgtcgtagaaatgggtaaaaatgaatgtatctagaactaaaaatacgtttag 941 Query: 573 atacat 578 |||||| Sbjct: 942 atacat 947
>gb|AF022725.1|AF022725 Hordeum vulgare limit dextrinase (HvLD99) gene, complete cds Length = 12034 Score = 58.0 bits (29), Expect = 3e-05 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| ||||||||||||| ||||||| ||| | ||| ||||||||| || Sbjct: 11627 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaa- 11569 Query: 558 aaaaaatacatctagatacat 578 | ||||||||||||||||| Sbjct: 11568 ttataatacatctagatacat 11548
>gb|AF122049.1|AF122049 Hordeum vulgare tissue-type aleurone limit dextrinase mRNA, complete cds Length = 3429 Score = 58.0 bits (29), Expect = 3e-05 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| ||||||||||||| ||||||| ||| | ||| ||||||||| || Sbjct: 3299 tactccctccgtccggaattacttgtcacataaatgtataaaaatggatgtatctagaa- 3241 Query: 558 aaaaaatacatctagatacat 578 | ||||||||||||||||| Sbjct: 3240 ttataatacatctagatacat 3220
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and LRK19 (Lrk19) genes, complete cds Length = 35872 Score = 54.0 bits (27), Expect = 5e-04 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand = Plus / Minus Query: 493 tgtagtactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatct 552 |||| |||||| || |||| |||||||||||| ||||||||||| | ||| |||||||| Sbjct: 33745 tgtactactccctctgtccggaattacttgtcgcataaatggataaaaatggatgtatct 33686 Query: 553 aaaacaaaaaatacatctagata 575 | || |||||||||||||||| Sbjct: 33685 agaa-ttaaaatacatctagata 33664
>gb|L41869.1|BLYBGQ6 Hordeum vulgare L. beta-glucosidase (BGQ60) gene, complete cds Length = 4152 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 513 gaattacttgtcatataaatggatagacatgaatgtatctaaaacaaaaaatacatctag 572 |||||||||||| | ||||| ||||| ||| ||||||||| ||| |||| ||||||||| Sbjct: 3115 gaattacttgtcgcaaaaatgaatagaaatggatgtatctataactaaaa-tacatctag 3057 Query: 573 atacat 578 |||||| Sbjct: 3056 atacat 3051
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| ||| |||||||| | ||||||| ||| ||| ||||||||| ||| Sbjct: 69911 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 69852 Query: 558 aaaaaatacatctagatacat 578 |||| ||| ||||||||||| Sbjct: 69851 taaaa-tacgtctagatacat 69832
>gb|AY235469.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2C9) gene, exons 8 through 15, partial sequence Length = 3511 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 673 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 732 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 733 taaaa-tacatctagatacat 752 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 796 tatgtagtactccctccgtccggaaatacttgtc 763
>gb|AY235468.1| Triticum aestivum FCA-like protein (Fca-2A3) gene, exons 8 through 15, partial cds Length = 3601 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 715 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 774 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 775 taaaa-tacatctagatacat 794 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 838 tatgtagtactccctccgtccggaaatacttgtc 805
>gb|AY235467.1| Triticum aestivum FCA-like protein (Fca-1C5) gene, exons 8 through 15, partial cds Length = 3508 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 656 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 715 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 716 taaaa-tacatctagatacat 735 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 779 tatgtagtactccctccgtccggaaatacttgtc 746
>gb|AY235466.1| Triticum aestivum FCA-like protein (Fca-1F10) gene, exons 8 through 15, partial cds Length = 3502 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 660 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 719 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 720 taaaa-tacatctagatacat 739 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 783 tatgtagtactccctccgtccggaaatacttgtc 750
>gb|AY235464.1| Triticum aestivum FCA-like protein (Fca-5A3) gene, exons 8 through 15, partial cds Length = 3593 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 718 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 777 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 778 taaaa-tacatctagatacat 797
>gb|AY235462.1| Triticum aestivum FCA-like protein (Fca-4C5) gene, exons 8 through 15, partial cds Length = 3585 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 701 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 760 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 761 taaaa-tacatctagatacat 780 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 824 tatgtagtactccctccgtccggaaatacttgtc 791
>gb|AY235461.1| Triticum aestivum FCA-like protein (Fca-1B8) gene, exons 8 through 15, partial cds Length = 3631 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 727 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 786 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 787 taaaa-tacatctagatacat 806 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 850 tatgtagtactccctccgtccggaaatacttgtc 817
>gb|AY235448.1| Triticum aestivum FCA-like protein (Fca-2G10) gene, exons 8 through 15, partial cds Length = 3610 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 724 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 783 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 784 taaaa-tacatctagatacat 803 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 847 tatgtagtactccctccgtccggaaatacttgtc 814
>gb|AY235447.1| Triticum aestivum FCA-like protein (Fca-5H8) gene, exons 8 through 15, partial cds Length = 3524 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||| || ||||| ||| | ||| ||||||||| ||| Sbjct: 703 tactccctccgtcccaaaatacttgtcgtagaaatgcataaaaatggatgtatctagaac 762 Query: 558 aaaaaatacatctagatacat 578 |||| ||||||||||||||| Sbjct: 763 taaaa-tacatctagatacat 782 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 826 tatgtagtactccctccgtccggaaatacttgtc 793
>gb|AF459085.1| Hordeum vulgare SNF2P (Snf2P) gene, complete cds Length = 7963 Score = 50.1 bits (25), Expect = 0.008 Identities = 68/81 (83%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| ||| |||||||| | ||||||| ||| ||| ||||||||| ||| Sbjct: 1863 tactccctccgtccggaagtacttgtcgtcaaaatggaaagaaatggatgtatctagaac 1804 Query: 558 aaaaaatacatctagatacat 578 |||| ||| ||||||||||| Sbjct: 1803 taaaa-tacgtctagatacat 1784
>gb|AY162186.1| Triticum monococcum extracellular invertase (exin1) mRNA, complete cds Length = 2279 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 494 gtagtactccttccgtcctgaattacttgtc 524 |||||||||||||||| | |||||||||||| Sbjct: 2057 gtagtactccttccgttcggaattacttgtc 2087
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 517 tacttgtcatataaatggatagacatgaatgtatctaaaacaaaaaatacatctagatac 576 |||||||||| ||||||| | | ||| ||||||||| ||| |||| ||||||||||||| Sbjct: 113437 tacttgtcatcaaaatggacaaaaatggatgtatctagaactaaaa-tacatctagatac 113495 Query: 577 at 578 || Sbjct: 113496 at 113497
>gb|AY235463.1| Triticum aestivum nonfunctional FCA-like protein (Fca-2E11) gene, exons 8 through 15, partial sequence Length = 3592 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcctgaattacttgtc 524 ||||||||||||| ||||||| ||| |||||||| Sbjct: 836 tatgtagtactccctccgtccggaaatacttgtc 803 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 517 tacttgtcatataaatggatagacatgaatgtatctaaaacaaaaaatacatctagatac 576 |||||||| || ||||| ||| | ||| ||||||||| ||| |||| ||||||||||||| Sbjct: 732 tacttgtcgtagaaatgtataaaaatggatgtatctagaactaaaa-tacatctagatac 790 Query: 577 at 578 || Sbjct: 791 at 792
>gb|AF532104.1|AF532104S1 Aegilops tauschii strain TA1649 cosmid 69-7-1 Lr21 gene, complete cds; and unknown gene Length = 27960 Score = 44.1 bits (22), Expect = 0.50 Identities = 53/62 (85%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 517 tacttgtcatataaatggatagacatgaatgtatctaaaacaaaaaatacatctagatac 576 |||||||||| ||||||||| | | ||||||||||| || |||| ||||||||||||| Sbjct: 14840 tacttgtcatcaaaatggataaaaaagaatgtatctagaattaaaa-tacatctagatac 14898 Query: 577 at 578 || Sbjct: 14899 at 14900
>gb|AC064802.4| Homo sapiens chromosome 8, clone RP11-267L5, complete sequence Length = 181079 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 294 cctgggcatttttgtactttgg 315 |||||||||||||||||||||| Sbjct: 107078 cctgggcatttttgtactttgg 107099
>emb|BX294100.11| Zebrafish DNA sequence from clone DKEYP-2G11 in linkage group 12, complete sequence Length = 173405 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 408 attggttgataattagtactga 429 |||||||||||||||||||||| Sbjct: 144596 attggttgataattagtactga 144575
>gb|AC113949.2| Homo sapiens chromosome 1 clone RP11-563M18, complete sequence Length = 172143 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 catatagtatgtagtactcctt 505 |||||||||||||||||||||| Sbjct: 12177 catatagtatgtagtactcctt 12198
>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 Length = 2039961 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 taacttggcaattggttgataa 419 |||||||||||||||||||||| Sbjct: 1555056 taacttggcaattggttgataa 1555035
>gb|AC093003.11| Homo sapiens 3 BAC RP11-114I8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153680 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 550 tctaaaacaaaaaatacatcta 571 |||||||||||||||||||||| Sbjct: 10906 tctaaaacaaaaaatacatcta 10927
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 311 tttggaaggcgcttaatggtgc 332 |||||||||||||||||||||| Sbjct: 1187775 tttggaaggcgcttaatggtgc 1187754
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 226661 attcatgcatatatacatata 226641
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence Length = 285506 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||||||| |||||||| | ||||| ||| | ||| ||||||||| ||| Sbjct: 196596 tactccctccgtcctgaaatacttgtcggagaaatgcataaaaatggatgtatctagaac 196655 Query: 558 aaaaa 562 |||| Sbjct: 196656 taaaa 196660 Score = 42.1 bits (21), Expect = 2.0 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| || |||||||||| ||||||||| | | | || |||||||||| Sbjct: 101971 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaaaggatatatctaaaac 101912 Query: 558 aaaaaatacatctagatacat 578 || | ||||||||||||||| Sbjct: 101911 taata-tacatctagatacat 101892
>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence Length = 194871 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 102781 attcatgcatatatacatata 102801
>gb|AC152394.11| Mus musculus chromosome 15, clone RP23-100K19, complete sequence Length = 203260 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 atcaggtatttcaaagaatat 224 ||||||||||||||||||||| Sbjct: 150484 atcaggtatttcaaagaatat 150464
>gb|AC102000.14| Mus musculus chromosome 15, clone RP24-467P24, complete sequence Length = 171400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 204 atcaggtatttcaaagaatat 224 ||||||||||||||||||||| Sbjct: 5408 atcaggtatttcaaagaatat 5388
>gb|AY456023.1| Cochliobolus heterostrophus putative histidine kinase NIK1p (NIK1) gene, partial cds Length = 4019 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 3486 attcatgcatatatacatata 3466
>gb|AC135806.4| Mus musculus BAC clone RP24-289M10 from chromosome 18, complete sequence Length = 179327 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 21028 attcatgcatatatacatata 21008
>gb|AC123036.3| Mus musculus BAC clone RP24-512B13 from chromosome 10, complete sequence Length = 195692 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tcagaagtccttaggatagcc 84 ||||||||||||||||||||| Sbjct: 6203 tcagaagtccttaggatagcc 6183
>ref|XM_737091.1| Plasmodium chabaudi chabaudi exported serine/threonine protein kinase (PC000188.03.0) partial mRNA Length = 2439 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 542 tgaatgtatctaaaacaaaaaatac 566 ||||||||| ||||||||||||||| Sbjct: 2408 tgaatgtatttaaaacaaaaaatac 2432
>gb|BT009606.1| Triticum aestivum clone wre1n.pk0091.d5:fis, full insert mRNA sequence Length = 1469 Score = 42.1 bits (21), Expect = 2.0 Identities = 55/65 (84%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 514 aattacttgtcatataaatggatagacatgaatgtatctaaaacaaaaaatacatctaga 573 ||||||| |||| | ||||||||| | ||| ||||||||| || |||| |||||||||| Sbjct: 1304 aattactcgtcacaaaaatggataaaaatggatgtatctacaattaaaa-tacatctaga 1246 Query: 574 tacat 578 ||||| Sbjct: 1245 tacat 1241
>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence Length = 234778 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 65324 attcatgcatatatacatata 65304
>gb|AC092940.6| Homo sapiens 3 BAC RP11-128L14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164805 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 557 caaaaaatacatctagataca 577 ||||||||||||||||||||| Sbjct: 143658 caaaaaatacatctagataca 143638
>gb|AC097661.3| Homo sapiens BAC clone RP11-553E15 from 4, complete sequence Length = 169197 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 tatctaaaacaaaaaatacat 568 ||||||||||||||||||||| Sbjct: 19568 tatctaaaacaaaaaatacat 19588
>gb|AC093820.2| Homo sapiens BAC clone RP11-373J7 from 4, complete sequence Length = 151878 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 548 tatctaaaacaaaaaatacat 568 ||||||||||||||||||||| Sbjct: 144605 tatctaaaacaaaaaatacat 144625
>dbj|AK142827.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930024D15 product:hypothetical protein, full insert sequence Length = 3581 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 2564 attcatgcatatatacatata 2544
>gb|AC158635.6| Mus musculus 10 BAC RP23-396A23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183931 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 tcagaagtccttaggatagcc 84 ||||||||||||||||||||| Sbjct: 4097 tcagaagtccttaggatagcc 4117
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 atatatacatatagtatgtagtact 501 ||||||||||||||||| ||||||| Sbjct: 10072862 atatatacatatagtatatagtact 10072886
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 483 acatatagtatgtagtactccttccgtcc 511 |||||| |||||||||||||| ||||||| Sbjct: 20187326 acatatggtatgtagtactccctccgtcc 20187298 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 taccaaactggatcaagaac 118 |||||||||||||||||||| Sbjct: 3348746 taccaaactggatcaagaac 3348765
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 tatgtagtactccttccgtcc 511 ||||||||||||||||||||| Sbjct: 143928 tatgtagtactccttccgtcc 143948
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 491 tatgtagtactccttccgtcc 511 ||||||||||||||||||||| Sbjct: 50321 tatgtagtactccttccgtcc 50341
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 atatatacatatagtatgtagtact 501 ||||||||||||||||| ||||||| Sbjct: 102166 atatatacatatagtatatagtact 102190
>dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0472F10 Length = 136076 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 483 acatatagtatgtagtactccttccgtcc 511 |||||| |||||||||||||| ||||||| Sbjct: 60632 acatatggtatgtagtactccctccgtcc 60604
>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1253_E02 Length = 166645 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 477 atatatacatatagtatgtagtact 501 ||||||||||||||||| ||||||| Sbjct: 32540 atatatacatatagtatatagtact 32564
>dbj|AB095748.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:Hito7711 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AK121044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053F03, full insert sequence Length = 5245 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 tatgtagtactccttccgtcc 511 ||||||||||||||||||||| Sbjct: 3997 tatgtagtactccttccgtcc 3977
>dbj|AB095756.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:E9002 Length = 4347 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095755.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:N9006 Length = 4874 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095754.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:E4504 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095753.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:N9017 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095752.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:E9003 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095751.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:N9001 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095750.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:E9001 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>dbj|AB095749.1| Cochliobolus heterostrophus Bmhk1 gene for two-component histidine kinase, complete cds, strain:N9013 Length = 4899 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 1050 attcatgcatatatacatata 1070
>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence Length = 153629 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatata 489 ||||||||||||||||||||| Sbjct: 2708 attcatgcatatatacatata 2728
>gb|AF548379.1| Aegilops tauschii isoamylase gene, complete cds Length = 9643 Score = 42.1 bits (21), Expect = 2.0 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 498 tactccttccgtcctgaattacttgtcatataaatggatagacatgaatgtatctaaaac 557 |||||| ||||||| ||| ||||||| | ||||||||| | ||| ||||||||| ||| Sbjct: 6088 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 6029 Query: 558 aaaaaatacatctagatacat 578 |||| ||| ||||||||||| Sbjct: 6028 taaaa-tacgtctagatacat 6009
>gb|AC137842.8| Mus musculus chromosome 15, clone RP23-91M6, complete sequence Length = 230609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 attcatgcatatatacatat 488 |||||||||||||||||||| Sbjct: 19698 attcatgcatatatacatat 19679
>gb|AF133093.2| Mus musculus chromosome X clones CT7-116D19, CT7-309B4, CT7-567G9, MGSPI-15528, MGSPI-15530 complete sequence Length = 235497 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tctccaaagtggaatcaggt 210 |||||||||||||||||||| Sbjct: 179782 tctccaaagtggaatcaggt 179801
>gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21-12I6 complete sequence Length = 193449 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tctccaaagtggaatcaggt 210 |||||||||||||||||||| Sbjct: 20102 tctccaaagtggaatcaggt 20121
>gb|DQ226855.1| Boechera divaricarpa isolate SLW-C-D12 mRNA sequence Length = 250 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 atataaatggatagacatga 544 |||||||||||||||||||| Sbjct: 13 atataaatggatagacatga 32
>gb|AC147171.3| Xenopus tropicalis clone CH216-162P3, complete sequence Length = 156475 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 131325 atatatacatatagtatgta 131306
>gb|AC122264.3| Mus musculus BAC clone RP23-197G20 from chromosome 12, complete sequence Length = 199646 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 atgcatatatacatatagta 492 |||||||||||||||||||| Sbjct: 178797 atgcatatatacatatagta 178816
>gb|AC124378.3| Mus musculus BAC clone RP24-397F8 from chromosome 12, complete sequence Length = 140121 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 atgcatatatacatatagta 492 |||||||||||||||||||| Sbjct: 69258 atgcatatatacatatagta 69277
>gb|AC122337.4| Mus musculus BAC clone RP23-351M10 from chromosome 12, complete sequence Length = 196396 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 catatatacatatagtatgt 495 |||||||||||||||||||| Sbjct: 38380 catatatacatatagtatgt 38399
>gb|AC122928.4| Mus musculus BAC clone RP23-10G8 from 9, complete sequence Length = 205725 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 aaaaaatacatctagataca 577 |||||||||||||||||||| Sbjct: 146124 aaaaaatacatctagataca 146143
>gb|AC110422.3| Mus musculus BAC clone RP24-198G12 from 2, complete sequence Length = 111357 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 atgaatgtatctaaaacaaa 560 |||||||||||||||||||| Sbjct: 95718 atgaatgtatctaaaacaaa 95737
>gb|AC120138.9| Mus musculus chromosome 1, clone RP23-283D3, complete sequence Length = 216381 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tatttaagagaaatccttgt 246 |||||||||||||||||||| Sbjct: 91029 tatttaagagaaatccttgt 91010
>gb|AC115051.6| Mus musculus chromosome 1, clone RP24-340A23, complete sequence Length = 158391 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatat 488 |||||||||||||||||||| Sbjct: 39751 attcatgcatatatacatat 39770
>emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in linkage group 13, complete sequence Length = 209449 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgttcctttaattagttaca 354 |||||||||||||||||||| Sbjct: 65490 tgttcctttaattagttaca 65471
>emb|AL133330.14| Human DNA sequence from clone RP1-68D18 on chromosome 11p12-13 Contains part of the SLC1A2 gene for three variants of solute carrier family 1 (glial high affinity glutamate transporter) member 2 and part of the CD44 gene for CD44 antigen (homing function and Indian blood group system) with five variants, complete sequence Length = 183682 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 atgcatatatacatatagtatgta 496 ||||||||||||||| |||||||| Sbjct: 176370 atgcatatatacataaagtatgta 176393
>emb|AL645488.6| Human DNA sequence from clone RP11-33J1 on chromosome 1 Contains a CpG island, complete sequence Length = 105641 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 catgcatatatacatatagtatgt 495 |||||||||||||||||| ||||| Sbjct: 62945 catgcatatatacatatattatgt 62922
>emb|AL449104.5| Human DNA sequence from clone RP1-173P22 on chromosome 6 Contains the 3' end of the HCRTR2 gene for hypocretin (orexin) receptor 2, complete sequence Length = 120466 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttaggatagccgagcttcttgcaa 97 |||||||||| ||||||||||||| Sbjct: 115174 ttaggatagctgagcttcttgcaa 115151
>emb|AL365498.21| Human DNA sequence from clone RP11-319I23 on chromosome 10 Contains three novel genes, complete sequence Length = 176508 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 gtcctgaattacttgtcatataaa 531 |||| ||||||||||||||||||| Sbjct: 79131 gtccagaattacttgtcatataaa 79108
>emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on chromosome 1 Contains the 5' end of the SPATA6 gene for spermatogenesis associated 6, an amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2 (ALS2CR2) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 173373 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 tgtatctaaaacaaaaaatacatc 569 ||||||||||||||| |||||||| Sbjct: 33748 tgtatctaaaacaaagaatacatc 33771
>emb|AL357515.26| Human DNA sequence from clone RP11-397G5 on chromosome 6 Contains the 3' end of the AMD1 gene for S-adenosylmethionine decarboxylase 1, two novel genes, a glutathione S-transferase M2 (muscle) (GSTM2) pseudogene and three CpG islands, complete sequence Length = 190440 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tgtatctaaaacaaaaaata 565 |||||||||||||||||||| Sbjct: 57926 tgtatctaaaacaaaaaata 57945
>emb|AL138816.12| Human DNA sequence from clone RP11-235O20 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to heparan sulfate 6-sulfotransferase, complete sequence Length = 142420 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 98595 ttcatgcatatatacatata 98614
>emb|AL033520.16|HS349A12 Human DNA sequence from clone RP3-349A12 on chromosome 6p21.31-22.2 Contains the 3' end of gene FLJ20302, the TAF11 gene for TAF11 RNA polymerase II (TATA box binding protein (TBP)-associated factor, 28 kD), the 5' end of gene KIAA0229 for novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein (KIAA0229) and a CpG island, complete sequence Length = 132948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 catatatacatatagtatgt 495 |||||||||||||||||||| Sbjct: 11760 catatatacatatagtatgt 11779
>gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 genomic sequence, complete sequence Length = 130058 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 492 atgtagtactccttccgtcctgaattac 519 |||||||||||| ||||| ||||||||| Sbjct: 55238 atgtagtactccatccgttctgaattac 55211
>gb|DQ123819.1| Triticum turgidum floral homeotic homeoallele (q) gene, complete sequence Length = 3321 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 497 gtactccttccgtcctgaattacttgtc 524 ||||||| ||||| |||||||||||||| Sbjct: 2835 gtactccctccgttctgaattacttgtc 2862
>emb|AL928906.4| Zebrafish DNA sequence from clone RP71-34G2 in linkage group 7 Contains a novel gene, a novel gene similar to human and mouse ORCL6 (origin recognition complex, subunit 6 homolog-like (yeast)), a novel gene simlar to human and mouse VPS35 (vacuolar protein sorting 35 (yeast)), a novel gene similar to human HRH3 (histamine receptor H3), a novel gene similar to human and rat ARL5 (ADP-ribosylation factor-like 5) and a CpG island, complete sequence Length = 161527 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ttgattcatgcatatataca 485 |||||||||||||||||||| Sbjct: 139991 ttgattcatgcatatataca 139972
>emb|AL691521.7| Zebrafish DNA sequence from clone BUSM1-186K12 in linkage group 7 Contains then men1 gene for multiple endocrine neoplasia type 1 (menin 1), a gene for a novel protein kinase, three gene for novel immune-type receptors and a CpG island, complete sequence Length = 109831 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 atctaaaacaaaaaatacat 568 |||||||||||||||||||| Sbjct: 71895 atctaaaacaaaaaatacat 71914
>emb|AL592105.14| Zebrafish DNA sequence from clone BUSM1-150L22 in linkage group 7 Contains the 3' part of the men1 gene (multiple endocrine neoplasia type 1 (menin 1)), a gene for a novel protein kinase, three genes for novel immune-type receptor, a novel immune-type receptor pseudogene, the nitr4.2, nitr5.3 and nitr1.23 genes (novel immune-type receptor 4.2, 5.3 and 1.23), a novel gene and a CpG island, complete sequence Length = 106023 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 atctaaaacaaaaaatacat 568 |||||||||||||||||||| Sbjct: 7218 atctaaaacaaaaaatacat 7199
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 497 gtactccttccgtcctgaattacttgtc 524 ||||| |||||||||| ||||||||||| Sbjct: 117404 gtactacttccgtcctaaattacttgtc 117431
>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12 Length = 109155 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 33014 atatatacatatagtatgta 33033
>gb|AC107025.3| Homo sapiens 3 BAC RP11-474M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178033 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 24265 atatatacatatagtatgta 24284
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 497 gtactccttccgtcctgaattacttgtc 524 ||||||||||||||| ||||||||||| Sbjct: 102315 gtactccttccgtcccaaattacttgtc 102288
>gb|AC093182.3| Homo sapiens chromosome 7 clone RP11-19B3, complete sequence Length = 155164 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 10120 atatatacatatagtatgta 10139
>ref|NM_141502.2| Drosophila melanogaster CG10435-RA (CG10435), mRNA Length = 1817 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ctccgactggctgagcgcat 394 |||||||||||||||||||| Sbjct: 1227 ctccgactggctgagcgcat 1208
>gb|AC112910.3| Homo sapiens 3 BAC RP11-273F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115927 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 catgcatatatacatatagtatgt 495 |||| ||||||||||||||||||| Sbjct: 65046 catgtatatatacatatagtatgt 65069
>gb|AY062031.1| Homo sapiens hypocretin receptor 2 (HCRTR2) gene, complete cds Length = 168575 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ttaggatagccgagcttcttgcaa 97 |||||||||| ||||||||||||| Sbjct: 149853 ttaggatagctgagcttcttgcaa 149830
>gb|AY061473.1| Drosophila melanogaster LD44032 full length cDNA Length = 1775 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 ctccgactggctgagcgcat 394 |||||||||||||||||||| Sbjct: 1164 ctccgactggctgagcgcat 1145
>gb|AC008093.4|AC008093 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone BACR07M14, complete sequence Length = 181950 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ctccgactggctgagcgcat 394 |||||||||||||||||||| Sbjct: 62250 ctccgactggctgagcgcat 62269
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 497 gtactccttccgtcctgaattacttgtc 524 ||||| |||||||||| ||||||||||| Sbjct: 16588171 gtactacttccgtcctaaattacttgtc 16588198
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 497 gtactccttccgtcctgaattacttgtc 524 ||||||||||||||| ||||||||||| Sbjct: 20462167 gtactccttccgtcccaaattacttgtc 20462140 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 492 atgtagtactccttccgtcctgaattac 519 |||||||||||| ||||| ||||||||| Sbjct: 18693960 atgtagtactccatccgttctgaattac 18693933
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 7098991 ttcatgcatatatacatata 7099010 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 6801878 ttcatgcatatatacatata 6801897
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 ttgattcatgcatatatacatata 489 |||||||||||||||||| ||||| Sbjct: 34395191 ttgattcatgcatatatatatata 34395214
>gb|AC083814.17|AC083814 Mus musculus 7 BAC RP23-129J16 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 191410 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 tttcaaagaatatggtattt 231 |||||||||||||||||||| Sbjct: 55704 tttcaaagaatatggtattt 55685
>gb|AC090886.1|AC090886 Homo sapiens chromosome 3 clone RP11-320K24 map 3p, complete sequence Length = 168778 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 80187 atatatacatatagtatgta 80206
>gb|AC090645.1|AC090645 Homo sapiens chromosome 3 clone RP11-556G18 map 3p, complete sequence Length = 162869 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 90121 atatatacatatagtatgta 90102
>gb|AC009518.9| Homo sapiens chromosome 7 clone RP11-193I17, complete sequence Length = 176209 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 70437 atatatacatatagtatgta 70418
>gb|AC122783.16| Mus musculus chromosome 15, clone RP24-224O11, complete sequence Length = 178493 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatat 488 |||||||||||||||||||| Sbjct: 36389 attcatgcatatatacatat 36408
>gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, complete sequence Length = 111000 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 catgcatatatacatatagtatgt 495 |||| ||||||||||||||||||| Sbjct: 37555 catgtatatatacatatagtatgt 37532
>gb|AC158631.6| Mus musculus 10 BAC RP23-424I1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206425 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 catgcatatatacatatagt 491 |||||||||||||||||||| Sbjct: 198531 catgcatatatacatatagt 198550
>gb|AC093495.2| Homo sapiens chromosome 3 clone RP11-434D12 map 3p, complete sequence Length = 173066 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 132955 atatatacatatagtatgta 132974
>gb|AC090004.2| Homo sapiens chromosome 3 clone RP11-14A10 map 3p, complete sequence Length = 169596 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 477 atatatacatatagtatgta 496 |||||||||||||||||||| Sbjct: 17630 atatatacatatagtatgta 17649
>gb|AC069252.4|AC069252 Genomic sequence for Arabidopsis thaliana BAC F2E2 from chromosome I, complete sequence Length = 91825 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 actcagttcttataatgcaa 448 |||||||||||||||||||| Sbjct: 7015 actcagttcttataatgcaa 6996
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 466 ttgattcatgcatatatacatata 489 |||||||||||||||||| ||||| Sbjct: 77535 ttgattcatgcatatatatatata 77558
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ttcctttaattagttacatt 356 |||||||||||||||||||| Sbjct: 113805 ttcctttaattagttacatt 113824
>emb|BX649250.6| Zebrafish DNA sequence from clone DKEY-53B2 in linkage group 20, complete sequence Length = 165729 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 atatatacatatagtatgtagtac 500 ||||||| |||||||||||||||| Sbjct: 131306 atatatatatatagtatgtagtac 131329
>dbj|AP004126.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ9003_G05 Length = 141860 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 taccaaactggatcaagaac 118 |||||||||||||||||||| Sbjct: 97606 taccaaactggatcaagaac 97625
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 52597 ttcatgcatatatacatata 52616
>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0089L03 Length = 172106 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 154280 ttcatgcatatatacatata 154299
>emb|AL807237.17| Mouse DNA sequence from clone RP23-384O9 on chromosome X, complete sequence Length = 162709 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tgattcatgcatatatacat 486 |||||||||||||||||||| Sbjct: 39287 tgattcatgcatatatacat 39306
>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0674B07 Length = 192191 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 144477 ttcatgcatatatacatata 144496
>ref|XM_313585.2| Anopheles gambiae str. PEST ENSANGP00000013327 (ENSANGG00000010838), partial mRNA Length = 936 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tcctgggcatttttgtactt 312 |||||||||||||||||||| Sbjct: 413 tcctgggcatttttgtactt 394
>gb|AC005385.3|AC005385 citb_10_k_1, complete sequence Length = 127203 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 gtcctgaattacttgtcatataaa 531 |||| ||||||||||||||||||| Sbjct: 47090 gtccagaattacttgtcatataaa 47067
>emb|AL732544.12| Zebrafish DNA sequence from clone BUSM1-6I1 in linkage group 7, complete sequence Length = 135141 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 atctaaaacaaaaaatacat 568 |||||||||||||||||||| Sbjct: 49362 atctaaaacaaaaaatacat 49381
>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the complete sequence Length = 228314 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 ctccgactggctgagcgcat 394 |||||||||||||||||||| Sbjct: 40645 ctccgactggctgagcgcat 40664
>gb|AC113326.9| Mus musculus chromosome 1, clone RP23-454G7, complete sequence Length = 192734 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 attcatgcatatatacatat 488 |||||||||||||||||||| Sbjct: 178989 attcatgcatatatacatat 179008
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 497 gtactccttccgtcctgaattacttgtc 524 ||||||||||||||| ||||||||||| Sbjct: 20473439 gtactccttccgtcccaaattacttgtc 20473412 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 492 atgtagtactccttccgtcctgaattac 519 |||||||||||| ||||| ||||||||| Sbjct: 18704813 atgtagtactccatccgttctgaattac 18704786
>gb|AC132589.4| Mus musculus BAC clone RP24-258M24 from 1, complete sequence Length = 168097 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 gatcaagaacaacatcagtt 128 |||||||||||||||||||| Sbjct: 137146 gatcaagaacaacatcagtt 137165
>emb|AL773590.8| Mouse DNA sequence from clone RP23-181A13 on chromosome 2, complete sequence Length = 185348 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 atgaatgtatctaaaacaaa 560 |||||||||||||||||||| Sbjct: 112386 atgaatgtatctaaaacaaa 112367
>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete sequence Length = 225712 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tctccaaagtggaatcaggt 210 |||||||||||||||||||| Sbjct: 23371 tctccaaagtggaatcaggt 23390
>emb|AL808118.8| Mouse DNA sequence from clone RP23-287O8 on chromosome 4, complete sequence Length = 164068 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 ttcatgcatatatacatata 489 |||||||||||||||||||| Sbjct: 6148 ttcatgcatatatacatata 6129
>emb|AL121579.4|CNS01DRX Human chromosome 14 DNA sequence BAC R-349A22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161771 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 atgcatatatacatatagtatgta 496 |||||||||||| ||||||||||| Sbjct: 132725 atgcatatatacttatagtatgta 132702 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,399,888 Number of Sequences: 3902068 Number of extensions: 6399888 Number of successful extensions: 163372 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 162320 Number of HSP's gapped (non-prelim): 1054 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
