ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags29k01 |
|---|---|
| Clone Library Name | barley_pub |
>SERA_ARATH (O04130) D-3-phosphoglycerate dehydrogenase, chloroplast precursor| (EC 1.1.1.95) (3-PGDH) Length = 624 Score = 303 bits (777), Expect = 2e-82 Identities = 146/206 (70%), Positives = 180/206 (87%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 L+PY++LAEKLGRLAVQL +GG G+++++VVY SARD DDLDTR+LRAM+TKGI+EPIS Sbjct: 406 LTPYIVLAEKLGRLAVQLASGGKGVQSIRVVYRSARDRDDLDTRLLRAMITKGIIEPISD 465 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRV 374 ++VN+VNAD++AKQ+GLRI EER+++D SPE P++SIQVQ+ NVES FAGA+SD GDI + Sbjct: 466 SYVNLVNADFIAKQKGLRISEERMVVDSSPEYPVDSIQVQILNVESNFAGAVSDAGDISI 525 Query: 375 EGKVKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSVGR 554 EGKVK G PHLT VG F VDVSLEGNLILCRQVDQPG+IG+VG+ILG N+NVNFMSVGR Sbjct: 526 EGKVKYGVPHLTCVGSFGVDVSLEGNLILCRQVDQPGMIGQVGNILGEQNVNVNFMSVGR 585 Query: 555 IAPGKQAIMAIGIDEEPEKEALKLIG 632 KQAIMAIG+DEEP+ + L+ IG Sbjct: 586 TVLRKQAIMAIGVDEEPDNKTLERIG 611
>SERA_METJA (Q58424) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 524 Score = 96.7 bits (239), Expect = 5e-20 Identities = 59/205 (28%), Positives = 107/205 (52%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 L PY++LAE LG + +Q++ G + V+++YS + D +++ KG++ PI Sbjct: 324 LKPYMLLAEMLGNIVMQVLDGS--VNRVELIYSGELAKEKTD--LIKRAFLKGLLSPILL 379 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRV 374 A +N+VNA +AK R + ++E S E N+I++ + + KF+ + Sbjct: 380 AGINLVNAPIIAKNRNINVVESST----SEEKYGNAIKITAESDKKKFS----------I 425 Query: 375 EGKVKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSVGR 554 G + + P + V + V EG L + + +D+PG IG+V LG +N+ M VGR Sbjct: 426 VGAIINNKPVILEVDGYEVSFIPEGVLAIIKHIDRPGTIGRVCITLGDYGINIASMQVGR 485 Query: 555 IAPGKQAIMAIGIDEEPEKEALKLI 629 PG +++M + +D +E ++ I Sbjct: 486 KEPGGESVMLLNLDHTVPEEVIEKI 510
>SERA_METTH (O27051) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 89.4 bits (220), Expect = 8e-18 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 2/207 (0%) Frame = +3 Query: 9 RGLSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPI 188 + L PY+ LAEK+G + Q + G I+ + V Y D IL + + I+ PI Sbjct: 323 KSLKPYIELAEKMGAIIAQALPGN--IEKLDVTYCGELAEMQFD--ILTRTMLQAILNPI 378 Query: 189 SSAFVNMVNADYVAKQRGLRIIE-ERILLDGSPEVPINSIQVQLANVESKFAGALSDDGD 365 + VN++NA +AK+RG+ + E R DG + I A A SD G Sbjct: 379 LTEPVNLINAPSIAKKRGIMVTEARRSESDGYRSIII--------------ATAESDRGG 424 Query: 366 IRVEGK-VKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFM 542 VE +K+ P + + + VDV EG +I+ R D PG IG +G+ LG +N+ M Sbjct: 425 FSVEATHIKE--PTIIGINGYRVDVKPEGTMIIARYRDLPGTIGAIGTKLGQHGINIATM 482 Query: 543 SVGRIAPGKQAIMAIGIDEEPEKEALK 623 VGR G +A+M + +D+ E ++ Sbjct: 483 QVGRKEIGGEAVMVLKVDQSVPAEVIE 509
>SERA_SYNY3 (P73821) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 554 Score = 84.7 bits (208), Expect = 2e-16 Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 2/197 (1%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 L PY+ LAE LG L QL AGG + + + + ++ A+ KG++ Sbjct: 351 LRPYLKLAETLGTLVGQL-AGGRIDRLTVCLQGDLAEYTNSQPLVVAAI--KGLLSQALR 407 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANV--ESKFAGALSDDGDI 368 VN VNA AK+RG+R+IE + D S S+ ++ E GAL +G+I Sbjct: 408 ERVNYVNAAIEAKERGIRVIETK---DASVRDYSGSLHLKATGTMGEHSATGALLSNGEI 464 Query: 369 RVEGKVKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSV 548 R+ T V F ++V ++ D PGIIGK+GS+LG+ N+N+ M V Sbjct: 465 RI-----------TDVDEFPINVPPNNYMLFTLHRDMPGIIGKIGSLLGSFNVNIASMQV 513 Query: 549 GRIAPGKQAIMAIGIDE 599 GR AIMA+ +D+ Sbjct: 514 GRKIVRGDAIMALSLDD 530
>SERA_ARCFU (O29445) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 527 Score = 77.4 bits (189), Expect = 3e-14 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 3/206 (1%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 + P++ LAEK+G++A V G I+ VKV S + T + + KG+ EPI S Sbjct: 324 MMPFLTLAEKMGKIAS--VRLGGAIRKVKVTCSGKLATKN--TEFVTRALLKGLFEPILS 379 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDG-DIR 371 +N+V+A VA +RG+ I E ++ + + ES + +G ++ Sbjct: 380 NEINLVSAKPVAVERGITIEESKV--------------ESVEHYESLLEVWVESNGKEMY 425 Query: 372 VEGKVKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSVG 551 + G + + ++V+ +G+ I+ D+PG+IG+VG++ G N+N+ M VG Sbjct: 426 LAGTCFGNEYRILKIDVYNVNFVPKGHYIISLHEDKPGVIGRVGTLFGRNNINIAGMIVG 485 Query: 552 RIA--PGKQAIMAIGIDEEPEKEALK 623 R PG +M + +D+ P E L+ Sbjct: 486 RSGDKPGGIQLMLLLVDDPPTPEVLE 511
>SERA_BACSU (P35136) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 71.6 bits (174), Expect = 2e-12 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 3/206 (1%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 + PY +A K+G L Q + A++ + A+ L+T + + G ++P Sbjct: 322 IKPYHQIAGKIGSLVSQCMKEPVQDVAIQYEGTIAK----LETSFITKALLSGFLKPRVD 377 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKF---AGALSDDGD 365 + VN VNA VAK+RG+ E+ + S N I V++ S F A + G+ Sbjct: 378 STVNEVNAGGVAKERGISFSEK---ISSSESGYDNCISVKVTGDRSTFTVTATYIPHFGE 434 Query: 366 IRVEGKVKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMS 545 VE + F++D G+L+ + D G+IG+VG ILG ++N+ M Sbjct: 435 RIVE------------INGFNIDFYPTGHLVYIQHQDTTGVIGRVGRILGDNDINIATMQ 482 Query: 546 VGRIAPGKQAIMAIGIDEEPEKEALK 623 VGR G +AIM + D E + +K Sbjct: 483 VGRKEKGGEAIMMLSFDRHLEDKIVK 508
>SERA_MYCLE (O33116) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 528 Score = 52.8 bits (125), Expect = 9e-07 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 2/198 (1%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 ++P++ L KLG L L +V V A + D ILR +G+ + Sbjct: 323 VAPWLDLVCKLGVLVAALSDELPASLSVHVRGELASE----DVEILRLSALRGLFSTVIE 378 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRV 374 V VNA +A +RG+ S E+ S +V A A SD + + Sbjct: 379 DAVTFVNAPALAAERGV-----------SAEITTGSESPNHRSVVDVRAVA-SDGSVVNI 426 Query: 375 EGKVKDG--TPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSV 548 G + + V + D+ +G ++ R VDQPG +GK+G++LG +N+ + Sbjct: 427 AGTLSGPQLVQKIVQVNGRNFDLRAQGMNLVIRYVDQPGALGKIGTLLGAAGVNIQAAQL 486 Query: 549 GRIAPGKQAIMAIGIDEE 602 G A + + +D++ Sbjct: 487 SEDTEGPGATILLRLDQD 504
>SERA_MYCTU (P0A544) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 528 Score = 48.9 bits (115), Expect = 1e-05 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 2/198 (1%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 ++P++ L KLG LA L +V+V A + + +LR +G+ + Sbjct: 323 VAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAE----EVEVLRLSALRGLFSAVIE 378 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRV 374 V VNA +A +RG + E SP + V+ + GA D + V Sbjct: 379 DAVTFVNAPALAAERG--VTAEICKASESPN--------HRSVVDVRAVGA--DGSVVTV 426 Query: 375 EGKVKDG--TPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSV 548 G + + + + D+ +G ++ VD+PG +GK+G++LGT +N+ + Sbjct: 427 SGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQL 486 Query: 549 GRIAPGKQAIMAIGIDEE 602 A G A + + +D++ Sbjct: 487 SEDAEGPGATILLRLDQD 504
>SERA_MYCBO (P0A545) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 528 Score = 48.9 bits (115), Expect = 1e-05 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 2/198 (1%) Frame = +3 Query: 15 LSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISS 194 ++P++ L KLG LA L +V+V A + + +LR +G+ + Sbjct: 323 VAPWLDLVRKLGVLAGVLSDELPVSLSVQVRGELAAE----EVEVLRLSALRGLFSAVIE 378 Query: 195 AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRV 374 V VNA +A +RG + E SP + V+ + GA D + V Sbjct: 379 DAVTFVNAPALAAERG--VTAEICKASESPN--------HRSVVDVRAVGA--DGSVVTV 426 Query: 375 EGKVKDG--TPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVGSILGTMNLNVNFMSV 548 G + + + + D+ +G ++ VD+PG +GK+G++LGT +N+ + Sbjct: 427 SGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQL 486 Query: 549 GRIAPGKQAIMAIGIDEE 602 A G A + + +D++ Sbjct: 487 SEDAEGPGATILLRLDQD 504
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 33.1 bits (74), Expect = 0.70 Identities = 32/125 (25%), Positives = 46/125 (36%) Frame = -1 Query: 505 DPTLPMMPGWSTCRQSIRLPSRLTSTLKGPTSVRCGVPSLTFPSTLISPSSDNAPANLDS 326 +PT + ST S TST TS S + ST SPSS + ++L S Sbjct: 180 NPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTS 239 Query: 325 TLASWTWIEFIGTSGEPXXXXXXXXXXSPLCLAT*SAFTMLTNALEMGSTMPFVTMARRI 146 T +S T TS S +T ++ + + + ST + T Sbjct: 240 TSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPS 299 Query: 145 LVSKS 131 L S S Sbjct: 300 LTSSS 304 Score = 30.0 bits (66), Expect = 6.0 Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 6/148 (4%) Frame = -1 Query: 460 SIRLPSRLTSTLKGPTSVRCGVPSL----TFPS-TLISPSSDNAPANLDSTLASWTWIEF 296 S + S +TSTL TS SL T PS T SPSS + ++ ST +S T Sbjct: 162 SASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSS 221 Query: 295 IGTSGEPXXXXXXXXXXSPLCLAT*SAFTMLTNALEMGSTMPFVTMARRILVSKSSGSLA 116 TS P S +T ++ + + + ST P T S S S + Sbjct: 222 SSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKS 281 Query: 115 DEXXXXXXXXXXXXXT-SCTARRPNFSA 35 + S T+ P ++ Sbjct: 282 TSASSTSTSSYSTSTSPSLTSSSPTLAS 309
>CADH7_HUMAN (Q9ULB5) Cadherin-7 precursor| Length = 785 Score = 32.0 bits (71), Expect = 1.6 Identities = 43/180 (23%), Positives = 72/180 (40%), Gaps = 25/180 (13%) Frame = +3 Query: 57 AVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVE--PISSAFVNMVNADY-- 224 A +V G+ V + D +D R R + E P++S + AD Sbjct: 232 AKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLPVASVVARIKAADADI 291 Query: 225 ---------VAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRVE 377 + GL I +I +D + I +IQ +L + E+K + L R+E Sbjct: 292 GANAEMEYKIVDGDGLGIF--KISVDKETQEGIITIQKEL-DFEAKTSYTL------RIE 342 Query: 378 GKVKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIG------------KVGSILGTM 521 KD P +GPFS +++ I+ VD+P + +VG+I+GT+ Sbjct: 343 AANKDADPRFLSLGPFSDTTTVK---IIVEDVDEPPVFSSPLYPMEVSEATQVGNIIGTV 399
>NRBF2_RAT (Q9QYK3) Nuclear receptor-binding factor 2 (NRBF-2)| Length = 287 Score = 31.2 bits (69), Expect = 2.7 Identities = 27/95 (28%), Positives = 43/95 (45%) Frame = -3 Query: 518 RPENRSHLADDARLVDLPAEYQVALKANIDTERPDKCEMRRAILNLPLHSDITVVR*RTG 339 R EN+ A+ ARL+ PAE ++ ++D + +K E + LP HSD Sbjct: 193 RKENKQLKAEKARLLKGPAEKEL----DVDADFVEKSE----LWGLPPHSDTATASSTWQ 244 Query: 338 ELGLHIGKLDLDRVYRDLRGAVEENPLLDYPEPSL 234 + + GK +D+ + P LD+P P L Sbjct: 245 KFAANTGKA------KDI--PIPNLPPLDFPSPEL 271
>BPAEA_MOUSE (Q91ZU8) Bullous pemphigoid antigen 1, isoform 5 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) Length = 2611 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +3 Query: 159 MVTKGIVEPISS---AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVE 329 +V GI P+S+ + V VNA+ ++K+ G+R +E + L G E + S +L E Sbjct: 2483 LVITGISHPVSNKMMSVVEAVNANIISKEMGMRCLEFQYLTGGLIEPKVFS---RLTIEE 2539 Query: 330 SKFAGALSDDGDIRVEGKVKD 392 + G + D+ + ++KD Sbjct: 2540 ALHVGII----DVLIATRLKD 2556
>LPQT_MYCTU (P96384) Putative lipoprotein lpqT precursor| Length = 226 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 415 TSVRCGVPSLTFPSTL-ISPSSDNAPANLDSTLASWTWIEFIGTSGEP 275 ++V CG S F S L SP++ + + W ++E +G +GEP Sbjct: 26 SAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPLWKYLESVGVTGEP 73
>SLIK6_MOUSE (Q8C110) SLIT and NTRK-like protein 6 precursor| Length = 840 Score = 30.4 bits (67), Expect = 4.6 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Frame = -1 Query: 568 FPGAILPTLIKLTFRFIVP----RIDPTLPMMPGWSTCRQSIRLPSRLTSTLKGPTSVRC 401 F G++L L K +F P DP+ ++ S+ S RL S+ TS LK PT Sbjct: 253 FKGSVLSRLKKESFCPTPPVYEEHEDPSGSLLAITSSTSDS-RLSSKNTSILKQPTKAPG 311 Query: 400 GVPSLTFPSTLISPSSDNAPAN 335 +P LT PST + P N Sbjct: 312 LIPYLTKPSTQLPVPYCPIPCN 333
>LPQT_MYCBO (Q7U0V0) Putative lipoprotein lpqT precursor| Length = 252 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -1 Query: 415 TSVRCGVPSLTFPSTL-ISPSSDNAPANLDSTLASWTWIEFIGTSGEP 275 ++V CG S F S L SP++ + + W ++E +G +GEP Sbjct: 26 SAVACGPKSPDFQSILSTSPTTSAVSTTTEVPVPLWKYLESVGVTGEP 73
>BPAEB_MOUSE (Q60824) Bullous pemphigoid antigen 1, isoforms 6/7 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) (Fragments) Length = 1678 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%) Frame = +3 Query: 159 MVTKGIVEPISS---AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVE 329 +V GI P+S+ + V VNA+ ++K+ G+R +E + L G E + S +L E Sbjct: 1550 LVITGISHPVSNKMMSVVEAVNANIISKEMGMRCLEFQYLTGGLIEPKVFS---RLTIEE 1606 Query: 330 SKFAGALSDDGDIRVEGKVKD 392 + G + D+ + ++KD Sbjct: 1607 ALHVGII----DVLIATRLKD 1623
>BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8 (230 kDa| bullous pemphigoid antigen) (BPA) (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) (Fragment) Length = 3214 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Frame = +3 Query: 159 MVTKGIVEPISS---AFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVE 329 +V GI PI++ + V VNA+ + K+ G+R +E + L G E ++S +L+ E Sbjct: 3087 LVITGIGHPITNKMMSVVEAVNANIINKEMGIRCLEFQYLTGGLIEPQVHS---RLSIEE 3143 Query: 330 SKFAGALSDDGDIRVEGKVKD 392 + G + D+ + K+KD Sbjct: 3144 ALQVGII----DVLIATKLKD 3160
>METE_SHIFL (Q83IW0) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 753 Score = 30.0 bits (66), Expect = 6.0 Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 6/143 (4%) Frame = -3 Query: 620 ECFLLRLLINPNGHDGLLPWSNPSNAHKVDIQVHRPENRSHLADDARLVDLPAEYQVALK 441 E LLR +N L WS P A + +VH P A + RL + A Q + + Sbjct: 355 ELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNP------AVEKRLAAITA--QDSQR 406 Query: 440 ANIDTERPDKCEMRRAILNLPLHSDITV------VR*RTGELGLHIGKLDLDRVYRDLRG 279 AN+ R E +RA LP T+ RT L G LD + + R Sbjct: 407 ANVYEVR---AEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDAN----NYRT 459 Query: 278 AVEENPLLDYPEPSLLGNIVSIH 210 + E+ E LG V +H Sbjct: 460 GIAEHIKQAIVEQERLGLDVLVH 482
>DAPB_VIBPA (Q87SF5) Dihydrodipicolinate reductase (EC 1.3.1.26) (DHPR)| Length = 269 Score = 30.0 bits (66), Expect = 6.0 Identities = 27/100 (27%), Positives = 43/100 (43%) Frame = +3 Query: 204 NMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGALSDDGDIRVEGK 383 N+V A ++ + ER PE + + + E KF L+DD + V+ Sbjct: 16 NLVKASHINPDASVTAGSER------PESSLVGVDIGELCGEGKFDVFLTDDLEKEVD-- 67 Query: 384 VKDGTPHLTLVGPFSVDVSLEGNLILCRQVDQPGIIGKVG 503 + +V F+V VS NL LC+Q + +IG G Sbjct: 68 ------NFDVVIDFTVPVSTLANLELCKQHGKSIVIGTTG 101
>CI096_HUMAN (Q8NE28) Protein kinase-like protein C9orf96| Length = 680 Score = 30.0 bits (66), Expect = 6.0 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 1/134 (0%) Frame = +3 Query: 9 RGLSPYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPI 188 RGL+ V ++E V GGSG+ +K Y RD + +VE + Sbjct: 568 RGLASLVKVSELAAFKVVVQEEGGSGLSLIKETYQLHRDDPE-------------VVENV 614 Query: 189 SSAFVNMVNADYVAKQRGLRIIEERILLDGSPEVPINSIQVQLANVESKFAGAL-SDDGD 365 V++ A Y E IL PE+ +S++ L ++ +F +L SD Sbjct: 615 GMLLVHL--ASY-----------EEIL----PELVSSSMKALLQEIKERFTSSLVSDSSA 657 Query: 366 IRVEGKVKDGTPHL 407 G G+P L Sbjct: 658 FSKPGLPPGGSPQL 671
>METE_ECOLI (P25665) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 752 Score = 30.0 bits (66), Expect = 6.0 Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 6/143 (4%) Frame = -3 Query: 620 ECFLLRLLINPNGHDGLLPWSNPSNAHKVDIQVHRPENRSHLADDARLVDLPAEYQVALK 441 E LLR +N L WS P A + +VH P A + RL + A Q + + Sbjct: 354 ELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNP------AVEKRLAAITA--QDSQR 405 Query: 440 ANIDTERPDKCEMRRAILNLPLHSDITV------VR*RTGELGLHIGKLDLDRVYRDLRG 279 AN+ R E +RA LP T+ RT L G LD + + R Sbjct: 406 ANVYEVR---AEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDAN----NYRT 458 Query: 278 AVEENPLLDYPEPSLLGNIVSIH 210 + E+ E LG V +H Sbjct: 459 GIAEHIKQAIVEQERLGLDVLVH 481
>METE_ECOL6 (Q8FBM1) 5-methyltetrahydropteroyltriglutamate--homocysteine| methyltransferase (EC 2.1.1.14) (Methionine synthase, vitamin-B12 independent isozyme) (Cobalamin-independent methionine synthase) Length = 752 Score = 30.0 bits (66), Expect = 6.0 Identities = 40/143 (27%), Positives = 55/143 (38%), Gaps = 6/143 (4%) Frame = -3 Query: 620 ECFLLRLLINPNGHDGLLPWSNPSNAHKVDIQVHRPENRSHLADDARLVDLPAEYQVALK 441 E LLR +N L WS P A + +VH P A + RL + A Q + + Sbjct: 354 ELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNP------AVEKRLAAITA--QDSQR 405 Query: 440 ANIDTERPDKCEMRRAILNLPLHSDITV------VR*RTGELGLHIGKLDLDRVYRDLRG 279 AN+ R E +RA LP T+ RT L G LD + + R Sbjct: 406 ANVYEVR---AEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDAN----NYRT 458 Query: 278 AVEENPLLDYPEPSLLGNIVSIH 210 + E+ E LG V +H Sbjct: 459 GIAEHIKQAIVEQERLGLDVLVH 481
>HIS2_GEOMG (Q39YP1) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 109 Score = 30.0 bits (66), Expect = 6.0 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 14/67 (20%) Frame = +3 Query: 33 LAEKLGRLAVQLVAGGSGIKAVKVVYSSAR--------------DPDDLDTRILRAMVTK 170 + +KLG A ++V G G K ++VY +A DP+++ + R T Sbjct: 39 ILKKLGEEATEVVIAGKGGKREEIVYETADLFFHTLVLLGYYDIDPEEIYAELRRRFGTS 98 Query: 171 GIVEPIS 191 GI E S Sbjct: 99 GIAEKAS 105
>ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin,| nonerythroid) Length = 3924 Score = 29.6 bits (65), Expect = 7.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -3 Query: 512 ENRSHLADDARLVDLPAEYQVALKANIDTERPDKCE 405 ++ SHLA+D V AE + K N DT++P C+ Sbjct: 2705 DSESHLAEDRHAVSTEAEDRSYDKLNRDTDQPKICD 2740
>SERA_RAT (O08651) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 29.6 bits (65), Expect = 7.8 Identities = 26/91 (28%), Positives = 39/91 (42%) Frame = +3 Query: 21 PYVILAEKLGRLAVQLVAGGSGIKAVKVVYSSARDPDDLDTRILRAMVTKGIVEPISSAF 200 P++ LAE LG L + A K V + + T + A++ + E A Sbjct: 330 PWIGLAEALGTL---MHAWAGSPKGTIQVVTQGTSLKNAGTCLSPAVIVGLLREASKQAD 386 Query: 201 VNMVNADYVAKQRGLRIIEERILLDGSPEVP 293 VN+VNA + K+ GL + SP VP Sbjct: 387 VNLVNAKLLVKEAGLNVTTSH-----SPGVP 412
>CP11A_ONCMY (Q07217) Cytochrome P450 11A1, mitochondrial precursor (EC| 1.14.15.6) (CYPXIA1) (P450(SCC)) (Cholesterol side-chain cleavage enzyme) (Cholesterol desmolase) Length = 514 Score = 29.6 bits (65), Expect = 7.8 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Frame = -1 Query: 490 MMPGWSTCRQSIRLPSRLTSTLKGPTSVRCGVPSLTFPSTL------ISPSSDNAPANLD 329 MM WS CR S+ LP+ CG+PS S++ +SP + + N Sbjct: 1 MMVSWSVCRSSLALPA-------------CGLPSARHNSSMPVVRQALSPDNSSTVQNFS 47 Query: 328 STLASW 311 W Sbjct: 48 EIPGLW 53
>LYAM3_BOVIN (P42201) P-selectin precursor (Granule membrane protein 140)| (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (CD62P antigen) Length = 646 Score = 29.6 bits (65), Expect = 7.8 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 392 WHAASHTCRAFQCRC*P*GQPDTLPASRPAGHHRQG 499 W AA+ TCRA +C P +P + S P G+ G Sbjct: 508 WTAAAPTCRAVKCAKLPVTEPIVMNCSNPWGNFSYG 543 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,685,853 Number of Sequences: 219361 Number of extensions: 1960102 Number of successful extensions: 6234 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 6038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6220 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
