>PTH2_HUMAN (Q9Y3E5) Peptidyl-tRNA hydrolase 2, mitochondrial precursor (EC|
           3.1.1.29) (PTH 2) (Bcl-2 inhibitor of transcription 1)
          Length = 179

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = +1

Query: 4   CSHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITID 183
           CSHA +  +K++Q+R P+ L++WE CGQ         EE ++ L   AK + L   +  D
Sbjct: 86  CSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQD 145

Query: 184 AGRTQIAPNSRTVMAI-LGPADMVDDVTGGLKL 279
           AGRTQIAP S+TV+ I  GPAD++D VTG LKL
Sbjct: 146 AGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178

>PTH2_MOUSE (Q8R2Y8) Peptidyl-tRNA hydrolase 2, mitochondrial precursor (EC|
           3.1.1.29) (PTH 2)
          Length = 181

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
 Frame = +1

Query: 4   CSHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITID 183
           CSHA +  +K+ Q+R+P+ L+ WE CGQ         E+ ++ L   AK++ L   +  D
Sbjct: 88  CSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDTLIQLLTHAKTLGLTVSLIQD 147

Query: 184 AGRTQIAPNSRTVMAI-LGPADMVDDVTGGLKL 279
           AGRTQI P SRTV+ I  GP +++D+VTG LKL
Sbjct: 148 AGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180

>PTH2_DROME (O97067) Probable peptidyl-tRNA hydrolase 2 (EC 3.1.1.29) (PTH 2)|
          Length = 186

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
 Frame = +1

Query: 4   CSHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITID 183
           C H  +G +++   R P+ LR WE CG        ESE +++ ++  A+   L T +  D
Sbjct: 93  CGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRD 152

Query: 184 AGRTQIAPNSRTVMAILGPADM--VDDVTGGLKLL 282
           AGRTQI  NS+TV+A+ GPA    +D VTG LKLL
Sbjct: 153 AGRTQIEANSKTVLAV-GPAAAADIDRVTGHLKLL 186

>PTH2_SCHPO (O13830) Probable peptidyl-tRNA hydrolase 2 (EC 3.1.1.29) (PTH 2)|
          Length = 205

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
 Frame = +1

Query: 4   CSHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITID 183
           C+HA L  +K      P  +R WE  GQ       ++EE + +LQ +A S+ L   +  D
Sbjct: 112 CAHAALACYKIASAVDPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHD 171

Query: 184 AGRTQIAPNSRTVMAI-LGPADMVDDVTGGLKL 279
           AGRTQIA  S TV+ I  GP  ++++VTG LKL
Sbjct: 172 AGRTQIASGSATVLGIGPGPVSVINEVTGSLKL 204

>PTH2_CAEEL (O76387) Probable peptidyl-tRNA hydrolase 2 (EC 3.1.1.29) (PTH 2)|
          Length = 316

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = +1

Query: 10  HATLGLFKKLQ--QRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITID 183
           HATLG++++    +    ++  W R GQ       +S E ++ L   AK      ++  D
Sbjct: 224 HATLGVYRQAMNSENGQNAIAAWTRHGQVKIVVKGQSTEQLMDLCKVAKDAGCYYYLVQD 283

Query: 184 AGRTQIAPNSRTVMAILGPADMVDDVTGGLKLL 282
           AG TQI   SRTV+ I G  + VD VTGGLKLL
Sbjct: 284 AGYTQIPAGSRTVLGIFGTVEQVDSVTGGLKLL 316

>PTH_PYRKO (Q5JDB8) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 118

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
 Frame = +1

Query: 7   SHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDA 186
           +H  +    K Q+  P+  + W   GQ       E+ E++  L+  A+ + LPT +  DA
Sbjct: 26  AHGAVTAAIKAQKEKPEWFKAWFHEGQKKVVVKAENLEELFKLKAEAEKLGLPTALIKDA 85

Query: 187 GRTQIAPNSRTVMAI-LGPADMVDDVTGGLKLL 282
           G T+I P + TV+AI  GP ++VD VTG LKLL
Sbjct: 86  GLTEIPPGTVTVLAIGPGPEEVVDKVTGHLKLL 118

>PTH_METJA (Q60363) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 58.9 bits (141), Expect = 9e-09
 Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = +1

Query: 10  HATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAG 189
           HA +  F   +++ P+++  W R GQ        SE++++ +  +A+S  LP  I  DAG
Sbjct: 24  HAIIEAFLDAKRKNPRAVDEWLREGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAG 83

Query: 190 RTQIAPNSRTVMAILGPA--DMVDDVTGGLKLL 282
            TQ+ P + T +AI GP   + +D +TG LKLL
Sbjct: 84  HTQLEPGTLTAVAI-GPEKDEKIDKITGHLKLL 115

>PTH_PYRFU (Q8U0N0) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 119

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +1

Query: 70  WERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAI-LGPAD 246
           W R GQ       ++EE++  L+  A+ + LPT +  DAG T+I P + TV+AI  GP +
Sbjct: 48  WFREGQKKVVVKAQNEEELFKLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEE 107

Query: 247 MVDDVTGGLKLL 282
           +VD VTG LKLL
Sbjct: 108 VVDKVTGHLKLL 119

>PTH_PYRAB (Q9V108) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 121

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = +1

Query: 13  ATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGR 192
           A    FK  +++  +   +W   GQ       ES +++  L+  A+ +NLPT +  DAG 
Sbjct: 32  AVTAAFKAYKEKR-EWFEKWFHEGQKKVVVKVESLDELFKLKAEAEKLNLPTALIQDAGL 90

Query: 193 TQIAPNSRTVMAI-LGPADMVDDVTGGLKLL 282
           T+I P + TV+AI  GP++++D VTG LKLL
Sbjct: 91  TEIPPGTITVLAIGPGPSEIIDKVTGHLKLL 121

>PTH_PYRHO (O74017) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 121

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +1

Query: 70  WERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAILGPA-- 243
           W R GQ       ESEE++  L+  A+ + LP  +  DAG T+I P + TV+A+ GPA  
Sbjct: 50  WFREGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLTEIPPGTVTVLAV-GPAPE 108

Query: 244 DMVDDVTGGLKLL 282
           ++VD VTG LKLL
Sbjct: 109 EIVDKVTGNLKLL 121

>PTH_HALSA (P61414) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 112

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = +1

Query: 7   SHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDA 186
           +HA+L  ++    RA   +RRW+  GQ        SE ++      AK   LPT +  DA
Sbjct: 23  AHASLNAYEYTDDRA---VRRWKDEGQTKVVVKVGSERELYERSEEAKRAGLPTGLISDA 79

Query: 187 GRTQIAPNSRTVMAILGPAD--MVDDVTGGLKL 279
           GRTQ+ P + T +AI GPA    VD +TG L L
Sbjct: 80  GRTQLEPGTPTALAI-GPAPDADVDQITGDLSL 111

>PTH_PYRAE (Q8ZYM4) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 120

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = +1

Query: 55  KSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAIL 234
           K L +W   GQ       +    +  L  RAKS+ LPT + IDAG T++ P + T + + 
Sbjct: 43  KWLDQWLEEGQKKIVLTADDAAHLYQLHERAKSLGLPTAVVIDAGLTELPPGTPTAICV- 101

Query: 235 GPA--DMVDDVTGGLKL 279
           GPA  ++VD VTG LKL
Sbjct: 102 GPAPDELVDKVTGSLKL 118

>PTH_SULAC (Q877G5) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 120

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
 Frame = +1

Query: 7   SHATLGLFKKLQQRAPKS-----LRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTH 171
           +HA + L  ++ Q+  K+     L  W   GQ       ++ +++L    +A    LP  
Sbjct: 23  AHAAVSLVLEIVQKRSKAEWKEWLEMWINQGQPKIVLKVKNLDELLEKYNKALQSGLPAT 82

Query: 172 ITIDAGRTQIAPNSRTVMAI-LGPADMVDDVTGGLKLL 282
           I  DAG+TQI P + T   I  GP +M+D++TG LKLL
Sbjct: 83  IIQDAGKTQIEPGTITCAGIGPGPEEMIDNITGDLKLL 120

>PTH_HALMA (Q5V1D3) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 112

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = +1

Query: 7   SHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDA 186
           +HA+L  +   +   PK  + W+  GQ        SE ++  L   A+   LP  +  DA
Sbjct: 23  AHASLSAY---EDAGPKPRKAWKGAGQKKVVLKATSESELFELADVAEREGLPHAVVRDA 79

Query: 187 GRTQIAPNSRTVMAILGPA--DMVDDVTGGLKL 279
           G TQ+ P + T +A+ GPA  ++VD VTG L L
Sbjct: 80  GHTQLDPGTVTALAV-GPAEDELVDRVTGDLPL 111

>PTH_SULSO (Q980V1) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 120

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +1

Query: 61  LRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAILGP 240
           L  W   GQ        S ++++    +A++MNLP  I  DAG+TQ+ P + T + I GP
Sbjct: 46  LNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGI-GP 104

Query: 241 A--DMVDDVTGGLKLL 282
           A  ++VD +TG LKLL
Sbjct: 105 APENLVDSITGDLKLL 120

>PTH2_YEAST (P34222) Peptidyl-tRNA hydrolase 2 (EC 3.1.1.29) (PTH 2)|
          Length = 214

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
 Frame = +1

Query: 4   CSHATLGLFKKLQQRA------PKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLP 165
           C HA L  F+ +          P   +RW   GQ         +  M  L  +A S+ + 
Sbjct: 115 CCHAALSCFRHIATNPARASYNPIMTQRWLNAGQAKITLKCPDKFTMDELYAKAISLGVN 174

Query: 166 THITIDAGRTQIAPNSRTVMAILGPAD--MVDDVTGGLKL 279
             +  DAGRTQIA  S TV+  LGPA   ++D +TG LKL
Sbjct: 175 AAVIHDAGRTQIAAGSATVLG-LGPAPKAVLDQITGDLKL 213

>PTH_METTH (O27732) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 112

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = +1

Query: 10  HATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAG 189
           HA++G FK+ ++     +R+WE  G         S +++L +    K   +  ++  DAG
Sbjct: 24  HASIGSFKRTEE---DKIRKWELEGSKKVIVSVNSLDELLEIYRAVKEAGISNYLVRDAG 80

Query: 190 RTQIAPNSRTVMAILGPAD--MVDDVTGGLKLL 282
            TQI   + T + I GP D   +D +TG LKLL
Sbjct: 81  HTQIPAGTITCLGI-GPDDDEKIDKITGDLKLL 112

>PTH_METKA (Q8TV04) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 116

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
 Frame = +1

Query: 7   SHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDA 186
           +HA+LG F + ++     +  W R GQ       + +E++L L   AK   LP+ +  DA
Sbjct: 24  AHASLGAFLRAKESGAP-VEEWLREGQKKVVLKCKDKEELLELHELAKRRGLPSFLVRDA 82

Query: 187 GRTQIAPNSRTVMAILGP--ADMVDDVTGGLKLL 282
           G T++ P + T + I GP   + +D VTG L LL
Sbjct: 83  GLTELEPGTVTCLGI-GPEREEEIDRVTGDLPLL 115

>PTH_SULTO (Q976I0) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 121

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = +1

Query: 61  LRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAI-LG 237
           L +W   GQ        S +++     +A  +NLPT I  DAG+TQI P + T + I   
Sbjct: 47  LYKWLEEGQPKIVVKVPSLDELNKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPA 106

Query: 238 PADMVDDVTGGLKLL 282
           P ++VD +TG LKLL
Sbjct: 107 PVELVDKITGDLKLL 121

>PTH_METMA (Q8Q0M4) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
 Frame = +1

Query: 61  LRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAILGP 240
           L +W+  GQ        S +++  L+ +A+   LPT +  DAG T+I P + TV+ I GP
Sbjct: 41  LEKWKEGGQKKIVLKVPSIKELYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGI-GP 99

Query: 241 A--DMVDDVTGGLKLL 282
           A  +++D +T  LKL+
Sbjct: 100 AKEELIDKITKDLKLV 115

>PTH_AERPE (Q9YBD6) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 124

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +1

Query: 61  LRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAI-LG 237
           L  W   GQ       ES  ++  +  +A    LP     DAG+TQ+ P + T  A+   
Sbjct: 50  LEMWRLQGQAKVVLRVESLAELQEVYSKAVEEGLPASFVRDAGKTQLEPGTPTAAAVGPA 109

Query: 238 PADMVDDVTGGLKL 279
           P+ +VD +TGGLKL
Sbjct: 110 PSRLVDRITGGLKL 123

>PTH_NANEQ (P61235) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
 Frame = +1

Query: 7   SHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDA 186
           +HA+L    K+ +   +   RW R G         S E++L +  +A    +   I  DA
Sbjct: 23  AHASLDAALKVYRNNKELFDRWYREGAKKVVLKVNSLEELLDIAKKAMEKGIVVSIIRDA 82

Query: 187 GRTQIAPNSRTVMAILGP--ADMVDDVTGGLKL 279
           G+TQ++P +   +A LGP   + +D +TG LKL
Sbjct: 83  GKTQVSPGTIICIA-LGPDEDEKIDQITGNLKL 114

>PTH_ARCFU (O28185) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = +1

Query: 46  RAPKSLRR-WERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTV 222
           ++  SLRR W   GQ       +S E++L ++ +A+S+ L T +  DAG T++ P + T 
Sbjct: 34  KSDSSLRRKWLDEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLTEVPPGTITA 93

Query: 223 MAILGPAD--MVDDVTGGLKLL 282
           + ++GP +   +D VTG L LL
Sbjct: 94  V-VIGPDEERKIDKVTGNLPLL 114

>PTH_METMP (P61234) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 116

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +1

Query: 10  HATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAG 189
           HA++  F   Q+ +  ++  W   GQ        SE+++L +        LP  +  DAG
Sbjct: 25  HASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELLEIFKNVNIEGLPCSLIRDAG 84

Query: 190 RTQIAPNSRTVMAILGP--ADMVDDVTGGLKLL 282
           RTQI P S T + I GP   + +  V   LKLL
Sbjct: 85  RTQIEPGSLTAVGI-GPEKEEKISKVKKDLKLL 116

>PTH_METAC (Q8TKX4) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 115

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = +1

Query: 61  LRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITIDAGRTQIAPNSRTVMAILGP 240
           L +W+  GQ        + +D+  L+ +A+   LPT +  DAG T+I   + TV+ I GP
Sbjct: 41  LEKWKEGGQKKIVLRVPTIKDLYELKEKARREGLPTALIQDAGLTEIPAGTVTVLGI-GP 99

Query: 241 A--DMVDDVTGGLKLL 282
           A  +++D VT  LKL+
Sbjct: 100 AKEEVIDKVTRDLKLV 115

>V029_FOWPV (Q9J5H2) Putative peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH)|
          Length = 124

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = +1

Query: 4   CSHATLGLFKKLQQRAPKSLRRWERCGQXXXXXXXESEEDMLVLQGRAKSMNLPTHITID 183
           C H  +  ++K ++ +P  L+RW + GQ       ++E +M+ ++  A ++ +  +I  +
Sbjct: 35  CCHGAISAYEKSKKYSPDYLKRWLKNGQVKETVKVDNENEMMDIRENATAIGVNYYIVQN 94

Query: 184 AGRTQIAPNSRTVMAILGPAD--MVDDVTGGLKLL 282
             R +        + ++GPA   M + +T  LK L
Sbjct: 95  DKRQKC-----NTVLVIGPAPNYMFESLTRSLKPL 124

>RPOC_PASMU (Q9CK92) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1417

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 20/84 (23%), Positives = 34/84 (40%)
 Frame = -1

Query: 459 VKVDKTSFQTNPGRMISSKPTKPRFILHQETSGSIIACTLKNSSIALWAPMFENVEDGL* 280
           V +D          +IS+   +   I  Q  SG + A    N  I +WA   E V   + 
Sbjct: 640 VGIDDMVIPAKKYEIISAAEDEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMM 699

Query: 279 ELQTTSDIVNHVSRPKNSHDCSGI 208
           E  +T +++N   +P+     + I
Sbjct: 700 ENLSTEEVINREGQPEKQASFNSI 723

>AROC_DESPS (Q6AIP3) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 362

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -1

Query: 372 ETSGSIIACTLKNSSIALWAPMFENVE 292
           +++G I+ C ++NS + L  P++E +E
Sbjct: 205 DSTGGIVTCCIRNSPVGLGEPIYEKLE 231

>TOP1_CAMJE (Q9PLZ2) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 700

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 33  KTPTESTKVITKMGEVWPSEGGCESRKRGRYACF 134
           KT   S K +TK+GE  P  GG  + ++GR+  F
Sbjct: 557 KTKIASQKTVTKLGESCPDCGGELAIRKGRFGEF 590


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,243,933
Number of Sequences: 219361
Number of extensions: 1702916
Number of successful extensions: 4085
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4073
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)