ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags29l11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GP107_MOUSE (Q8BUV8) Protein GPR107 precursor 98 2e-20
2GP108_HUMAN (Q9NPR9) Protein GPR108 precursor 92 1e-18
3GP108_MOUSE (Q91WD0) Protein GPR108 precursor (Lung seven transm... 92 2e-18
4GP108_RAT (Q6P6V6) Protein GPR108 precursor 91 3e-18
5GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transm... 86 1e-16
6Y6610_BACAN (Q9RMV5) Hypothetical protein pXO2-80/BXB0110/GBAA_p... 33 0.82
7TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member ... 30 5.3
8TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member ... 30 5.3

>GP107_MOUSE (Q8BUV8) Protein GPR107 precursor|
          Length = 551

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = +3

Query: 15  NLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTRVVVYALVTITSYRYLWTSVVAGE 194
           +L+EA+ +DGKAA+NL KL LFR YYV+++CYIYFTR++ + L     +++ W   +  E
Sbjct: 424 HLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFAVPFQWKWLYQLLDE 483

Query: 195 IATLAFYVFTGYRFRPEVHNPY 260
            ATL F+V TGY+FRP   NPY
Sbjct: 484 TATLVFFVLTGYKFRPASDNPY 505



to top

>GP108_HUMAN (Q9NPR9) Protein GPR108 precursor|
          Length = 543

 Score = 92.4 bits (228), Expect = 1e-18
 Identities = 41/82 (50%), Positives = 59/82 (71%)
 Frame = +3

Query: 15  NLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTRVVVYALVTITSYRYLWTSVVAGE 194
           +L++A+ +DGK AVNL KL LFR YYV+VICY+YFTR++   L     +++ W   +  E
Sbjct: 423 HLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVE 482

Query: 195 IATLAFYVFTGYRFRPEVHNPY 260
            +TLAF+V TGY+F+P  +NPY
Sbjct: 483 GSTLAFFVLTGYKFQPTGNNPY 504



to top

>GP108_MOUSE (Q91WD0) Protein GPR108 precursor (Lung seven transmembrane|
           receptor 2)
          Length = 569

 Score = 91.7 bits (226), Expect = 2e-18
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 15  NLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTRVVVYALVTITSYRYLWTSVVAGE 194
           +L++A+ +DGK AVNL +L LFR YYV+VICYIYFTR++   L     +++ W   +  E
Sbjct: 449 HLQDASGTDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQVAVPFQWQWLYQLLVE 508

Query: 195 IATLAFYVFTGYRFRPEVHNPY 260
            +TLAF+V TGY+F+P   NPY
Sbjct: 509 SSTLAFFVLTGYKFQPAGDNPY 530



to top

>GP108_RAT (Q6P6V6) Protein GPR108 precursor|
          Length = 577

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 15  NLREAARSDGKAAVNLMKLTLFRQYYVVVICYIYFTRVVVYALVTITSYRYLWTSVVAGE 194
           +L++A+ +DGK A+NL KL LFR YYV+VICYIYFTR++   L     +++ W   +  E
Sbjct: 456 HLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVAVPFQWQWLYQLLVE 515

Query: 195 IATLAFYVFTGYRFRPEVHNPY 260
            +TLAF+V TGY+F+P   NPY
Sbjct: 516 SSTLAFFVLTGYKFQPAGDNPY 537



to top

>GP107_HUMAN (Q5VW38) Protein GPR107 precursor (Lung seven transmembrane|
           receptor 1)
          Length = 600

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +3

Query: 48  AAVNLMKLTLFRQYYVVVICYIYFTRVVVYALVTITSYRYLWTSVVAGEIATLAFYVFTG 227
           AA+NL KL LFR YYV+++CYIYFTR++ + L     +++ W   +  E ATL F+V TG
Sbjct: 484 AAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFVLTG 543

Query: 228 YRFRPEVHNPY 260
           Y+FRP   NPY
Sbjct: 544 YKFRPASDNPY 554



to top

>Y6610_BACAN (Q9RMV5) Hypothetical protein pXO2-80/BXB0110/GBAA_pXO2_0110|
          Length = 328

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 339 KFGGLFPASATQVLYCASTGKMLSQD 416
           ++ GL+P +   V+YC STGK L QD
Sbjct: 157 EYQGLYPINEDMVIYCESTGKPLQQD 182



to top

>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor|
           (SM-11044-binding protein) (EP70-P-iso)
          Length = 589

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 78  FRQYYVVVICYIYF--TRVVVYALVTITSYRYLWTSVVAGEIATLAFYVFTGYRF 236
           F    +V++C +    T V  Y L+    YR+ WTS ++     +  Y+++ Y +
Sbjct: 483 FMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYY 537



to top

>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor|
          Length = 587

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 78  FRQYYVVVICYIYF--TRVVVYALVTITSYRYLWTSVVAGEIATLAFYVFTGYRF 236
           F    +V++C +    T V  Y L+    YR+ WTS ++     +  Y+++ Y +
Sbjct: 481 FMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYY 535


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,147,261
Number of Sequences: 219361
Number of extensions: 1722939
Number of successful extensions: 3761
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3755
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top