ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29m13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009263.1| Triticum aestivum clone wlk4.pk0023.a11:fis, full insert mRNA sequence Length = 766 Score = 692 bits (349), Expect = 0.0 Identities = 398/413 (96%), Gaps = 1/413 (0%) Strand = Plus / Plus Query: 1 cgccatggnaggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcact 60 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 348 cgccatgg-aggagatcagcagggcgtccgggtcggtcggcctttcctacggtgcacact 406 Query: 61 caaatctgtgcatcaaccagctggtccgtcatggcagccctacccaaaaggaaaagtatt 120 ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 407 caaatctctgcatcaaccagctggtccgtcatggcagccctgcccaaaaggaaaagtatt 466 Query: 121 tgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctg 180 |||| ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 467 tgccgaagcttatcagtggggagcatattggggcattggcgatgagtgaaccaaactctg 526 Query: 181 gctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcatta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 gctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcatta 586 Query: 241 atgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcga 300 | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 587 acgggaacaagatgtggtgcacaaatggtccgtctgctcagacattggttgtttacgcga 646 Query: 301 aaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgc 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 647 aaacagatataactgctggatcgaaaggaataactgcattcataattgagaagggaatgc 706 Query: 361 cagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgac 413 | |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 707 ccgggttcagtactgcccagaagttggacaaacttggcatgcgaggaagtgac 759
>ref|XM_475553.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1230 Score = 583 bits (294), Expect = e-163 Identities = 465/522 (89%) Strand = Plus / Plus Query: 10 aggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgt 69 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 305 aggagatcagcagggcgtccggctcggtcggcctgtcttacggcgctcactccaacctct 364 Query: 70 gcatcaaccagctggtccgtcatggcagccctacccaaaaggaaaagtatttgccaaagc 129 |||| |||||||||||||| |||||||||||| |||||||| ||||| || ||||||| Sbjct: 365 gcattaaccagctggtccggcatggcagccctgcccaaaagctcaagtacttaccaaagc 424 Query: 130 taatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctctgatg 189 ||||||||||||| ||| | ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 425 taatcagtggggagcatgtgggggcattggcgatgagcgaacccaactctggttctgatg 484 Query: 190 ttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaatgggaata 249 ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| Sbjct: 485 ttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtcattaacgggaata 544 Query: 250 agatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaaacagata 309 ||||||||||||| || || ||||||||||||||| ||||||| || || |||||||||| Sbjct: 545 agatgtggtgcaccaacgggccatctgctcagacactggttgtgtatgcaaaaacagata 604 Query: 310 taactgctggatcgaaaggaataactgcattcataattgagaaggggatgccagggttca 369 || |||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 605 tagctgctggatcaaaaggaataaccgcgttcataattgagaaggggatgcccgggttca 664 Query: 370 gtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgagcttgtct 429 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| | Sbjct: 665 gtactgcacagaagttggacaagcttggcatgagaggaagtgacacatgtgagcttgtgt 724 Query: 430 ttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggtgtttatg 489 | ||||| || |||||||| | || || ||||| || |||||||| ||||||||||||| Sbjct: 725 tcgagaattgttttgtgccccatgaaaacgttctcggggaagaagggaaaggtgtttatg 784 Query: 490 tcatgatgtctggtcttgatctggaaagacttgtattagctg 531 |||||||||| || |||||||| ||||||||||| ||||||| Sbjct: 785 tcatgatgtcagggcttgatctagaaagacttgtgttagctg 826
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 583 bits (294), Expect = e-163 Identities = 465/522 (89%) Strand = Plus / Plus Query: 10 aggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgt 69 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 568 aggagatcagcagggcgtccggctcggtcggcctgtcttacggcgctcactccaacctct 627 Query: 70 gcatcaaccagctggtccgtcatggcagccctacccaaaaggaaaagtatttgccaaagc 129 |||| |||||||||||||| |||||||||||| |||||||| ||||| || ||||||| Sbjct: 628 gcattaaccagctggtccggcatggcagccctgcccaaaagctcaagtacttaccaaagc 687 Query: 130 taatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctctgatg 189 ||||||||||||| ||| | ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 688 taatcagtggggagcatgtgggggcattggcgatgagcgaacccaactctggttctgatg 747 Query: 190 ttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaatgggaata 249 ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| Sbjct: 748 ttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtcattaacgggaata 807 Query: 250 agatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaaacagata 309 ||||||||||||| || || ||||||||||||||| ||||||| || || |||||||||| Sbjct: 808 agatgtggtgcaccaacgggccatctgctcagacactggttgtgtatgcaaaaacagata 867 Query: 310 taactgctggatcgaaaggaataactgcattcataattgagaaggggatgccagggttca 369 || |||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 868 tagctgctggatcaaaaggaataaccgcgttcataattgagaaggggatgcccgggttca 927 Query: 370 gtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgagcttgtct 429 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| | Sbjct: 928 gtactgcacagaagttggacaagcttggcatgagaggaagtgacacatgtgagcttgtgt 987 Query: 430 ttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggtgtttatg 489 | ||||| || |||||||| | || || ||||| || |||||||| ||||||||||||| Sbjct: 988 tcgagaattgttttgtgccccatgaaaacgttctcggggaagaagggaaaggtgtttatg 1047 Query: 490 tcatgatgtctggtcttgatctggaaagacttgtattagctg 531 |||||||||| || |||||||| ||||||||||| ||||||| Sbjct: 1048 tcatgatgtcagggcttgatctagaaagacttgtgttagctg 1089
>dbj|AK066314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064C04, full insert sequence Length = 1500 Score = 583 bits (294), Expect = e-163 Identities = 465/522 (89%) Strand = Plus / Plus Query: 10 aggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgt 69 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 405 aggagatcagcagggcgtccggctcggtcggcctgtcttacggcgctcactccaacctct 464 Query: 70 gcatcaaccagctggtccgtcatggcagccctacccaaaaggaaaagtatttgccaaagc 129 |||| |||||||||||||| |||||||||||| |||||||| ||||| || ||||||| Sbjct: 465 gcattaaccagctggtccggcatggcagccctgcccaaaagctcaagtacttaccaaagc 524 Query: 130 taatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctctgatg 189 ||||||||||||| ||| | ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct: 525 taatcagtggggagcatgtgggggcattggcgatgagcgaacccaactctggttctgatg 584 Query: 190 ttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcattaatgggaata 249 ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| Sbjct: 585 ttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtcattaacgggaata 644 Query: 250 agatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaaacagata 309 ||||||||||||| || || ||||||||||||||| ||||||| || || |||||||||| Sbjct: 645 agatgtggtgcaccaacgggccatctgctcagacactggttgtgtatgcaaaaacagata 704 Query: 310 taactgctggatcgaaaggaataactgcattcataattgagaaggggatgccagggttca 369 || |||||||||| ||||||||||| || ||||||||||||||||||||||| ||||||| Sbjct: 705 tagctgctggatcaaaaggaataaccgcgttcataattgagaaggggatgcccgggttca 764 Query: 370 gtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgagcttgtct 429 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| | Sbjct: 765 gtactgcacagaagttggacaagcttggcatgagaggaagtgacacatgtgagcttgtgt 824 Query: 430 ttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggtgtttatg 489 | ||||| || |||||||| | || || ||||| || |||||||| ||||||||||||| Sbjct: 825 tcgagaattgttttgtgccccatgaaaacgttctcggggaagaagggaaaggtgtttatg 884 Query: 490 tcatgatgtctggtcttgatctggaaagacttgtattagctg 531 |||||||||| || |||||||| ||||||||||| ||||||| Sbjct: 885 tcatgatgtcagggcttgatctagaaagacttgtgttagctg 926
>gb|AY107381.1| Zea mays PCO061330 mRNA sequence Length = 1531 Score = 521 bits (263), Expect = e-145 Identities = 465/531 (87%), Gaps = 1/531 (0%) Strand = Plus / Plus Query: 1 cgccatggnaggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcact 60 |||||||| ||||||| | |||||| ||||| | |||||||| |||||||| ||||||| Sbjct: 385 cgccatgg-aggagatcaccagggcatccggcgccgtcggcctctcctacggcgcgcact 443 Query: 61 caaatctgtgcatcaaccagctggtccgtcatggcagccctacccaaaaggaaaagtatt 120 | || || |||||||||||||| ||||| || ||||| || || ||| |||||| Sbjct: 444 ccaacctctgcatcaaccagctcgtccggcacggcagtcccgagcagaagctcaagtatc 503 Query: 121 tgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctg 180 |||| ||||| ||||||||||| ||||| |||||| |||| ||||||||||| ||||||| Sbjct: 504 tgcccaagctgatcagtggggagcatatcggggcactggcgatgagtgaacccaactctg 563 Query: 181 gctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtcatta 240 |||||||||| ||||| ||||||||||||||||||||||| || || ||||||||| ||| Sbjct: 564 gctctgatgtcgtcagcatgaagtgcaaagctgagaaagtggacggtggctatgtcctta 623 Query: 241 atgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcga 300 |||||||||||||||||||||| ||||| || |||||||||||| ||||||||||||| | Sbjct: 624 atgggaataagatgtggtgcaccaatggcccgtctgctcagacactggttgtttacgcaa 683 Query: 301 aaacagatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgc 360 |||||||| || |||| || || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 684 aaacagatctagctgcagggtcaaaaggaataactgcattcataatcgagaaagggatgc 743 Query: 361 cagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtg 420 | |||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 744 ccgggttcagtactgctcagaagttggacaaacttggcatgagaggaagcgacacgtgtg 803 Query: 421 agcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaag 480 ||||||| |||||||||||||||||||| | || ||||| || ||||||||||| |||| Sbjct: 804 agcttgtttttgagaactgctttgtgccatgcgaaaatgtcctcggtgaagaaggcaaag 863 Query: 481 gtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctg 531 ||||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 864 gtgtttatgtcatgatgtcagggcttgatctggaaaggcttgtattagctg 914
>gb|BT017728.1| Zea mays clone EL01N0447H09.c mRNA sequence Length = 942 Score = 394 bits (199), Expect = e-106 Identities = 295/327 (90%) Strand = Plus / Plus Query: 205 gcaaagctgagaaagtagatggcggctatgtcattaatgggaataagatgtggtgcacaa 264 |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||| | Sbjct: 8 gcaaagctgagaaagtggacggcggctatgtccttaatgggaataagatgtggtgcacca 67 Query: 265 atggtccatctgctcagacattggttgtttacgcgaaaacagatataactgctggatcga 324 |||| || ||||||||||| |||||||||| || ||||||||| || |||| ||||| | Sbjct: 68 atgggccgtctgctcagacgctggttgtttatgcaaaaacagatctagctgcgggatcaa 127 Query: 325 aaggaataactgcattcataattgagaaggggatgccagggttcagtactgcacagaagt 384 |||||||||||||||||||||| ||||| |||||||| |||||||| |||| ||||| | Sbjct: 128 aaggaataactgcattcataatcgagaaagggatgcccgggttcagggctgctcagaaat 187 Query: 385 tggacaaacttggcatgcgaggaagtgacacatgtgagcttgtctttgagaactgctttg 444 ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 188 tggacaaacttggcatgagaggaagcgacacatgtgagcttgtttttgagaactgctttg 247 Query: 445 tgcctcgagagaatgttcttggtgaagaaggaaaaggtgtttatgtcatgatgtctggtc 504 |||| || |||||||| || ||||||||||| ||||||||||||||||||||||| || | Sbjct: 248 tgccacgcgagaatgtcctcggtgaagaaggcaaaggtgtttatgtcatgatgtcagggc 307 Query: 505 ttgatctggaaagacttgtattagctg 531 ||||||||||||| ||||||||||||| Sbjct: 308 ttgatctggaaaggcttgtattagctg 334
>gb|BT016848.1| Zea mays clone Contig681 mRNA sequence Length = 855 Score = 347 bits (175), Expect = 2e-92 Identities = 259/287 (90%) Strand = Plus / Minus Query: 245 gaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacgcgaaaac 304 |||||||||||||||||| ||||| || |||||||||||| ||||||||||||| ||||| Sbjct: 855 gaataagatgtggtgcaccaatggcccgtctgctcagacactggttgtttacgcaaaaac 796 Query: 305 agatataactgctggatcgaaaggaataactgcattcataattgagaaggggatgccagg 364 |||| || |||| || || ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 795 agatctagctgcagggtcaaaaggaataactgcattcataatcgagaaagggatgcccgg 736 Query: 365 gttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacacatgtgagct 424 |||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||| Sbjct: 735 gttcagtactgctcagaagttggacaaacttggcatgagaggaagcgacacgtgtgagct 676 Query: 425 tgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaaggaaaaggtgt 484 ||| |||||||||||||||||||| | || ||||| || ||||||||||| |||||||| Sbjct: 675 tgtttttgagaactgctttgtgccatgcgaaaatgtcctcggtgaagaaggcaaaggtgt 616 Query: 485 ttatgtcatgatgtctggtcttgatctggaaagacttgtattagctg 531 ||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 615 ttatgtcatgatgtcagggcttgatctggaaaggcttgtattagctg 569
>emb|AJ278988.1|STU278988 Solanum tuberosum partial mRNA for isovaleryl-CoA dehydrogenase (ivd2 gene) Length = 1415 Score = 232 bits (117), Expect = 9e-58 Identities = 336/409 (82%) Strand = Plus / Plus Query: 112 aaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaac 171 |||||||| | ||||||||||||||||| || ||| | ||||| | || |||||||||| Sbjct: 383 aaaagtatctaccaaagctaatcagtggtgagcatgtgggggctctagctatgagtgaac 442 Query: 172 caaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggct 231 | | |||| || |||||||| || ||||||||||||||||| || || || || | Sbjct: 443 ctgatgctggatcagatgttgttagcatgaagtgcaaagctgaccgtgttgagggtggtt 502 Query: 232 atgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttg 291 |||| | ||||| || || ||||||||||||||||||||| | |||||||| |||||| Sbjct: 503 atgttctgaatggaaacaaaatgtggtgcacaaatggtccaacggctcagacgctggttg 562 Query: 292 tttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataattgaga 351 |||| || ||||||||| | || ||| | || |||||||| || |||||||| || |||| Sbjct: 563 tttatgcaaaaacagatgtcacagctagttcaaaaggaatcacagcattcattatcgaga 622 Query: 352 aggggatgccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtg 411 |||| ||| |||| ||| |||||| ||||| || ||||||||||| ||||||||||||| Sbjct: 623 agggaatgacaggattctctactgcccagaaattagacaaacttgggatgcgaggaagtg 682 Query: 412 acacatgtgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaag 471 |||||||||||||||| ||||||||||| || || ||| ||| |||||||| || ||| Sbjct: 683 acacatgtgagcttgtgtttgagaactgtttcgttcctgaagaaaatgttctggggcaag 742 Query: 472 aaggaaaaggtgtttatgtcatgatgtctggtcttgatctggaaagact 520 ||||||||| ||||||||| ||||||| || || |||||||||||||| Sbjct: 743 taggaaaaggagtttatgtcctgatgtcggggctcgatctggaaagact 791
>ref|NM_114399.3| Arabidopsis thaliana IVD (ISOVALERYL-COA-DEHYDROGENASE) AT3G45300 (IVD) mRNA, complete cds Length = 2014 Score = 214 bits (108), Expect = 2e-52 Identities = 282/340 (82%) Strand = Plus / Plus Query: 103 cccaaaaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaa 162 |||||||||||||||||||||||||||| |||||||| || ||| |||| || | |||| Sbjct: 598 cccaaaaggaaaagtatttgccaaagcttatcagtggagagcatgttggtgctcttgcaa 657 Query: 163 tgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtag 222 |||||||||| || |||| || |||||||| | ||||| ||||| |||||||| |||| Sbjct: 658 tgagtgaacctaatgctggttcagatgttgttggcatgaaatgcaaggctgagaaggtag 717 Query: 223 atggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcaga 282 |||| || ||| | | ||||| || |||||||||||||| ||||||||||||||| | | Sbjct: 718 atggtggttatatactaaatggcaacaagatgtggtgcactaatggtccatctgctgaaa 777 Query: 283 cattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattca 342 || ||||||||||||||||||| |||| || || || || |||||||| || || |||| Sbjct: 778 cactggttgtttacgcgaaaactgatacaaaagcaggttccaaaggaatcacggctttca 837 Query: 343 taattgagaaggggatgccagggttcagtactgcacagaagttggacaaacttggcatgc 402 | || ||||| || ||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct: 838 tcatagagaaaggaatgaccggattcagtactgctcagaaattggacaaactaggaatgc 897 Query: 403 gaggaagtgacacatgtgagcttgtctttgagaactgctt 442 | ||||| || || ||||||||||| |||||||| ||||| Sbjct: 898 ggggaagcgatacgtgtgagcttgtttttgagaattgctt 937
>emb|Y12695.1|ATISOVAL A.thaliana mRNA for isovaleryl-CoA dehydrogenase Length = 1321 Score = 214 bits (108), Expect = 2e-52 Identities = 282/340 (82%) Strand = Plus / Plus Query: 103 cccaaaaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaa 162 |||||||||||||||||||||||||||| |||||||| || ||| |||| || | |||| Sbjct: 448 cccaaaaggaaaagtatttgccaaagcttatcagtggagagcatgttggtgctcttgcaa 507 Query: 163 tgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtag 222 |||||||||| || |||| || |||||||| | ||||| ||||| |||||||| |||| Sbjct: 508 tgagtgaacctaatgctggttcagatgttgttggcatgaaatgcaaggctgagaaggtag 567 Query: 223 atggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcaga 282 |||| || ||| | | ||||| || |||||||||||||| ||||||||||||||| | | Sbjct: 568 atggtggttatatactaaatggcaacaagatgtggtgcactaatggtccatctgctgaaa 627 Query: 283 cattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattca 342 || ||||||||||||||||||| |||| || || || || |||||||| || || |||| Sbjct: 628 cactggttgtttacgcgaaaactgatacaaaagcaggttccaaaggaatcacggctttca 687 Query: 343 taattgagaaggggatgccagggttcagtactgcacagaagttggacaaacttggcatgc 402 | || ||||| || ||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct: 688 tcatagagaaaggaatgaccggattcagtactgctcagaaattggacaaactaggaatgc 747 Query: 403 gaggaagtgacacatgtgagcttgtctttgagaactgctt 442 | ||||| || || ||||||||||| |||||||| ||||| Sbjct: 748 ggggaagcgatacgtgtgagcttgtttttgagaattgctt 787
>gb|AY128799.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor IVD (At3g45300) mRNA, complete cds Length = 1416 Score = 214 bits (108), Expect = 2e-52 Identities = 282/340 (82%) Strand = Plus / Plus Query: 103 cccaaaaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaa 162 |||||||||||||||||||||||||||| |||||||| || ||| |||| || | |||| Sbjct: 398 cccaaaaggaaaagtatttgccaaagcttatcagtggagagcatgttggtgctcttgcaa 457 Query: 163 tgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtag 222 |||||||||| || |||| || |||||||| | ||||| ||||| |||||||| |||| Sbjct: 458 tgagtgaacctaatgctggttcagatgttgttggcatgaaatgcaaggctgagaaggtag 517 Query: 223 atggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcaga 282 |||| || ||| | | ||||| || |||||||||||||| ||||||||||||||| | | Sbjct: 518 atggtggttatatactaaatggcaacaagatgtggtgcactaatggtccatctgctgaaa 577 Query: 283 cattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattca 342 || ||||||||||||||||||| |||| || || || || |||||||| || || |||| Sbjct: 578 cactggttgtttacgcgaaaactgatacaaaagcaggttccaaaggaatcacggctttca 637 Query: 343 taattgagaaggggatgccagggttcagtactgcacagaagttggacaaacttggcatgc 402 | || ||||| || ||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct: 638 tcatagagaaaggaatgaccggattcagtactgctcagaaattggacaaactaggaatgc 697 Query: 403 gaggaagtgacacatgtgagcttgtctttgagaactgctt 442 | ||||| || || ||||||||||| |||||||| ||||| Sbjct: 698 ggggaagcgatacgtgtgagcttgtttttgagaattgctt 737
>gb|AY062567.1| Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD) (F18N11.6) mRNA, complete cds Length = 1477 Score = 214 bits (108), Expect = 2e-52 Identities = 282/340 (82%) Strand = Plus / Plus Query: 103 cccaaaaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaa 162 |||||||||||||||||||||||||||| |||||||| || ||| |||| || | |||| Sbjct: 428 cccaaaaggaaaagtatttgccaaagcttatcagtggagagcatgttggtgctcttgcaa 487 Query: 163 tgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtag 222 |||||||||| || |||| || |||||||| | ||||| ||||| |||||||| |||| Sbjct: 488 tgagtgaacctaatgctggttcagatgttgttggcatgaaatgcaaggctgagaaggtag 547 Query: 223 atggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcaga 282 |||| || ||| | | ||||| || |||||||||||||| ||||||||||||||| | | Sbjct: 548 atggtggttatatactaaatggcaacaagatgtggtgcactaatggtccatctgctgaaa 607 Query: 283 cattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattca 342 || ||||||||||||||||||| |||| || || || || |||||||| || || |||| Sbjct: 608 cactggttgtttacgcgaaaactgatacaaaagcaggttccaaaggaatcacggctttca 667 Query: 343 taattgagaaggggatgccagggttcagtactgcacagaagttggacaaacttggcatgc 402 | || ||||| || ||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct: 668 tcatagagaaaggaatgaccggattcagtactgctcagaaattggacaaactaggaatgc 727 Query: 403 gaggaagtgacacatgtgagcttgtctttgagaactgctt 442 | ||||| || || ||||||||||| |||||||| ||||| Sbjct: 728 ggggaagcgatacgtgtgagcttgtttttgagaattgctt 767
>gb|AF160729.1|AF160729 Arabidopsis thaliana isovaleryl-CoA-dehydrogenase precursor (IVD) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1547 Score = 214 bits (108), Expect = 2e-52 Identities = 282/340 (82%) Strand = Plus / Plus Query: 103 cccaaaaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaa 162 |||||||||||||||||||||||||||| |||||||| || ||| |||| || | |||| Sbjct: 610 cccaaaaggaaaagtatttgccaaagcttatcagtggagagcatgttggtgctcttgcaa 669 Query: 163 tgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtag 222 |||||||||| || |||| || |||||||| | ||||| ||||| |||||||| |||| Sbjct: 670 tgagtgaacctaatgctggttcagatgttgttggcatgaaatgcaaggctgagaaggtag 729 Query: 223 atggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcaga 282 |||| || ||| | | ||||| || |||||||||||||| ||||||||||||||| | | Sbjct: 730 atggtggttatatactaaatggcaacaagatgtggtgcactaatggtccatctgctgaaa 789 Query: 283 cattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattca 342 || ||||||||||||||||||| |||| || || || || |||||||| || || |||| Sbjct: 790 cactggttgtttacgcgaaaactgatacaaaagcaggttccaaaggaatcacggctttca 849 Query: 343 taattgagaaggggatgccagggttcagtactgcacagaagttggacaaacttggcatgc 402 | || ||||| || ||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct: 850 tcatagagaaaggaatgaccggattcagtactgctcagaaattggacaaactaggaatgc 909 Query: 403 gaggaagtgacacatgtgagcttgtctttgagaactgctt 442 | ||||| || || ||||||||||| |||||||| ||||| Sbjct: 910 ggggaagcgatacgtgtgagcttgtttttgagaattgctt 949
>gb|AY087286.1| Arabidopsis thaliana clone 33674 mRNA, complete sequence Length = 1514 Score = 214 bits (108), Expect = 2e-52 Identities = 282/340 (82%) Strand = Plus / Plus Query: 103 cccaaaaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaa 162 |||||||||||||||||||||||||||| |||||||| || ||| |||| || | |||| Sbjct: 524 cccaaaaggaaaagtatttgccaaagcttatcagtggagagcatgttggtgctcttgcaa 583 Query: 163 tgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtag 222 |||||||||| || |||| || |||||||| | ||||| ||||| |||||||| |||| Sbjct: 584 tgagtgaacctaatgctggttcagatgttgttggcatgaaatgcaaggctgagaaggtag 643 Query: 223 atggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcaga 282 |||| || ||| | | ||||| || |||||||||||||| ||||||||||||||| | | Sbjct: 644 atggtggttatatactaaatggcaacaagatgtggtgcactaatggtccatctgctgaaa 703 Query: 283 cattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattca 342 || ||||||||||||||||||| |||| || || || || |||||||| || || |||| Sbjct: 704 cactggttgtttacgcgaaaactgatacaaaagcaggttccaaaggaatcacggctttca 763 Query: 343 taattgagaaggggatgccagggttcagtactgcacagaagttggacaaacttggcatgc 402 | || ||||| || ||| | || ||||||||||| ||||| ||||||||||| || |||| Sbjct: 764 tcatagagaaaggaatgaccggattcagtactgctcagaaattggacaaactaggaatgc 823 Query: 403 gaggaagtgacacatgtgagcttgtctttgagaactgctt 442 | ||||| || || ||||||||||| |||||||| ||||| Sbjct: 824 ggggaagcgatacgtgtgagcttgtttttgagaattgctt 863
>emb|AJ010945.1|PSA010945 Pisum sativum mRNA for Isovaleryl-CoA dehydrogenase/auxin binding protein (abp44/ivdh gene) Length = 1559 Score = 206 bits (104), Expect = 5e-50 Identities = 284/344 (82%) Strand = Plus / Plus Query: 156 ttggcaatgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaaagctgag 215 ||||| ||||||||||| || ||||| |||||||||||| | ||||| ||||| ||||| Sbjct: 552 ttggcgatgagtgaacccaattctgggtctgatgttgtcggcatgaaatgcaaggctgat 611 Query: 216 aaagtagatggcggctatgtcattaatgggaataagatgtggtgcacaaatggtccatct 275 ||||| || || ||||| ||||||| || ||||||||||| || ||||| | | Sbjct: 612 cgtgtagacggaggatatgtacttaatggtaacaagatgtggtgtactaatgggaccgtt 671 Query: 276 gctcagacattggttgtttacgcgaaaacagatataactgctggatcgaaaggaataact 335 ||||| ||||| ||||| || || |||||||| ||||| || || || |||||||| ||| Sbjct: 672 gctcaaacattagttgtctatgcaaaaacagacataacagcagggtcaaaaggaatcact 731 Query: 336 gcattcataattgagaaggggatgccagggttcagtactgcacagaagttggacaaactt 395 |||||||| || |||||||| ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 732 gcattcatcatcgagaagggaatgcctggattcagtactgcgcagaaattggataaacta 791 Query: 396 ggcatgcgaggaagtgacacatgtgagcttgtctttgagaactgctttgtgcctcgagag 455 || |||||||||||||| ||||||||||||||||| ||||| |||||||| || || Sbjct: 792 gggatgcgaggaagtgatacatgtgagcttgtcttcgagaattgctttgttccagacgaa 851 Query: 456 aatgttcttggtgaagaaggaaaaggtgtttatgtcatgatgtc 499 ||||||||||| ||||||||||||| || |||||||||||||| Sbjct: 852 aatgttcttgggaaagaaggaaaaggagtctatgtcatgatgtc 895
>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11, complete sequence Length = 124104 Score = 159 bits (80), Expect = 1e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 178 ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 237 |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 73924 ctggttctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtca 73865 Query: 238 ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggt 289 |||| |||||||||||||||||||| || || ||||||||||||||| |||| Sbjct: 73864 ttaacgggaataagatgtggtgcaccaacgggccatctgctcagacactggt 73813 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 287 ggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataat 346 |||||| || || |||||||||||| |||||||||| ||||||||||| || |||||||| Sbjct: 73556 ggttgtgtatgcaaaaacagatatagctgctggatcaaaaggaataaccgcgttcataat 73497 Query: 347 tgagaaggggatgccagggt 366 ||||||||||||||| |||| Sbjct: 73496 tgagaaggggatgcccgggt 73477 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 364 ggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacac 415 |||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 73258 ggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacac 73207 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 479 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctg 531 ||||||||||||||||||||| || |||||||| ||||||||||| ||||||| Sbjct: 72869 aggtgtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctg 72817 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 10 aggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgt 69 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 74424 aggagatcagcagggcgtccggctcggtcggcctgtcttacggcgctcactccaacctct 74365 Query: 70 gcatcaaccagctggt 85 |||| ||||||||||| Sbjct: 74364 gcattaaccagctggt 74349 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 125 aaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaact 177 |||||||||||||||||| ||| | ||||||||||| ||||| ||||| |||| Sbjct: 74069 aaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaact 74017 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 ggtccgtcatggcagccctacccaaaag 110 |||||| |||||||||||| |||||||| Sbjct: 74235 ggtccggcatggcagccctgcccaaaag 74208
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 159 bits (80), Expect = 1e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 178 ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 237 |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 1412262 ctggttctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtca 1412203 Query: 238 ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggt 289 |||| |||||||||||||||||||| || || ||||||||||||||| |||| Sbjct: 1412202 ttaacgggaataagatgtggtgcaccaacgggccatctgctcagacactggt 1412151 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 287 ggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataat 346 |||||| || || |||||||||||| |||||||||| ||||||||||| || |||||||| Sbjct: 1411894 ggttgtgtatgcaaaaacagatatagctgctggatcaaaaggaataaccgcgttcataat 1411835 Query: 347 tgagaaggggatgccagggt 366 ||||||||||||||| |||| Sbjct: 1411834 tgagaaggggatgcccgggt 1411815 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 364 ggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacac 415 |||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 1411596 ggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacac 1411545 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 479 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctg 531 ||||||||||||||||||||| || |||||||| ||||||||||| ||||||| Sbjct: 1411207 aggtgtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctg 1411155 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 10 aggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgt 69 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 1412762 aggagatcagcagggcgtccggctcggtcggcctgtcttacggcgctcactccaacctct 1412703 Query: 70 gcatcaaccagctggt 85 |||| ||||||||||| Sbjct: 1412702 gcattaaccagctggt 1412687 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 125 aaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaact 177 |||||||||||||||||| ||| | ||||||||||| ||||| ||||| |||| Sbjct: 1412407 aaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaact 1412355 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 ggtccgtcatggcagccctacccaaaag 110 |||||| |||||||||||| |||||||| Sbjct: 1412573 ggtccggcatggcagccctgcccaaaag 1412546
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 159 bits (80), Expect = 1e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 178 ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 237 |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct: 6342 ctggttctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggtggttatgtca 6283 Query: 238 ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggt 289 |||| |||||||||||||||||||| || || ||||||||||||||| |||| Sbjct: 6282 ttaacgggaataagatgtggtgcaccaacgggccatctgctcagacactggt 6231 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 287 ggttgtttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataat 346 |||||| || || |||||||||||| |||||||||| ||||||||||| || |||||||| Sbjct: 5974 ggttgtgtatgcaaaaacagatatagctgctggatcaaaaggaataaccgcgttcataat 5915 Query: 347 tgagaaggggatgccagggt 366 ||||||||||||||| |||| Sbjct: 5914 tgagaaggggatgcccgggt 5895 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Minus Query: 364 ggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtgacac 415 |||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 5676 ggttcagtactgcacagaagttggacaagcttggcatgagaggaagtgacac 5625 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 479 aggtgtttatgtcatgatgtctggtcttgatctggaaagacttgtattagctg 531 ||||||||||||||||||||| || |||||||| ||||||||||| ||||||| Sbjct: 5287 aggtgtttatgtcatgatgtcagggcttgatctagaaagacttgtgttagctg 5235 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 10 aggagataagcagggcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgt 69 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 6842 aggagatcagcagggcgtccggctcggtcggcctgtcttacggcgctcactccaacctct 6783 Query: 70 gcatcaaccagctggt 85 |||| ||||||||||| Sbjct: 6782 gcattaaccagctggt 6767 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 125 aaagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaact 177 |||||||||||||||||| ||| | ||||||||||| ||||| ||||| |||| Sbjct: 6487 aaagctaatcagtggggagcatgtgggggcattggcgatgagcgaacccaact 6435 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 83 ggtccgtcatggcagccctacccaaaag 110 |||||| |||||||||||| |||||||| Sbjct: 6653 ggtccggcatggcagccctgcccaaaag 6626
>emb|AJ278987.1|STU278987 Solanum tuberosum mRNA for isovaleryl-CoA dehydrogenase (ivd1 gene) Length = 1406 Score = 125 bits (63), Expect = 2e-25 Identities = 300/379 (79%) Strand = Plus / Plus Query: 112 aaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaatgagtgaac 171 |||| ||||| |||||||| || |||||||| || |||||||| | || |||||||||| Sbjct: 458 aaaaatatttaccaaagcttataagtggggatcacattggggctctagccatgagtgaac 517 Query: 172 caaactctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggct 231 |||| |||| || |||||||| || |||||||| ||| || || ||||| |||| Sbjct: 518 caaatgctgggtcagatgttgttagcatgaagtgtcgagccgatcgtgtcgatggtggct 577 Query: 232 atgtcattaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttg 291 |||| | ||||| ||||| ||||||||||| |||||||| ||| | || ||| ||| Sbjct: 578 atgttttaaatggaaataaaatgtggtgcaccaatggtcctgtcgctaatactttgattg 637 Query: 292 tttacgcgaaaacagatataactgctggatcgaaaggaataactgcattcataattgaga 351 |||| || ||||| |||| |||||||| || |||||||| || ||||| || || || | Sbjct: 638 tttatgcaaaaacggatacgactgctggttcaaaaggaattacagcatttatcatcgaaa 697 Query: 352 aggggatgccagggttcagtactgcacagaagttggacaaacttggcatgcgaggaagtg 411 | | |||||||| ||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct: 698 aagaaatgccaggattctcaactgcacagaaattggacaaacttgggatgcgaggaagcg 757 Query: 412 acacatgtgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaag 471 | || ||||| ||||| || ||||| |||||||| ||| ||| |||||||| || | | Sbjct: 758 atacgtgtgaacttgtattcgagaattgctttgttcctaaagaaaatgttctagggcagg 817 Query: 472 aaggaaaaggtgtttatgt 490 |||||||||| || ||||| Sbjct: 818 aaggaaaaggagtgtatgt 836
>gb|BT016182.1| Zea mays clone Contig15 mRNA sequence Length = 828 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 152 ggcattggcaatgagtgaaccaaactctggctctgatgttgtcagtatgaagtgcaa 208 |||| |||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 772 ggcactggcgatgagtgaacccaactctggctctgatgtcgtcagcatgaagtgcaa 828
>emb|AJ010946.1|PSA010946 Pisum sativum abp44/ivdh gene for Isovaleryl-CoA dehydrogenase/auxin binding protein Length = 3572 Score = 71.9 bits (36), Expect = 2e-09 Identities = 147/184 (79%) Strand = Plus / Plus Query: 178 ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 237 |||| |||||||||||| | ||||| ||||| ||||| ||||| || || ||||| Sbjct: 2041 ctgggtctgatgttgtcggcatgaaatgcaaggctgatcgtgtagacggaggatatgtac 2100 Query: 238 ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacattggttgtttacg 297 ||||||| || ||||||||||| || ||||| | |||||| ||||| ||||| || | Sbjct: 2101 ttaatggtaacaagatgtggtgtactaatgggaccgttgctcaaacattagttgtctatg 2160 Query: 298 cgaaaacagatataactgctggatcgaaaggaataactgcattcataattgagaagggga 357 | |||||||| ||||| || || || |||||||| ||||||||||| || |||||||| | Sbjct: 2161 caaaaacagacataacagcagggtcaaaaggaatcactgcattcatcatcgagaagggaa 2220 Query: 358 tgcc 361 |||| Sbjct: 2221 tgcc 2224 Score = 54.0 bits (27), Expect = 5e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 416 atgtgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaagg 475 ||||||||||||||| ||||| |||||||| || || ||||||||||| ||||||| Sbjct: 2489 atgtgagcttgtcttcgagaattgctttgttccagacgaaaatgttcttgggaaagaagg 2548 Query: 476 aaaaggt 482 ||||||| Sbjct: 2549 aaaaggt 2555 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 366 ttcagtactgcacagaagttggacaaacttggcatgcgaggaagtga 412 ||||||||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 2344 ttcagtactgcgcagaaattggataaactagggatgcgaggaagtga 2390
>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11 Length = 91274 Score = 65.9 bits (33), Expect = 1e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 198 atgaagtgcaaagctgagaaagtagatggcggctatgtcattaatgggaataagatgtgg 257 ||||| ||||| |||||||| |||||||| || ||| | | ||||| || ||||||||| Sbjct: 54043 atgaaatgcaaggctgagaaggtagatggtggttatatactaaatggcaacaagatgtgg 53984 Query: 258 tgcacaaatggtccatctgct 278 ||||| ||||||||||||||| Sbjct: 53983 tgcactaatggtccatctgct 53963 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 103 cccaaaaggaaaagtatttgccaaag 128 |||||||||||||||||||||||||| Sbjct: 54481 cccaaaaggaaaagtatttgccaaag 54456 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 366 ttcagtactgcacagaagttggacaaacttggcatgcgaggaag 409 ||||||||||| ||||| ||||||||||| || ||||| ||||| Sbjct: 53664 ttcagtactgctcagaaattggacaaactaggaatgcggggaag 53621
>gb|BC106210.1| Xenopus laevis cDNA clone IMAGE:7980776, partial cds Length = 1734 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 126 aagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctct 185 ||||| ||||||||||| || ||||| || |||| |||||||| |||||||| |||||| Sbjct: 440 aagctgatcagtggggagcacattggagccctggctatgagtgagccaaactccggctct 499 Query: 186 gatgt 190 ||||| Sbjct: 500 gatgt 504 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 348 gagaaggggatgccagggttcagtactgcacagaagttgga 388 |||||||| | |||||| ||||| |||||||||||| |||| Sbjct: 665 gagaagggaacgccaggattcagcactgcacagaagctgga 705
>gb|BC094479.1| Xenopus laevis cDNA clone IMAGE:7020557, partial cds Length = 1729 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 126 aagctaatcagtggggaccatattggggcattggcaatgagtgaaccaaactctggctct 185 ||||| ||||||||||| || ||||| || |||| |||||||| |||||||| |||||| Sbjct: 440 aagctgatcagtggggagcacattggagccctggctatgagtgagccaaactccggctct 499 Query: 186 gatgt 190 ||||| Sbjct: 500 gatgt 504 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 348 gagaaggggatgccagggttcagtactgcacagaagttgga 388 |||||||| | |||||| ||||| |||||||||||| |||| Sbjct: 665 gagaagggaacgccaggattcagcactgcacagaagctgga 705
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 33 tcggtcggcctttcctacggtgcgcactcaaatctgtgcatcaaccag 80 ||||||||||| |||||||| ||||| || ||||| |||||||||||| Sbjct: 4488028 tcggtcggcctgtcctacggcgcgcattccaatctctgcatcaaccag 4487981
>gb|AC152176.5| Medicago truncatula clone mth2-65c4, complete sequence Length = 161536 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 366 ttcagtactgcacagaagttggacaaacttggcatgcgaggaagtga 412 ||||||||||| ||||| ||||| ||||| || |||||||||||||| Sbjct: 14415 ttcagtactgcccagaaattggataaactagggatgcgaggaagtga 14369 Score = 50.1 bits (25), Expect = 0.008 Identities = 88/109 (80%) Strand = Plus / Minus Query: 178 ctggctctgatgttgtcagtatgaagtgcaaagctgagaaagtagatggcggctatgtca 237 |||| |||||||||||||| ||||| || || ||||| ||||| || || ||||| Sbjct: 14995 ctggatctgatgttgtcagcatgaaatgtaaggctgatcgtgtagacgggggatatgtac 14936 Query: 238 ttaatgggaataagatgtggtgcacaaatggtccatctgctcagacatt 286 |||| ||||| ||||||||||| || ||||| ||| ||||||| ||||| Sbjct: 14935 ttaacgggaacaagatgtggtgtactaatgggccaactgctcaaacatt 14887 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 486 tatgtcatgatgtctggtcttgatctggaaagacttgtattagc 529 ||||||||||||||||| || ||| ||||||| ||||| ||||| Sbjct: 13574 tatgtcatgatgtctgggctggatttggaaaggcttgttttagc 13531 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 416 atgtgagcttgtctttgagaactgctttgtgcctcgagagaatgttcttggtgaagaagg 475 ||||||||| ||||||||||| |||||||| || || ||||||||||| ||||||| Sbjct: 14277 atgtgagctagtctttgagaattgctttgttccagaggaaaatgttcttgggaaagaagg 14218 Query: 476 aaaaggt 482 |||||| Sbjct: 14217 gaaaggt 14211 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ttggcaatgagtgaaccaaa 175 |||||||||||||||||||| Sbjct: 15101 ttggcaatgagtgaaccaaa 15082
>emb|BX014589.1|CNS08JF5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA21DH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 438 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 24 gcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgtgcatcaa 76 |||||||| ||||||| ||| ||||||||||| ||||| || |||||| |||| Sbjct: 173 gcgtccggctcggtcgccctgtcctacggtgcccactcgaacctgtgcgtcaa 225
>ref|XM_308965.2| Anopheles gambiae str. PEST ENSANGP00000020214 (ENSANGG00000017725), partial mRNA Length = 1232 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 24 gcgtccgggtcggtcggcctttcctacggtgcgcactcaaatctgtgcatcaa 76 |||||||| ||||||| ||| ||||||||||| ||||| || |||||| |||| Sbjct: 672 gcgtccggctcggtcgccctgtcctacggtgcccactcgaacctgtgcgtcaa 724
>emb|CT030360.1| Xenopus tropicalis finished cDNA, clone TGas106c19 Length = 1862 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gagaaggggatgccagggttcagtactgcaca 379 ||||||||||||||||||||||| || ||||| Sbjct: 686 gagaaggggatgccagggttcagcaccgcaca 717
>emb|BX572598.1| Rhodopseudomonas palustris CGA009 complete genome; segment 6/16 Length = 346879 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Plus Query: 33 tcggtcggcctttcctacggtgcgcactcaaatctgtgcatcaa 76 ||||||||||| |||||||| |||||||| || || |||||||| Sbjct: 49487 tcggtcggcctgtcctacggcgcgcactccaacctctgcatcaa 49530
>ref|NM_001011380.1| Xenopus tropicalis hypothetical LOC496848 (LOC496848), mRNA Length = 1892 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gagaaggggatgccagggttcagtactgcaca 379 ||||||||||||||||||||||| || ||||| Sbjct: 698 gagaaggggatgccagggttcagcaccgcaca 729
>gb|BC088561.1| Xenopus tropicalis hypothetical LOC496848, mRNA (cDNA clone MGC:97746 IMAGE:6987702), complete cds Length = 1892 Score = 48.1 bits (24), Expect = 0.030 Identities = 30/32 (93%) Strand = Plus / Plus Query: 348 gagaaggggatgccagggttcagtactgcaca 379 ||||||||||||||||||||||| || ||||| Sbjct: 698 gagaaggggatgccagggttcagcaccgcaca 729
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 45 tcctacggtgcgcactcaaatctgtgcatcaaccagctg 83 |||||||| |||||||| || |||||| ||||||||||| Sbjct: 2699 tcctacggcgcgcactccaacctgtgcctcaaccagctg 2661
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 45 tcctacggtgcgcactcaaatctgtgcatcaaccagctg 83 |||||||| |||||||| || |||||| ||||||||||| Sbjct: 312856 tcctacggcgcgcactccaacctgtgcctcaaccagctg 312818
>ref|XM_420942.1| PREDICTED: Gallus gallus similar to Isovaleryl-CoA dehydrogenase, mitochondrial precursor (IVD) (LOC423011), mRNA Length = 2788 Score = 44.1 bits (22), Expect = 0.47 Identities = 115/146 (78%) Strand = Plus / Plus Query: 48 tacggtgcgcactcaaatctgtgcatcaaccagctggtccgtcatggcagccctacccaa 107 ||||| || |||||||| || || |||||||||||||| || ||||||| |||| Sbjct: 373 tacggagcccactcaaacctttgtatcaaccagctggtgcggaatggcagtgaagcccag 432 Query: 108 aaggaaaagtatttgccaaagctaatcagtggggaccatattggggcattggcaatgagt 167 || || ||||| ||||| ||||| || |||||||| || ||||| || || |||||||| Sbjct: 433 aaagagaagtacttgcccaagctcattagtggggagcacattggagccttagcaatgagc 492 Query: 168 gaaccaaactctggctctgatgttgt 193 || || || |||| ||||||||||| Sbjct: 493 gagcccaatgctgggtctgatgttgt 518
>gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, complete sequence Length = 131620 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 486 tatgtcatgatgtctggtcttg 507 |||||||||||||||||||||| Sbjct: 55253 tatgtcatgatgtctggtcttg 55274
>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence Length = 214625 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 405 ggaagtgacacatgtgagcttg 426 |||||||||||||||||||||| Sbjct: 63821 ggaagtgacacatgtgagcttg 63800
>gb|AC165952.4| Mus musculus BAC clone RP23-460G24 from chromosome 14, complete sequence Length = 183416 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 atgaagtgcaaagctgagaaa 218 ||||||||||||||||||||| Sbjct: 49420 atgaagtgcaaagctgagaaa 49400
>ref|XM_641986.1| Dictyostelium discoideum hypothetical protein (DDB0189324), partial mRNA Length = 6837 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 ttggcaatgagtgaaccaaactctg 180 ||||||||| ||||||||||||||| Sbjct: 3700 ttggcaatgcgtgaaccaaactctg 3724
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 gatgccagggttcagtactgc 376 ||||||||||||||||||||| Sbjct: 2628536 gatgccagggttcagtactgc 2628516
>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence Length = 168197 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 aagtgacacatgtgagcttgt 427 ||||||||||||||||||||| Sbjct: 158407 aagtgacacatgtgagcttgt 158427
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Plus Query: 32 gtcggtcggcctttcctacggtgcgcactcaaatctgtgcatcaaccag 80 |||||||||||| |||||||| ||||| || || |||||| | |||||| Sbjct: 2749249 gtcggtcggcctgtcctacggcgcgcattcgaacctgtgcgtgaaccag 2749297
>dbj|AB018156.1| Candida versatilis gene for 18S rRNA, partial sequence Length = 1758 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 acagaagttggacaaacttgg 397 ||||||||||||||||||||| Sbjct: 1685 acagaagttggacaaacttgg 1705
>gb|AC132468.4| Mus musculus BAC clone RP23-78D19 from 14, complete sequence Length = 238544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 atgaagtgcaaagctgagaaa 218 ||||||||||||||||||||| Sbjct: 142679 atgaagtgcaaagctgagaaa 142699
>gb|AC134588.5| Mus musculus BAC clone RP23-314N18 from 14, complete sequence Length = 178957 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 atgaagtgcaaagctgagaaa 218 ||||||||||||||||||||| Sbjct: 116684 atgaagtgcaaagctgagaaa 116704 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 atgaagtgcaaagctgagaaa 218 ||||||||||||||||||||| Sbjct: 35320 atgaagtgcaaagctgagaaa 35340
>gb|AC131670.5| Mus musculus BAC clone RP23-307I19 from 5, complete sequence Length = 197080 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 aagtgacacatgtgagcttgt 427 ||||||||||||||||||||| Sbjct: 26869 aagtgacacatgtgagcttgt 26889
>ref|NM_128998.3| Arabidopsis thaliana unknown protein AT2G34460 mRNA, complete cds Length = 1096 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 100 tgttcttggtgaagaaggaa 81
>ref|XM_636412.1| Dictyostelium discoideum isovaleryl-CoA dehydrogenase, mitochondrial (DDB0230189), partial mRNA Length = 1248 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 167 tgaaccaaactctggctctgatgttgtcagtatgaa 202 ||||||||| |||| ||||||||||| |||||||| Sbjct: 477 tgaaccaaatgctggttctgatgttgttagtatgaa 512
>ref|NM_001031511.1| Gallus gallus phosphofructokinase, platelet (PFKP), mRNA Length = 3354 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaaggaaaagtatttgccaa 126 |||||||||||||||||||| Sbjct: 2691 aaaggaaaagtatttgccaa 2710
>gb|BC077756.1| Xenopus laevis MGC79063 protein, mRNA (cDNA clone MGC:79063 IMAGE:4956939), complete cds Length = 3081 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tgaagaaggaaaaggtgttt 486 |||||||||||||||||||| Sbjct: 2100 tgaagaaggaaaaggtgttt 2119
>gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, complete sequence Length = 172863 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaactctggctctgatgttg 192 |||||||||||||||||||| Sbjct: 4892 aaactctggctctgatgttg 4911
>gb|AC145433.2| Pan troglodytes BAC clone RP43-43I4 from 7, complete sequence Length = 179409 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 ggtgaagaaggaaaaggtgt 484 |||||||||||||||||||| Sbjct: 121578 ggtgaagaaggaaaaggtgt 121597
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaactctggctctgatgttg 192 |||||||||||||||||||| Sbjct: 120353 aaactctggctctgatgttg 120372
>gb|BT000884.1| Arabidopsis thaliana clone C105360 unknown protein (At2g34460) mRNA, complete cds Length = 874 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 73 tgttcttggtgaagaaggaa 54
>gb|AC142317.1| Pan troglodytes BAC clone RP43-52L16 from 7, complete sequence Length = 147345 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 ggtgaagaaggaaaaggtgt 484 |||||||||||||||||||| Sbjct: 64229 ggtgaagaaggaaaaggtgt 64210
>emb|AL512648.21| Human DNA sequence from clone RP11-465C24 on chromosome 13, complete sequence Length = 61798 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aggtgtttatgtcatgatgt 498 |||||||||||||||||||| Sbjct: 29058 aggtgtttatgtcatgatgt 29077
>gb|AY034977.1| Arabidopsis thaliana unknown protein (At2g34460) mRNA, partial cds Length = 934 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 37 tgttcttggtgaagaaggaa 18
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 7.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 145 atattggggcattggcaatgagtgaaccaaactctggctctgatgttgtcagtatg 200 ||||||| || |||||||||||||| | ||||| || || ||||| ||||||||| Sbjct: 2001195 atattggtgctttggcaatgagtgagtccaactcagggtccgatgtagtcagtatg 2001250
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 7.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 145 atattggggcattggcaatgagtgaaccaaactctggctctgatgttgtcagtatg 200 ||||||| || |||||||||||||| | ||||| || || ||||| ||||||||| Sbjct: 2018630 atattggtgctttggcaatgagtgagtccaactcagggtccgatgtagtcagtatg 2018685
>emb|AJ721040.1| Gallus gallus mRNA for hypothetical protein, clone 33d2 Length = 3354 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aaaggaaaagtatttgccaa 126 |||||||||||||||||||| Sbjct: 2691 aaaggaaaagtatttgccaa 2710
>gb|AC010019.5| Drosophila melanogaster 3L BAC RP98-6F6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 195148 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 48 tacggtgcgcactcaaatctgtgcatcaaccagctg 83 ||||| || ||||| |||||||||||||| |||||| Sbjct: 112015 tacggagcacactccaatctgtgcatcaatcagctg 112050
>gb|AC181983.2| Gallus gallus BAC clone CH261-63A17 from chromosome ul, complete sequence Length = 161905 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 tatgaagtgcaaagctgagaaagt 220 ||||| |||||||||||||||||| Sbjct: 12116 tatgatgtgcaaagctgagaaagt 12093
>ref|NM_139982.3| Drosophila melanogaster CG6638-RA (CG6638), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 48 tacggtgcgcactcaaatctgtgcatcaaccagctg 83 ||||| || ||||| |||||||||||||| |||||| Sbjct: 445 tacggagcacactccaatctgtgcatcaatcagctg 480
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 100194 tgttcttggtgaagaaggaa 100175
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 74008 tgttcttggtgaagaaggaa 74027
>gb|AY089640.1| Drosophila melanogaster RE62833 full insert cDNA Length = 1527 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 48 tacggtgcgcactcaaatctgtgcatcaaccagctg 83 ||||| || ||||| |||||||||||||| |||||| Sbjct: 445 tacggagcacactccaatctgtgcatcaatcagctg 480
>gb|DQ244011.1| Uncultured fungus clone PFA12AU2004 18S ribosomal RNA gene, partial sequence Length = 1782 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 agaagttggacaaacttggc 398 |||||||||||||||||||| Sbjct: 1712 agaagttggacaaacttggc 1731
>emb|AJ628768.1| Bacteriophage S-RSM2 ORF1, omp1 gene, psbA gene, psbD gene and tal gene Length = 4758 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 agagaatgttcttggtgaagaagg 475 ||||||||||||||||| |||||| Sbjct: 3588 agagaatgttcttggtgtagaagg 3565
>gb|AY056425.1| Arabidopsis thaliana At2g34460/T31E10.20 mRNA, complete cds Length = 893 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 52 tgttcttggtgaagaaggaa 33
>gb|AC008449.6| Homo sapiens chromosome 5 clone CTC-341A9, complete sequence Length = 124405 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 tggcaatgagtgaaccaaactctg 180 |||||||||| ||||||||||||| Sbjct: 69788 tggcaatgagagaaccaaactctg 69765
>gb|AF039047.3| Caenorhabditis elegans cosmid K11D12, complete sequence Length = 45675 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ttcttggtgaagaaggaaaa 479 |||||||||||||||||||| Sbjct: 1948 ttcttggtgaagaaggaaaa 1967
>gb|AC151989.4| Mus musculus BAC clone RP23-298C3 from chromosome 7, complete sequence Length = 217239 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 aatgggaataagatgtggtg 259 |||||||||||||||||||| Sbjct: 15040 aatgggaataagatgtggtg 15059
>ref|NM_071946.4| Caenorhabditis elegans Serpentine Receptor, class R family member (srr-4) (srr-4) mRNA, complete cds Length = 1317 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 ttcttggtgaagaaggaaaa 479 |||||||||||||||||||| Sbjct: 255 ttcttggtgaagaaggaaaa 274
>dbj|AK032454.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430549L24 product:RNA binding motif protein 4, full insert sequence Length = 2966 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aaactctggctctgatgttg 192 |||||||||||||||||||| Sbjct: 2657 aaactctggctctgatgttg 2676
>emb|BX819331.1|CNS0AA83 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB69ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 tgttcttggtgaagaaggaa 477 |||||||||||||||||||| Sbjct: 100 tgttcttggtgaagaaggaa 81
>gb|BC045100.1| Xenopus laevis, clone IMAGE:5542112, mRNA Length = 3061 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 tgaagaaggaaaaggtgttt 486 |||||||||||||||||||| Sbjct: 2079 tgaagaaggaaaaggtgttt 2098
>gb|AE003555.3| Drosophila melanogaster chromosome 3L, section 30 of 83 of the complete sequence Length = 283781 Score = 40.1 bits (20), Expect = 7.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 48 tacggtgcgcactcaaatctgtgcatcaaccagctg 83 ||||| || ||||| |||||||||||||| |||||| Sbjct: 242075 tacggagcacactccaatctgtgcatcaatcagctg 242040
>dbj|AB032202.1| Mus musculus Prss19 gene for neuropsin, complete cds Length = 7401 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 aatgggaataagatgtggtg 259 |||||||||||||||||||| Sbjct: 6689 aatgggaataagatgtggtg 6670 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,786,898 Number of Sequences: 3902068 Number of extensions: 4786898 Number of successful extensions: 92067 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91800 Number of HSP's gapped (non-prelim): 258 length of query: 537 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 514 effective length of database: 17,143,297,704 effective search space: 8811655019856 effective search space used: 8811655019856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
